Map4 (microtubule-associated protein 4) - Rat Genome Database

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Gene: Map4 (microtubule-associated protein 4) Rattus norvegicus
Analyze
Symbol: Map4
Name: microtubule-associated protein 4
RGD ID: 1564359
Description: Predicted to enable microtubule binding activity and microtubule stabilizing activity. Predicted to be involved in microtubule polymerization; negative regulation of non-motile cilium assembly; and plasma membrane bounded cell projection organization. Predicted to act upstream of or within cell division; microtubule cytoskeleton organization; and microtubule sliding. Located in axon. Orthologous to human MAP4 (microtubule associated protein 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC367171; MAP-4; Mtap4
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,800,393 - 118,942,805 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8118,804,022 - 118,942,805 (+)EnsemblGRCr8
mRatBN7.28109,925,233 - 110,064,370 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,925,575 - 110,064,362 (+)EnsemblmRatBN7.2
Rnor_6.08118,013,584 - 118,159,934 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8118,013,612 - 118,159,933 (+)Ensemblrn6Rnor6.0
Rnor_5.08117,366,074 - 117,515,388 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48114,300,908 - 114,438,008 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8109,215,219 - 109,352,108 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dimethoxyphenol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aldrin  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzatropine  (ISO)
benzene  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
Brodifacoum  (EXP)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlordecone  (ISO)
chlormequat chloride  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumarin  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dihydroartemisinin  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
furfural  (ISO)
genistein  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
menadione  (ISO)
mercury dibromide  (ISO)
methamphetamine  (ISO)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N-nitrosodiethylamine  (ISO)
Nivalenol  (ISO)
oxaliplatin  (EXP)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
phosphorus atom  (ISO)
phosphorus(.)  (ISO)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
pyrogallol  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
spermine  (ISO)
sulfadimethoxine  (EXP)
tamoxifen  (ISO)
tert-butyl hydroperoxide  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
torcetrapib  (ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. MAP2 Defines a Pre-axonal Filtering Zone to Regulate KIF1- versus KIF5-Dependent Cargo Transport in Sensory Neurons. Gumy LF, etal., Neuron. 2017 Apr 19;94(2):347-362.e7. doi: 10.1016/j.neuron.2017.03.046.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:10542369   PMID:17101137   PMID:17114649   PMID:21822276   PMID:22164227   PMID:22658674   PMID:22681889   PMID:23376485   PMID:23572511   PMID:25232678   PMID:29476059   PMID:30053369  


Genomics

Comparative Map Data
Map4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,800,393 - 118,942,805 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8118,804,022 - 118,942,805 (+)EnsemblGRCr8
mRatBN7.28109,925,233 - 110,064,370 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,925,575 - 110,064,362 (+)EnsemblmRatBN7.2
Rnor_6.08118,013,584 - 118,159,934 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8118,013,612 - 118,159,933 (+)Ensemblrn6Rnor6.0
Rnor_5.08117,366,074 - 117,515,388 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48114,300,908 - 114,438,008 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8109,215,219 - 109,352,108 (+)NCBICelera
Cytogenetic Map8q32NCBI
MAP4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38347,850,695 - 48,088,848 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl347,850,678 - 48,089,295 (-)Ensemblhg38GRCh38
GRCh37347,892,185 - 48,130,338 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36347,867,189 - 48,105,715 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34347,989,573 - 48,105,714NCBI
Celera347,842,039 - 48,079,819 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef347,947,535 - 48,185,502 (-)NCBIHuRef
CHM1_1347,843,426 - 48,082,709 (-)NCBICHM1_1
T2T-CHM13v2.0347,878,026 - 48,116,148 (-)NCBIT2T-CHM13v2.0
Map4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399109,758,909 - 109,913,018 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9109,760,528 - 109,913,023 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389109,929,841 - 110,083,954 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9109,931,460 - 110,083,955 (+)Ensemblmm10GRCm38
MGSCv379109,834,278 - 109,986,451 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369109,776,634 - 109,929,123 (+)NCBIMGSCv36mm8
Celera9109,659,367 - 109,812,146 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.83NCBI
Map4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542024,437,492 - 24,455,207 (+)Ensembl
ChiLan1.0NW_00495542024,437,492 - 24,537,410 (+)NCBIChiLan1.0ChiLan1.0
MAP4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2247,819,173 - 48,048,378 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1347,823,941 - 48,053,146 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0347,763,379 - 47,995,457 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1348,858,544 - 49,084,639 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl348,858,544 - 49,020,950 (-)EnsemblpanPan2panpan1.1
MAP4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,896,920 - 41,101,626 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,896,772 - 41,100,001 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2040,814,029 - 41,018,606 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02041,382,542 - 41,585,188 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2041,382,542 - 41,585,185 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12040,622,626 - 40,827,269 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02041,023,665 - 41,228,690 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02041,304,251 - 41,508,363 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Map4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118201,906,566 - 201,996,886 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365961,455,705 - 1,546,007 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1330,633,054 - 30,804,761 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11330,633,049 - 30,805,183 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21333,909,389 - 34,078,909 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1229,239,983 - 9,461,438 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl229,242,309 - 9,394,713 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041157,644,131 - 157,867,070 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473073,490,974 - 73,656,097 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Map4
1227 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:495
Count of miRNA genes:254
Interacting mature miRNAs:335
Transcripts:ENSRNOT00000056166
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)849849908118871671Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)868690349119799881Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)898145073122898010Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat

Markers in Region
D8Rat10  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr88118,871,671 - 118,871,856 (+)Marker Load Pipeline
Rnor_6.08118,087,517 - 118,087,701NCBIRnor6.0
Rnor_5.08117,431,943 - 117,432,127UniSTSRnor5.0
Celera8109,281,056 - 109,281,240UniSTS
RH 3.4 Map81113.69RGD
RH 3.4 Map81113.69UniSTS
SHRSP x BN Map871.8999RGD
SHRSP x BN Map871.8999UniSTS
Cytogenetic Map8q32UniSTS
RH129898  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,996,887 - 109,997,101 (+)MAPPERmRatBN7.2
Rnor_6.08118,091,152 - 118,091,365NCBIRnor6.0
Rnor_5.08117,435,578 - 117,435,791UniSTSRnor5.0
Celera8109,284,691 - 109,284,904UniSTS
RH 3.4 Map81113.39UniSTS
Cytogenetic Map8q32UniSTS
RH134553  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28110,063,309 - 110,063,505 (+)MAPPERmRatBN7.2
Rnor_6.08118,158,874 - 118,159,069NCBIRnor6.0
Rnor_5.08117,514,328 - 117,514,523UniSTSRnor5.0
RGSC_v3.48114,436,948 - 114,437,143UniSTSRGSC3.4
Celera8109,351,048 - 109,351,243UniSTS
Cytogenetic Map8q32UniSTS
RH144399  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28110,036,844 - 110,037,091 (+)MAPPERmRatBN7.2
Rnor_6.08118,132,409 - 118,132,655NCBIRnor6.0
Rnor_5.08117,487,508 - 117,487,754UniSTSRnor5.0
Rnor_5.08117,476,567 - 117,476,813UniSTSRnor5.0
RGSC_v3.48114,410,389 - 114,410,635UniSTSRGSC3.4
Celera8109,324,646 - 109,324,892UniSTS
RH 3.4 Map81113.99UniSTS
Cytogenetic Map8q32UniSTS
AW521311  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,996,843 - 109,996,973 (+)MAPPERmRatBN7.2
Rnor_6.08118,091,108 - 118,091,237NCBIRnor6.0
Rnor_5.08117,435,534 - 117,435,663UniSTSRnor5.0
Celera8109,284,647 - 109,284,776UniSTS
RH 3.4 Map81113.99UniSTS
Cytogenetic Map8q32UniSTS
PMC317076P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,925,102 - 109,925,609 (+)MAPPERmRatBN7.2
Rnor_6.08118,013,095 - 118,013,601NCBIRnor6.0
Rnor_5.08117,365,562 - 117,366,068UniSTSRnor5.0
RGSC_v3.48114,300,391 - 114,300,897UniSTSRGSC3.4
Celera8109,214,702 - 109,215,208UniSTS
Cytogenetic Map8q32UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001024278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB175782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB175783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC128747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC088405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000056161   ⟹   ENSRNOP00000069786
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,070 - 118,942,804 (+)Ensembl
mRatBN7.2 Ensembl8109,973,868 - 110,062,787 (+)Ensembl
Rnor_6.0 Ensembl8118,066,988 - 118,158,032 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000056166   ⟹   ENSRNOP00000053011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,022 - 118,941,848 (+)Ensembl
mRatBN7.2 Ensembl8109,925,575 - 110,063,619 (+)Ensembl
Rnor_6.0 Ensembl8118,013,612 - 118,159,933 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097713   ⟹   ENSRNOP00000091971
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,022 - 118,940,473 (+)Ensembl
mRatBN7.2 Ensembl8109,925,575 - 110,062,059 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098378   ⟹   ENSRNOP00000095245
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,066 - 118,942,805 (+)Ensembl
mRatBN7.2 Ensembl8110,034,419 - 110,064,362 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099144   ⟹   ENSRNOP00000081853
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,022 - 118,940,473 (+)Ensembl
mRatBN7.2 Ensembl8109,973,868 - 110,062,787 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105433   ⟹   ENSRNOP00000080376
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,042 - 118,940,473 (+)Ensembl
mRatBN7.2 Ensembl8109,973,868 - 110,062,787 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109752   ⟹   ENSRNOP00000095817
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,022 - 118,942,805 (+)Ensembl
mRatBN7.2 Ensembl8109,973,921 - 110,063,620 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110699   ⟹   ENSRNOP00000096077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,804,022 - 118,940,494 (+)Ensembl
mRatBN7.2 Ensembl8109,925,575 - 110,062,059 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117109   ⟹   ENSRNOP00000081325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8118,913,420 - 118,942,801 (+)Ensembl
mRatBN7.2 Ensembl8110,034,419 - 110,064,362 (+)Ensembl
RefSeq Acc Id: NM_001024278   ⟹   NP_001019449
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,804,066 - 118,942,805 (+)NCBI
mRatBN7.28109,925,610 - 110,064,370 (+)NCBI
RefSeq Acc Id: NM_001419953   ⟹   NP_001406882
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,804,066 - 118,942,805 (+)NCBI
mRatBN7.28109,925,610 - 110,064,370 (+)NCBI
RefSeq Acc Id: NM_001419954   ⟹   NP_001406883
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,804,066 - 118,942,805 (+)NCBI
mRatBN7.28109,925,610 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_006243813   ⟹   XP_006243875
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243814   ⟹   XP_006243876
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,237 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243815   ⟹   XP_006243877
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243816   ⟹   XP_006243878
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,237 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243818   ⟹   XP_006243880
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
Rnor_6.08118,013,585 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243819   ⟹   XP_006243881
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
Rnor_6.08118,013,585 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243820   ⟹   XP_006243882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,234 - 110,064,370 (+)NCBI
Rnor_6.08118,013,584 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243821   ⟹   XP_006243883
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,251 - 110,064,370 (+)NCBI
Rnor_6.08118,013,601 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243823   ⟹   XP_006243885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,252 - 110,064,370 (+)NCBI
Rnor_6.08118,013,601 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595795   ⟹   XP_017451284
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595796   ⟹   XP_017451285
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,942 - 118,942,805 (+)NCBI
mRatBN7.28110,028,899 - 110,064,370 (+)NCBI
Rnor_6.08118,128,727 - 118,159,931 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595797   ⟹   XP_017451286
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,941 - 118,942,805 (+)NCBI
mRatBN7.28110,028,898 - 110,064,370 (+)NCBI
Rnor_6.08118,128,726 - 118,159,931 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039082631   ⟹   XP_038938559
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082632   ⟹   XP_038938560
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082633   ⟹   XP_038938561
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082634   ⟹   XP_038938562
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,233 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082635   ⟹   XP_038938563
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,234 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082636   ⟹   XP_038938564
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,234 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082639   ⟹   XP_038938567
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,249 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082640   ⟹   XP_038938568
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,937 - 118,942,805 (+)NCBI
mRatBN7.28110,028,897 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082641   ⟹   XP_038938569
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,920 - 118,942,805 (+)NCBI
mRatBN7.28110,028,887 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_063265908   ⟹   XP_063121978
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265909   ⟹   XP_063121979
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265910   ⟹   XP_063121980
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265911   ⟹   XP_063121981
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265912   ⟹   XP_063121982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265914   ⟹   XP_063121984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265915   ⟹   XP_063121985
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265916   ⟹   XP_063121986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265917   ⟹   XP_063121987
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265918   ⟹   XP_063121988
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265920   ⟹   XP_063121990
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265921   ⟹   XP_063121991
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265922   ⟹   XP_063121992
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265923   ⟹   XP_063121993
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265924   ⟹   XP_063121994
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,946 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265925   ⟹   XP_063121995
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,947 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265926   ⟹   XP_063121996
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,943 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265928   ⟹   XP_063121998
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,942 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265929   ⟹   XP_063121999
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,929 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265930   ⟹   XP_063122000
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,921 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265931   ⟹   XP_063122001
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,930 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265932   ⟹   XP_063122002
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,913 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265933   ⟹   XP_063122003
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,924 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265934   ⟹   XP_063122004
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,925 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265935   ⟹   XP_063122005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,911 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265937   ⟹   XP_063122007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,912 - 118,942,805 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001019449 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406882 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406883 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243875 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243876 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243877 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243878 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243880 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243881 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243882 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243883 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243885 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451284 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451285 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451286 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938559 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938560 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938561 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938562 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938563 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938564 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938568 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938569 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121978 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121979 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121980 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121981 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121982 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121984 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121985 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121986 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121987 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121988 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121990 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121991 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121992 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121993 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121994 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121995 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121996 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121998 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121999 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122000 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122001 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122002 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122003 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122004 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122005 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122007 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH88405 (Get FASTA)   NCBI Sequence Viewer  
  BAD14292 (Get FASTA)   NCBI Sequence Viewer  
  BAD14293 (Get FASTA)   NCBI Sequence Viewer  
  EDL77097 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000053011
  ENSRNOP00000069786
  ENSRNOP00000080376
  ENSRNOP00000081325
  ENSRNOP00000081853
  ENSRNOP00000095245
  ENSRNOP00000095817
  ENSRNOP00000096077
GenBank Protein Q5M7W5 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_006243875   ⟸   XM_006243813
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243877   ⟸   XM_006243815
- Peptide Label: isoform X3
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243876   ⟸   XM_006243814
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243878   ⟸   XM_006243816
- Peptide Label: isoform X4
- UniProtKB: A0A0G2JW88 (UniProtKB/TrEMBL),   A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243880   ⟸   XM_006243818
- Peptide Label: isoform X6
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243881   ⟸   XM_006243819
- Peptide Label: isoform X10
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243882   ⟸   XM_006243820
- Peptide Label: isoform X14
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243883   ⟸   XM_006243821
- Peptide Label: isoform X22
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243885   ⟸   XM_006243823
- Peptide Label: isoform X24
- UniProtKB: A0A8I6AEN3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451284   ⟸   XM_017595795
- Peptide Label: isoform X5
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451286   ⟸   XM_017595797
- Peptide Label: isoform X37
- Sequence:
RefSeq Acc Id: XP_017451285   ⟸   XM_017595796
- Peptide Label: isoform X35
- Sequence:
Ensembl Acc Id: ENSRNOP00000053011   ⟸   ENSRNOT00000056166
Ensembl Acc Id: ENSRNOP00000069786   ⟸   ENSRNOT00000056161
RefSeq Acc Id: XP_038938562   ⟸   XM_039082634
- Peptide Label: isoform X17
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938563   ⟸   XM_039082635
- Peptide Label: isoform X18
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938564   ⟸   XM_039082636
- Peptide Label: isoform X21
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938561   ⟸   XM_039082633
- Peptide Label: isoform X15
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938559   ⟸   XM_039082631
- Peptide Label: isoform X8
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938560   ⟸   XM_039082632
- Peptide Label: isoform X11
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938567   ⟸   XM_039082639
- Peptide Label: isoform X28
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938569   ⟸   XM_039082641
- Peptide Label: isoform X39
RefSeq Acc Id: XP_038938568   ⟸   XM_039082640
- Peptide Label: isoform X32
Ensembl Acc Id: ENSRNOP00000081325   ⟸   ENSRNOT00000117109
Ensembl Acc Id: ENSRNOP00000081853   ⟸   ENSRNOT00000099144
Ensembl Acc Id: ENSRNOP00000095245   ⟸   ENSRNOT00000098378
Ensembl Acc Id: ENSRNOP00000095817   ⟸   ENSRNOT00000109752
Ensembl Acc Id: ENSRNOP00000080376   ⟸   ENSRNOT00000105433
Ensembl Acc Id: ENSRNOP00000096077   ⟸   ENSRNOT00000110699
Ensembl Acc Id: ENSRNOP00000091971   ⟸   ENSRNOT00000097713
RefSeq Acc Id: NP_001406883   ⟸   NM_001419954
- Peptide Label: isoform 1
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL),   A0A8L2QPR2 (UniProtKB/TrEMBL),   A6I3D0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001406882   ⟸   NM_001419953
- Peptide Label: isoform 2
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001019449   ⟸   NM_001024278
- Peptide Label: isoform 3
- UniProtKB: Q75NR5 (UniProtKB/Swiss-Prot),   Q75NR6 (UniProtKB/Swiss-Prot),   Q5M7W5 (UniProtKB/Swiss-Prot),   A0A8I6AEN3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_063121978   ⟸   XM_063265908
- Peptide Label: isoform X7
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121979   ⟸   XM_063265909
- Peptide Label: isoform X9
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL),   A0A8I5ZTS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121980   ⟸   XM_063265910
- Peptide Label: isoform X12
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121981   ⟸   XM_063265911
- Peptide Label: isoform X13
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL),   A0A8I5ZSY4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121982   ⟸   XM_063265912
- Peptide Label: isoform X16
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121984   ⟸   XM_063265914
- Peptide Label: isoform X19
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121985   ⟸   XM_063265915
- Peptide Label: isoform X20
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121986   ⟸   XM_063265916
- Peptide Label: isoform X23
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121987   ⟸   XM_063265917
- Peptide Label: isoform X25
- UniProtKB: A0A8I6AEN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121988   ⟸   XM_063265918
- Peptide Label: isoform X26
- UniProtKB: A0A8I6AEN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121990   ⟸   XM_063265920
- Peptide Label: isoform X27
- UniProtKB: A0A8I6AEN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121991   ⟸   XM_063265921
- Peptide Label: isoform X29
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121992   ⟸   XM_063265922
- Peptide Label: isoform X30
- UniProtKB: A0A8I6AKJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121993   ⟸   XM_063265923
- Peptide Label: isoform X31
- UniProtKB: A0A8I6AEN3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122005   ⟸   XM_063265935
- Peptide Label: isoform X46
RefSeq Acc Id: XP_063122007   ⟸   XM_063265937
- Peptide Label: isoform X47
RefSeq Acc Id: XP_063122002   ⟸   XM_063265932
- Peptide Label: isoform X43
RefSeq Acc Id: XP_063122000   ⟸   XM_063265930
- Peptide Label: isoform X41
RefSeq Acc Id: XP_063122003   ⟸   XM_063265933
- Peptide Label: isoform X44
RefSeq Acc Id: XP_063122004   ⟸   XM_063265934
- Peptide Label: isoform X45
RefSeq Acc Id: XP_063121999   ⟸   XM_063265929
- Peptide Label: isoform X40
RefSeq Acc Id: XP_063122001   ⟸   XM_063265931
- Peptide Label: isoform X42
- UniProtKB: A0A8I5ZRQ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121998   ⟸   XM_063265928
- Peptide Label: isoform X38
RefSeq Acc Id: XP_063121996   ⟸   XM_063265926
- Peptide Label: isoform X36
- UniProtKB: A0A8I6AL32 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121994   ⟸   XM_063265924
- Peptide Label: isoform X33
RefSeq Acc Id: XP_063121995   ⟸   XM_063265925
- Peptide Label: isoform X34

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5M7W5-F1-model_v2 AlphaFold Q5M7W5 1-1057 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696325
Promoter ID:EPDNEW_R6849
Type:initiation region
Name:Map4_1
Description:microtubule-associated protein 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08118,013,602 - 118,013,662EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564359 AgrOrtholog
BioCyc Gene G2FUF-29083 BioCyc
Ensembl Genes ENSRNOG00000020748 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000056161 ENTREZGENE
  ENSRNOT00000056166 ENTREZGENE
  ENSRNOT00000098378 ENTREZGENE
  ENSRNOT00000099144 ENTREZGENE
  ENSRNOT00000105433 ENTREZGENE
  ENSRNOT00000109752 ENTREZGENE
  ENSRNOT00000110699 ENTREZGENE
  ENSRNOT00000117109 ENTREZGENE
IMAGE_CLONE IMAGE:7110394 IMAGE-MGC_LOAD
InterPro MAP2/MAP4/Tau UniProtKB/Swiss-Prot
  MAP_tubulin-bd_rpt UniProtKB/Swiss-Prot
KEGG Report rno:367171 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93812 IMAGE-MGC_LOAD
NCBI Gene 367171 ENTREZGENE
PANTHER MICROTUBULE-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot
  PTHR11501:SF16 UniProtKB/Swiss-Prot
Pfam Tubulin-binding UniProtKB/Swiss-Prot
PhenoGen Map4 PhenoGen
PROSITE TAU_MAP_1 UniProtKB/Swiss-Prot
  TAU_MAP_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000020748 RatGTEx
UniProt A0A0G2JW88 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZRQ1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZSY4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZTS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AEN3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AKJ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AL32 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ART8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2QPR2 ENTREZGENE, UniProtKB/TrEMBL
  A6I3D0 ENTREZGENE, UniProtKB/TrEMBL
  MAP4_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q75NR5 ENTREZGENE
  Q75NR6 ENTREZGENE
UniProt Secondary Q75NR5 UniProtKB/Swiss-Prot
  Q75NR6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-08-29 Map4  microtubule-associated protein 4  Mtap4  microtubule-associated protein 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Mtap4  microtubule-associated protein 4  LOC367171  microtubule-associated protein 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 LOC367171  microtubule-associated protein 4      Symbol and Name status set to provisional 70820 PROVISIONAL