Pura (purine rich element binding protein A) - Rat Genome Database

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Gene: Pura (purine rich element binding protein A) Rattus norvegicus
Analyze
Symbol: Pura
Name: purine rich element binding protein A
RGD ID: 1308543
Description: Predicted to enable several functions, including DNA binding activity; DNA-binding transcription repressor activity, RNA polymerase II-specific; and mRNA regulatory element binding translation repressor activity. Predicted to be involved in dendritic transport of messenger ribonucleoprotein complex and negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including epithelial cell proliferation; lymphocyte proliferation; and negative regulation of DNA-templated transcription. Is active in postsynaptic density. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 31. Orthologous to human PURA (purine rich element binding protein A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC102557111; purine-rich element binding protein A; purine-rich single-stranded DNA-binding protein alpha; serine/arginine repetitive matrix protein 1-like; transcriptional activator protein Pur-alpha; vegetative cell wall protein gp1-like; WAS/WASL-interacting protein family member 3-like
RGD Orthologs
Human
Mouse
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81828,159,103 - 28,179,539 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1828,125,126 - 28,211,111 (+)EnsemblGRCr8
mRatBN7.21827,885,071 - 27,905,509 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1827,884,556 - 27,905,513 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1828,012,429 - 28,032,867 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01828,774,266 - 28,794,712 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01828,109,203 - 28,129,639 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01829,103,850 - 29,110,215 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,110,242 - 29,111,156 (+)Ensemblrn6Rnor6.0
Rnor_5.01828,817,907 - 28,820,657 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41828,916,722 - 28,925,008 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1827,615,341 - 27,621,754 (+)NCBICelera
RGSC_v3.11828,948,984 - 28,950,043 (+)NCBI
Cytogenetic Map18p11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,ISO)
dendrite  (IEA,ISO)
glutamatergic synapse  (IEA,ISO)
neuronal cell body  (IEA,ISO)
nucleus  (IDA,IEA,ISO)
postsynapse  (IEA,ISO)
postsynaptic density  (EXP,IDA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Single-stranded DNA-binding proteins PURalpha and PURbeta bind to a purine-rich negative regulatory element of the alpha-myosin heavy chain gene and control transcriptional and translational regulation of the gene expression. Implications in the repression of alpha-myosin heavy chain during heart failure. Gupta M, etal., J Biol Chem. 2003 Nov 7;278(45):44935-48. Epub 2003 Aug 21.
4. Proteomics analysis of rat brain postsynaptic density. Implications of the diverse protein functional groups for the integration of synaptic physiology. Li KW, etal., J Biol Chem. 2004 Jan 9;279(2):987-1002. doi: 10.1074/jbc.M303116200. Epub 2003 Oct 7.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9334258   PMID:9716182   PMID:10049721   PMID:10318844   PMID:10597240   PMID:12972605   PMID:15282343   PMID:15312650   PMID:15777841   PMID:16376299   PMID:18495661   PMID:19720825  
PMID:22658674   PMID:22673903   PMID:22681889   PMID:25931508   PMID:28404748   PMID:29476059   PMID:30361391   PMID:32357304  


Genomics

Comparative Map Data
Pura
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81828,159,103 - 28,179,539 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1828,125,126 - 28,211,111 (+)EnsemblGRCr8
mRatBN7.21827,885,071 - 27,905,509 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1827,884,556 - 27,905,513 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1828,012,429 - 28,032,867 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01828,774,266 - 28,794,712 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01828,109,203 - 28,129,639 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01829,103,850 - 29,110,215 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,110,242 - 29,111,156 (+)Ensemblrn6Rnor6.0
Rnor_5.01828,817,907 - 28,820,657 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41828,916,722 - 28,925,008 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1827,615,341 - 27,621,754 (+)NCBICelera
RGSC_v3.11828,948,984 - 28,950,043 (+)NCBI
Cytogenetic Map18p11NCBI
PURA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385140,114,109 - 140,125,619 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5140,107,777 - 140,125,619 (+)Ensemblhg38GRCh38
GRCh375139,493,694 - 139,505,204 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365139,473,892 - 139,476,505 (+)NCBIBuild 36Build 36hg18NCBI36
Build 345139,473,891 - 139,475,030NCBI
Celera5135,569,524 - 135,572,137 (+)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5134,636,880 - 134,642,173 (+)NCBIHuRef
CHM1_15138,926,813 - 138,932,106 (+)NCBICHM1_1
T2T-CHM13v2.05140,639,205 - 140,650,714 (+)NCBIT2T-CHM13v2.0
Pura
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391836,413,614 - 36,434,575 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1836,414,150 - 36,425,588 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381836,280,560 - 36,292,535 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1836,281,097 - 36,292,535 (+)Ensemblmm10GRCm38
MGSCv371836,440,816 - 36,447,899 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361836,407,136 - 36,414,223 (+)NCBIMGSCv36mm8
Celera1836,723,061 - 36,744,137 (+)NCBICelera
Cytogenetic Map18B2NCBI
Pura
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955418538,883 - 548,605 (-)NCBIChiLan1.0ChiLan1.0
PURA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1235,325,630 - 35,345,366 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl235,330,902 - 35,332,835 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha232,434,696 - 32,449,319 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0235,787,240 - 35,801,863 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl235,787,255 - 35,788,223 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1232,839,467 - 32,854,084 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0233,706,906 - 33,721,528 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0234,457,817 - 34,472,443 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pura
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213152,471,846 - 152,488,693 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365319,129,715 - 9,130,515 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365319,129,024 - 9,134,916 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PURA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2141,884,155 - 141,886,330 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.12141,877,775 - 141,899,259 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22147,793,990 - 147,813,506 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PURA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12342,757,963 - 42,767,393 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2342,764,263 - 42,765,231 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603435,115,690 - 35,128,119 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pura
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474332,884,552 - 32,885,517 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474332,878,677 - 32,888,650 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Pura
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1158,087,571 - 8,093,690 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pura
45 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:29
Count of miRNA genes:24
Interacting mature miRNAs:28
Transcripts:ENSRNOT00000025756
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182507112683910656Rat
2301409Cm70Cardiac mass QTL 700.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)18706572852065728Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)182201556261600538Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181564228031610627Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181221668431644508Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182682218671822186Rat
12904716Am21Aortic mass QTL 210.005aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)18706572852065728Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182349405785487725Rat
12904714Cm131Cardiac mass QTL 1310.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)18706572852065728Rat
12904715Cm132Cardiac mass QTL 1320.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)18706572852065728Rat
6903345Bp349Blood pressure QTL 3493.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182682218671822186Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181522610142690662Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182682218671822186Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18131610627Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182682218671822186Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18546045542690191Rat
6903349Bp351Blood pressure QTL 3513.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)182641582171415821Rat
6903351Bp352Blood pressure QTL 3523.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182682218671822186Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18131610627Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182682218671822186Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182682218671822186Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181221668431644508Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228031610627Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18144930869Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181955353285493247Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181206648257066482Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181206648285493247Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18381190230809809Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134566578Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18448264849482648Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18154490981Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181206648285493247Rat
11565454Kidm59Kidney mass QTL 590.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)18706572852065728Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228086134022Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134566578Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)18430735449307354Rat

Markers in Region
RH139009  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21827,889,667 - 27,889,834 (+)MAPPERmRatBN7.2
Rnor_6.01829,108,875 - 29,109,041NCBIRnor6.0
Rnor_5.01828,816,609 - 28,816,775UniSTSRnor5.0
RGSC_v3.41828,920,947 - 28,921,113UniSTSRGSC3.4
Celera1827,620,366 - 27,620,532UniSTS
RH 3.4 Map1783.8UniSTS
Cytogenetic Map18p11UniSTS
PURA__5615  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21827,891,489 - 27,892,345 (+)MAPPERmRatBN7.2
Rnor_6.01829,110,697 - 29,111,552NCBIRnor6.0
Rnor_5.01828,818,431 - 28,819,286UniSTSRnor5.0
RGSC_v3.41828,922,769 - 28,923,624UniSTSRGSC3.4
Celera1827,622,180 - 27,623,035UniSTS
Cytogenetic Map18p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000025756   ⟹   ENSRNOP00000025756
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1829,110,242 - 29,111,156 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094968   ⟹   ENSRNOP00000081444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1828,158,052 - 28,183,974 (+)Ensembl
mRatBN7.2 Ensembl1827,885,761 - 27,905,513 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098397   ⟹   ENSRNOP00000076624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1827,885,056 - 27,905,513 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099421   ⟹   ENSRNOP00000080018
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1828,125,126 - 28,179,725 (+)Ensembl
mRatBN7.2 Ensembl1827,884,556 - 27,905,513 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118427   ⟹   ENSRNOP00000081821
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1827,889,369 - 27,905,513 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000142191   ⟹   ENSRNOP00000109281
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1828,158,587 - 28,174,395 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000145302   ⟹   ENSRNOP00000110196
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1828,163,541 - 28,182,106 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000172881   ⟹   ENSRNOP00000112416
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1828,158,052 - 28,211,111 (+)Ensembl
RefSeq Acc Id: NM_001400915   ⟹   NP_001387844
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81828,159,103 - 28,179,539 (+)NCBI
mRatBN7.21827,885,071 - 27,905,509 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001387844 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000080018
GenBank Protein P86252 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSRNOP00000025756   ⟸   ENSRNOT00000025756
Ensembl Acc Id: ENSRNOP00000080018   ⟸   ENSRNOT00000099421
Ensembl Acc Id: ENSRNOP00000081821   ⟸   ENSRNOT00000118427
Ensembl Acc Id: ENSRNOP00000076624   ⟸   ENSRNOT00000098397
Ensembl Acc Id: ENSRNOP00000081444   ⟸   ENSRNOT00000094968
RefSeq Acc Id: NP_001387844   ⟸   NM_001400915
- UniProtKB: A0A8I5YBE8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000109281   ⟸   ENSRNOT00000142191
Ensembl Acc Id: ENSRNOP00000112416   ⟸   ENSRNOT00000172881
Ensembl Acc Id: ENSRNOP00000110196   ⟸   ENSRNOT00000145302

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P86252-F1-model_v2 AlphaFold P86252 1-138 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700718
Promoter ID:EPDNEW_R11240
Type:initiation region
Name:Pura_1
Description:purine rich element binding protein A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01829,110,190 - 29,110,250EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308543 AgrOrtholog
Ensembl Genes ENSRNOG00000019062 Ensembl
  ENSRNOG00000062721 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000099421 ENTREZGENE
Gene3D-CATH 3.30.2450.30 UniProtKB/Swiss-Prot
InterPro PUR-bd_fam UniProtKB/Swiss-Prot
NCBI Gene Pura ENTREZGENE
PANTHER PTHR12611 UniProtKB/Swiss-Prot
  PTHR12611:SF2 UniProtKB/Swiss-Prot
Pfam PurA UniProtKB/Swiss-Prot
PhenoGen Pura PhenoGen
RatGTEx ENSRNOG00000019062 RatGTEx
  ENSRNOG00000062721 RatGTEx
UniProt A0A8I5YBE8 ENTREZGENE, UniProtKB/TrEMBL
  P86252 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-02-15 Pura  purine rich element binding protein A  LOC102557111  WAS/WASL-interacting protein family member 3-like  Data merged from RGD:7498283 737654 PROVISIONAL
2013-12-17 LOC102557111  WAS/WASL-interacting protein family member 3-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Pura  purine rich element binding protein A   Pura_predicted  purine rich element binding protein A (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Pura_predicted  purine rich element binding protein A (predicted)      Symbol and Name status set to approved 70820 APPROVED