Sun1 (Sad1 and UNC84 domain containing 1) - Rat Genome Database

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Pathways
Gene: Sun1 (Sad1 and UNC84 domain containing 1) Rattus norvegicus
Analyze
Symbol: Sun1
Name: Sad1 and UNC84 domain containing 1
RGD ID: 1359142
Description: Predicted to enable cytoskeleton-nuclear membrane anchor activity; identical protein binding activity; and lamin binding activity. Involved in ossification and response to mechanical stimulus. Predicted to be located in chromosome, telomeric region; cytoplasm; and nuclear inner membrane. Predicted to be part of meiotic nuclear membrane microtubule tethering complex. Predicted to be active in nuclear envelope. Orthologous to human SUN1 (Sad1 and UNC84 domain containing 1); INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; amitrole.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: MGC94535; SUN domain-containing protein 1; unc-84 homolog A; unc-84 homolog A (C. elegans); Unc84a
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81220,510,230 - 20,555,123 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1220,490,861 - 20,555,240 (-)EnsemblGRCr8
mRatBN7.21215,396,378 - 15,441,277 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1215,396,381 - 15,441,571 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1216,207,691 - 16,240,536 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,831,435 - 16,864,280 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01215,857,554 - 15,890,530 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01217,488,482 - 17,533,334 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1217,488,487 - 17,522,534 (-)Ensemblrn6Rnor6.0
Rnor_5.01219,475,063 - 19,519,890 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41215,899,105 - 15,931,964 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1217,151,721 - 17,184,580 (-)NCBICelera
RGSC_v3.11215,929,033 - 15,961,892 (-)NCBI
Cytogenetic Map12q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Identification and characterization of cDNAs encoding four novel proteins that interact with translin associated factor-X. Bray JD, etal., Genomics 2002 Jun;79(6):799-808.
2. Accumulation of the inner nuclear envelope protein Sun1 is pathogenic in progeric and dystrophic laminopathies. Chen CY, etal., Cell. 2012 Apr 27;149(3):565-77. doi: 10.1016/j.cell.2012.01.059.
3. Lacunocanalicular fluid flow transduces mechanical tension stress during distraction osteogenesis. Davidson EH, etal., J Craniofac Surg. 2013 Sep;24(5):1558-64. doi: 10.1097/SCS.0b013e31828f2060.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. The inner nuclear membrane protein Sun1 mediates the anchorage of Nesprin-2 to the nuclear envelope. Padmakumar VC, etal., J Cell Sci 2005 Aug 1;118(Pt 15):3419-30.
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:16380439   PMID:18396275   PMID:19874786   PMID:19933576   PMID:20711465   PMID:21610090   PMID:24062341   PMID:24586178   PMID:24589552   PMID:31505169   PMID:34205257  


Genomics

Comparative Map Data
Sun1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81220,510,230 - 20,555,123 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1220,490,861 - 20,555,240 (-)EnsemblGRCr8
mRatBN7.21215,396,378 - 15,441,277 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1215,396,381 - 15,441,571 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1216,207,691 - 16,240,536 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,831,435 - 16,864,280 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01215,857,554 - 15,890,530 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01217,488,482 - 17,533,334 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1217,488,487 - 17,522,534 (-)Ensemblrn6Rnor6.0
Rnor_5.01219,475,063 - 19,519,890 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41215,899,105 - 15,931,964 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1217,151,721 - 17,184,580 (-)NCBICelera
RGSC_v3.11215,929,033 - 15,961,892 (-)NCBI
Cytogenetic Map12q11NCBI
SUN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387815,557 - 874,934 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7816,591 - 896,435 (+)Ensemblhg38GRCh38
GRCh377855,194 - 914,571 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367822,778 - 881,083 (+)NCBIBuild 36Build 36hg18NCBI36
Build 347629,534 - 687,780NCBI
Celera7824,287 - 883,943 (+)NCBICelera
Cytogenetic Map7p22.3NCBI
HuRef7773,688 - 833,223 (+)NCBIHuRef
CHM1_17854,773 - 914,152 (+)NCBICHM1_1
T2T-CHM13v2.07918,630 - 978,053 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27909,796 - 969,506 (+)NCBI
Sun1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395139,186,313 - 139,235,594 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5139,186,392 - 139,235,595 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm385139,200,564 - 139,249,839 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5139,200,637 - 139,249,840 (+)Ensemblmm10GRCm38
MGSCv375139,676,624 - 139,725,749 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv365139,454,312 - 139,503,437 (+)NCBIMGSCv36mm8
Celera5136,254,811 - 136,303,887 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map578.12NCBI
Sun1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554608,579,460 - 8,617,705 (+)Ensembl
ChiLan1.0NW_0049554608,560,824 - 8,619,142 (+)NCBIChiLan1.0ChiLan1.0
SUN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v265,756,509 - 5,817,989 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1754,081,199 - 54,142,678 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07971,632 - 1,031,152 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.171,204,971 - 1,247,389 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl71,190,462 - 1,247,390 (+)EnsemblpanPan2panpan1.1
SUN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1615,996,061 - 16,047,788 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl615,997,488 - 16,047,687 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha617,468,155 - 17,519,774 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0616,125,803 - 16,177,344 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl616,125,765 - 16,178,587 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1615,928,651 - 15,980,115 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0615,855,004 - 15,906,629 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0616,144,345 - 16,195,693 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Sun1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344143,898,786 - 143,942,546 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367541,067,854 - 1,110,305 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367541,067,900 - 1,111,568 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SUN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3486,021 - 530,869 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.13485,980 - 532,974 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23334,443 - 367,468 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SUN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12820,701,445 - 20,762,979 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2820,700,963 - 20,742,915 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666090928,854 - 985,629 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sun1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474026,410,853 - 26,462,513 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474026,361,340 - 26,463,869 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Sun1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11613,950,912 - 13,995,560 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Sun1
282 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:71
Count of miRNA genes:61
Interacting mature miRNAs:63
Transcripts:ENSRNOT00000047287
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12592191825247790Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)122013902826430640Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121120049452308831Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)12129775522Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12348941648489416Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12138687564Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121847304152308831Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049752308831Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121526424852308831Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12133700600Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)121174352852308831Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)12138635130Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12128133365Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)121223300030490641Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121746497946784661Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)12128606299Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121618743852308831Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)12133700556Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121613502952308831Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743851213550Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)121120049452308831Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121874946936488809Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)12124849755Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)61120049452308831Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12141361854Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121874946934312613Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12274769447747694Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121847304152308831Rat
2303568Bw88Body weight QTL 883body mass (VT:0001259)body weight (CMO:0000012)12128606299Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12308718048087180Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12563330650633306Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121613502952308831Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12790162533938215Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743833700556Rat

Markers in Region
BE121325  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21215,416,818 - 15,416,977 (+)MAPPERmRatBN7.2
Rnor_6.01217,508,921 - 17,509,079NCBIRnor6.0
Rnor_5.01219,495,502 - 19,495,660UniSTSRnor5.0
RGSC_v3.41215,918,351 - 15,918,509UniSTSRGSC3.4
Celera1217,170,967 - 17,171,125UniSTS
RH 3.4 Map12243.2UniSTS
Cytogenetic Map12q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001007147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001437589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006248953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008768984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC127903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000047287   ⟹   ENSRNOP00000045984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,397,572 - 15,430,433 (-)Ensembl
Rnor_6.0 Ensembl1217,489,676 - 17,522,534 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000089418   ⟹   ENSRNOP00000071265
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,394 - 15,441,173 (-)Ensembl
Rnor_6.0 Ensembl1217,488,487 - 17,519,954 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102488   ⟹   ENSRNOP00000088736
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,426 - 15,441,571 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109016   ⟹   ENSRNOP00000087314
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,426 - 15,440,399 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110794   ⟹   ENSRNOP00000096888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,381 - 15,441,156 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113934   ⟹   ENSRNOP00000094861
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,426 - 15,440,399 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114443   ⟹   ENSRNOP00000095673
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,426 - 15,440,399 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118368   ⟹   ENSRNOP00000088072
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,396,381 - 15,441,571 (-)Ensembl
RefSeq Acc Id: NM_001007147   ⟹   NP_001007148
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,511,423 - 20,544,282 (-)NCBI
mRatBN7.21215,397,571 - 15,430,433 (-)NCBI
Rnor_6.01217,489,675 - 17,522,534 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
RGSC_v3.41215,899,105 - 15,931,964 (-)RGD
Celera1217,151,721 - 17,184,580 (-)RGD
Sequence:
RefSeq Acc Id: XM_006248941   ⟹   XP_006249003
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
mRatBN7.21215,396,378 - 15,441,277 (-)NCBI
Rnor_6.01217,488,482 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248942   ⟹   XP_006249004
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
Rnor_6.01217,489,730 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248943   ⟹   XP_006249005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,029 (-)NCBI
mRatBN7.21215,396,426 - 15,441,144 (-)NCBI
Rnor_6.01217,489,730 - 17,533,300 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248945   ⟹   XP_006249007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,553,664 (-)NCBI
mRatBN7.21215,396,426 - 15,439,846 (-)NCBI
Rnor_6.01217,489,730 - 17,531,969 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248946   ⟹   XP_006249008
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,030 (-)NCBI
mRatBN7.21215,396,426 - 15,441,184 (-)NCBI
Rnor_6.01217,489,730 - 17,533,300 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248947   ⟹   XP_006249009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,544,330 (-)NCBI
mRatBN7.21215,396,426 - 15,430,521 (-)NCBI
Rnor_6.01217,489,730 - 17,523,796 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248948   ⟹   XP_006249010
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
Rnor_6.01217,489,730 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248949   ⟹   XP_006249011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
Rnor_6.01217,489,730 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248951   ⟹   XP_006249013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,121 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
Rnor_6.01217,489,730 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248952   ⟹   XP_006249014
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,121 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
Rnor_6.01217,489,730 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248953   ⟹   XP_006249015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,121 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
Rnor_6.01217,489,730 - 17,533,334 (-)NCBI
Rnor_5.01219,475,063 - 19,519,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008768984   ⟹   XP_008767206
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,043 (-)NCBI
mRatBN7.21215,396,426 - 15,441,203 (-)NCBI
Rnor_6.01217,489,730 - 17,533,278 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039089559   ⟹   XP_038945487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,123 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
RefSeq Acc Id: XM_039089560   ⟹   XP_038945488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,031 (-)NCBI
mRatBN7.21215,396,426 - 15,441,144 (-)NCBI
RefSeq Acc Id: XM_039089561   ⟹   XP_038945489
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,031 (-)NCBI
mRatBN7.21215,396,426 - 15,441,185 (-)NCBI
RefSeq Acc Id: XM_039089562   ⟹   XP_038945490
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,544,330 (-)NCBI
mRatBN7.21215,396,426 - 15,430,521 (-)NCBI
RefSeq Acc Id: XM_039089564   ⟹   XP_038945492
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,020 (-)NCBI
mRatBN7.21215,396,426 - 15,440,404 (-)NCBI
RefSeq Acc Id: XM_039089565   ⟹   XP_038945493
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
mRatBN7.21215,396,426 - 15,441,277 (-)NCBI
RefSeq Acc Id: XM_039089566   ⟹   XP_038945494
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,030 (-)NCBI
mRatBN7.21215,396,426 - 15,441,259 (-)NCBI
RefSeq Acc Id: XM_039089567   ⟹   XP_038945495
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,535,331 (-)NCBI
mRatBN7.21215,396,426 - 15,421,500 (-)NCBI
RefSeq Acc Id: XM_063271458   ⟹   XP_063127528
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,123 (-)NCBI
RefSeq Acc Id: XM_063271459   ⟹   XP_063127529
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
RefSeq Acc Id: XM_063271460   ⟹   XP_063127530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
RefSeq Acc Id: XM_063271461   ⟹   XP_063127531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,553,655 (-)NCBI
RefSeq Acc Id: XM_063271462   ⟹   XP_063127532
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,123 (-)NCBI
RefSeq Acc Id: XM_063271463   ⟹   XP_063127533
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,554,961 (-)NCBI
RefSeq Acc Id: XM_063271464   ⟹   XP_063127534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,043 (-)NCBI
RefSeq Acc Id: XM_063271465   ⟹   XP_063127535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,005 (-)NCBI
RefSeq Acc Id: XM_063271466   ⟹   XP_063127536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,122 (-)NCBI
RefSeq Acc Id: XM_063271467   ⟹   XP_063127537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,043 (-)NCBI
RefSeq Acc Id: XM_063271468   ⟹   XP_063127538
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,043 (-)NCBI
RefSeq Acc Id: XM_063271469   ⟹   XP_063127539
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,121 (-)NCBI
RefSeq Acc Id: XM_063271470   ⟹   XP_063127540
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,121 (-)NCBI
RefSeq Acc Id: XM_063271471   ⟹   XP_063127541
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,554,970 (-)NCBI
RefSeq Acc Id: XM_063271472   ⟹   XP_063127542
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,510,230 - 20,555,041 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001007148 (Get FASTA)   NCBI Sequence Viewer  
  NP_001424518 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249003 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249004 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249005 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249007 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249008 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249009 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249010 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249011 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249013 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249014 (Get FASTA)   NCBI Sequence Viewer  
  XP_006249015 (Get FASTA)   NCBI Sequence Viewer  
  XP_008767206 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945487 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945488 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945489 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945490 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945492 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945493 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945494 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945495 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127528 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127529 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127530 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127531 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127532 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127533 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127534 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127535 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127536 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127537 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127538 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127539 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127540 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127541 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127542 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH85844 (Get FASTA)   NCBI Sequence Viewer  
  EDL89780 (Get FASTA)   NCBI Sequence Viewer  
  EDL89781 (Get FASTA)   NCBI Sequence Viewer  
  EDL89782 (Get FASTA)   NCBI Sequence Viewer  
  EDL89783 (Get FASTA)   NCBI Sequence Viewer  
  EDL89784 (Get FASTA)   NCBI Sequence Viewer  
  EDL89785 (Get FASTA)   NCBI Sequence Viewer  
  EDL89786 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000045984
  ENSRNOP00000045984.3
  ENSRNOP00000071265
  ENSRNOP00000071265.2
  ENSRNOP00000087314
  ENSRNOP00000087314.1
  ENSRNOP00000088072
  ENSRNOP00000088072.2
  ENSRNOP00000088736
  ENSRNOP00000088736.2
  ENSRNOP00000094861
  ENSRNOP00000094861.2
  ENSRNOP00000095673
  ENSRNOP00000095673.2
  ENSRNOP00000096888
  ENSRNOP00000096888.2
RefSeq Acc Id: NP_001007148   ⟸   NM_001007147
- UniProtKB: Q5U2W0 (UniProtKB/TrEMBL),   A0A8I6AQ96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249015   ⟸   XM_006248953
- Peptide Label: isoform X23
- UniProtKB: A0A8I6AQ96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249014   ⟸   XM_006248952
- Peptide Label: isoform X21
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249013   ⟸   XM_006248951
- Peptide Label: isoform X17
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249011   ⟸   XM_006248949
- Peptide Label: isoform X11
- UniProtKB: A0A8I6AAB7 (UniProtKB/TrEMBL),   A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249010   ⟸   XM_006248948
- Peptide Label: isoform X7
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249004   ⟸   XM_006248942
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A5F2 (UniProtKB/TrEMBL),   A0A0G2K016 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249003   ⟸   XM_006248941
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249008   ⟸   XM_006248946
- Peptide Label: isoform X5
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL),   A0A8I6APF3 (UniProtKB/TrEMBL),   A6K1X6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249005   ⟸   XM_006248943
- Peptide Label: isoform X5
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL),   A0A8I6APF3 (UniProtKB/TrEMBL),   A6K1X6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249007   ⟸   XM_006248945
- Peptide Label: isoform X5
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL),   A0A8I6APF3 (UniProtKB/TrEMBL),   A6K1X6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006249009   ⟸   XM_006248947
- Peptide Label: isoform X5
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL),   A0A8I6APF3 (UniProtKB/TrEMBL),   A6K1X6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008767206   ⟸   XM_008768984
- Peptide Label: isoform X14
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071265   ⟸   ENSRNOT00000089418
Ensembl Acc Id: ENSRNOP00000045984   ⟸   ENSRNOT00000047287
RefSeq Acc Id: XP_038945487   ⟸   XM_039089559
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945493   ⟸   XM_039089565
- Peptide Label: isoform X12
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945494   ⟸   XM_039089566
- Peptide Label: isoform X5
- UniProtKB: A0A8I6APF3 (UniProtKB/TrEMBL),   A6K1X6 (UniProtKB/TrEMBL),   A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945489   ⟸   XM_039089561
- Peptide Label: isoform X9
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945488   ⟸   XM_039089560
- Peptide Label: isoform X9
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945492   ⟸   XM_039089564
- Peptide Label: isoform X9
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945490   ⟸   XM_039089562
- Peptide Label: isoform X9
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945495   ⟸   XM_039089567
- Peptide Label: isoform X27
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000087314   ⟸   ENSRNOT00000109016
Ensembl Acc Id: ENSRNOP00000096888   ⟸   ENSRNOT00000110794
Ensembl Acc Id: ENSRNOP00000094861   ⟸   ENSRNOT00000113934
Ensembl Acc Id: ENSRNOP00000088736   ⟸   ENSRNOT00000102488
Ensembl Acc Id: ENSRNOP00000088072   ⟸   ENSRNOT00000118368
Ensembl Acc Id: ENSRNOP00000095673   ⟸   ENSRNOT00000114443
RefSeq Acc Id: XP_063127532   ⟸   XM_063271462
- Peptide Label: isoform X10
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127528   ⟸   XM_063271458
- Peptide Label: isoform X4
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127536   ⟸   XM_063271466
- Peptide Label: isoform X18
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127530   ⟸   XM_063271460
- Peptide Label: isoform X8
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127529   ⟸   XM_063271459
- Peptide Label: isoform X6
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127540   ⟸   XM_063271470
- Peptide Label: isoform X24
- UniProtKB: A0A8I6AQ96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127539   ⟸   XM_063271469
- Peptide Label: isoform X22
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127538   ⟸   XM_063271468
- Peptide Label: isoform X20
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127537   ⟸   XM_063271467
- Peptide Label: isoform X19
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127534   ⟸   XM_063271464
- Peptide Label: isoform X15
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127542   ⟸   XM_063271472
- Peptide Label: isoform X26
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127535   ⟸   XM_063271465
- Peptide Label: isoform X16
- UniProtKB: A0A8I6A5M4 (UniProtKB/TrEMBL),   A6K1X2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127541   ⟸   XM_063271471
- Peptide Label: isoform X25
- UniProtKB: A0A8I6AQ96 (UniProtKB/TrEMBL),   Q5U2W0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127533   ⟸   XM_063271463
- Peptide Label: isoform X13
- UniProtKB: A0A8I6ALL7 (UniProtKB/TrEMBL),   A6K1X3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127531   ⟸   XM_063271461
- Peptide Label: isoform X9
- UniProtKB: A0A0G2K016 (UniProtKB/TrEMBL)
Protein Domains
SUN

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K016-F1-model_v2 AlphaFold A0A0G2K016 1-915 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698471
Promoter ID:EPDNEW_R8995
Type:single initiation site
Name:Sun1_1
Description:Sad1 and UNC84 domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01217,522,620 - 17,522,680EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359142 AgrOrtholog
BioCyc Gene G2FUF-19885 BioCyc
Ensembl Genes ENSRNOG00000001299 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000047287 ENTREZGENE
  ENSRNOT00000047287.4 UniProtKB/TrEMBL
  ENSRNOT00000089418 ENTREZGENE
  ENSRNOT00000089418.3 UniProtKB/TrEMBL
  ENSRNOT00000102488 ENTREZGENE
  ENSRNOT00000102488.2 UniProtKB/TrEMBL
  ENSRNOT00000109016 ENTREZGENE
  ENSRNOT00000109016.2 UniProtKB/TrEMBL
  ENSRNOT00000110794 ENTREZGENE
  ENSRNOT00000110794.2 UniProtKB/TrEMBL
  ENSRNOT00000113934 ENTREZGENE
  ENSRNOT00000113934.2 UniProtKB/TrEMBL
  ENSRNOT00000114443 ENTREZGENE
  ENSRNOT00000114443.2 UniProtKB/TrEMBL
  ENSRNOT00000118368 ENTREZGENE
  ENSRNOT00000118368.2 UniProtKB/TrEMBL
Gene3D-CATH Galactose-binding domain-like UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7135918 IMAGE-MGC_LOAD
InterPro Sad1_UNC_C UniProtKB/TrEMBL
  SUN1-5 UniProtKB/TrEMBL
  SUN1_N UniProtKB/TrEMBL
  Sun_CC2 UniProtKB/TrEMBL
KEGG Report rno:360773 UniProtKB/TrEMBL
MGC_CLONE MGC:94535 IMAGE-MGC_LOAD
NCBI Gene 360773 ENTREZGENE
PANTHER PTHR12911 UniProtKB/TrEMBL
  PTHR12911:SF23 UniProtKB/TrEMBL
Pfam MRP UniProtKB/TrEMBL
  Sad1_UNC UniProtKB/TrEMBL
  Sun2_CC2 UniProtKB/TrEMBL
PhenoGen Sun1 PhenoGen
PROSITE SUN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001299 RatGTEx
UniProt A0A0G2K016 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A5F2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A5M4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AAB7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ALL7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6APF3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AQ96 ENTREZGENE, UniProtKB/TrEMBL
  A6K1X2 ENTREZGENE, UniProtKB/TrEMBL
  A6K1X3 ENTREZGENE, UniProtKB/TrEMBL
  A6K1X6 ENTREZGENE, UniProtKB/TrEMBL
  F7FM38_RAT UniProtKB/TrEMBL
  Q5U2W0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-01 Sun1  Sad1 and UNC84 domain containing 1  Unc84a  unc-84 homolog A (C. elegans)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Unc84a  unc-84 homolog A (C. elegans)    unc-84 homolog A  Name updated 1299863 APPROVED
2005-07-29 Unc84a  unc-84 homolog A      Symbol and Name status set to provisional 70820 PROVISIONAL