Tcea2 (transcription elongation factor A2) - Rat Genome Database

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Gene: Tcea2 (transcription elongation factor A2) Rattus norvegicus
Analyze
Symbol: Tcea2
Name: transcription elongation factor A2
RGD ID: 61825
Description: Predicted to enable DNA binding activity and zinc ion binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human TCEA2 (transcription elongation factor A2); PARTICIPATES IN RNA polymerase II transcription elongation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: testis-specific S-II; transcription elongation factor A (SII) 2; transcription elongation factor A (SII), 2; transcription elongation factor A protein 2; transcription elongation factor S-II protein 2; transcription elongation factor TFIIS.l
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83189,173,756 - 189,181,633 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3189,165,603 - 189,182,540 (+)EnsemblGRCr8
mRatBN7.23168,796,244 - 168,804,125 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3168,796,331 - 168,804,116 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3173,175,741 - 173,183,550 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03182,134,832 - 182,142,641 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03178,797,259 - 178,805,065 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03177,187,686 - 177,195,898 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3177,188,044 - 177,195,894 (+)Ensemblrn6Rnor6.0
Rnor_5.03180,896,548 - 180,904,402 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43170,831,286 - 170,839,091 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3163,783,634 - 163,791,446 (-)NCBICelera
RGSC_v3.13170,737,321 - 170,745,127 (+)NCBI
Cytogenetic Map3q43NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(2,4,5-trichlorophenoxy)acetic acid  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
acrylamide  (ISO)
aldrin  (ISO)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
calcitriol  (ISO)
chenodeoxycholic acid  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
folic acid  (ISO)
gentamycin  (EXP)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
indometacin  (ISO)
isobutanol  (ISO)
L-methionine  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
nickel atom  (ISO)
obeticholic acid  (ISO)
okadaic acid  (ISO)
paracetamol  (EXP,ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
quercitrin  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA,ISO)
nucleus  (IBA,IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Control of transcriptional elongation. Kwak H and Lis JT, Annu Rev Genet. 2013;47:483-508. doi: 10.1146/annurev-genet-110711-155440. Epub 2013 Sep 11.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Comprehensive gene review and curation RGD comprehensive gene curation
10. Cloning and identification of testis-specific transcription elongation factor S-II. Xu Q, etal., J Biol Chem 1994 Jan 28;269(4):3100-3.

Genomics

Comparative Map Data
Tcea2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83189,173,756 - 189,181,633 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3189,165,603 - 189,182,540 (+)EnsemblGRCr8
mRatBN7.23168,796,244 - 168,804,125 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3168,796,331 - 168,804,116 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3173,175,741 - 173,183,550 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03182,134,832 - 182,142,641 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03178,797,259 - 178,805,065 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03177,187,686 - 177,195,898 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3177,188,044 - 177,195,894 (+)Ensemblrn6Rnor6.0
Rnor_5.03180,896,548 - 180,904,402 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43170,831,286 - 170,839,091 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3163,783,634 - 163,791,446 (-)NCBICelera
RGSC_v3.13170,737,321 - 170,745,127 (+)NCBI
Cytogenetic Map3q43NCBI
TCEA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382064,055,596 - 64,072,347 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2064,049,836 - 64,072,352 (+)Ensemblhg38GRCh38
GRCh372062,688,325 - 62,703,700 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362062,158,883 - 62,174,143 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342062,158,882 - 62,174,144NCBI
Celera2059,374,545 - 59,389,785 (+)NCBICelera
Cytogenetic Map20q13.33NCBI
HuRef2059,422,225 - 59,437,466 (+)NCBIHuRef
CHM1_12062,589,462 - 62,604,716 (+)NCBICHM1_1
T2T-CHM13v2.02065,875,622 - 65,892,426 (+)NCBIT2T-CHM13v2.0
Tcea2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392181,322,090 - 181,329,860 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2181,322,103 - 181,329,864 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382181,680,297 - 181,688,067 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2181,680,310 - 181,688,071 (+)Ensemblmm10GRCm38
MGSCv372181,415,015 - 181,422,756 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362181,609,716 - 181,617,457 (+)NCBIMGSCv36mm8
Celera2185,762,702 - 185,770,433 (+)NCBICelera
Cytogenetic Map2H4NCBI
cM Map2103.72NCBI
Tcea2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955528186,642 - 194,058 (-)Ensembl
ChiLan1.0NW_004955528186,642 - 194,058 (-)NCBIChiLan1.0ChiLan1.0
TCEA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22169,880,980 - 69,890,213 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12069,873,001 - 69,882,229 (+)NCBINHGRI_mPanPan1
PanPan1.12061,977,338 - 61,986,592 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2061,976,869 - 61,986,592 (+)EnsemblpanPan2panpan1.1
TCEA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12447,508,161 - 47,512,399 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2447,508,136 - 47,537,250 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2446,639,396 - 46,646,271 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02448,644,476 - 48,651,329 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.12447,489,097 - 47,495,956 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02447,613,543 - 47,620,400 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02448,352,514 - 48,359,386 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tcea2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640195,789,352 - 195,796,792 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651411,242,739 - 11,250,260 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493651411,243,021 - 11,251,216 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TCEA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,866,377 - 62,888,787 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11762,866,594 - 62,888,790 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TCEA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12174,158 - 184,237 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2174,134 - 182,943 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605047,607,379 - 47,629,161 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tcea2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474129,692,006 - 29,699,383 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474129,691,983 - 29,699,383 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tcea2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15158,779,071 - 158,786,946 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:112
Interacting mature miRNAs:116
Transcripts:ENSRNOT00000022073
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1300161Rf10Renal function QTL 103.57renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)3181611379189428310Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3166376089189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3166376089189428310Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 91 59 6 355 191 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000022073   ⟹   ENSRNOP00000022073
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3189,173,824 - 189,182,530 (+)Ensembl
mRatBN7.2 Ensembl3168,796,331 - 168,804,116 (+)Ensembl
Rnor_6.0 Ensembl3177,188,044 - 177,195,894 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000130150   ⟹   ENSRNOP00000112743
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3189,165,603 - 189,182,540 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000166778   ⟹   ENSRNOP00000106653
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3189,173,355 - 189,182,540 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000173659   ⟹   ENSRNOP00000110687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3189,174,443 - 189,182,530 (+)Ensembl
RefSeq Acc Id: NM_057098   ⟹   NP_476439
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83189,173,826 - 189,181,632 (+)NCBI
mRatBN7.23168,796,317 - 168,804,123 (+)NCBI
Rnor_6.03177,188,063 - 177,195,870 (+)NCBI
Rnor_5.03180,896,548 - 180,904,402 (+)NCBI
RGSC_v3.43170,831,286 - 170,839,091 (+)RGD
Celera3163,783,634 - 163,791,446 (-)RGD
Sequence:
RefSeq Acc Id: XM_006235740   ⟹   XP_006235802
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83189,173,767 - 189,181,633 (+)NCBI
mRatBN7.23168,796,256 - 168,804,125 (+)NCBI
Rnor_6.03177,188,013 - 177,195,898 (+)NCBI
Rnor_5.03180,896,548 - 180,904,402 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006235741   ⟹   XP_006235803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83189,173,773 - 189,181,633 (+)NCBI
mRatBN7.23168,796,275 - 168,804,125 (+)NCBI
Rnor_6.03177,188,014 - 177,195,898 (+)NCBI
Rnor_5.03180,896,548 - 180,904,402 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006235742   ⟹   XP_006235804
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83189,173,756 - 189,181,633 (+)NCBI
mRatBN7.23168,796,244 - 168,804,125 (+)NCBI
Rnor_6.03177,188,014 - 177,195,898 (+)NCBI
Rnor_5.03180,896,548 - 180,904,402 (+)NCBI
Sequence:
RefSeq Acc Id: NP_476439   ⟸   NM_057098
- UniProtKB: Q63799 (UniProtKB/Swiss-Prot),   A0A8L2QBN2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006235804   ⟸   XM_006235742
- Peptide Label: isoform X3
- UniProtKB: A0A8L2QBN2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006235802   ⟸   XM_006235740
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QBN2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006235803   ⟸   XM_006235741
- Peptide Label: isoform X2
- UniProtKB: A0A8L2QBN2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000022073   ⟸   ENSRNOT00000022073
Ensembl Acc Id: ENSRNOP00000112743   ⟸   ENSRNOT00000130150
Ensembl Acc Id: ENSRNOP00000106653   ⟸   ENSRNOT00000166778
Ensembl Acc Id: ENSRNOP00000110687   ⟸   ENSRNOT00000173659
Protein Domains
TFIIS central   TFIIS N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q63799-F1-model_v2 AlphaFold Q63799 1-299 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692764
Promoter ID:EPDNEW_R3287
Type:initiation region
Name:Tcea2_1
Description:transcription elongation factor A2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03177,188,033 - 177,188,093EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:61825 AgrOrtholog
BioCyc Gene G2FUF-46263 BioCyc
Ensembl Genes ENSRNOG00000016288 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000022073 ENTREZGENE
  ENSRNOT00000130150 ENTREZGENE
Gene3D-CATH 1.10.472.30 UniProtKB/Swiss-Prot
  1.20.930.10 UniProtKB/Swiss-Prot
  2.20.25.10 UniProtKB/Swiss-Prot
InterPro TF_IIS-typ UniProtKB/Swiss-Prot
  TFIIS/CRSP70_N_sub UniProtKB/Swiss-Prot
  TFIIS/LEDGF_dom_sf UniProtKB/Swiss-Prot
  TFIIS_cen_dom UniProtKB/Swiss-Prot
  TFIIS_cen_dom_sf UniProtKB/Swiss-Prot
  TFIIS_N UniProtKB/Swiss-Prot
  TFSII UniProtKB/Swiss-Prot
  Znf_TFIIS UniProtKB/Swiss-Prot
KEGG Report rno:29575 UniProtKB/Swiss-Prot
NCBI Gene 29575 ENTREZGENE
PANTHER TRANSCRIPTION ELONGATION FACTOR A PROTEIN 2 UniProtKB/Swiss-Prot
  TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot
Pfam Med26 UniProtKB/Swiss-Prot
  TFIIS_C UniProtKB/Swiss-Prot
  TFIIS_M UniProtKB/Swiss-Prot
PhenoGen Tcea2 PhenoGen
PIRSF TF_IIS UniProtKB/Swiss-Prot
PROSITE TFIIS_CENTRAL UniProtKB/Swiss-Prot
  TFIIS_N UniProtKB/Swiss-Prot
  ZF_TFIIS_1 UniProtKB/Swiss-Prot
  ZF_TFIIS_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000016288 RatGTEx
SMART TFS2M UniProtKB/Swiss-Prot
  TFS2N UniProtKB/Swiss-Prot
  ZnF_C2C2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF46942 UniProtKB/Swiss-Prot
  SSF47676 UniProtKB/Swiss-Prot
  Zinc beta-ribbon UniProtKB/Swiss-Prot
UniProt A0A8L2QBN2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L8N1_RAT UniProtKB/TrEMBL
  A0ABK0M1E4_RAT UniProtKB/TrEMBL
  A0ABK0M5I6_RAT UniProtKB/TrEMBL
  A6KLY3_RAT UniProtKB/TrEMBL
  Q63799 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-19 Tcea2  transcription elongation factor A2  Tcea2  transcription elongation factor A (SII), 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Tcea2  transcription elongation factor A (SII), 2    transcription elongation factor A2  Name updated 1299863 APPROVED
2002-06-10 Tcea2  transcription elongation factor A2      Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression mRNA expressed specifically in testis 619610
gene_protein predicted protein contains 299 aa residues 619610