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Gene: Mobp (myelin-associated oligodendrocyte basic protein) Rattus norvegicus

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Symbol:

Mobp

Name:

myelin-associated oligodendrocyte basic protein

RGD ID:

3101

Description:

A structural constituent of myelin sheath. Involved in central nervous system myelin formation. Predicted to be located in mitochondrion. Biomarker of hypothyroidism. Human ortholog(s) of this gene implicated in frontotemporal dementia. Orthologous to human MOBP (myelin associated oligodendrocyte basic protein); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC105491; Mobp81; Mobp81p; myelin-associated oligodendrocytic basic protein; Myelin-associated/Oligodendrocytic Basic Protein-81; RNMOBP81P

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	128,747,232 - 128,777,936 (+)	Ensembl				GRCr8
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	119,869,626 - 119,899,563 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	125,449,916 - 125,475,469 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	123,648,952 - 123,674,506 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	121,489,423 - 121,515,242 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	128,824,420 - 128,854,492 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	128,824,508 - 128,850,358 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	128,025,119 - 128,055,171 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	125,118,618 - 125,144,099 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	119,014,616 - 119,040,060 (+)	NCBI		Celera
RGSC_v3.1	8	125,138,354 - 125,163,833 (+)	NCBI
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amyotrophic lateral sclerosis (ISO)

angiostrongyliasis (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

frontotemporal dementia (ISO)

hypothyroidism (IEP)

Oxygen-Induced Retinopathy (IEP)

progressive supranuclear palsy (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

17beta-estradiol (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

all-trans-retinoic acid (ISO)

amitrole (EXP)

ammonium chloride (EXP)

benzene (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

calcidiol (EXP)

capsaicin (EXP)

CGP 52608 (ISO)

chlorpyrifos (EXP)

clozapine (ISO)

cocaine (EXP)

Cuprizon (EXP)

dibutyl phthalate (EXP)

ethanol (ISO)

fenvalerate (EXP)

flavonoids (EXP)

gentamycin (EXP)

glycidol (EXP)

glyphosate (ISO)

graphite (EXP)

lidocaine (EXP)

mechlorethamine (ISO)

mercury dichloride (ISO)

methimazole (EXP)

methotrexate (ISO)

mono(2-ethylhexyl) phthalate (ISO)

paracetamol (ISO)

PCB138 (ISO)

phencyclidine (ISO)

pirinixic acid (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

trichloroethene (EXP)

valproic acid (EXP,ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

central nervous system myelin formation (IEP)

nervous system development (IEP)

Cellular Component

cytoplasmic ribonucleoprotein granule (ISO)

mitochondrion (ISO)

perinuclear region of cytoplasm (IEA)

Molecular Function

protein binding (ISO)

structural constituent of myelin sheath (IDA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Selective effect of hypothyroidism on expression of myelin markers during development.	Barradas PC, etal., J Neurosci Res. 2001 Oct 15;66(2):254-61. doi: 10.1002/jnr.1218.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Myelin-associated oligodendrocytic basic protein mRNAs reside at different subcellular locations.	Gould RM, etal., J Neurochem 1999 Nov;73(5):1913-24.
4.	Developmental expression of the myelin gene MOBP in the rat nervous system.	Holz A and Schwab ME, J Neurocytol. 1997 Jul;26(7):467-77. doi: 10.1023/a:1018529323734.
5.	Myelin-associated oligodendrocytic basic protein: identification of an encephalitogenic epitope and association with multiple sclerosis.	Holz A, etal., J Immunol. 2000 Jan 15;164(2):1103-9. doi: 10.4049/jimmunol.164.2.1103.
6.	Molecular and developmental characterization of novel cDNAs of the myelin-associated/oligodendrocytic basic protein.	Holz A, etal., J Neurosci 1996 Jan 15;16(2):467-77.
7.	Myelin oligodendrocyte basic protein and prognosis in behavioral-variant frontotemporal dementia.	Irwin DJ, etal., Neurology. 2014 Aug 5;83(6):502-9. doi: 10.1212/WNL.0000000000000668. Epub 2014 Jul 3.
8.	Gene expression changes in a rat model of oxygen-induced retinopathy.	Lee NE, etal., Korean J Ophthalmol. 2011 Feb;25(1):42-7. doi: 10.3341/kjo.2011.25.1.42. Epub 2011 Jan 17.
9.	Alterations of myelin proteins in inflammatory demyelination of BALB/c mice caused by Angiostrongylus cantonensis.	Lin KY, etal., Vet Parasitol. 2010 Jul 15;171(1-2):74-80. doi: 10.1016/j.vetpar.2010.03.019. Epub 2010 Mar 30.
10.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
11.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
12.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
13.	Cloning and expression of myelin-associated oligodendrocytic basic protein. A novel basic protein constituting the central nervous system myelin.	Yamamoto Y, etal., J Biol Chem 1994 Dec 16;269(50):31725-30.

Additional References at PubMed

PMID:10077700	PMID:12477932	PMID:15489334	PMID:15625715	PMID:17634366	PMID:18614015	PMID:22871113

Genomics

Comparative Map Data

Mobp
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	128,747,232 - 128,777,936 (+)	Ensembl				GRCr8
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	119,869,626 - 119,899,563 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	125,449,916 - 125,475,469 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	123,648,952 - 123,674,506 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	121,489,423 - 121,515,242 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	128,824,420 - 128,854,492 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	128,824,508 - 128,850,358 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	128,025,119 - 128,055,171 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	125,118,618 - 125,144,099 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	119,014,616 - 119,040,060 (+)	NCBI		Celera
RGSC_v3.1	8	125,138,354 - 125,163,833 (+)	NCBI
Cytogenetic Map	8	q32	NCBI

MOBP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	39,467,680 - 39,529,497 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	39,467,172 - 39,529,479 (+)	Ensembl			hg38	GRCh38
GRCh37	3	39,509,171 - 39,570,988 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	39,484,074 - 39,542,863 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	39,518,557 - 39,540,989	NCBI
Celera	3	39,450,698 - 39,509,485 (+)	NCBI		Celera
Cytogenetic Map	3	p22.1	NCBI
HuRef	3	39,552,592 - 39,614,603 (+)	NCBI		HuRef
CHM1_1	3	39,460,108 - 39,522,029 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	39,480,633 - 39,542,424 (+)	NCBI		T2T-CHM13v2.0

Mobp
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	119,978,740 - 120,010,554 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	119,978,773 - 120,010,550 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	120,149,742 - 120,181,488 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	120,149,707 - 120,181,484 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	120,058,860 - 120,085,209 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	119,998,440 - 120,030,182 (+)	NCBI		MGSCv36	mm8
Celera	9	120,618,557 - 120,644,888 (+)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI
cM Map	9	71.41	NCBI

Mobp
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	29,914,118 - 29,925,176 (-)	Ensembl
ChiLan1.0	NW_004955420	29,902,036 - 29,957,364 (-)	NCBI	ChiLan1.0	ChiLan1.0

MOBP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	39,427,476 - 39,494,355 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	39,432,238 - 39,499,116 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	39,372,102 - 39,450,066 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	39,651,728 - 39,715,632 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	39,688,104 - 39,699,486 (+)	Ensembl			panPan2	panpan1.1

MOBP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	9,121,277 - 9,176,128 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	9,121,319 - 9,161,972 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	9,156,665 - 9,211,227 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	9,406,125 - 9,460,980 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	9,406,083 - 9,460,975 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	9,219,099 - 9,273,643 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	9,362,022 - 9,416,643 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	9,355,681 - 9,409,917 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mobp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	195,525,415 - 195,572,004 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	28,689,242 - 28,697,772 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	28,663,986 - 28,709,394 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MOBP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	13	24,138,078 - 24,186,838 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	26,450,254 - 26,497,554 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MOBP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	1,041,714 - 1,077,514 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	1,041,783 - 1,079,241 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	166,166,889 - 166,222,254 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mobp
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	78,762,075 - 78,773,422 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624730	78,759,681 - 78,794,632 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mobp
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	111,373,832 - 111,391,941 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	415
Count of miRNA genes:	236
Interacting mature miRNAs:	277
Transcripts:	ENSRNOT00000025279, ENSRNOT00000025343, ENSRNOT00000041868
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	102413464	132782436	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	103375781	129871912	Rat
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	105462581	132782436	Rat
634332	Pia18	Pristane induced arthritis QTL 18	4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	84192326	132782436	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	85348065	130348065	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	91340911	131690273	Rat
10450865	Bw175	Body weight QTL 175	4.1		total fat pad mass (VT:0015008)	adipose tissue molecular composition measurement (CMO:0000484)	8	84192326	129192326	Rat

Markers in Region

D8Wox13

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	119,893,153 - 119,893,319 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,848,035 - 128,848,200	NCBI	Rnor6.0
Rnor_5.0	8	128,048,720 - 128,048,885	UniSTS	Rnor5.0
RGSC_v3.4	8	125,141,773 - 125,141,938	UniSTS	RGSC3.4
Celera	8	119,038,304 - 119,038,469	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH127596

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	128,772,812 - 128,773,021 (+)	Marker Load Pipeline
mRatBN7.2	8	119,895,179 - 119,895,388 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,850,061 - 128,850,269	NCBI	Rnor6.0
Rnor_5.0	8	128,050,746 - 128,050,954	UniSTS	Rnor5.0
RGSC_v3.4	8	125,143,799 - 125,144,007	UniSTS	RGSC3.4
Celera	8	119,039,760 - 119,039,968	UniSTS
RH 3.4 Map	8	1286.9	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH144588

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	119,891,405 - 119,891,565 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,846,289 - 128,846,448	NCBI	Rnor6.0
Rnor_5.0	8	128,046,974 - 128,047,133	UniSTS	Rnor5.0
RGSC_v3.4	8	125,140,027 - 125,140,186	UniSTS	RGSC3.4
Celera	8	119,036,558 - 119,036,717	UniSTS
RH 3.4 Map	8	1286.9	UniSTS
Cytogenetic Map	8	q32	UniSTS

BG376552

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	119,887,635 - 119,887,782 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,842,519 - 128,842,665	NCBI	Rnor6.0
Rnor_5.0	8	128,043,204 - 128,043,350	UniSTS	Rnor5.0
RGSC_v3.4	8	125,136,257 - 125,136,403	UniSTS	RGSC3.4
Celera	8	119,032,788 - 119,032,934	UniSTS
RH 3.4 Map	8	1287.0	UniSTS
Cytogenetic Map	8	q32	UniSTS

BI281206

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	119,899,047 - 119,899,198 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,853,929 - 128,854,079	NCBI	Rnor6.0
Rnor_5.0	8	128,054,614 - 128,054,764	UniSTS	Rnor5.0
RGSC_v3.4	8	125,147,667 - 125,147,817	UniSTS	RGSC3.4
Celera	8	119,043,628 - 119,043,778	UniSTS
RH 3.4 Map	8	1314.4	UniSTS
Cytogenetic Map	8	q32	UniSTS

Mobp

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	119,887,003 - 119,887,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,841,887 - 128,842,609	NCBI	Rnor6.0
Rnor_5.0	8	128,042,572 - 128,043,294	UniSTS	Rnor5.0
RGSC_v3.4	8	125,135,625 - 125,136,347	UniSTS	RGSC3.4
Celera	8	119,032,156 - 119,032,878	UniSTS
Cytogenetic Map	8	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	9	32	141	60	58	28	42	28	6	186	104	9	115	37	65	30	3	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001389272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001389273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_012720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_356705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_594173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_594174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF157498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC087694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC161856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D28110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D28111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X87900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X89637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X89638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X90402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000025279 ⟹ ENSRNOP00000025279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	128,747,250 - 128,773,055 (+)	Ensembl
mRatBN7.2 Ensembl	8	119,869,626 - 119,887,856 (+)	Ensembl
Rnor_6.0 Ensembl	8	128,829,680 - 128,842,739 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000025343 ⟹ ENSRNOP00000025344

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	119,869,628 - 119,894,869 (+)	Ensembl
Rnor_6.0 Ensembl	8	128,824,508 - 128,850,358 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104512 ⟹ ENSRNOP00000080049

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	128,747,274 - 128,777,196 (+)	Ensembl
mRatBN7.2 Ensembl	8	119,869,644 - 119,899,563 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000130926 ⟹ ENSRNOP00000112149

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	128,747,232 - 128,777,236 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148240 ⟹ ENSRNOP00000105313

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	128,747,232 - 128,777,936 (+)	Ensembl

RefSeq Acc Id:

NM_001389272 ⟹ NP_001376201

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,232 - 128,765,494 (+)	NCBI
mRatBN7.2	8	119,869,602 - 119,887,859 (+)	NCBI

RefSeq Acc Id:

NM_001389273 ⟹ NP_001376202

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,232 - 128,765,494 (+)	NCBI
mRatBN7.2	8	119,869,602 - 119,887,859 (+)	NCBI

RefSeq Acc Id:

NM_012720 ⟹ NP_036852

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,232 - 128,773,113 (+)	NCBI
mRatBN7.2	8	119,869,602 - 119,895,480 (+)	NCBI
Rnor_6.0	8	128,824,508 - 128,850,361 (+)	NCBI
Rnor_5.0	8	128,025,119 - 128,055,171 (+)	NCBI
RGSC_v3.4	8	125,118,618 - 125,144,099 (+)	RGD
Celera	8	119,014,616 - 119,040,060 (+)	RGD

Sequence:

show sequence

AGGGAACCTTTCACAGCAGCCAATACCTGCAGGGCAACAAAGAATCAAATGAGAGCGAGACAAG
CTGGGAATGAAGTCCTGGTTGCCAGATGGGAGCTTGAAAACACAGTAAGATGAGTCAAAAAGTG
GCCAAGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTCAGAGCACTTCAGCATCCACTGCT
GCCCACCCTTCACCTTCCTCAACTCCAAGCGTGAGATCGTGGACCGCAAGTACAGCATCTGCAA
GAGCGGTTGCTTTTACCAGAAGAAGGAGGAGGACTGGATCTGCTGTGCCTGCCAGAAGACCAGA
TTGAGAAGGAGGAGCAGGTCAACCCCAAGAAAAAAGTGACCGAGAAGGGACTTCTCGTGAATGG
ACAGCCTCTGCTTGTGGATTTACTGCTTCACCGCAACCCATCTGCCCTCAGACTTATCTGGCCT
CGAGTATGACGCAGGGGTGGACACCTGCTGATGTAACAACTACAGATGCCCTCAGTCCCCATGG
TGTGGGAGCCTTAGGGCAGCCTGCCTGGAGGTGAGGAGGGAGCTCTTCATGCCTTACTCTAGCC
ACAGAGTCCTGGAAGGACCCCTCGGGCTCCAGAGCTCAGGGAATGGGTCTTTTGGTTTCATCTG
GAGCCCTTTTCTCTCTGGCAGGTGCACAGTTCCTCAGGGTCTTTGGCAAAGGTGATTACAGAGT
CAATCCACACACATTCCTCCTCCTTCCAATTCCCCTCTCTCCCTGGGTCAGGTTGACAACCTGG
CTCTTTTTCCTTTCCTTCCTAATTCTCTGCCTGGCCTCTCTTGATCACGTGACATCTGTCTCCC
ATTGACCTTCTTAATCAGGAGTGGTCAGAGCCAACGTCCACACTGGTGAAGGCTCAGGTTATTT
TTGGAGTAAGATACAGAGTTGCTGTATGATCCTTAAATGCAGCAATGTTCTCATAAGAATGGGA
TCCCGTTAAATCTTCACGTCAACTGTAGGTAACTTGTGTCAGAAACAGAGAAAAGGGGGCATCT
TCCTCCCTCCCCCTCTGCAGGCCCAGTCTCCAGCGTTACACAGGGCTTTGTGAGCACCAGCTCC
TGCCCCAGTCTGGGGATAACAACCCTCTAAACACTGACTTTGACTTGTCCCCAGTGCAGTTGGC
ACTCAGCCTCACAGACTCTCAGTGCAGCTCTGACTGCTCTCAATTATATAATTTAGGAAGGTCA
TGTGGCTTCAGCCCTGTCCCCCATTCCCCATCACCTCCCTTGAGGCATCCTGGACAAGTCCCAT
GTGCACTTGTATAGGTCTAGAAAGAATGCTTGGAGAGTTTCTGTCTCCAGGTCAAAATTCCTCA
AATTCCTGGGAAGGGCAGAGGCTTGATGCTCCAGTGTTTTCCGTGGCTGACCCTCCACATCTGG
GTCTGTGGTAAGGGAGAAGTCAAGAAAAAGGGGAAAGGAACTTGACTTTCTATAAAGGAAGGTA
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGTGTGCACATGT
GTGTGTTAGAGAGCTAGCAATCCAAGAGTCCTTCCCAGACTAGGAGGCCAATCCATGGTATGAA
GGAGTTTGTGCTCAACTGTCTATGTGGAGCAGGGTTGGGCTGAGTTTCTGTCTCCTTGCTCTAG
TTTGCCTCCACGATCTGTAGCTCAGACTCTTGGGAAAGAATGAGCTTCGGTATGGACACTTGTT
CTAGACCATAGGAGCCAACCCTCCCCCATGGCACTTGCTTGTACCTCATCTGCACTCTTGCTGT
GAGGACAGAGATTGGGCCAGATGTAACCGCCTTGTACTGCCTTGTACTCGTGTGGACTGGCGTG
TGGGTGTCGGCGTTGGGATTAGCTTGGGGAGATATTTGCCAGCTCTCGGTTTTCTTGCCCAAGT
GCAGATGCTAGAGAGCCCCTCCAAGTCCCAACTTAATTCTTGCCTCCCTGAAGACCTCAACCGT
AGAAGGTCATCATGAAAAGGCCACCACTTCAGAGTCCTGGCCTAAACTCAGAGTCCACATGCCT
TCCCAGCAGGGGCCACAGAGGTGATCCACTTGGGCCTCTTTCCCCACTCAGCCCAGATGGGTGG
GGGTGGAGGGTGGAGGGTGGAAGGAGAGGAGTTGGAGAAAATCCATGTCTATTCAGGCTCCGTC
TGGGTCTGCTGCACAACAACTTCAGCTTGTTTGAGCCCAAACTTACATAAGTTATAATCACAAA
GCTGGAACTAGAGAAAGAGAGAAGGACACACACACACACACACACACACACACACACACATACA
CACACACTCATATATACACATACACACATATACACATATATACACATACACACGCATACACACA
TACACACATATACACACATACATAACACACATACACATGCATACACACACTCATATATACACAT
ACACACATATACACATATATATACGCATACACACATACACACATATACACACATACATAACACA
CATACACATGCATACACACACACACACACACACACACACACACACACACACACACACCCTCGTC
ACTCCTCATCCCTCCTAACATTTTCTCCTTAGGAGGCTAGTAGAAGGGAAGGAAGCCGTTTCTA
TTTACAAGGAAGTCCGGCTCACGGCCCGGGAGATGACTGCCTTGCAGGCATGGGGGATAGAGTT
CGGATCCCCGTGACCCACGTGAAGGCTGGGTAGGCCTGGCAGTGGACCTCTAAATCCAAACTCA
GAAAGTGGAGACAGGAGATGCCAGAGCAAGTCAAGAGGCCATATCCATGAACTCTGGGACTGAT
GGAGAAACCCTTCCTTCCTCCAGTGAATATGATTAGAAGACATAGGCTGACTCCCAGTGTCAAA
CTCAGGGACTCCATGCACACACACCCCTGCATGCTCCTGCACATACACTTGCAAACATGAGCAC
ACACACTTCATACATCCACATGGAAATGGGGGTAAGAGAAACGAGAGAGTACCTGGCTCATGGT
TCCTCTAGGATGGGCCCACCCTGCCCAGGACTTAGAAGCCCTTTCCACACCTAGCAGGACCACA
CGATTTCTTCTGCCTGTTCTCTCTCTTGTACGTGTGAACAAACGGGATGTGTCATCCACCATGG
GGCTGTGTGCGCACTCCTAGGGCCTCTTGTGCTCTGACCTCCCTGTCCTACATGGATGCCCTCG
GCTCAAATATCACCCCAGAGATTCTTCCACGGTCACCGACTCCGTCATTCTAGTTTGTCTTCAG
GAATCATCACTCACTTGTTTAATTATTGTTTAATTCTCGCTCCAATGCTTTGCTTAATGTAAAT
CCCATGGCTGCCCCTTTGATTTCTCCTGTCTTCCCTTGTCTGGCACTAACAAGACGTCAATAAA
TTCTTGCCGACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039080854 ⟹ XP_038936782

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080855 ⟹ XP_038936783

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080856 ⟹ XP_038936784

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080857 ⟹ XP_038936785

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,174 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,543 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080858 ⟹ XP_038936786

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080859 ⟹ XP_038936787

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,147 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,517 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080860 ⟹ XP_038936788

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,117 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,504 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080861 ⟹ XP_038936789

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,174 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,544 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080862 ⟹ XP_038936790

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,137 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,513 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_039080863 ⟹ XP_038936791

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,162 - 128,777,238 (+)	NCBI
mRatBN7.2	8	119,869,533 - 119,899,605 (+)	NCBI

RefSeq Acc Id:

XM_063264939 ⟹ XP_063121009

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,148 - 128,777,238 (+)	NCBI

RefSeq Acc Id:

XM_063264940 ⟹ XP_063121010

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,747,174 - 128,777,238 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001376201	(Get FASTA)	NCBI Sequence Viewer
	NP_001376202	(Get FASTA)	NCBI Sequence Viewer
	NP_036852	(Get FASTA)	NCBI Sequence Viewer
	XP_038936782	(Get FASTA)	NCBI Sequence Viewer
	XP_038936783	(Get FASTA)	NCBI Sequence Viewer
	XP_038936784	(Get FASTA)	NCBI Sequence Viewer
	XP_038936785	(Get FASTA)	NCBI Sequence Viewer
	XP_038936786	(Get FASTA)	NCBI Sequence Viewer
	XP_038936787	(Get FASTA)	NCBI Sequence Viewer
	XP_038936788	(Get FASTA)	NCBI Sequence Viewer
	XP_038936789	(Get FASTA)	NCBI Sequence Viewer
	XP_038936790	(Get FASTA)	NCBI Sequence Viewer
	XP_038936791	(Get FASTA)	NCBI Sequence Viewer
	XP_063121009	(Get FASTA)	NCBI Sequence Viewer
	XP_063121010	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD44968	(Get FASTA)	NCBI Sequence Viewer
	AAH87694	(Get FASTA)	NCBI Sequence Viewer
	AAI61856	(Get FASTA)	NCBI Sequence Viewer
	BAA05657	(Get FASTA)	NCBI Sequence Viewer
	BAA05658	(Get FASTA)	NCBI Sequence Viewer
	CAA61151	(Get FASTA)	NCBI Sequence Viewer
	CAA61795	(Get FASTA)	NCBI Sequence Viewer
	CAA61796	(Get FASTA)	NCBI Sequence Viewer
	CAA62039	(Get FASTA)	NCBI Sequence Viewer
	EDL76871	(Get FASTA)	NCBI Sequence Viewer
	EDL76873	(Get FASTA)	NCBI Sequence Viewer
	EDL76876	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000025279.3
	ENSRNOP00000025344.5
	ENSRNOP00000080049.1
	ENSRNOP00000105313
	ENSRNOP00000112149
GenBank Protein	Q63327	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_036852 ⟸ NM_012720
- Peptide Label:	isoform 1
- UniProtKB:	A6I401 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSQKVAKEGPRLSKNQKFSEHFSIHCCPPFTFLNSKREIVDRKYSICKSGCFYQKKEEDWICCA CQKTRLRRRSRSTPRKK hide sequence

Ensembl Acc Id:

ENSRNOP00000025279 ⟸ ENSRNOT00000025279

Ensembl Acc Id:

ENSRNOP00000025344 ⟸ ENSRNOT00000025343

RefSeq Acc Id:	XP_038936786 ⟸ XM_039080858
- Peptide Label:	isoform X1
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936782 ⟸ XM_039080854
- Peptide Label:	isoform X1
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936783 ⟸ XM_039080855
- Peptide Label:	isoform X1
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936784 ⟸ XM_039080856
- Peptide Label:	isoform X1
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936788 ⟸ XM_039080860
- Peptide Label:	isoform X2
- UniProtKB:	A6I402 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936790 ⟸ XM_039080862
- Peptide Label:	isoform X3
- UniProtKB:	A6I401 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936787 ⟸ XM_039080859
- Peptide Label:	isoform X1
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936791 ⟸ XM_039080863
- Peptide Label:	isoform X3
- UniProtKB:	A6I401 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936785 ⟸ XM_039080857
- Peptide Label:	isoform X1
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936789 ⟸ XM_039080861
- Peptide Label:	isoform X2
- UniProtKB:	A6I402 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001376201 ⟸ NM_001389272
- Peptide Label:	isoform 2
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001376202 ⟸ NM_001389273
- Peptide Label:	isoform 2
- UniProtKB:	Q64266 (UniProtKB/Swiss-Prot), Q63519 (UniProtKB/Swiss-Prot), Q63343 (UniProtKB/Swiss-Prot), Q63328 (UniProtKB/Swiss-Prot), Q63327 (UniProtKB/Swiss-Prot), Q9QZV5 (UniProtKB/Swiss-Prot), B1WBR5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000080049 ⟸ ENSRNOT00000104512

RefSeq Acc Id:	XP_063121009 ⟸ XM_063264939
- Peptide Label:	isoform X2
- UniProtKB:	A6I402 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121010 ⟸ XM_063264940
- Peptide Label:	isoform X3
- UniProtKB:	A6I401 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000105313 ⟸ ENSRNOT00000148240

Ensembl Acc Id:

ENSRNOP00000112149 ⟸ ENSRNOT00000130926

Protein Domains

FYVE-type zinc finger

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q63327-F1-model_v2	AlphaFold	Q63327	1-170	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696384

Promoter ID:

EPDNEW_R6907

Type:

multiple initiation site

Name:

Mobp_1

Description:

myelin-associated oligodendrocyte basic protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	128,824,482 - 128,824,542	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3101	AgrOrtholog
BioCyc Gene	G2FUF-28751	BioCyc
Ensembl Genes	ENSRNOG00000018700	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000025279.6	UniProtKB/Swiss-Prot
	ENSRNOT00000025343.9	UniProtKB/Swiss-Prot
	ENSRNOT00000104512.1	UniProtKB/Swiss-Prot
	ENSRNOT00000130926	ENTREZGENE
	ENSRNOT00000148240	ENTREZGENE
IMAGE_CLONE	IMAGE:7320248	IMAGE-MGC_LOAD
InterPro	FYVE_2	UniProtKB/Swiss-Prot
	Intracell_Transport_Effector	UniProtKB/Swiss-Prot
KEGG Report	rno:25037	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:187383	IMAGE-MGC_LOAD
NCBI Gene	25037	ENTREZGENE
PANTHER	MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED	UniProtKB/Swiss-Prot
	RAB EFFECTOR MYRIP	UniProtKB/Swiss-Prot
Pfam	FYVE_2	UniProtKB/Swiss-Prot
PhenoGen	Mobp	PhenoGen
RatGTEx	ENSRNOG00000018700	RatGTEx
TIGR	TC208077
UniProt	A6I401	ENTREZGENE, UniProtKB/TrEMBL
	A6I402	ENTREZGENE, UniProtKB/TrEMBL
	B1WBR5	ENTREZGENE, UniProtKB/TrEMBL
	MOBP_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q63328	ENTREZGENE
	Q63343	ENTREZGENE
	Q63519	ENTREZGENE
	Q64266	ENTREZGENE
	Q9QZV5	ENTREZGENE
UniProt Secondary	Q63328	UniProtKB/Swiss-Prot
	Q63343	UniProtKB/Swiss-Prot
	Q63519	UniProtKB/Swiss-Prot
	Q64266	UniProtKB/Swiss-Prot
	Q9QZV5	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-25	Mobp	myelin-associated oligodendrocyte basic protein	Mobp	myelin-associated oligodendrocytic basic protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-11-06	Mobp	myelin-associated oligodendrocytic basic protein	Mobp81	Myelin-associated/Oligodendrocytic Basic Protein-81	Symbol and Name updated	625702	APPROVED
2002-06-10	Mobp81	Myelin-associated/Oligodendrocytic Basic Protein-81			Symbol and Name status set to approved	70586	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	mRNA expression restricted to the CNS myelin	633191
gene_product	member of the central nervous system (CNS) myelin-constituting protein family	633191
gene_product	member of the central nervous system (CNS) myelin-constituting proteins	633191

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD