Ldhd (lactate dehydrogenase D) - Rat Genome Database

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Gene: Ldhd (lactate dehydrogenase D) Rattus norvegicus
Analyze
Symbol: Ldhd
Name: lactate dehydrogenase D
RGD ID: 1308107
Description: Predicted to enable D-lactate dehydrogenase (NAD+) activity; D-lactate dehydrogenase (cytochrome) activity; and flavin adenine dinucleotide binding activity. Predicted to be involved in lactate catabolic process. Located in mitochondrial inner membrane. Orthologous to human LDHD (lactate dehydrogenase D); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ac2-202; D-lactate dehydrogenase; LOC307858; probable D-lactate dehydrogenase, mitochondrial
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81956,492,827 - 56,497,695 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1956,482,924 - 56,509,197 (-)EnsemblGRCr8
mRatBN7.21939,583,529 - 39,588,397 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1939,573,621 - 39,595,575 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1946,382,661 - 46,387,530 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01947,035,988 - 47,040,857 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01949,340,625 - 49,345,491 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01943,826,989 - 43,848,937 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1943,826,993 - 43,848,937 (-)Ensemblrn6Rnor6.0
Rnor_5.01954,634,157 - 54,656,104 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41941,532,048 - 41,553,996 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1938,952,377 - 38,973,713 (-)NCBICelera
RGSC_v3.11941,536,931 - 41,558,877 (-)NCBI
Cytogenetic Map19q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
acetamide  (EXP)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
cocaine  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
dichloroacetic acid  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
epoxiconazole  (ISO)
ethylparaben  (ISO)
furan  (EXP)
genistein  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
glucose  (ISO)
hydrogen peroxide  (ISO)
indometacin  (EXP)
leflunomide  (EXP,ISO)
menadione  (ISO)
methamphetamine  (ISO)
monosodium L-glutamate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
ochratoxin A  (EXP)
okadaic acid  (ISO)
oxybenzone  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
parathion  (ISO)
perfluorononanoic acid  (ISO)
phenobarbital  (EXP,ISO)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
toxaphene  (EXP)
trichloroethene  (EXP,ISO)
triphenyl phosphate  (EXP,ISO)
tris(2-butoxyethyl) phosphate  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. D-Lactate transport and metabolism in rat liver mitochondria. de Bari L, etal., Biochem J. 2002 Jul 15;365(Pt 2):391-403.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14651853   PMID:18614015   PMID:30931947  


Genomics

Comparative Map Data
Ldhd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81956,492,827 - 56,497,695 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1956,482,924 - 56,509,197 (-)EnsemblGRCr8
mRatBN7.21939,583,529 - 39,588,397 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1939,573,621 - 39,595,575 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1946,382,661 - 46,387,530 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01947,035,988 - 47,040,857 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01949,340,625 - 49,345,491 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01943,826,989 - 43,848,937 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1943,826,993 - 43,848,937 (-)Ensemblrn6Rnor6.0
Rnor_5.01954,634,157 - 54,656,104 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41941,532,048 - 41,553,996 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1938,952,377 - 38,973,713 (-)NCBICelera
RGSC_v3.11941,536,931 - 41,558,877 (-)NCBI
Cytogenetic Map19q12NCBI
LDHD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381675,111,864 - 75,116,780 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1675,111,855 - 75,116,782 (-)Ensemblhg38GRCh38
GRCh371675,145,762 - 75,150,678 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361673,703,259 - 73,708,166 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341673,703,259 - 73,708,166NCBI
Celera1659,438,660 - 59,443,568 (-)NCBICelera
Cytogenetic Map16q23.1NCBI
HuRef1660,896,683 - 60,901,596 (-)NCBIHuRef
CHM1_11676,557,928 - 76,562,838 (-)NCBICHM1_1
T2T-CHM13v2.01681,158,564 - 81,163,478 (-)NCBIT2T-CHM13v2.0
Ldhd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398112,352,250 - 112,356,968 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8112,350,417 - 112,357,006 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm388111,625,611 - 111,630,336 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8111,623,785 - 111,630,374 (-)Ensemblmm10GRCm38
MGSCv378114,150,171 - 114,154,222 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368114,512,944 - 114,516,995 (-)NCBIMGSCv36mm8
Celera8115,853,791 - 115,857,842 (-)NCBICelera
Cytogenetic Map8E1NCBI
cM Map857.98NCBI
Ldhd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554842,460,762 - 2,466,702 (+)Ensembl
ChiLan1.0NW_0049554842,461,545 - 2,466,702 (+)NCBIChiLan1.0ChiLan1.0
LDHD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21884,825,632 - 84,834,203 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11690,747,639 - 90,756,189 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01655,680,683 - 55,685,596 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11675,032,078 - 75,037,012 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1675,032,078 - 75,037,012 (-)EnsemblpanPan2panpan1.1
LDHD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1575,566,495 - 75,591,093 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl575,587,012 - 75,591,373 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha575,563,388 - 75,568,895 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0575,943,312 - 75,948,813 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl575,943,333 - 75,948,810 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1575,847,749 - 75,853,254 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0575,670,453 - 75,675,932 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0576,162,692 - 76,168,177 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ldhd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934935,665,259 - 35,668,916 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647523,916,584 - 23,923,886 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647523,920,204 - 23,923,846 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LDHD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl612,548,132 - 12,555,648 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1612,548,098 - 12,552,237 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2612,295,765 - 12,298,447 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LDHD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1560,593,830 - 60,598,972 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl560,594,328 - 60,599,203 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604715,463,392 - 15,468,331 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ldhd
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474611,841,575 - 11,847,011 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474611,841,654 - 11,847,008 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Ldhd
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11731,310,845 - 31,315,600 (-)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:100
Count of miRNA genes:84
Interacting mature miRNAs:86
Transcripts:ENSRNOT00000044844
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)191922068964220689Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032907674246245Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)194622677874246245Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)193236531174246245Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)193628974246245Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)192409397369093973Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191083361874246245Rat
2303628Vencon9Ventilatory control QTL 90.005respiration trait (VT:0001943)minute ventilation (CMO:0000132)192318858668188586Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194438513474246245Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)193253961574246245Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)193177788874246245Rat
1554318Bmd5Bone mineral density QTL 512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)192318858668188586Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)192010930665109306Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19219431774246245Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)194172254674246245Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19219431774246245Rat

Markers in Region
RH142554  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81956,490,567 - 56,490,801 (+)Marker Load Pipeline
mRatBN7.21939,581,269 - 39,581,503 (+)MAPPERmRatBN7.2
Rnor_6.01943,834,632 - 43,834,865NCBIRnor6.0
Rnor_5.01954,641,799 - 54,642,032UniSTSRnor5.0
RGSC_v3.41941,539,691 - 41,539,924UniSTSRGSC3.4
Celera1938,959,422 - 38,959,655UniSTS
RH 3.4 Map19485.8UniSTS
Cytogenetic Map19q12UniSTS
RH143381  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21939,581,034 - 39,581,227 (+)MAPPERmRatBN7.2
Rnor_6.01943,834,397 - 43,834,589NCBIRnor6.0
Rnor_5.01954,641,564 - 54,641,756UniSTSRnor5.0
RGSC_v3.41941,539,456 - 41,539,648UniSTSRGSC3.4
Celera1938,959,187 - 38,959,379UniSTS
RH 3.4 Map19486.8UniSTS
Cytogenetic Map19q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 89 59 6 353 189 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000044844   ⟹   ENSRNOP00000046399
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1956,482,924 - 56,504,873 (-)Ensembl
mRatBN7.2 Ensembl1939,573,621 - 39,595,575 (-)Ensembl
Rnor_6.0 Ensembl1943,826,993 - 43,848,937 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000079539   ⟹   ENSRNOP00000072015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1956,492,827 - 56,497,695 (-)Ensembl
mRatBN7.2 Ensembl1939,583,524 - 39,588,397 (-)Ensembl
Rnor_6.0 Ensembl1943,838,087 - 43,841,795 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000093867   ⟹   ENSRNOP00000076355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1956,492,827 - 56,497,583 (-)Ensembl
mRatBN7.2 Ensembl1939,583,524 - 39,588,285 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000157161   ⟹   ENSRNOP00000106053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1956,492,827 - 56,498,463 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000166542   ⟹   ENSRNOP00000108390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1956,492,827 - 56,509,197 (-)Ensembl
RefSeq Acc Id: NM_001399130   ⟹   NP_001386059
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81956,492,827 - 56,497,695 (-)NCBI
mRatBN7.21939,583,529 - 39,588,397 (-)NCBI
Ensembl Acc Id: ENSRNOP00000072015   ⟸   ENSRNOT00000079539
Ensembl Acc Id: ENSRNOP00000046399   ⟸   ENSRNOT00000044844
Ensembl Acc Id: ENSRNOP00000076355   ⟸   ENSRNOT00000093867
RefSeq Acc Id: NP_001386059   ⟸   NM_001399130
- UniProtKB: A0A0G2K1W9 (UniProtKB/TrEMBL),   A6IZ97 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000106053   ⟸   ENSRNOT00000157161
Ensembl Acc Id: ENSRNOP00000108390   ⟸   ENSRNOT00000166542
Protein Domains
FAD-binding PCMH-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TPJ4-F1-model_v2 AlphaFold Q7TPJ4 1-501 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701161
Promoter ID:EPDNEW_R11674
Type:multiple initiation site
Name:Ldhd_1
Description:lactate dehydrogenase D
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01943,841,755 - 43,841,815EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308107 AgrOrtholog
BioCyc Gene G2FUF-5645 BioCyc
BioCyc Pathway PWY-8274 [pyruvate fermentation to (R)-lactate] BioCyc
BioCyc Pathway Image PWY-8274 BioCyc
Ensembl Genes ENSRNOG00000019036 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000044844.4 UniProtKB/TrEMBL
  ENSRNOT00000079539 ENTREZGENE
  ENSRNOT00000079539.3 UniProtKB/TrEMBL
  ENSRNOT00000093867.2 UniProtKB/TrEMBL
  ENSRNOT00000157161.1 UniProtKB/TrEMBL
  ENSRNOT00000166542.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.43.10 UniProtKB/TrEMBL
  3.30.465.10 UniProtKB/TrEMBL
  3.30.70.2190 UniProtKB/TrEMBL
  3.30.70.2740 UniProtKB/TrEMBL
  Vanillyl-alcohol Oxidase, Chain A, domain 4 UniProtKB/TrEMBL
InterPro FAD-bd_2 UniProtKB/TrEMBL
  FAD-bd_2-like_sf UniProtKB/TrEMBL
  FAD-bd_PCMH_sub1 UniProtKB/TrEMBL
  FAD-bd_PCMH_sub2 UniProtKB/TrEMBL
  FAD-linked_Oxase-like_C UniProtKB/TrEMBL
  FAD-linked_oxidase_C UniProtKB/TrEMBL
  Oxid_FAD_bind_N UniProtKB/TrEMBL
  Vanillyl_alc_oxidase_C-sub2 UniProtKB/TrEMBL
NCBI Gene 307858 ENTREZGENE
PANTHER D-LACTATE DEHYDROGENASE UniProtKB/TrEMBL
  D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED UniProtKB/TrEMBL
Pfam FAD-oxidase_C UniProtKB/TrEMBL
  FAD_binding_4 UniProtKB/TrEMBL
PhenoGen Ldhd PhenoGen
PROSITE FAD_PCMH UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019036 RatGTEx
Superfamily-SCOP FAD-binding_2 UniProtKB/TrEMBL
  FAD-binding_2 UniProtKB/TrEMBL
UniProt A0A0G2K1W9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y6D8_RAT UniProtKB/TrEMBL
  A0ABK0LS46_RAT UniProtKB/TrEMBL
  A0ABK0LW93_RAT UniProtKB/TrEMBL
  A6IZ96_RAT UniProtKB/TrEMBL
  A6IZ97 ENTREZGENE, UniProtKB/TrEMBL
  A6IZ98_RAT UniProtKB/TrEMBL
  A6IZ99_RAT UniProtKB/TrEMBL
  Q7TPJ4_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Ldhd  lactate dehydrogenase D  Ldhd_predicted  lactate dehydrogenase D (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Ldhd_predicted  lactate dehydrogenase D (predicted)      Symbol and Name status set to approved 70820 APPROVED