Ppig (peptidylprolyl isomerase G) - Rat Genome Database

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Pathways
Gene: Ppig (peptidylprolyl isomerase G) Rattus norvegicus
Analyze
Symbol: Ppig
Name: peptidylprolyl isomerase G
RGD ID: 620315
Description: Enables peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding. Located in nuclear matrix. Orthologous to human PPIG (peptidylprolyl isomerase G); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cyclophilin G; matrin cyclophilin (matrin-cyp); matrin-cyp; peptidyl-prolyl cis-trans isomerase G; peptidyl-prolyl isomerase G; PPIase G; rotamase G
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8374,891,846 - 74,923,010 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl374,891,846 - 74,920,750 (+)EnsemblGRCr8
mRatBN7.2354,484,023 - 54,512,929 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl354,484,023 - 54,512,926 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx357,884,329 - 57,913,330 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0366,467,923 - 66,496,924 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0364,230,295 - 64,259,295 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0355,959,756 - 55,990,040 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl355,960,067 - 55,988,968 (+)Ensemblrn6Rnor6.0
Rnor_5.0362,571,744 - 62,600,516 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4351,866,989 - 51,895,893 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera354,044,534 - 54,073,434 (+)NCBICelera
RGSC_v3.1351,763,360 - 51,792,262 (+)NCBI
Cytogenetic Map3q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acetylsalicylic acid  (ISO)
allethrin  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
asbestos  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chloroacetaldehyde  (ISO)
chloroprene  (EXP)
chlorpyrifos  (ISO)
chrysene  (ISO)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
cyhalothrin  (EXP)
cypermethrin  (EXP)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
genistein  (EXP)
ifosfamide  (ISO)
ivermectin  (ISO)
methimazole  (EXP)
N(6)-dimethylallyladenine  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pyrethrins  (EXP)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenate  (ISO)
Soman  (EXP)
sunitinib  (ISO)
testosterone enanthate  (ISO)
tetraphene  (ISO)
trichloroethene  (EXP)
triptonide  (ISO)
valproic acid  (EXP,ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
nuclear matrix  (IDA,IEA)
nuclear speck  (IEA,ISO)
nucleus  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Spliceosomal immunophilins. Mesa A, etal., FEBS Lett. 2008 Jul 9;582(16):2345-51. doi: 10.1016/j.febslet.2008.06.006. Epub 2008 Jun 9.
4. Matrin CYP, an SR-rich cyclophilin that associates with the nuclear matrix and splicing factors. Mortillaro MJ and Berezney R, J Biol Chem 1998 Apr 3;273(14):8183-92.
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:16641100   PMID:20676357   PMID:22658674   PMID:22681889  


Genomics

Comparative Map Data
Ppig
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8374,891,846 - 74,923,010 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl374,891,846 - 74,920,750 (+)EnsemblGRCr8
mRatBN7.2354,484,023 - 54,512,929 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl354,484,023 - 54,512,926 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx357,884,329 - 57,913,330 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0366,467,923 - 66,496,924 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0364,230,295 - 64,259,295 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0355,959,756 - 55,990,040 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl355,960,067 - 55,988,968 (+)Ensemblrn6Rnor6.0
Rnor_5.0362,571,744 - 62,600,516 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4351,866,989 - 51,895,893 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera354,044,534 - 54,073,434 (+)NCBICelera
RGSC_v3.1351,763,360 - 51,792,262 (+)NCBI
Cytogenetic Map3q21NCBI
PPIG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382169,584,351 - 169,641,406 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2169,584,342 - 169,641,408 (+)Ensemblhg38GRCh38
GRCh372170,440,861 - 170,497,916 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362170,149,096 - 170,202,500 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342170,266,356 - 170,319,760NCBI
Celera2164,059,707 - 164,113,097 (+)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2162,331,355 - 162,384,738 (+)NCBIHuRef
CHM1_12170,447,258 - 170,500,644 (+)NCBICHM1_1
T2T-CHM13v2.02170,060,945 - 170,118,571 (+)NCBIT2T-CHM13v2.0
Ppig
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39269,553,152 - 69,584,356 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl269,552,889 - 69,584,356 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38269,722,753 - 69,754,059 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl269,722,545 - 69,754,012 (+)Ensemblmm10GRCm38
MGSCv37269,561,145 - 69,592,116 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36269,514,062 - 69,554,898 (+)NCBIMGSCv36mm8
Celera271,392,470 - 71,423,440 (+)NCBICelera
Cytogenetic Map2C2NCBI
cM Map240.95NCBI
Ppig
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554494,915,753 - 4,958,220 (-)Ensembl
ChiLan1.0NW_0049554494,915,747 - 4,958,456 (-)NCBIChiLan1.0ChiLan1.0
PPIG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21372,242,553 - 72,296,012 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B72,257,531 - 72,310,985 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B56,854,219 - 56,911,325 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B174,322,609 - 174,379,281 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B174,322,828 - 174,379,281 (+)EnsemblpanPan2panpan1.1
PPIG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13614,306,458 - 14,357,757 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3614,307,160 - 14,353,412 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3614,316,783 - 14,363,731 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03614,423,108 - 14,470,046 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3614,423,798 - 14,469,822 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13614,506,556 - 14,553,473 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03614,497,070 - 14,544,595 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03614,608,716 - 14,655,769 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ppig
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303131,563,691 - 131,621,326 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936509117,921 - 172,100 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936509117,613 - 172,109 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPIG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1575,940,865 - 75,979,164 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11575,940,397 - 75,979,168 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21585,061,430 - 85,095,641 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPIG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11055,108,981 - 55,166,974 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666040144,360,535 - 144,423,417 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppig
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247877,128,344 - 7,175,172 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247877,128,348 - 7,179,041 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Ppig
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1547,023,149 - 47,051,713 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ppig
416 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:207
Count of miRNA genes:131
Interacting mature miRNAs:163
Transcripts:ENSRNOT00000010216
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)351490129111359995Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)373592611110333156Rat
1358293Bw38Body weight QTL 3860.0000031body mass (VT:0001259)body weight (CMO:0000012)374364268119364268Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1331795Rf30Renal function QTL 303.708urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)35986366387321459Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)35365182698651826Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)34887661993876619Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)34887661993876619Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)33540319997383526Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)34790417292904172Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1331777Bw24Body weight QTL 243.503body mass (VT:0001259)body weight (CMO:0000012)35986366387321459Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35109256196092561Rat
1300169Bp177Blood pressure QTL 1772.96arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)33642511681425116Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)34865774493657744Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)33779691982796919Rat
2302276Bw82Body weight QTL 824.32body mass (VT:0001259)body weight (CMO:0000012)35986366383358329Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)358925062103925062Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)370311536115311536Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)34865774493657744Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)35076614595766145Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)35109256196092561Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)336721849110333156Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)35076614595766145Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)34865774493657744Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
1582249Bw77Body weight QTL 773.20.0025epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)37359251285062403Rat
2325840Bp345Blood pressure QTL 3450.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)33870893183708931Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)34865774493657744Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)33736373482363734Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)33610140381101403Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)34865774493657744Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat

Markers in Region
RH144287  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map20464.8UniSTS
Cytogenetic Map3q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001431479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_031793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006234335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017592063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017592064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF043642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000010216   ⟹   ENSRNOP00000010216
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl374,891,846 - 74,920,750 (+)Ensembl
mRatBN7.2 Ensembl354,484,023 - 54,512,926 (+)Ensembl
Rnor_6.0 Ensembl355,960,067 - 55,988,968 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086584   ⟹   ENSRNOP00000073367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl355,960,327 - 55,987,872 (+)Ensembl
RefSeq Acc Id: NM_031793   ⟹   NP_113981
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,846 - 74,920,750 (+)NCBI
mRatBN7.2354,484,023 - 54,512,929 (+)NCBI
Rnor_6.0355,960,067 - 55,988,971 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
RGSC_v3.4351,866,989 - 51,895,893 (+)RGD
Celera354,044,534 - 54,073,434 (+)RGD
Sequence:
RefSeq Acc Id: XM_006234324   ⟹   XP_006234386
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,914 - 74,923,010 (+)NCBI
mRatBN7.2354,484,091 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234325   ⟹   XP_006234387
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,892,264 - 74,923,010 (+)NCBI
mRatBN7.2354,484,443 - 54,511,837 (+)NCBI
Rnor_6.0355,960,280 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234326   ⟹   XP_006234388
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,913 - 74,923,010 (+)NCBI
mRatBN7.2354,484,093 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234327   ⟹   XP_006234389
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,914 - 74,923,010 (+)NCBI
mRatBN7.2354,484,065 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234328   ⟹   XP_006234390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,862 - 74,923,010 (+)NCBI
mRatBN7.2354,484,039 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234330   ⟹   XP_006234392
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,892,264 - 74,923,010 (+)NCBI
mRatBN7.2354,484,283 - 54,511,837 (+)NCBI
Rnor_6.0355,960,280 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234331   ⟹   XP_006234393
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,863 - 74,923,010 (+)NCBI
mRatBN7.2354,484,038 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234333   ⟹   XP_006234395
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,914 - 74,923,010 (+)NCBI
mRatBN7.2354,484,091 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234334   ⟹   XP_006234396
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,892,264 - 74,923,010 (+)NCBI
mRatBN7.2354,484,443 - 54,511,837 (+)NCBI
Rnor_6.0355,960,280 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234335   ⟹   XP_006234397
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,861 - 74,923,010 (+)NCBI
mRatBN7.2354,484,038 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Rnor_5.0362,571,744 - 62,600,516 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017592063   ⟹   XP_017447552
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,914 - 74,923,010 (+)NCBI
mRatBN7.2354,484,091 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017592064   ⟹   XP_017447553
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,878 - 74,923,010 (+)NCBI
mRatBN7.2354,484,039 - 54,511,837 (+)NCBI
Rnor_6.0355,959,756 - 55,990,040 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039105945   ⟹   XP_038961873
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,892,263 - 74,923,010 (+)NCBI
mRatBN7.2354,484,443 - 54,511,837 (+)NCBI
RefSeq Acc Id: XM_063284657   ⟹   XP_063140727
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,892,264 - 74,923,010 (+)NCBI
RefSeq Acc Id: XM_063284658   ⟹   XP_063140728
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,891,862 - 74,923,010 (+)NCBI
RefSeq Acc Id: XM_063284660   ⟹   XP_063140730
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8374,901,106 - 74,923,010 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001418408 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418409 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418410 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418411 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418412 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418413 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418414 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418415 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418416 (Get FASTA)   NCBI Sequence Viewer  
  NP_001418417 (Get FASTA)   NCBI Sequence Viewer  
  NP_113981 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234386 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234387 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234388 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234389 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234390 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234392 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234393 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234395 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234396 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234397 (Get FASTA)   NCBI Sequence Viewer  
  XP_017447552 (Get FASTA)   NCBI Sequence Viewer  
  XP_017447553 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961873 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140727 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140728 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140730 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC00191 (Get FASTA)   NCBI Sequence Viewer  
  AAH85723 (Get FASTA)   NCBI Sequence Viewer  
  EDL79062 (Get FASTA)   NCBI Sequence Viewer  
  EDL79063 (Get FASTA)   NCBI Sequence Viewer  
  EDL79064 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000010216
GenBank Protein O55035 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_113981   ⟸   NM_031793
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot),   G3V6Y9 (UniProtKB/TrEMBL),   A6HM13 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234386   ⟸   XM_006234324
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234388   ⟸   XM_006234326
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234389   ⟸   XM_006234327
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234395   ⟸   XM_006234333
- Peptide Label: isoform X1
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot),   G3V6Y9 (UniProtKB/TrEMBL),   A6HM13 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234390   ⟸   XM_006234328
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234393   ⟸   XM_006234331
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234397   ⟸   XM_006234335
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234387   ⟸   XM_006234325
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234392   ⟸   XM_006234330
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006234396   ⟸   XM_006234334
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017447552   ⟸   XM_017592063
- Peptide Label: isoform X1
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot),   G3V6Y9 (UniProtKB/TrEMBL),   A6HM13 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017447553   ⟸   XM_017592064
- Peptide Label: isoform X1
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot),   G3V6Y9 (UniProtKB/TrEMBL),   A6HM13 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000010216   ⟸   ENSRNOT00000010216
Ensembl Acc Id: ENSRNOP00000073367   ⟸   ENSRNOT00000086584
RefSeq Acc Id: XP_038961873   ⟸   XM_039105945
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063140728   ⟸   XM_063284658
- Peptide Label: isoform X1
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot),   A6HM13 (UniProtKB/TrEMBL),   G3V6Y9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140727   ⟸   XM_063284657
- Peptide Label: isoform X1
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot),   A6HM13 (UniProtKB/TrEMBL),   G3V6Y9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140730   ⟸   XM_063284660
- Peptide Label: isoform X2
- UniProtKB: Q5U346 (UniProtKB/Swiss-Prot),   O55035 (UniProtKB/Swiss-Prot)
Protein Domains
PPIase cyclophilin-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O55035-F1-model_v2 AlphaFold O55035 1-752 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692118
Promoter ID:EPDNEW_R2643
Type:initiation region
Name:Ppig_2
Description:peptidylprolyl isomerase G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R2645  EPDNEW_R2644  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0355,960,133 - 55,960,193EPDNEW
RGD ID:13692129
Promoter ID:EPDNEW_R2644
Type:initiation region
Name:Ppig_3
Description:peptidylprolyl isomerase G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R2643  EPDNEW_R2645  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0355,960,313 - 55,960,373EPDNEW
RGD ID:13692122
Promoter ID:EPDNEW_R2645
Type:multiple initiation site
Name:Ppig_1
Description:peptidylprolyl isomerase G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R2643  EPDNEW_R2644  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0355,960,526 - 55,960,586EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620315 AgrOrtholog
BioCyc Gene G2FUF-49503 BioCyc
Ensembl Genes ENSRNOG00000007673 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000010216 ENTREZGENE
Gene3D-CATH 2.40.100.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7123868 IMAGE-MGC_LOAD
InterPro Cyclophilin-like_dom_sf UniProtKB/Swiss-Prot
  Cyclophilin-type_PPIase_CS UniProtKB/Swiss-Prot
  Cyclophilin-type_PPIase_dom UniProtKB/Swiss-Prot
KEGG Report rno:83624 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93333 IMAGE-MGC_LOAD
NCBI Gene 83624 ENTREZGENE
PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE UniProtKB/Swiss-Prot
  PEPTIDYL-PROLYL CIS-TRANS ISOMERASE G UniProtKB/Swiss-Prot
Pfam Pro_isomerase UniProtKB/Swiss-Prot
PhenoGen Ppig PhenoGen
PRINTS CSAPPISMRASE UniProtKB/Swiss-Prot
PROSITE CSA_PPIASE_1 UniProtKB/Swiss-Prot
  CSA_PPIASE_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000007673 RatGTEx
Superfamily-SCOP SSF50891 UniProtKB/Swiss-Prot
UniProt A6HM13 ENTREZGENE, UniProtKB/TrEMBL
  G3V6Y9 ENTREZGENE, UniProtKB/TrEMBL
  O55035 ENTREZGENE, UniProtKB/Swiss-Prot
  Q5U346 ENTREZGENE
UniProt Secondary Q5U346 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-01-20 Ppig  peptidylprolyl isomerase G    matrin cyclophilin (matrin-cyp)  Name updated 1299863 APPROVED
2002-08-07 Ppig  matrin cyclophilin (matrin-cyp)      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localizes in the nucleus, and nuclear matrix 633708
gene_process may fucntion as molecular chaperone involved in the dynamic regulation of the nuclear speckle domains 633708
gene_process may mediate nuclear architecture for coupling transcription and RNA splicing in the cell nucleus 633708
gene_protein 752 amino acids; 88 kDa 633708