Smpx (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 41,049,354 - 41,107,323 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 37,233,209 - 37,292,266 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 37,234,294 - 37,276,708 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 38,423,422 - 38,481,226 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 41,890,629 - 41,948,431 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 39,575,342 - 39,633,141 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 40,029,200 - 40,086,870 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 40,030,248 - 40,086,870 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 40,340,762 - 40,397,380 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 58,521,059 - 58,581,070 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 58,574,529 - 58,634,539 (-) | NCBI | | | | | Celera | X | 37,866,028 - 37,923,593 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q21 | NCBI | | | | |
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SMPX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 21,705,978 - 21,758,116 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 21,705,978 - 21,758,116 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 21,724,096 - 21,776,234 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 21,634,012 - 21,686,151 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 21,483,747 - 21,535,887 | NCBI | | | | | Celera | X | 25,845,385 - 25,897,515 (-) | NCBI | | Celera | | | Cytogenetic Map | X | p22.12 | NCBI | | | | | HuRef | X | 19,465,725 - 19,517,905 (-) | NCBI | | HuRef | | | CHM1_1 | X | 21,754,516 - 21,806,704 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 21,289,285 - 21,341,420 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Smpx (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 156,481,969 - 156,535,587 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 156,481,906 - 156,535,587 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 157,698,973 - 157,752,591 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 157,698,910 - 157,752,591 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 154,137,050 - 154,190,521 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 153,043,223 - 153,096,694 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 140,952,572 - 141,005,978 (+) | NCBI | | Celera | | | Cytogenetic Map | X | F4 | NCBI | | | | | cM Map | X | 72.67 | NCBI | | | | |
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Smpx (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955509 | 2,067,351 - 2,093,732 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955509 | 2,043,854 - 2,185,294 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SMPX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 23,514,798 - 23,567,082 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 23,518,188 - 23,570,472 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 14,336,846 - 14,389,125 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 21,719,905 - 21,744,977 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 21,719,905 - 21,744,977 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SMPX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 17,520,564 - 17,578,453 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 17,520,644 - 17,573,614 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | ROS_Cfam_1.0 | X | 17,480,026 - 17,537,925 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 17,480,106 - 17,533,083 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 17,514,285 - 17,572,159 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 17,535,989 - 17,593,898 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 17,596,164 - 17,654,098 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Smpx (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | X | 10,498,541 - 10,554,663 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936624 | 2,603,171 - 2,659,364 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936624 | 2,603,210 - 2,659,368 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SMPX (Sus scrofa - pig) |
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SMPX (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | X | 20,170,996 - 20,234,693 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 20,172,347 - 20,227,028 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666056 | 22,040,729 - 22,068,492 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Smpx (Heterocephalus glaber - naked mole-rat) |
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