Imported Disease Annotations - ClinVarObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Tnfsf4 | Rat | 1q24 Deletion Syndrome | | ISO | TNFSF4 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: 1q24q25 microdeletion syndrome | ClinVar | PMID:21548129 more ... | Tnfsf4 | Rat | antithrombin III deficiency | | ISO | TNFSF4 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Hereditary antithrombin deficiency | ClinVar | | Tnfsf4 | Rat | autoimmune lymphoproliferative syndrome | | ISO | TNFSF4 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME more ... | ClinVar | PMID:22857792 more ... | Tnfsf4 | Rat | gastrointestinal stromal tumor | | ISO | TNFSF4 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Gastrointestinal stromal tumor | ClinVar | PMID:28492532 | Tnfsf4 | Rat | parathyroid carcinoma | | ISO | TNFSF4 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Parathyroid carcinoma | ClinVar | PMID:28492532 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Imported Disease Annotations - CTD
Imported Disease Annotations - MGI
Imported Disease Annotations - OMIM
Gene-Chemical Interaction Annotations Click to see Annotation Detail View
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Molecular Pathway Annotations Click to see Annotation Detail View
Imported Annotations - KEGG (archival)
Phenotype Annotations Click to see Annotation Detail View
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References
References - curated
| # | Reference Title | Reference Citation |
| 1. | Identification of rat OX40 ligand by molecular cloning. | Akiba H, etal., Biochem Biophys Res Commun 1998 Oct 9;251(1):131-6. |
| 2. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 3. | Revenue sharing: source of more program funds for the disabled and others. | Hammer P and Uhlman TM, Soc Rehabil Rec 1975 Jul-Aug;2(6):28-32. |
| 4. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
| 5. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
| 6. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
| 7. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
| 8. | GOA pipeline | RGD automated data pipeline |
| 9. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
| 10. | Characterization of rat OX40 ligand by monoclonal antibody. | Satake Y, etal., Biochem Biophys Res Commun. 2000 Apr 21;270(3):1041-8. |
| 11. | Positional identification of TNFSF4, encoding OX40 ligand, as a gene that influences atherosclerosis susceptibility. | Wang X, etal., Nat Genet. 2005 Apr;37(4):365-72. Epub 2005 Mar 6. |
| 12. | The role of the CD134-CD134 ligand costimulatory pathway in alloimmune responses in vivo. | Yuan X, etal., J Immunol. 2003 Mar 15;170(6):2949-55. |
| 13. | Negative immune factors might predominate local tumor immune status and promote carcinogenesis in cervical carcinoma. | Zhao M, etal., Virol J. 2017 Jan 13;14(1):5. doi: 10.1186/s12985-016-0670-8. |
Additional References at PubMed
| PMID:3473481 | PMID:7749983 | PMID:9670042 | PMID:12355440 | PMID:12496423 | PMID:14635034 | PMID:15376196 | PMID:16670306 | PMID:17166734 | PMID:17785785 | PMID:18354165 | PMID:18397322 |
| PMID:18501882 | PMID:18713990 | PMID:19029446 | PMID:20639485 | PMID:20659336 | PMID:20844189 | PMID:20871162 | PMID:26646413 |
Genomics
Comparative Map Data
| Tnfsf4 (Rattus norvegicus - Norway rat) |
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| TNFSF4 (Homo sapiens - human) |
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| Tnfsf4 (Mus musculus - house mouse) |
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| Tnfsf4 (Chinchilla lanigera - long-tailed chinchilla) |
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| TNFSF4 (Pan paniscus - bonobo/pygmy chimpanzee) |
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| TNFSF4 (Canis lupus familiaris - dog) |
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| Tnfsf4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| TNFSF4 (Sus scrofa - pig) |
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| TNFSF4 (Chlorocebus sabaeus - green monkey) |
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| Tnfsf4 (Heterocephalus glaber - naked mole-rat) |
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Variants
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Variants in Tnfsf4
142 total Variants 
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