Tspan7 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | X | 14,881,327 - 14,978,627 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | X | 14,881,334 - 14,978,655 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | X | 12,208,783 - 12,306,092 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 12,208,783 - 12,306,131 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | X | 12,393,035 - 12,490,273 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 15,889,994 - 15,987,224 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 12,146,537 - 12,243,766 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 13,261,551 - 13,282,886 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 13,261,558 - 13,279,099 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | X | 14,051,176 - 14,071,673 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | X | 24,362,332 - 24,383,176 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | X | 12,822,161 - 12,919,359 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q12 | NCBI | | | | |
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TSPAN7 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | X | 38,561,542 - 38,688,918 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 38,561,498 - 38,689,249 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | X | 38,420,795 - 38,548,172 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 38,305,683 - 38,433,116 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 38,176,955 - 38,304,388 | NCBI | | | | | Celera | X | 42,558,371 - 42,685,804 (+) | NCBI | | Celera | | | Cytogenetic Map | X | p11.4 | NCBI | | | | | HuRef | X | 36,165,283 - 36,292,541 (+) | NCBI | | HuRef | | | CHM1_1 | X | 38,451,822 - 38,579,246 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 37,965,162 - 38,092,516 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tspan7 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | X | 10,351,355 - 10,462,843 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 10,351,397 - 10,462,844 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | X | 10,485,116 - 10,596,604 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 10,485,158 - 10,596,605 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | X | 10,062,242 - 10,173,730 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 9,642,075 - 9,753,563 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 8,190,531 - 8,300,146 (+) | NCBI | | Celera | | | Cytogenetic Map | X | A1.1 | NCBI | | | | | cM Map | X | 4.85 | NCBI | | | | |
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Tspan7 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955566 | 75,576 - 206,827 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955566 | 75,576 - 203,512 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TSPAN7 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | X | 40,204,812 - 40,332,367 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 40,208,172 - 40,335,748 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 31,006,297 - 31,133,856 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 38,818,523 - 38,841,328 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 38,714,162 - 38,841,328 (+) | Ensembl | | | panPan2 | panpan1.1 |
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TSPAN7 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | X | 33,336,821 - 33,465,097 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 33,336,846 - 33,464,163 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 20,686,033 - 20,814,156 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 33,386,892 - 33,515,069 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 33,386,871 - 33,515,066 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | X | 33,465,894 - 33,593,915 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 33,437,798 - 33,565,917 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 33,479,723 - 33,608,321 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Tspan7 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | X | 25,575,743 - 25,698,159 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936502 | 5,416,454 - 5,538,905 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936502 | 5,416,454 - 5,538,870 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TSPAN7 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | X | 34,522,933 - 34,660,212 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 34,522,899 - 34,660,216 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 38,595,834 - 38,624,148 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TSPAN7 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | X | 35,711,603 - 35,829,385 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 35,711,601 - 35,829,681 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666076 | 896,882 - 1,015,532 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tspan7 (Heterocephalus glaber - naked mole-rat) |
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Tspan7 (Rattus rattus - black rat) |
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