Symbol:
Pfkfb1
Name:
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
RGD ID:
3307
Description:
Enables several functions, including 6-phosphofructo-2-kinase activity; anion binding activity; and fructose-2,6-bisphosphate 2-phosphatase activity. Involved in several processes, including carbohydrate phosphorylation; positive regulation of phosphate metabolic process; and response to glucagon. Part of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex. Biomarker of hyperinsulinism. Orthologous to human PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; INTERACTS WITH 17beta-estradiol; 2,3,4,7,8-Pentachlorodibenzofuran; 2,3,7,8-tetrachlorodibenzodioxine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
6-PF2-K/Fru-2,6-P2ase; 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase; 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1; 6-Phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 (liver and muscle); 6-phosphofructo-2-kinase/fructose-26-bisphosphatase 1; 6-Phosphofructo-2-kinase/fructose-26-bisphosphatase 1 (liver and muscle); 6PF-2-K/Fru-2,6-P2ase 1; 6PF-2-K/Fru-2,6-P2ASE liver isozyme; PFK/FBPase 1; PFK2/FBPase2; Pfkfb01; PFRX
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Pfkfb1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Pfkfb1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Pfkfb1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Pfkfb1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
PFKFB4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4)
HGNC
OrthoDB
Homo sapiens (human):
MARCKS (myristoylated alanine rich protein kinase C substrate)
HGNC
OMA
Alliance orthologs 3
Mus musculus (house mouse):
Pfkfb1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Alliance
DIOPT (HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
pfkfb1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
si:dkey-96f10.1
Alliance
DIOPT (Ensembl Compara|Hieranoid|OMA|OrthoFinder|PANTHER|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):
FBP26
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Drosophila melanogaster (fruit fly):
Pfrx
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
pfkb-1.1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
pfkb-1.2
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
pfkfb1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 22,936,038 - 22,989,691 (+) NCBI GRCr8 mRatBN7.2 X 19,508,522 - 19,562,165 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 19,508,546 - 19,562,182 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx X 16,945,153 - 16,997,192 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 23,126,385 - 23,178,425 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 20,023,399 - 20,075,389 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 23,092,143 - 23,145,923 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 23,092,159 - 23,144,324 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 39,838,471 - 39,886,071 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 X 39,891,912 - 39,939,574 (+) NCBI Celera X 19,781,360 - 19,833,302 (+) NCBI Celera Cytogenetic Map X q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Pfkfb1 Rat (1->4)-beta-D-glucan multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of PFKFB1 mRNA CTD PMID:36331819 Pfkfb1 Rat 1,2-dimethylhydrazine decreases expression ISO Pfkfb1 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of PFKFB1 mRNA CTD PMID:22206623 Pfkfb1 Rat 17beta-estradiol decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Estradiol results in decreased expression of PFKFB1 mRNA CTD PMID:20106945 Pfkfb1 Rat 17beta-estradiol decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Estradiol results in decreased expression of PFKFB1 mRNA CTD PMID:39298647 Pfkfb1 Rat 17beta-estradiol decreases expression EXP 6480464 Estradiol results in decreased expression of PFKFB1 mRNA CTD PMID:32145629 Pfkfb1 Rat 2,2',4,4',5,5'-hexachlorobiphenyl multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [2 more ... CTD PMID:25510870 Pfkfb1 Rat 2,2',5,5'-tetrachlorobiphenyl multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [2 more ... CTD PMID:25510870 Pfkfb1 Rat 2,3,4,7,8-Pentachlorodibenzofuran decreases expression EXP 6480464 2 more ... CTD PMID:21724226 Pfkfb1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of PFKFB1 mRNA CTD PMID:19770486 Pfkfb1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in decreased expression of PFKFB1 mRNA CTD PMID:19692669 more ... Pfkfb1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of PFKFB1 mRNA CTD PMID:21215274 more ... Pfkfb1 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of PFKFB1 mRNA CTD PMID:22298810 Pfkfb1 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO PFKFB1 (Homo sapiens) 6480464 Tetrachlorodibenzodioxin affects the expression of PFKFB1 mRNA CTD PMID:22298810 Pfkfb1 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to PFKFB1 promoter] CTD PMID:19654925 Pfkfb1 Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2 more ... CTD PMID:21724226 Pfkfb1 Rat 2,4-dinitrotoluene affects expression EXP 6480464 2 and 4-dinitrotoluene affects the expression of PFKFB1 mRNA CTD PMID:21346803 Pfkfb1 Rat 2,6-dinitrotoluene affects expression EXP 6480464 2 and 6-dinitrotoluene affects the expression of PFKFB1 mRNA CTD PMID:21346803 Pfkfb1 Rat 3-chloropropane-1,2-diol increases expression EXP 6480464 alpha-Chlorohydrin results in increased expression of PFKFB1 mRNA CTD PMID:28522335 Pfkfb1 Rat 3H-1,2-dithiole-3-thione decreases expression EXP 6480464 1 and 2-dithiol-3-thione results in decreased expression of PFKFB1 mRNA CTD PMID:19162173 Pfkfb1 Rat 4,4'-sulfonyldiphenol decreases expression ISO Pfkfb1 (Mus musculus) 6480464 bisphenol S results in decreased expression of PFKFB1 mRNA CTD PMID:33297965 and PMID:39298647 Pfkfb1 Rat 4-hydroxyphenyl retinamide decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Fenretinide results in decreased expression of PFKFB1 mRNA CTD PMID:28973697 Pfkfb1 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of PFKFB1 mRNA CTD PMID:24780913 Pfkfb1 Rat acrylamide decreases expression EXP 6480464 Acrylamide results in decreased expression of PFKFB1 mRNA CTD PMID:28959563 Pfkfb1 Rat aflatoxin B1 affects expression ISO PFKFB1 (Homo sapiens) 6480464 Aflatoxin B1 affects the expression of PFKFB1 protein CTD PMID:20106945 Pfkfb1 Rat aflatoxin B1 decreases methylation ISO PFKFB1 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased methylation of PFKFB1 gene CTD PMID:27153756 Pfkfb1 Rat aflatoxin B1 decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of PFKFB1 mRNA CTD PMID:22100608 more ... Pfkfb1 Rat aflatoxin B1 decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Aflatoxin B1 results in decreased expression of PFKFB1 mRNA CTD PMID:19770486 Pfkfb1 Rat amiodarone increases expression ISO Pfkfb1 (Mus musculus) 6480464 Amiodarone results in increased expression of PFKFB1 mRNA CTD PMID:24535564 Pfkfb1 Rat ammonium chloride affects expression EXP 6480464 Ammonium Chloride affects the expression of PFKFB1 mRNA CTD PMID:16483693 Pfkfb1 Rat benzene affects expression EXP 6480464 Benzene affects the expression of PFKFB1 mRNA CTD PMID:15878777 Pfkfb1 Rat benzo[a]pyrene decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of PFKFB1 mRNA CTD PMID:20106945 more ... Pfkfb1 Rat benzo[a]pyrene affects methylation ISO PFKFB1 (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of PFKFB1 exon CTD PMID:27901495 Pfkfb1 Rat benzo[a]pyrene multiple interactions EXP 6480464 [Benzo(a)pyrene co-treated with 1 more ... CTD PMID:18711122 Pfkfb1 Rat benzo[a]pyrene decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of PFKFB1 mRNA CTD PMID:19770486 Pfkfb1 Rat benzo[b]fluoranthene multiple interactions EXP 6480464 [Benzo(a)pyrene co-treated with benzo(b)fluoranthene] affects the expression of PFKFB1 mRNA CTD PMID:18711122 Pfkfb1 Rat beta-D-fructofuranose 2,6-bisphosphate decreases abundance ISO Pfkfb1 (Mus musculus) 6480464 PFKFB1 gene mutant form results in decreased abundance of fructose 2 and 6-diphosphate CTD PMID:31974165 Pfkfb1 Rat beta-hexachlorocyclohexane decreases expression ISO Pfkfb1 (Mus musculus) 6480464 beta-hexachlorocyclohexane results in decreased expression of PFKFB1 mRNA CTD PMID:25270620 Pfkfb1 Rat bisphenol A affects expression EXP 6480464 bisphenol A affects the expression of PFKFB1 mRNA CTD PMID:25181051 Pfkfb1 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of PFKFB1 mRNA CTD PMID:30816183 more ... Pfkfb1 Rat bisphenol A decreases methylation ISO Pfkfb1 (Mus musculus) 6480464 bisphenol A results in decreased methylation of PFKFB1 promoter CTD PMID:27312807 Pfkfb1 Rat bromobenzene increases expression EXP 6480464 bromobenzene results in increased expression of PFKFB1 mRNA CTD PMID:32479839 Pfkfb1 Rat cantharidin decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Cantharidin results in decreased expression of PFKFB1 mRNA CTD PMID:36907384 Pfkfb1 Rat CGP 52608 multiple interactions ISO PFKFB1 (Homo sapiens) 6480464 CGP 52608 promotes the reaction [RORA protein binds to PFKFB1 gene] CTD PMID:28238834 Pfkfb1 Rat chloroprene increases expression EXP 6480464 Chloroprene results in increased expression of PFKFB1 mRNA CTD PMID:23125180 Pfkfb1 Rat clofibric acid affects expression EXP 6480464 Clofibric Acid affects the expression of PFKFB1 mRNA CTD PMID:17602206 Pfkfb1 Rat cyclosporin A decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Cyclosporine results in decreased expression of PFKFB1 mRNA CTD PMID:23830897 Pfkfb1 Rat cyclosporin A increases expression ISO PFKFB1 (Homo sapiens) 6480464 Cyclosporine results in increased expression of PFKFB1 mRNA CTD PMID:27989131 Pfkfb1 Rat cyclosporin A decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Cyclosporine results in decreased expression of PFKFB1 mRNA CTD PMID:20106945 and PMID:23830897 Pfkfb1 Rat D-glucopyranose 6-phosphate multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 PFKFB1 gene mutant form inhibits the reaction [Metformin results in decreased abundance of Glucose-6-Phosphate metabolite] CTD PMID:31974165 Pfkfb1 Rat D-glucopyranose 6-phosphate increases abundance ISO Pfkfb1 (Mus musculus) 6480464 PFKFB1 gene mutant form results in increased abundance of Glucose-6-Phosphate CTD PMID:31974165 Pfkfb1 Rat dibenz[a,h]anthracene multiple interactions EXP 6480464 [Benzo(a)pyrene co-treated with 1 more ... CTD PMID:18711122 Pfkfb1 Rat dorsomorphin multiple interactions ISO PFKFB1 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PFKFB1 mRNA CTD PMID:27188386 Pfkfb1 Rat doxorubicin decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Doxorubicin results in decreased expression of PFKFB1 mRNA CTD PMID:31768571 and PMID:36227756 Pfkfb1 Rat endosulfan decreases expression EXP 6480464 Endosulfan results in decreased expression of PFKFB1 mRNA CTD PMID:29391264 Pfkfb1 Rat epoxiconazole decreases expression ISO Pfkfb1 (Mus musculus) 6480464 epoxiconazole results in decreased expression of PFKFB1 mRNA CTD PMID:35436446 Pfkfb1 Rat ethanol multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [Carbon Tetrachloride co-treated with Ethanol] results in decreased expression of PFKFB1 mRNA CTD PMID:30517762 Pfkfb1 Rat flavonoids decreases expression EXP 6480464 Flavonoids results in decreased expression of PFKFB1 mRNA CTD PMID:18035473 Pfkfb1 Rat fluoranthene multiple interactions EXP 6480464 [Benzo(a)pyrene co-treated with fluoranthene] affects the expression of PFKFB1 mRNA CTD PMID:18711122 Pfkfb1 Rat flutamide decreases expression EXP 6480464 Flutamide results in decreased expression of PFKFB1 mRNA CTD PMID:24136188 Pfkfb1 Rat flutamide increases expression EXP 6480464 Flutamide results in increased expression of PFKFB1 mRNA CTD PMID:21525395 and PMID:24793618 Pfkfb1 Rat furan increases expression EXP 6480464 furan results in increased expression of PFKFB1 mRNA CTD PMID:26194646 Pfkfb1 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of PFKFB1 mRNA CTD PMID:33387578 Pfkfb1 Rat glyceraldehyde 3-phosphate decreases chemical synthesis ISO Pfkfb1 (Mus musculus) 6480464 PFKFB1 gene mutant form results in decreased chemical synthesis of Glyceraldehyde 3-Phosphate metabolite CTD PMID:31974165 Pfkfb1 Rat glyceraldehyde 3-phosphate multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 PFKFB1 gene mutant form inhibits the reaction [Metformin results in increased abundance of Glyceraldehyde 3-Phosphate metabolite] CTD PMID:31974165 Pfkfb1 Rat Heptachlor epoxide decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Heptachlor Epoxide results in decreased expression of PFKFB1 mRNA CTD PMID:25270620 Pfkfb1 Rat indole-3-methanol affects expression EXP 6480464 indole-3-carbinol affects the expression of PFKFB1 mRNA CTD PMID:21396975 Pfkfb1 Rat L-ascorbic acid multiple interactions EXP 6480464 Ascorbic Acid inhibits the reaction [Iodoacetamide affects the activity of PFKFB1 protein] CTD PMID:6092364 Pfkfb1 Rat Lasiocarpine decreases expression ISO PFKFB1 (Homo sapiens) 6480464 lasiocarpine results in decreased expression of PFKFB1 mRNA CTD PMID:32234424 and PMID:35690182 Pfkfb1 Rat metacetamol decreases expression ISO Pfkfb1 (Mus musculus) 6480464 3-hydroxyacetanilide results in decreased expression of PFKFB1 mRNA CTD PMID:18544908 Pfkfb1 Rat metformin increases expression EXP 6480464 Metformin results in increased expression of PFKFB1 mRNA CTD PMID:31324951 Pfkfb1 Rat metformin multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 PFKFB1 gene mutant form inhibits the reaction [Metformin results in decreased abundance of Glucose-6-Phosphate metabolite] and PFKFB1 gene mutant form inhibits the reaction [Metformin results in increased abundance of Glyceraldehyde 3-Phosphate metabolite] CTD PMID:31974165 Pfkfb1 Rat methapyrilene decreases expression EXP 6480464 Methapyrilene results in decreased expression of PFKFB1 mRNA CTD PMID:30467583 Pfkfb1 Rat N-nitrosodiethylamine multiple interactions EXP 6480464 [Diethylnitrosamine co-treated with Thioacetamide] results in decreased expression of PFKFB1 mRNA CTD PMID:28943392 Pfkfb1 Rat N-Nitrosopyrrolidine decreases expression ISO PFKFB1 (Homo sapiens) 6480464 N-Nitrosopyrrolidine results in decreased expression of PFKFB1 mRNA CTD PMID:32234424 and PMID:35690182 Pfkfb1 Rat nitrofen increases expression EXP 6480464 nitrofen results in increased expression of PFKFB1 mRNA CTD PMID:33484710 Pfkfb1 Rat O-methyleugenol decreases expression ISO PFKFB1 (Homo sapiens) 6480464 methyleugenol results in decreased expression of PFKFB1 mRNA CTD PMID:32234424 and PMID:35690182 Pfkfb1 Rat obeticholic acid increases expression ISO PFKFB1 (Homo sapiens) 6480464 obeticholic acid results in increased expression of PFKFB1 mRNA CTD PMID:27939613 Pfkfb1 Rat oxycodone increases expression EXP 6480464 Oxycodone results in increased expression of PFKFB1 mRNA CTD PMID:23439660 Pfkfb1 Rat ozone increases expression EXP 6480464 Ozone results in increased expression of PFKFB1 mRNA CTD PMID:25838073 Pfkfb1 Rat paracetamol affects expression ISO Pfkfb1 (Mus musculus) 6480464 Acetaminophen affects the expression of PFKFB1 mRNA CTD PMID:17562736 Pfkfb1 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of PFKFB1 mRNA CTD PMID:33387578 Pfkfb1 Rat paracetamol decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Acetaminophen results in decreased expression of PFKFB1 mRNA CTD PMID:21420995 and PMID:29067470 Pfkfb1 Rat paracetamol decreases expression ISO Pfkfb1 (Mus musculus) 6480464 Acetaminophen results in decreased expression of PFKFB1 mRNA CTD PMID:18544908 Pfkfb1 Rat paraquat decreases expression EXP 6480464 Paraquat results in decreased expression of PFKFB1 mRNA CTD PMID:32680482 Pfkfb1 Rat PCB138 multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [2 more ... CTD PMID:25510870 Pfkfb1 Rat perfluorooctane-1-sulfonic acid affects expression ISO Pfkfb1 (Mus musculus) 6480464 perfluorooctane sulfonic acid affects the expression of PFKFB1 mRNA CTD PMID:19429403 Pfkfb1 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of PFKFB1 mRNA CTD PMID:36331819 Pfkfb1 Rat perfluorooctanoic acid affects expression ISO Pfkfb1 (Mus musculus) 6480464 perfluorooctanoic acid affects the expression of PFKFB1 mRNA CTD PMID:19429403 Pfkfb1 Rat permethrin increases expression ISO PFKFB1 (Homo sapiens) 6480464 Permethrin results in increased expression of PFKFB1 mRNA CTD PMID:37047231 Pfkfb1 Rat phenformin decreases expression EXP 6480464 Phenformin results in decreased expression of PFKFB1 mRNA CTD PMID:31324951 Pfkfb1 Rat phenobarbital increases expression EXP 6480464 Phenobarbital results in increased expression of PFKFB1 mRNA CTD PMID:19162173 Pfkfb1 Rat pirinixic acid increases expression ISO Pfkfb1 (Mus musculus) 6480464 pirinixic acid results in increased expression of PFKFB1 mRNA CTD PMID:18301758 Pfkfb1 Rat pirinixic acid increases expression EXP 6480464 pirinixic acid results in increased expression of PFKFB1 mRNA CTD PMID:19162173 Pfkfb1 Rat pirinixic acid multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of PFKFB1 mRNA CTD PMID:19710929 Pfkfb1 Rat resveratrol increases expression EXP 6480464 resveratrol results in increased expression of PFKFB1 mRNA CTD PMID:25905778 Pfkfb1 Rat rotenone decreases expression EXP 6480464 Rotenone results in decreased expression of PFKFB1 mRNA CTD PMID:28374803 Pfkfb1 Rat SB 431542 multiple interactions ISO PFKFB1 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PFKFB1 mRNA CTD PMID:27188386 Pfkfb1 Rat sodium arsenite decreases expression ISO PFKFB1 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of PFKFB1 mRNA CTD PMID:29301061 Pfkfb1 Rat streptozocin increases expression EXP 6480464 Streptozocin results in increased expression of PFKFB1 mRNA CTD PMID:25905778 Pfkfb1 Rat sulforaphane increases expression ISO Pfkfb1 (Mus musculus) 6480464 sulforaphane results in increased expression of PFKFB1 mRNA CTD PMID:30529165 Pfkfb1 Rat sunitinib decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Sunitinib results in decreased expression of PFKFB1 mRNA CTD PMID:31533062 Pfkfb1 Rat tetrachloromethane multiple interactions ISO Pfkfb1 (Mus musculus) 6480464 [Carbon Tetrachloride co-treated with Ethanol] results in decreased expression of PFKFB1 mRNA CTD PMID:30517762 Pfkfb1 Rat thiabendazole increases expression EXP 6480464 Thiabendazole results in increased expression of PFKFB1 mRNA CTD PMID:18539377 Pfkfb1 Rat thioacetamide decreases expression EXP 6480464 Thioacetamide results in decreased expression of PFKFB1 mRNA CTD PMID:23411599 and PMID:34492290 Pfkfb1 Rat thioacetamide multiple interactions EXP 6480464 [Diethylnitrosamine co-treated with Thioacetamide] results in decreased expression of PFKFB1 mRNA CTD PMID:28943392 Pfkfb1 Rat titanium dioxide decreases expression ISO Pfkfb1 (Mus musculus) 6480464 titanium dioxide results in decreased expression of PFKFB1 mRNA CTD PMID:23557971 Pfkfb1 Rat tris(2-butoxyethyl) phosphate affects expression ISO PFKFB1 (Homo sapiens) 6480464 tris(2-butoxyethyl) phosphate affects the expression of PFKFB1 mRNA CTD PMID:29024780 Pfkfb1 Rat troglitazone increases expression ISO Pfkfb1 (Mus musculus) 6480464 troglitazone results in increased expression of PFKFB1 mRNA CTD PMID:28973697 Pfkfb1 Rat urethane decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Urethane results in decreased expression of PFKFB1 mRNA CTD PMID:28818685 Pfkfb1 Rat valdecoxib decreases expression EXP 6480464 valdecoxib results in decreased expression of PFKFB1 mRNA CTD PMID:24136188 Pfkfb1 Rat valproic acid increases expression ISO Pfkfb1 (Mus musculus) 6480464 Valproic Acid results in increased expression of PFKFB1 mRNA CTD PMID:24535564 Pfkfb1 Rat valproic acid decreases expression ISO PFKFB1 (Homo sapiens) 6480464 Valproic Acid results in decreased expression of PFKFB1 mRNA CTD PMID:26272509 and PMID:29154799 Pfkfb1 Rat valproic acid multiple interactions ISO PFKFB1 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PFKFB1 mRNA CTD PMID:27188386
Imported Annotations - SMPDB
Imported Annotations - KEGG (archival)
(1->4)-beta-D-glucan (ISO) 1,2-dimethylhydrazine (ISO) 17beta-estradiol (EXP,ISO) 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) 2,2',5,5'-tetrachlorobiphenyl (ISO) 2,3,4,7,8-Pentachlorodibenzofuran (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 2,4-dinitrotoluene (EXP) 2,6-dinitrotoluene (EXP) 3-chloropropane-1,2-diol (EXP) 3H-1,2-dithiole-3-thione (EXP) 4,4'-sulfonyldiphenol (ISO) 4-hydroxyphenyl retinamide (ISO) 6-propyl-2-thiouracil (EXP) acrylamide (EXP) aflatoxin B1 (ISO) amiodarone (ISO) ammonium chloride (EXP) benzene (EXP) benzo[a]pyrene (EXP,ISO) benzo[b]fluoranthene (EXP) beta-D-fructofuranose 2,6-bisphosphate (ISO) beta-hexachlorocyclohexane (ISO) bisphenol A (EXP,ISO) bromobenzene (EXP) cantharidin (ISO) CGP 52608 (ISO) chloroprene (EXP) clofibric acid (EXP) cyclosporin A (ISO) D-glucopyranose 6-phosphate (ISO) dibenz[a,h]anthracene (EXP) dorsomorphin (ISO) doxorubicin (ISO) endosulfan (EXP) epoxiconazole (ISO) ethanol (ISO) flavonoids (EXP) fluoranthene (EXP) flutamide (EXP) furan (EXP) gentamycin (EXP) glyceraldehyde 3-phosphate (ISO) Heptachlor epoxide (ISO) indole-3-methanol (EXP) L-ascorbic acid (EXP) Lasiocarpine (ISO) metacetamol (ISO) metformin (EXP,ISO) methapyrilene (EXP) N-nitrosodiethylamine (EXP) N-Nitrosopyrrolidine (ISO) nitrofen (EXP) O-methyleugenol (ISO) obeticholic acid (ISO) oxycodone (EXP) ozone (EXP) paracetamol (EXP,ISO) paraquat (EXP) PCB138 (ISO) perfluorooctane-1-sulfonic acid (ISO) perfluorooctanoic acid (ISO) permethrin (ISO) phenformin (EXP) phenobarbital (EXP) pirinixic acid (EXP,ISO) resveratrol (EXP) rotenone (EXP) SB 431542 (ISO) sodium arsenite (ISO) streptozocin (EXP) sulforaphane (ISO) sunitinib (ISO) tetrachloromethane (ISO) thiabendazole (EXP) thioacetamide (EXP) titanium dioxide (ISO) tris(2-butoxyethyl) phosphate (ISO) troglitazone (ISO) urethane (ISO) valdecoxib (EXP) valproic acid (ISO)
Molecular Function
6-phosphofructo-2-kinase activity (IBA,IDA,IEA) ATP binding (IDA,IEA) catalytic activity (IEA) fructose-2,6-bisphosphate 2-phosphatase activity (IBA,IDA,IEA,ISO,ISS) fructose-6-phosphate binding (IDA) hydrolase activity (IEA) identical protein binding (IDA,IPI,ISO) kinase activity (IEA) kinase binding (IPI) nucleotide binding (IEA) protein binding (ISO) transferase activity (IEA)
1.
Characterization of glucokinase-binding protein epitopes by a phage-displayed peptide library. Identification of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase as a novel interaction partner.
Baltrusch S, etal., J Biol Chem. 2001 Nov 23;276(47):43915-23. Epub 2001 Aug 24.
2.
Differential regulation of the expression of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase and pyruvate kinase by cyclic adenosine 3',5'-monophosphate in fetal and adult hepatocytes.
Casado M, etal., J Cell Physiol. 1995 Dec;165(3):630-8.
3.
Elucidation of the role of fructose 2,6-bisphosphate in the regulation of glucose fluxes in mice using in vivo (13)C NMR measurements of hepatic carbohydrate metabolism.
Choi IY, etal., Eur J Biochem. 2002 Sep;269(18):4418-26.
4.
Isolation of a cDNA clone for rat liver 6-phosphofructo 2-kinase/fructose 2,6-bisphosphatase.
Colosia AD, etal., Biochem Biophys Res Commun 1987 Mar 30;143(3):1092-8.
5.
Molecular forms of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase expressed in rat skeletal muscle.
Crepin KM, etal., J Biol Chem 1992 Oct 25;267(30):21698-704.
6.
Rat muscle 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase. Study of the kinase domain by site-directed mutagenesis.
Crepin KM, etal., J Biol Chem 1993 Jul 15;268(20):15277-84.
7.
Complete nucleotide sequence coding for rat liver 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase derived from a cDNA clone.
Darville MI, etal., FEBS Lett 1987 Nov 30;224(2):317-21.
8.
Characterization of an enhancer upstream from the muscle-type promoter of a gene encoding 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase.
Darville MI, etal., Nucleic Acids Res 1992 Jul 25;20(14):3575-83.
9.
5' flanking sequence and structure of a gene encoding rat 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase.
Darville MI, etal., Proc Natl Acad Sci U S A 1989 Sep;86(17):6543-7.
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
11.
Rat ISS GO annotations from GOA human gene data--August 2006
GOA data from the GO Consortium
12.
KEGG: Kyoto Encyclopedia of Genes and Genomes
KEGG
13.
Dimer interface rearrangement of the 6-phosphofructo-2-kinase/fructose 2,6-bisphosphatase rat liver isoenzyme by cAMP-dependent Ser-32 phosphorylation.
Langer S, etal., FEBS Lett. 2012 May 21;586(10):1419-25. doi: 10.1016/j.febslet.2012.03.066.
14.
Crystal structure of the rat liver fructose-2,6-bisphosphatase based on selenomethionine multiwavelength anomalous dispersion phases.
Lee YH, etal., Biochemistry. 1996 May 14;35(19):6010-9.
15.
Insulin inhibits glucocorticoid-induced stimulation of liver 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase gene transcription.
Lemaigre FP, etal., FEBS Lett. 1994 Mar 7;340(3):221-5.
16.
Interaction of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFK-2/FBPase-2) with glucokinase activates glucose phosphorylation and glucose metabolism in insulin-producing cells.
Massa L, etal., Diabetes. 2004 Apr;53(4):1020-9.
17.
Electronic Transfer of LocusLink and RefSeq Data
NCBI rat LocusLink and RefSeq merged data July 26, 2002
18.
Effect of starvation on gene expression of regulatory enzymes of glycolysis/gluconeogenesis in genetically obese (fa/fa) Zucker rats.
Perez JX, etal., Int J Obes Relat Metab Disord. 1998 Jul;22(7):667-72.
19.
KEGG Annotation Import Pipeline
Pipeline to import KEGG annotations from KEGG into RGD
20.
SMPDB Annotation Import Pipeline
Pipeline to import SMPDB annotations from SMPDB into RGD
21.
ClinVar Automated Import and Annotation Pipeline
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
22.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
23.
Study of the roles of Arg-104 and Arg-225 in the 2-kinase domain of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase by site-directed mutagenesis.
Rider MH, etal., Biochem J. 1995 Jul 1;309 ( Pt 1):341-6.
24.
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase: head-to-head with a bifunctional enzyme that controls glycolysis.
Rider MH, etal., Biochem J. 2004 Aug 1;381(Pt 3):561-79.
25.
Transcriptional and posttranscriptional regulation of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase during liver regeneration.
Rosa JL, etal., Proc Natl Acad Sci U S A. 1992 May 1;89(9):3746-50.
26.
Gene-based anchoring of the rat genetic linkage and cytogenetic maps: new regional localizations, orientation of the linkage groups, and insights into mammalian chromosome evolution.
Szpirer C, etal., Mamm Genome 1998 Sep;9(9):721-34
Pfkfb1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 X 22,936,038 - 22,989,691 (+) NCBI GRCr8 mRatBN7.2 X 19,508,522 - 19,562,165 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 19,508,546 - 19,562,182 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx X 16,945,153 - 16,997,192 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 23,126,385 - 23,178,425 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 20,023,399 - 20,075,389 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 23,092,143 - 23,145,923 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 23,092,159 - 23,144,324 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 39,838,471 - 39,886,071 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 X 39,891,912 - 39,939,574 (+) NCBI Celera X 19,781,360 - 19,833,302 (+) NCBI Celera Cytogenetic Map X q12 NCBI
PFKFB1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 X 54,932,961 - 54,998,789 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl X 54,932,961 - 54,998,534 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 X 54,959,394 - 55,025,222 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 X 54,976,315 - 55,037,236 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 X 54,842,610 - 54,903,532 NCBI Celera X 58,794,738 - 58,855,654 (-) NCBI Celera Cytogenetic Map X p11.21 NCBI HuRef X 52,011,285 - 52,075,912 (-) NCBI HuRef CHM1_1 X 54,949,616 - 55,015,006 (-) NCBI CHM1_1 T2T-CHM13v2.0 X 54,226,089 - 54,293,383 (-) NCBI T2T-CHM13v2.0
Pfkfb1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 X 149,370,441 - 149,426,874 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl X 149,371,225 - 149,426,874 (+) Ensembl GRCm39 Ensembl GRCm38 X 150,587,445 - 150,643,878 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl X 150,588,229 - 150,643,878 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 X 147,024,464 - 147,078,403 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 X 145,930,637 - 145,984,576 (+) NCBI MGSCv36 mm8 Celera X 133,769,155 - 133,816,855 (-) NCBI Celera Cytogenetic Map X F3 NCBI cM Map X 68.46 NCBI
Pfkfb1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955475 2,279,390 - 2,342,750 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955475 2,279,390 - 2,343,881 (-) NCBI ChiLan1.0 ChiLan1.0
PFKFB1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 X 56,327,712 - 56,394,891 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 X 56,331,319 - 56,398,498 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 X 47,143,081 - 47,209,034 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 X 55,374,807 - 55,436,887 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl X 55,374,807 - 55,441,024 (-) Ensembl panpan1.1 panPan2
PFKFB1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 X 46,617,522 - 46,691,375 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl X 46,613,847 - 46,691,038 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha X 37,952,977 - 38,026,831 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 X 46,906,002 - 46,979,845 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl X 46,906,011 - 46,980,075 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 X 46,415,757 - 46,489,624 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 X 46,882,333 - 46,956,196 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 X 46,824,607 - 46,898,459 (-) NCBI UU_Cfam_GSD_1.0
Pfkfb1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 X 39,409,064 - 39,466,600 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936751 1,753,627 - 1,806,294 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936751 1,753,627 - 1,806,315 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
PFKFB1 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl X 47,765,154 - 47,859,061 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 X 47,771,751 - 47,859,079 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 X 53,701,871 - 53,795,220 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PFKFB1 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 X 51,015,810 - 51,077,444 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl X 51,016,318 - 51,071,977 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666086 4,991,650 - 5,055,662 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Pfkfb1 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 254 Count of miRNA genes: 129 Interacting mature miRNAs: 155 Transcripts: ENSRNOT00000000178, ENSRNOT00000033656 Prediction methods: Microtar, Miranda, Pita, Rnahybrid, Targetscan Result types: miRGate_prediction
70165 Bp64 Blood pressure QTL 64 5.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) X 1448129 31706553 Rat 1298071 Edpm12 Estrogen-dependent pituitary mass QTL 12 3.2 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) X 2927898 47927898 Rat 731181 Uae27 Urinary albumin excretion QTL 27 2.7 0.0059 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) X 1 43491017 Rat 61430 Cia18 Collagen induced arthritis QTL 18 3.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) X 14843113 120568734 Rat 10755455 Coatc13 Coat color QTL 13 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 4406000 49406000 Rat 631666 Iddm5 Insulin dependent diabetes mellitus QTL 5 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) X 4494549 49494549 Rat 634325 Bw13 Body weight QTL 13 0 body mass (VT:0001259) body weight (CMO:0000012) X 1447972 20991088 Rat 631204 Gluco15 Glucose level QTL 15 0.001 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) X 1623715 22646544 Rat 71116 Niddm16 Non-insulin dependent diabetes mellitus QTL 16 7.81 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) X 15297802 60297802 Rat
DXMgh5
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 X 22,938,477 - 22,938,615 (+) Marker Load Pipeline mRatBN7.2 X 19,510,953 - 19,511,091 (-) MAPPER mRatBN7.2 mRatBN7.2 X 19,510,953 - 19,511,180 (-) MAPPER mRatBN7.2 Rnor_6.0 X 23,143,400 - 23,143,537 NCBI Rnor6.0 Rnor_6.0 X 23,143,255 - 23,143,537 NCBI Rnor6.0 Rnor_5.0 X 23,563,507 - 23,563,644 UniSTS Rnor5.0 Rnor_5.0 X 23,563,362 - 23,563,644 UniSTS Rnor5.0 RGSC_v3.4 X 39,834,773 - 39,834,910 UniSTS RGSC3.4 RGSC_v3.4 X 39,834,772 - 39,834,910 RGD RGSC3.4 RGSC_v3.1 X 39,888,241 - 39,888,379 RGD Celera X 19,782,147 - 19,782,284 UniSTS RH 2.0 Map 21 174.0 RGD Cytogenetic Map X q22-q31 UniSTS
DXArb5
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 X 19,510,770 - 19,511,180 (-) MAPPER mRatBN7.2 mRatBN7.2 X 19,510,770 - 19,511,071 (-) MAPPER mRatBN7.2 Rnor_6.0 X 23,143,420 - 23,143,720 NCBI Rnor6.0 Rnor_6.0 X 23,143,275 - 23,143,720 NCBI Rnor6.0 Rnor_5.0 X 23,563,382 - 23,563,827 UniSTS Rnor5.0 Rnor_5.0 X 23,563,527 - 23,563,827 UniSTS Rnor5.0 RGSC_v3.4 X 39,834,590 - 39,834,890 UniSTS RGSC3.4 RGSC_v3.1 X 39,888,058 - 39,888,359 RGD Celera X 19,781,964 - 19,782,264 UniSTS Cytogenetic Map X q22-q31 UniSTS
DXWox4
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 X 22,938,479 - 22,938,614 (+) Marker Load Pipeline mRatBN7.2 X 19,510,955 - 19,511,090 (-) MAPPER mRatBN7.2 mRatBN7.2 X 19,510,955 - 19,511,180 (-) MAPPER mRatBN7.2 Rnor_6.0 X 23,143,401 - 23,143,535 NCBI Rnor6.0 Rnor_6.0 X 23,143,256 - 23,143,535 NCBI Rnor6.0 Rnor_5.0 X 23,563,508 - 23,563,642 UniSTS Rnor5.0 Rnor_5.0 X 23,563,363 - 23,563,642 UniSTS Rnor5.0 RGSC_v3.4 X 39,834,775 - 39,834,909 UniSTS RGSC3.4 RGSC_v3.4 X 39,834,774 - 39,834,909 RGD RGSC3.4 RGSC_v3.1 X 39,888,243 - 39,888,378 RGD Celera X 19,782,149 - 19,782,283 UniSTS RH 3.4 Map X 209.72 RGD RH 3.4 Map X 209.72 UniSTS RH 2.0 Map 21 201.6 RGD Cytogenetic Map X q22-q31 UniSTS Cytogenetic Map X q21 UniSTS
RH130115
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 X 19,561,912 - 19,562,097 (-) MAPPER mRatBN7.2 Rnor_6.0 X 23,092,210 - 23,092,394 NCBI Rnor6.0 Rnor_5.0 X 23,512,733 - 23,512,917 UniSTS Rnor5.0 RGSC_v3.4 X 39,885,836 - 39,886,020 UniSTS RGSC3.4 Celera X 19,833,067 - 19,833,251 UniSTS Cytogenetic Map X q22-q31 UniSTS
RH94813
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 X 19,561,977 - 19,562,161 (-) MAPPER mRatBN7.2 Rnor_6.0 X 23,092,146 - 23,092,329 NCBI Rnor6.0 Rnor_5.0 X 23,512,669 - 23,512,852 UniSTS Rnor5.0 RGSC_v3.4 X 39,885,901 - 39,886,084 UniSTS RGSC3.4 Celera X 19,833,132 - 19,833,315 UniSTS Cytogenetic Map X q22-q31 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000000178 ⟹ ENSRNOP00000000178
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 19,508,546 - 19,562,155 (+) Ensembl Rnor_6.0 Ensembl X 23,092,159 - 23,144,324 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000033656 ⟹ ENSRNOP00000035212
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 19,514,626 - 19,562,182 (+) Ensembl Rnor_6.0 Ensembl X 23,092,159 - 23,139,694 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000081239 ⟹ ENSRNOP00000071567
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 19,510,167 - 19,562,148 (+) Ensembl Rnor_6.0 Ensembl X 23,092,159 - 23,144,324 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000102413 ⟹ ENSRNOP00000093099
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl X 19,537,270 - 19,562,182 (+) Ensembl
RefSeq Acc Id:
NM_001271063 ⟹ NP_001257992
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,937,691 - 22,989,670 (+) NCBI mRatBN7.2 X 19,510,167 - 19,562,148 (+) NCBI Rnor_6.0 X 23,092,159 - 23,144,324 (-) NCBI Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI Celera X 19,781,360 - 19,833,302 (+) NCBI
Sequence:
GGGCGCTTCCTCAGCCTTCCCAGGAACCAACGGATGTCTCCGAGTTTTCTATTTGATGCCACCCACCGGACCTGCTTTGGGGGTCTGTAAATGCAAGAGAGCCATTGGAAAATTAGCGATGGAAGAAA AAGCCTCTAAGAGAACAGCCTCCATACCACAGTTCACTAATTCTCCCACGATGGTGATCATGGTGGGTTTACCAGCTCGAGGCAAGACCTACATCTCTACGAAGCTCACACGCTATCTCAACTGGATA GGAACACCAACTAAAGTGTTTAATTTAGGTCAGTATCGACGAGAGGCAGTGAGTTACAGGAACTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGC CCTAAAGGATGTCCATAAGTATCTCAGCCGCGAGGAAGGTCATGTTGCGGTTTTTGATGCCACCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCT TCTTTATTGAGTCTATTTGTAATGACCCCGAAATCATTGCAGAAAACATCAAGCAAGTGAAACTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATA GAGTGCTATGAGATCAACTACCAACCTTTGGATGAGGAATTGGACAGCCACCTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTAC AGCCTACTACCTCATGAACATCCATGTCACACCTCGATCTATCTACCTATGCCGCCATGGTGAGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGT ATGCCTATGCACTAGCCAACTTCATCCGGTCTCAAGGCATCAGCTCCCTGAAAGTATGGACTAGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCC CTGAATGAGATTGATGCGGGTGTCTGTGAAGAGATGACCTATGAAGAAATTCAGGAACACTACCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTA TGAGGATCTGGTTCAGCGTCTTGAACCAGTTATAATGGAGCTAGAACGGCAAGAAAATGTACTGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATG AGCTGCCCTATCTCAAGTGTCCTCTGCATACTGTGCTCAAACTCACACCTGTGGCTTATGGCTGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAAT GTGGACATCACCCGTGAAGCTGAGGAAGCCTTGGACACTGTACCTGCCCATTACTGAGCCCTTTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCT CCTTAAGCAGACTCTGGCTATGGCCTGAGAGTGCCCTACCTCCAGTGAAGAAGTCCGTAGCAGCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCT TTTAAATATTCTCTGATAAATAAAGATGTTTATTTCTGCCTAT
hide sequence
RefSeq Acc Id:
NM_001271064 ⟹ NP_001257993
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,937,691 - 22,989,670 (+) NCBI mRatBN7.2 X 19,510,167 - 19,562,148 (+) NCBI Rnor_6.0 X 23,092,159 - 23,144,324 (-) NCBI Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI Celera X 19,781,360 - 19,833,302 (+) NCBI
Sequence:
GGGCGCTTCCTCAGCCTTCCCAGGAACCAACGGATGTCTCCGAGTTTTCTATTTGATGCCACCC ACCGGACCTGCTTTGGGGGTCTGTAAATGCAAGAGAGCCATTGGAAAATTAGCGATGGAAGAAAAAGCCTCTAAGAGAACAGTGTTTAATTTAGGTCAGTATCGACGAGAGGCAGTGAGTTACAGGAA CTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAAGTATCTCAGCCGCGAGGAAGGTCATGTTGCGGTTTTTGATGCCA CCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCTTCTTTATTGAGTCTATTTGTAATGACCCCGAAATCATTGCAGAAAACATCAAGCAAGTGAAA CTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATAGAGTGCTATGAGATCAACTACCAACCTTTGGATGAGGAATTGGACAGCCACCTGTCCTACAT CAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTACAGCCTACTACCTCATGAACATCCATGTCACACCTCGATCTATCTACCTATGCCGCCATGGTG AGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGTATGCCTATGCACTAGCCAACTTCATCCGGTCTCAAGGCATCAGCTCCCTGAAAGTATGGACT AGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCCCTGAATGAGATTGATGCGGGTGTCTGTGAAGAGATGACCTATGAAGAAATTCAGGAACACTA CCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTATGAGGATCTGGTTCAGCGTCTTGAACCAGTTATAATGGAGCTAGAACGGCAAGAAAATGTAC TGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTATCTCAAGTGTCCTCTGCATACTGTGCTCAAACTCACACCTGTGGCTTATGGC TGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAATGTGGACATCACCCGTGAAGCTGAGGAAGCCTTGGACACTGTACCTGCCCATTACTGAGCCCT TTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCTCCTTAAGCAGACTCTGGCTATGGCCTGAGAGTGCCCTACCTCCAGTGAAGAAGTCCGTAGCA GCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCTTTTAAATATTCTCTGATAAATAAAGATGTTTATTTCTGCCTAT
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RefSeq Acc Id:
NM_012621 ⟹ NP_036753
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,942,176 - 22,989,670 (+) NCBI mRatBN7.2 X 19,514,653 - 19,562,148 (+) NCBI Rnor_6.0 X 23,092,159 - 23,139,694 (-) NCBI Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI RGSC_v3.4 X 39,838,471 - 39,886,071 (+) RGD Celera X 19,785,844 - 19,833,302 (+) NCBI
Sequence:
AAAAGAGGGAGCTGGAGATAATCTGTGAGAGGCTCCGAAGCCCAGTACATCCCCCTGACTCAGCCCTGCCCACCTGCTGCTGTGACTACAGCAACAGACAAGACAGCTAGGAAGATAGGAAGTGAGGT CCAATACCTTGTGGGCAGTGGTGTCATTAGCTGCAACGCCTAAGATGTCTCGAGAGATGGGAGAACTCACTCAAACCAGGTTACAGAAGATCTGGATTCCACACAGCAGCAGTAGCAGCGTGCTGCAA CGGCGAAGGGGCTCCTCCATACCACAGTTCACTAATTCTCCCACGATGGTGATCATGGTGGGTTTACCAGCTCGAGGCAAGACCTACATCTCTACGAAGCTCACACGCTATCTCAACTGGATAGGAAC ACCAACTAAAGTGTTTAATTTAGGTCAGTATCGACGAGAGGCAGTGAGTTACAGGAACTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAA AGGATGTCCATAAGTATCTCAGCCGCGAGGAAGGTCATGTTGCGGTTTTTGATGCCACCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCTTCTTT ATTGAGTCTATTTGTAATGACCCCGAAATCATTGCAGAAAACATCAAGCAAGTGAAACTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATAGAGTG CTATGAGATCAACTACCAACCTTTGGATGAGGAATTGGACAGCCACCTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTACAGCCT ACTACCTCATGAACATCCATGTCACACCTCGATCTATCTACCTATGCCGCCATGGTGAGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGTATGCC TATGCACTAGCCAACTTCATCCGGTCTCAAGGCATCAGCTCCCTGAAAGTATGGACTAGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCCCTGAA TGAGATTGATGCGGGTGTCTGTGAAGAGATGACCTATGAAGAAATTCAGGAACACTACCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTATGAGG ATCTGGTTCAGCGTCTTGAACCAGTTATAATGGAGCTAGAACGGCAAGAAAATGTACTGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATGAGCTG CCCTATCTCAAGTGTCCTCTGCATACTGTGCTCAAACTCACACCTGTGGCTTATGGCTGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAATGTGGA CATCACCCGTGAAGCTGAGGAAGCCTTGGACACTGTACCTGCCCATTACTGAGCCCTTTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCTCCTTA AGCAGACTCTGGCTATGGCCTGAGAGTGCCCTACCTCCAGTGAAGAAGTCCGTAGCAGCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCTTTTAA ATATTCTCTGATAAATAAAGATGTTTATTTCTGCCTAT
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RefSeq Acc Id:
XM_006256790 ⟹ XP_006256852
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,938,089 - 22,989,691 (+) NCBI mRatBN7.2 X 19,512,616 - 19,562,165 (+) NCBI Rnor_6.0 X 23,092,143 - 23,143,304 (-) NCBI Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI
Sequence:
TGTTCTTGGCTTTTATGTGGCGTCCACAGGTAGTACCACCCACAGCCCTCTCTCTATGTGCTCT CCTTCCTAAGACTCGTCCTAGATAAGAATGCAGTGAGCTTTGTGGAGCAGACAGGAGTCTGAAAATAGTGGCATAATGGGGCCAGAGCAGTCACTGAGAACAAAGGGATTCTAGGCTGCTGTCCCAGA AGTCCTGATATATATTCATACATGAATCTAGCCTGTAATCATGTGATTATCCGTCAGCCTTCTAGCCTATAACAAATATATTCACAACCACACATTTCAAGACTTACCAATAAGGAGACCCCATTTAT GACTTTATTGCCCATCCTATCTTGATAAAATGAGCTTCCTCACCACATTGTACATGGAGGTGGGAGCAGGCTCTATGGCCGAACATCATACTGCATAGTTTCTTCCCTAGAGATAGTTCTACTTTATG GTTCAGCCTTTAGCCCTGAGTATGAAGCTGAGTAAACCCTGTGTCTATAACCAATACATTAAAACGTCTTAGAATTTTATCATTTTATTCTGTGCCATCCTAAAGTTTTAAGGTTTTTTTTTTTTTTT GGATGTTGCTCTTTACCTCAGAAAAACCAGCTCTCCCCTGTCCATTTCCCTGAAAGCTGTCATAATATCTACCATGGTGAACTGGGATTTCTTGTCACCATGTTTATCTCTTCTGCAGCAGAGAGATG TAGATTGTGAACATGATCACTGAACAAGTGTCCTCCATATCAGAGCCCAAGATGAACAGTCAGCAGGTCACAGGGATCCGGGTCCCATCTTCAAGGAGCCCACAATCTACTTAGGTACCAGACCAGAG GAACCCCGGCTCATGTGGCAATATGAGAACTGAAAGCTAAGCTTCTCTCAAGGCTATAATACTGACTTTCAGAGAAGATGAACACTAAAACTGGTCTTAACTAAGACAGAGTTCAGTGAGAATAAAAG ATACTTCAGGCTGAGGAAGAGCCTAAAAGCAGGAAAACGCTGTGTTCGAGGGTCCTGTAATCAGCCAGTGTGGTTAAACATGGGGGAGTCCTGGGGGGTAGAAGACTGATAGGTGGCTTAGGACTTGA TTTAGAAGAAGTTTGAATGCTAGTCTGAGTCATTTCTCTAAGGCTTGTTTTTTGGTGTTTCTGAGTTCAGAATTGCTAACGGTAGTGAACAATTTCATAGTTAGTTCTAGGCAGGGTTAAATTAGGGT GTCAAACCTGGACCCTGAGTTTACCCATTCAGACCTTGTCAGAGGCCTTCTAGCTACCTAGCTCAGATTTCTTGCTACTAAAATTATCTTCTTGATTCTTGGCAGTGTTGTAAGGACAAAATTGTAAA CATAAAAGACATGTTCATGTTGTTGGCTAGATTACCTTAGACAAGCCATCCCCTCCTCAGGCCCATTTCCCTGTGCTATTACTGGGGAAGTTTCAAAGAAACAAATAAGATAAAGAAAATGTTACTTT GTGCGCACTGGAAAACATACAAAGTTACGGTAAGATCATTAAAACAGACTTCCACTAATTATGTGACTTACTAGGATTAAGAGACTCATGTCTTGCAAAGTCTCTCTCTGAGACTCTAGGAGTTATCT GCTAATCTGGAAAAAACTCATTATATTGTATTTTTTACTTTAAATTGATACATAATTGTTTATACTTGTGTGGTACAGTGCATGTATATAATGTACAATGGTTAATAGCTTTATGTATCACCTCAAAT ATCTATCATTTCTCCTTTCCACCAGCTATATTGAAGTATCCAATTATCTGTTGTGAACCATAGTTATCCAGATGTGCTCTTGAACATCAGAAGTTATTCCTCCTGTTTCCCAGAATCCATCCTGTTTG TTCTCTCTTTTCTCCCTCTCCTTTGCCCACTAGTCTATACTCAGTTTCTCACCAATCTCTTTTAGGTTTGTCCAGTAGGTGAGAGCATGTAGTATTTGATGTTTTTTGCCAGACTTAAGTTAACAGAA ACCTAGGAAGGAGTTTACCTTTCTAATTGACACTCAAGAAGTCTTTACAGTATAAATGTTAATCCCGTGTCACAATAACGTGCTAGACCTTGCAGATTACTTGGAGGGAAAAAGATGAATCAATTACT GCCCAAAGGAAACAACAGTTTGAATCATATGTATTCAGCTTCCCCAGGTTTCTTCATGTGTATCAATATATTGACTCTTCGCTAACATTGAGGGAATGGACCCTACTATCCTTATATCTAGCAATGGG CAGAAGTGAGAGTCCACCCAGACAGTATGGTTCCTAATCCCATTGTTATTGTTCTTAACTGCTGTGATCCATTGCCTCAGTAGGCTCCTTGAGATAGGTAGGCCTTGACGTTGAAAGTCTTATATGCT CAGCAACTGCAGTGAATCTAACCCTTGTATAGACTAAGGTTCTGAGAAGATATTTTAGGAAGTGTCTTAAAAGGCAAAGTAAAGCTGGGAGCATTTGAGGGCAGGGACTGGAGATTTCTTTTCCCGAG AGATTGCCCTTGCATAGTCCAGCTCAGTGGAAGAAAGTTGAGCCTCCTAATACCCAATCACTGGAGCTTTGCTGGGGGTGGGAAGGTTACAAAGAATGAAGTAAAAGGGCACTTGGACATCTTCCAGG CAAGCCATGCAGTTGCATGAATTCTACAGATAAAAGTCTGAAAATAACTGGGGGAATGGCAATAAGAGTGGGGACAAGTGAAAGGGAGACATCTGGATGAGATATCTCTGCCTGTGGATTTGTGCTAT TTAAATAGATGCCATTACCTCTTATTCCCCATAGTCTCCTCAGTGTGGTTTCCACCTCTCCTAAGATCCCATCCCAACACTTTGGCTTGAAGAGTTTTAGCACGGGTTTGAATTAGATTCTGATGCCT TTAGTGCTGGGTCATTTCAGCATTGGCAGCCATGTGAGCGACCCTTACTTATCGGCTCTCTGCCCAGCAATGGCTGCCCTCACTCTCATTCCTAAGGTGTCAGATTTACTCTGATTTATTTAACCTTG GCTGGAGAGAGTATAAAGGTGATCAGATAGTGCCAATCTCTTTGAAGTGCCCAGGACAGCTCATTTTAAGAGGGAGAGGTCCGGTAGAGAGGCAGGGAACAAACTCTAGGGAAAGACAGTTTTACAGT GCCTTGTTGAATAGGGTGAGTGGTGAGGTAGTGAAAGTCTACTTCCAGTTTGGGCCTTTAATTGCTAGCTCAAAACATTGCATTTTGATTAGGAACATTATGTTTGTGGTTTTGTTGTGGGGGGGGGG GCTTGTAATGAACCTCTGTTTCTGAGTTGGAGCTTAATGTTCTAATTAGGCCTGCTTTGAAATCAATTTCAAAGCTCAGACCTATCTCCATCACCTTTGTCATGCACACAACACAGGATGTAAGCACA TGATCTTTGGTCTTTTATTTGCATACTCTACTAGTCCTGCCTTCATTGGCGAGAAGTAACTGGCCAGACCTGGGCTGTCTTGCTGGCTGCCTTCCTTGCTGGGCTCCAACTTATCTTCTATGTACATA GCCCTTGGAGTTCAGAGGCCTCTGCTGACTTCTGCTCAGCCTCTGGCTCTCAGCACCCACATCCCCACTTGTACATCTGGGAGCAGAAGAAAAAGAGGGAGCTGGAGATAATCTGTGAGAGGCTCCGA AGCCCAGTACATCCCCCTGACTCAGCCCTGCCCACCTGCTGCTGTGACTACAGCAACAGACAAGACAGCTAGGAAGATAGGAAGTGAGGTCCAATACCTTGTGGGCAGTGGTGTCATTAGCTGCAACG CCTAAGATGTCTCGAGAGATGGGAGAACTCACTCAAACCAGGTTACAGAAGATCTGGATTCCACACAGCAGCAGTAGCAGCGTGCTGCAACGGCGAAGGGGCTTGTTTAATTTAGGTCAGTATCGACG AGAGGCAGTGAGTTACAGGAACTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAAGTATCTCAGCCGCGAGGAAGGTC ATGTTGCGGTTTTTGATGCCACCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCTTCTTTATTGAGTCTATTTGTAATGACCCCGAAATCATTGCA GAAAACATCAAGCAAGTGAAACTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATAGAGTGCTATGAGATCAACTACCAACCTTTGGATGAGGAATT GGACAGCCACCTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTACAGCCTACTACCTCATGAACATCCATGTCACACCTCGATCTA TCTACCTATGCCGCCATGGTGAGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGTATGCCTATGCACTAGCCAACTTCATCCGGTCTCAAGGCATC AGCTCCCTGAAAGTATGGACTAGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCCCTGAATGAGATTGATGCGGGTGTCTGTGAAGAGATGACCTA TGAAGAAATTCAGGAACACTACCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTATGAGGATCTGGTTCAGCGTCTTGAACCAGTTATAATGGAGC TAGAACGGCAAGAAAATGTACTGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTATCTCAAGTGTCCTCTGCATACTGTGCTCAAA CTCACACCTGTGGCTTATGGCTGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAATGTGGACATCACCCGTGAAGCTGAGGAAGCCTTGGACACTGT ACCTGCCCATTACTGAGCCCTTTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCTCCTTAAGCAGACTCTGGCTATGGCCTGAGAGTGCCCTACCT CCAGTGAAGAAGTCCGTAGCAGCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCTTTTAAATATTCTCTGATAAATAAAGATGTTTATTTCTGCCT ATAGGACAGGAAGAGGTT
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RefSeq Acc Id:
XM_006256791 ⟹ XP_006256853
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,945,313 - 22,989,691 (+) NCBI mRatBN7.2 X 19,517,775 - 19,562,165 (+) NCBI Rnor_6.0 X 23,092,143 - 23,139,419 (-) NCBI Rnor_5.0 X 23,512,672 - 23,564,431 (-) NCBI
Sequence:
GAGGGTTGTCATTTGTGGGTGGTGGTGATGGGTGGGTCTAGAAGAACAAGTGGTGTTCCCCATC CACTCCTACCCTCACAAAGAAGTTGGAATAGAAGATCATTTGGATGAAATTGCTAGAGTATAACAAGAGGCTAATATGAGAAGGGTAAGGAAGTAAGAGAAAGGCAGGTAGAAAAGACAACGATGAGG CTTAGATAAAAAGAACCCAAACTACAGGGACCCCTGACCTAAGGGCTGTCTCCCTTTATTTGAGAAACGGTCGGAATGCTTCTTGTCTGGAATGCGAGCGTTCTAGTGTAGTGTTACCCGAGAGTATT TTATTTTAGCTTCTCTTATGAAAGCTCTGGAAACAGGTCTTGTTTAATTTATGCCAGGGTGAAAGAAGGTGATAGTTCCTGGCGTGGTTTCTCGGAGGCTAGGTGCTTAGTCCACACCAGTACCGTGT CACTGCTCAGCATTGCCCTTCCTCTTCCACCATCCTCTTAAAAATAACTGTACCTGCCCCAGCTGGGGACAACTGCGTACTTGGCCTTGACATTCAGAGACAGTCTTGCTGTTCTGAGGAGTCGAGGG GACAGACAGTATCACAAAGACTGATCTGGTGTTCAGTTGGAGCTTAACATCCTAATTAGACCTGATGTCTTTATTTTAAAACTCAGGCCTTTGAAATTTTAAGGAGGAGCAGAGGCAAAGTAAGCAAA GCTTGTAAATAGGCTTTGAAACCGAACAATGTCTCATAGATAAGCAGGGATAATCACTCGACAAGGTGTTTGCAGCCCAGCTGGAGAAACCAGAAGGGGGCTAGAGATAAGACATCTGTGGACTGCAG GACTCTCGGATAGCTTGAGCAGCAGCTGAGGAAGTGGCCCGACTCTTAATGTTAAAGGAGGGGTAGGCCTAAGGCATTTGTGGAGCAATACTTCCTAATATTAGATTAGTACATAGGATGAAGGATGT GTATAGAAGAAGCAGAGTGGAGGATAAAATCCAGAAATCGGTTCTCCATTGTTTTCTCCATCAGCAATTCTGGAGATATTGGAGTTTGGATGAGATAGAATGAGGTTCTGTATGCATAGGTCTTCCAG AGTAAAAACCCTTATATTCTTGAGAAATCTGCCTTCCAAGTCGGAGGGGCAATATACATTCATGAGTTTGCAGTCACATAGAAGATACAGGATGGAGCTGACTATGACCAATACTCAGGAGGCAGATT CAGAAGGACTTGCTAAGTTTGAGAGCCGGTCTTAGCTTCACAGGAGGTTCTCAACCAGCAGGGCTATACAGTAAGGCTCTACCTCAAAAGCAATACAAGAACAACTGCCATTCCACAGAACAGAAAAA AAATATGTGTTTATTTAAAATCTGAGCTCCACATTCCTTAATTGTACATAAGAGTAATACTGACCAGATGTAAAACTGCGTAGCTTTGAGCCCCACCTCCTGTCTTTGTAAACTGAGACGAGCCTTGT TTTGCTTCTGTTCCCTCACCTGTAAACTGATGTTGCTAGCAGTACTGTTGAAAAGATTAGATACACCGAAGCAGGTAATGTGCTCAGAAAAATGACCATCCCATTGTATGTACTTAGTAAACAAAAGC ATGGTTACCTGCCCTTTATTCAATATCACACCCAGCATCAAGTCCTGATCCTGGCCCAGCACAGATGCTATTGGCTGCTTTTACTTTTACCATCATTCTGTGTACCCAAGATACTCCTTAGGGAATAA CTAAATTGTTACTATAAGCATTACTTTTGTAGAAAATTGTTTTATAGTAGTTTGATGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATTGGTTTTGTATAGGGTATT TGTATTTGATAAACCTAGTAAACTTTCTTATTAGTTTTGGTAATTTCTGTGCAAACTGCAGCTTTTATGTTTTCCAGAAATCTTTATCCTTATGATTCTTAAATATCTTTTTTCTTATATTAATATGC TGCTAAGATATCTCGCTTCTAGAACATGCACACACAGACATCCACACACGACTGCATCCACATGCACGCACATACACTTATGCTTGCAGGTGTATCCACACACATACAGTACAATGTTAAAAGTTTAT TAATAGTGTGTATTCATAAGTTGATCATAATTTTAAAGATACTTTTTTAAGTTAGATCATTGTGTAATTAAATGAAGGCTTTTTTTGCAGCTATCTCTTAAGAGAGTAAGGAAGGGTTTTTTTAATTT ATAATTTGGCATAGTTTTTAAAAAGTGAATTGGTGTTGAAACGAATGTATAGGATATTTTTTCTAAATCTATTTCTATACAGCACGATTCTTTTTAATTTTAACTTTTTTTTTGTGCTACATGTGTTT TCCTTTTTATGAGCTAATCTTGCAGTCCTGGGGCATAAAAGTACTTTAGATTTAGTTCACTAAAATTTTGTTCTGTTGTTGAGTATTTTCTTCAGGAGACTTAATATTCTCATGTTGTCCTTCTCTGG TTTTGATGTCAAGGTTATACTAACATCATGCAATGAGGTGAGAACTATTTTCTTTCATTCCATCTCTGACAAAGTTTGTCCCAGAACTATCTGTTCCTCAAATATTTGGCAGAACTTTCAGATCAAAC AGTCTAGTCCTAGTGTGGCTTTGAAACCATTTAACTGTTACAGTTTCTCTGAAAGTTATGGATTTTTTTTGTTTGTTTGTTTGCTACTTGTACTTAGACTTAGTAAGTTAAGATTTTCTGGGAATTTT TTATTTCACAAGTTTTCAAGTTGATGTAAAGTTTGTATGTGCCTCTAAAAACCTTTGTTGTCTTGTTATATGTTCTTTTTCTAAGACTTATTTTTTTATTTTTTATTGAAAAAACAACTTTTTCACAC AATACACTCTCTAACAACATTGTTCACTTGTACCTCTGTTTTATTCCCTTGACAAATATTGTGAACAGTTTATCCGTTTTTTGGTTTTCTAAAAAAAGAAAAATGAGCCTCCTTTTTTAAGCTTCATT TTTTTTGTTTGTTCCCGTCCTGTCTTTATTTTTGCTTAATTATCTTTCTAGTGGCTATTCATAGCTTGTTCTCATTGAATATTTTTTAAGTAATGGAGTTAGATTATTTTCAAGCTTTCTCCTTTTCT GATCTACAGTTGACCTAGTAAACAGGGCCTGTGTTCTGTGTATGCATAAATCTTCCCAGACCATTCGAGAAACAGACCTTACCATAGACTTACATAATCTGTCACTCACCAAGTTGCCCAGTTGTCAT CATGGCTTCAGTCTGTACTCCAGGACACTAGGCCCCCGTGGATTGCCGTGTGGAGCAGCTAAGAGGTTAATGCTCGGAGCAGCAGGACTCCCCTTGGACCTCCATACCACAGTTCACTAATTCTCCCA CGATGGTGATCATGGTGGGTTTACCAGCTCGAGGCAAGACCTACATCTCTACGAAGCTCACACGCTATCTCAACTGGATAGGAACACCAACTAAAGTGTTTAATTTAGGTCAGTATCGACGAGAGGCA GTGAGTTACAGGAACTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAAGTATCTCAGCCGCGAGGAAGGTCATGTTGC GGTTTTTGATGCCACCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCTTCTTTATTGAGTCTATTTGTAATGACCCCGAAATCATTGCAGAAAACA TCAAGCAAGTGAAACTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATAGAGTGCTATGAGATCAACTACCAACCTTTGGATGAGGAATTGGACAGC CACCTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTACAGCCTACTACCTCATGAACATCCATGTCACACCTCGATCTATCTACCT ATGCCGCCATGGTGAGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGTATGCCTATGCACTAGCCAACTTCATCCGGTCTCAAGGCATCAGCTCCC TGAAAGTATGGACTAGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCCCTGAATGAGATTGATGCGGGTGTCTGTGAAGAGATGACCTATGAAGAA ATTCAGGAACACTACCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTATGAGGATCTGGTTCAGCGTCTTGAACCAGTTATAATGGAGCTAGAACG GCAAGAAAATGTACTGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTATCTCAAGTGTCCTCTGCATACTGTGCTCAAACTCACAC CTGTGGCTTATGGCTGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAATGTGGACATCACCCGTGAAGCTGAGGAAGCCTTGGACACTGTACCTGCC CATTACTGAGCCCTTTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCTCCTTAAGCAGACTCTGGCTATGGCCTGAGAGTGCCCTACCTCCAGTGA AGAAGTCCGTAGCAGCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCTTTTAAATATTCTCTGATAAATAAAGATGTTTATTTCTGCCTATAGGAC AGGAAGAGGTT
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RefSeq Acc Id:
XM_008773123 ⟹ XP_008771345
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,936,079 - 22,989,691 (+) NCBI mRatBN7.2 X 19,508,551 - 19,562,165 (+) NCBI Rnor_6.0 X 23,092,149 - 23,145,852 (-) NCBI
Sequence:
CAGGAAGCTGAGGCAGGGTCAGTAATGAATTCAAGGCCAGCCTGGGCTACATAGCAAGACCCAG TCCAAAACTTGGGAAGAGTAACTGGATAAACCAGGAAGAGGCACTGAAGCTAAGTAGAAGTTGAATAAATTCGTCTCAGCCTCACAGAAGTTATAGAGCCAAGATTTAAGCCCTTCTTAATCAGCCTT CCCAGGAACCAACGGATGTCTCCGAGTTTTCTATTTGATGCCACCCACCGGACCTGCTTTGGGGGTCTGTAAATGCAAGAGAGCCATTGGAAAATTAGCGATGGAAGAAAAAGCCTCTAAGAGAACAG CCTCCATACCACAGTTCACTAATTCTCCCACGATGGTGATCATGGTGGGTTTACCAGCTCGAGGCAAGACCTACATCTCTACGAAGCTCACACGCTATCTCAACTGGATAGGAACACCAACTAAAGTG TTTAATTTAGGTCAGTATCGACGAGAGGCAGTGAGTTACAGGAACTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAA GTATCTCAGCCGCGAGGAAGGTCATGTTGCGGTTTTTGATGCCACCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCTTCTTTATTGAGTCTATTT GTAATGACCCCGAAATCATTGCAGAAAACATCAAGCAAGTGAAACTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATAGAGTGCTATGAGATCAAC TACCAACCTTTGGATGAGGAATTGGACAGCCACCTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTACAGCCTACTACCTCATGAA CATCCATGTCACACCTCGATCTATCTACCTATGCCGCCATGGTGAGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGTATGCCTATGCACTAGCCA ACTTCATCCGGTCTCAAGGCATCAGCTCCCTGAAAGTATGGACTAGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCCCTGAATGAGATTGATGCG GGTGTCTGTGAAGAGATGACCTATGAAGAAATTCAGGAACACTACCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTATGAGGATCTGGTTCAGCG TCTTGAACCAGTTATAATGGAGCTAGAACGGCAAGAAAATGTACTGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTATCTCAAGT GTCCTCTGCATACTGTGCTCAAACTCACACCTGTGGCTTATGGCTGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAATGTGGACATCACCCGTGAA GCTGAGGAAGCCTTGGACACTGTACCTGCCCATTACTGAGCCCTTTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCTCCTTAAGCAGACTCTGGC TATGGCCTGAGAGTGCCCTACCTCCAGTGAAGAAGTCCGTAGCAGCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCTTTTAAATATTCTCTGATA AATAAAGATGTTTATTTCTGCCTATAGGACAGGAA
hide sequence
RefSeq Acc Id:
XM_008773124 ⟹ XP_008771346
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,936,038 - 22,989,691 (+) NCBI mRatBN7.2 X 19,508,522 - 19,562,165 (+) NCBI Rnor_6.0 X 23,092,149 - 23,145,923 (-) NCBI
Sequence:
CGGGAGACGGAGCTGAGGTGGAGGCTGTAGGAAAATCGGGCTTGGTCATTCAAGCCTGTAAGCC CATTACTCAGGAAGCTGAGGCAGGGATAAACCAGGAAGAGGCACTGAAGCTAAGTAGAAGTTGAATAAATTCGTCTCAGCCTCACAGAAGTTATAGAGCCAAGATTTAAGCCCTTCTTAATCAGCCTT CCCAGGAACCAACGGATGTCTCCGAGTTTTCTATTTGATGCCACCCACCGGACCTGCTTTGGGGGTCTGTAAATGCAAGAGAGCCATTGGAAAATTAGCGATGGAAGAAAAAGCCTCTAAGAGAACAG CCTCCATACCACAGTTCACTAATTCTCCCACGATGGTGATCATGGTGGGTTTACCAGCTCGAGGCAAGACCTACATCTCTACGAAGCTCACACGCTATCTCAACTGGATAGGAACACCAACTAAAGTG TTTAATTTAGGTCAGTATCGACGAGAGGCAGTGAGTTACAGGAACTATGAATTCTTTCGCCCAGACAACACAGAGGCCCAGCTTATCAGGAAGCAGTGTGCTCTAGCAGCCCTAAAGGATGTCCATAA GTATCTCAGCCGCGAGGAAGGTCATGTTGCGGTTTTTGATGCCACCAACACTACCAGAGAACGACGATCGTTGATTCTACAGTTTGCTAAGGAACATGGTTATAAGGTCTTCTTTATTGAGTCTATTT GTAATGACCCCGAAATCATTGCAGAAAACATCAAGCAAGTGAAACTTGGTAGTCCTGATTACATAGACTGTGACCAAGAAAAGGTTTTGGAAGACTTTCTAAAGAGAATAGAGTGCTATGAGATCAAC TACCAACCTTTGGATGAGGAATTGGACAGCCACCTGTCCTACATCAAGATCTTCGACGTGGGCACACGCTACATGGTAAATCGAGTGCAGGACCACGTTCAGAGCCGTACAGCCTACTACCTCATGAA CATCCATGTCACACCTCGATCTATCTACCTATGCCGCCATGGTGAGAGTGAACTCAACCTTAGAGGCCGCATTGGAGGTGACTCTGGCCTCTCAGCTCGGGGCAAGCAGTATGCCTATGCACTAGCCA ACTTCATCCGGTCTCAAGGCATCAGCTCCCTGAAAGTATGGACTAGCCACATGAAGAGGACCATTCAGACCGCTGAAGCCCTAGGTGTCCCCTATGAACAGTGGAAGGCCCTGAATGAGATTGATGCG GGTGTCTGTGAAGAGATGACCTATGAAGAAATTCAGGAACACTACCCTGAGGAATTTGCACTACGGGACCAGGATAAATATCGTTACCGCTATCCCAAGGGAGAGTCCTATGAGGATCTGGTTCAGCG TCTTGAACCAGTTATAATGGAGCTAGAACGGCAAGAAAATGTACTGGTGATCTGTCACCAGGCTGTCATGCGGTGCCTCCTGGCATACTTCCTGGATAAAAGTTCAGATGAGCTGCCCTATCTCAAGT GTCCTCTGCATACTGTGCTCAAACTCACACCTGTGGCTTATGGCTGCAGAGTGGAGTCCATCTACCTGAATGTGGAGGCTGTGAACACACACCGGGACAAGCCTGAGAATGTGGACATCACCCGTGAA GCTGAGGAAGCCTTGGACACTGTACCTGCCCATTACTGAGCCCTTTTCAAGTGATCAGATTGTCTCTGTTCTCACCCCCTTCCTCCTGTAGGAGCTGCTGCCCTTGTTCTCCTTAAGCAGACTCTGGC TATGGCCTGAGAGTGCCCTACCTCCAGTGAAGAAGTCCGTAGCAGCTCCCAAACAGGTCTCAATTCCTAGCCACAACTAAGGCACCTACCTAGTTGTGGATAAAGTTCCTTTTAAATATTCTCTGATA AATAAAGATGTTTATTTCTGCCTATAGGACAGGAA
hide sequence
RefSeq Acc Id:
XM_039099481 ⟹ XP_038955409
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,938,075 - 22,981,413 (+) NCBI mRatBN7.2 X 19,512,606 - 19,553,895 (+) NCBI
RefSeq Acc Id:
XM_039099483 ⟹ XP_038955411
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 X 22,938,055 - 22,974,379 (+) NCBI mRatBN7.2 X 19,512,590 - 19,546,855 (+) NCBI
RefSeq Acc Id:
NP_036753 ⟸ NM_012621
- Peptide Label:
isoform 1
- UniProtKB:
P16119 (UniProtKB/Swiss-Prot), P07953 (UniProtKB/Swiss-Prot), A6KL80 (UniProtKB/TrEMBL), C9DRP4 (UniProtKB/TrEMBL)
- Sequence:
MSREMGELTQTRLQKIWIPHSSSSSVLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYRNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVA VFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENIKQVKLGSPDYIDCDQEKVLEDFLKRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHVQSRTAYYLMNIHVTPRSIYL CRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELER QENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCRVESIYLNVEAVNTHRDKPENVDITREAEEALDTVPAHY
hide sequence
RefSeq Acc Id:
NP_001257992 ⟸ NM_001271063
- Peptide Label:
isoform 2
- UniProtKB:
A0A0H2UH89 (UniProtKB/TrEMBL), A6KL78 (UniProtKB/TrEMBL), C9DRP4 (UniProtKB/TrEMBL)
- Sequence:
MPPTGPALGVCKCKRAIGKLAMEEKASKRTASIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYRNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVF DATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENIKQVKLGSPDYIDCDQEKVLEDFLKRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHVQSRTAYYLMNIHVTPRSIYLCR HGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE NVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCRVESIYLNVEAVNTHRDKPENVDITREAEEALDTVPAHY
hide sequence
RefSeq Acc Id:
NP_001257993 ⟸ NM_001271064
- Peptide Label:
isoform 3
- UniProtKB:
A0A0G2K0S8 (UniProtKB/TrEMBL), C9DRP4 (UniProtKB/TrEMBL)
- Sequence:
MPPTGPALGVCKCKRAIGKLAMEEKASKRTVFNLGQYRREAVSYRNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENIK QVKLGSPDYIDCDQEKVLEDFLKRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHVQSRTAYYLMNIHVTPRSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLK VWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPV AYGCRVESIYLNVEAVNTHRDKPENVDITREAEEALDTVPAHY
hide sequence
RefSeq Acc Id:
XP_006256852 ⟸ XM_006256790
- Peptide Label:
isoform X2
- Sequence:
MSREMGELTQTRLQKIWIPHSSSSSVLQRRRGLFNLGQYRREAVSYRNYEFFRPDNTEAQLIRK QCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENIKQVKLGSPDYIDCDQEKVLEDFLKRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQD HVQSRTAYYLMNIHVTPRSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY PKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCRVESIYLNVEAVNTHRDKPENVDITREAEEALDTVPAHY
hide sequence
RefSeq Acc Id:
XP_006256853 ⟸ XM_006256791
- Peptide Label:
isoform X3
- UniProtKB:
C9DRP4 (UniProtKB/TrEMBL)
- Sequence:
MVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYRNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENI KQVKLGSPDYIDCDQEKVLEDFLKRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHVQSRTAYYLMNIHVTPRSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSL KVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTP VAYGCRVESIYLNVEAVNTHRDKPENVDITREAEEALDTVPAHY
hide sequence
RefSeq Acc Id:
XP_008771346 ⟸ XM_008773124
- Peptide Label:
isoform X1
- Sequence:
MPPTGPALGVCKCKRAIGKLAMEEKASKRTASIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL NWIGTPTKVFNLGQYRREAVSYRNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENIKQVKLGSPDYIDCDQEKVLEDFL KRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHVQSRTAYYLMNIHVTPRSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQTAEALGVPYEQ WKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCRVESIYLNVEAVNTHRDK PENVDITREAEEALDTVPAHY
hide sequence
RefSeq Acc Id:
XP_008771345 ⟸ XM_008773123
- Peptide Label:
isoform X1
- UniProtKB:
A0A0H2UH89 (UniProtKB/TrEMBL), A6KL78 (UniProtKB/TrEMBL), C9DRP4 (UniProtKB/TrEMBL)
- Sequence:
MPPTGPALGVCKCKRAIGKLAMEEKASKRTASIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL NWIGTPTKVFNLGQYRREAVSYRNYEFFRPDNTEAQLIRKQCALAALKDVHKYLSREEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPEIIAENIKQVKLGSPDYIDCDQEKVLEDFL KRIECYEINYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHVQSRTAYYLMNIHVTPRSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQTAEALGVPYEQ WKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCRVESIYLNVEAVNTHRDK PENVDITREAEEALDTVPAHY
hide sequence
Ensembl Acc Id:
ENSRNOP00000035212 ⟸ ENSRNOT00000033656
Ensembl Acc Id:
ENSRNOP00000000178 ⟸ ENSRNOT00000000178
Ensembl Acc Id:
ENSRNOP00000071567 ⟸ ENSRNOT00000081239
RefSeq Acc Id:
XP_038955411 ⟸ XM_039099483
- Peptide Label:
isoform X5
- UniProtKB:
Q5Y297 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038955409 ⟸ XM_039099481
- Peptide Label:
isoform X4
Ensembl Acc Id:
ENSRNOP00000093099 ⟸ ENSRNOT00000102413
RGD ID: 13701775
Promoter ID: EPDNEW_R12299
Type: initiation region
Name: Pfkfb1_1
Description: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 X 23,139,771 - 23,139,831 EPDNEW
BioCyc Gene
G2FUF-2810
BioCyc
BioCyc Pathway
PWY66-423 [fructose 2,6-bisphosphate biosynthesis]
BioCyc
BioCyc Pathway Image
PWY66-423
BioCyc
Ensembl Genes
ENSRNOG00000000165
Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript
ENSRNOT00000000178
ENTREZGENE
ENSRNOT00000033656
ENTREZGENE
ENSRNOT00000033656.3
UniProtKB/Swiss-Prot
ENSRNOT00000081239
ENTREZGENE
ENSRNOT00000174108
ENTREZGENE
Gene3D-CATH
3.40.50.1240
UniProtKB/Swiss-Prot
3.40.50.300
UniProtKB/Swiss-Prot
InterPro
6Pfruct_kin
UniProtKB/Swiss-Prot
6Phosfructo_kin
UniProtKB/Swiss-Prot
His_Pase_superF_clade-1
UniProtKB/Swiss-Prot
His_PPase_superfam
UniProtKB/Swiss-Prot
P-loop_NTPase
UniProtKB/Swiss-Prot
PG/BPGM_mutase_AS
UniProtKB/Swiss-Prot
KEGG Report
rno:24638
UniProtKB/Swiss-Prot
NCBI Gene
24638
ENTREZGENE
PANTHER
6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE 1
UniProtKB/Swiss-Prot
PTHR10606
UniProtKB/Swiss-Prot
Pfam
6PF2K
UniProtKB/Swiss-Prot
His_Phos_1
UniProtKB/Swiss-Prot
PhenoGen
Pfkfb1
PhenoGen
PIRSF
6PFK_2-Ptase
UniProtKB/Swiss-Prot
PRINTS
6PFRUCTKNASE
UniProtKB/Swiss-Prot
PROSITE
PG_MUTASE
UniProtKB/Swiss-Prot
RatGTEx
ENSRNOG00000000165
RatGTEx
SMART
PGAM
UniProtKB/Swiss-Prot
Superfamily-SCOP
SSF52540
UniProtKB/Swiss-Prot
SSF53254
UniProtKB/Swiss-Prot
UniProt
A0A0G2K0S8
ENTREZGENE, UniProtKB/TrEMBL
A0A0H2UH89
ENTREZGENE, UniProtKB/TrEMBL
A0A8I6AF58_RAT
UniProtKB/TrEMBL
A6KL78
ENTREZGENE, UniProtKB/TrEMBL
A6KL80
ENTREZGENE, UniProtKB/TrEMBL
A6KL81_RAT
UniProtKB/TrEMBL
C9DRP4
ENTREZGENE, UniProtKB/TrEMBL
F261_RAT
UniProtKB/Swiss-Prot, ENTREZGENE
P16119
ENTREZGENE
Q5Y297
ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary
P16119
UniProtKB/Swiss-Prot
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2003-04-09
Pfkfb1
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1
Name updated
629478
APPROVED
2002-06-10
Pfkfb1
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1
Name updated
70584
APPROVED
Note Type
Note
Reference
gene_regulation
cAMP-dependent protein kinase mediates activity of liver isozyme, but not of muscle isozyme
729562
gene_transcript
encodes two isozymes by alternative splicing from two promoters
729562