Dlg3 (discs large MAGUK scaffold protein 3)

Gene: Dlg3 (discs large MAGUK scaffold protein 3) Rattus norvegicus

Analyze

Symbol:

Dlg3

Name:

discs large MAGUK scaffold protein 3

RGD ID:

68423

Description:

Enables PDZ domain binding activity; ionotropic glutamate receptor binding activity; and protein phosphatase binding activity. A structural constituent of postsynaptic density. Predicted to be involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; receptor clustering; and regulation of postsynaptic membrane neurotransmitter receptor levels. Predicted to act upstream of or within establishment of planar polarity. Located in several cellular components, including dendritic shaft; growth cone; and postsynaptic density. Is active in glutamatergic synapse and postsynaptic density, intracellular component. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 90. Orthologous to human DLG3 (discs large MAGUK scaffold protein 3); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 4-[1-hydroxy-2-[4-(phenylmethyl)-1-piperidinyl]propyl]phenol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

discs large homolog 3; discs, large homolog 3; discs, large homolog 3 (Drosophila); disks large homolog 3; Dlgh3; PSD-95/SAP90-related protein 1; SAP-102; SAP102; synapse-associated protein 102

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DLG3 (discs large MAGUK scaffold protein 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Dlg3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dlg3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DLG3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DLG3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dlg3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DLG3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DLG3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dlg3 (discs large MAGUK scaffold protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	DHX16 (DEAH-box helicase 16)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	DLG3 (discs large MAGUK scaffold protein 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dlg3 (discs large MAGUK scaffold protein 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dlg3 (discs, large homolog 3 (Drosophila))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	dlg-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	dlg1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dlg3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	69,899,694 - 69,951,928 (+)	NCBI		GRCr8
mRatBN7.2	X	65,859,653 - 65,911,887 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	67,343,327 - 67,394,012 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	70,843,724 - 70,894,417 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	68,404,631 - 68,455,321 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	70,596,246 - 70,648,529 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	70,596,576 - 70,648,532 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	88,777,585 - 88,828,504 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	88,851,017 - 88,901,937 (+)	NCBI
Celera	X	66,218,231 - 66,268,819 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

epilepsy (ISO)

genetic disease (ISO)

intellectual disability (ISO)

non-syndromic X-linked intellectual disability (ISS)

non-syndromic X-linked intellectual disability 90 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

X-Linked Intellectual Developmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2-hydroxypropanoic acid (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-[1-hydroxy-2-[4-(phenylmethyl)-1-piperidinyl]propyl]phenol (EXP)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

amitrole (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

carbon dioxide (EXP)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cyclosporin A (ISO)

diethylstilbestrol (EXP)

dioxygen (EXP)

diuron (EXP)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (ISO)

fenvalerate (EXP)

folpet (ISO)

gentamycin (EXP)

ivermectin (ISO)

Licochalcone B (ISO)

lipopolysaccharide (ISO)

lovastatin (EXP)

maneb (ISO)

melphalan (ISO)

methimazole (EXP)

methoxychlor (EXP)

paracetamol (EXP,ISO)

paraquat (ISO)

perfluorononanoic acid (ISO)

perfluorooctanoic acid (EXP)

rac-lactic acid (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

tert-butyl hydroperoxide (ISO)

tetrachloromethane (EXP,ISO)

trichostatin A (ISO)

triphenyl phosphate (EXP)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell-cell adhesion (IBA)

chemical synaptic transmission (IBA,IEA)

establishment of planar polarity (IEA,ISO)

establishment or maintenance of epithelial cell apical/basal polarity (IBA,IEA,ISO)

maintenance of postsynaptic density structure (IEA)

receptor clustering (IBA)

receptor localization to synapse (IBA)

regulation of postsynaptic membrane neurotransmitter receptor levels (IBA,IEA,ISO)

Cellular Component

AMPA glutamate receptor complex (IEA,ISO)

basolateral plasma membrane (IBA)

bicellular tight junction (IEA,ISO)

cell-cell junction (ISO)

cytoplasm (IEA,ISO)

dendritic shaft (IDA)

glutamatergic synapse (IDA,IEA,IMP,ISO)

growth cone (IDA)

neuromuscular junction (IBA,IEA)

neuron projection (IBA,IEA)

neuronal cell body (IDA)

plasma membrane (ISO)

postsynaptic density (IDA,TAS)

postsynaptic density membrane (IBA)

postsynaptic density, intracellular component (IDA)

synapse (IDA,IEA)

Molecular Function

ionotropic glutamate receptor binding (IBA,IPI)

kinase binding (IEA,ISO)

PDZ domain binding (IPI)

phosphatase binding (IEA,ISO,ISS)

protein binding (IPI,ISO)

protein domain specific binding (IDA)

protein kinase binding (IBA)

protein phosphatase binding (IPI)

structural constituent of postsynaptic density (IDA,IMP)

ubiquitin protein ligase binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Regulation of NR1/NR2C N-methyl-D-aspartate (NMDA) receptors by phosphorylation.	Chen BS, etal., J Biol Chem. 2006 Jun 16;281(24):16583-90. Epub 2006 Apr 10.
2.	Plasma membrane Ca2+-atpase isoforms 2b and 4b interact promiscuously and selectively with members of the membrane-associated guanylate kinase family of PDZ (PSD95/Dlg/ZO-1) domain-containing proteins.	DeMarco SJ and Strehler EE, J Biol Chem. 2001 Jun 15;276(24):21594-600. Epub 2001 Mar 26.
3.	A critical interaction between NR2B and MAGUK in L-DOPA induced dyskinesia.	Gardoni F, etal., J Neurosci. 2006 Mar 15;26(11):2914-22.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
6.	Identification of multiple binding partners for the amino-terminal domain of synapse-associated protein 97.	Karnak D, etal., J Biol Chem 2002 Nov 29;277(48):46730-5. Epub 2002 Sep 25.
7.	Synaptic removal of diacylglycerol by DGKzeta and PSD-95 regulates dendritic spine maintenance.	Kim K, etal., EMBO J. 2009 Apr 22;28(8):1170-9. doi: 10.1038/emboj.2009.44. Epub 2009 Feb 19.
8.	Interaction of the N-methyl-D-aspartate receptor complex with a novel synapse-associated protein, SAP102.	Lau LF, etal., J Biol Chem. 1996 Aug 30;271(35):21622-8.
9.	The phosphoinositide 3-phosphatase MTMR2 interacts with PSD-95 and maintains excitatory synapses by modulating endosomal traffic.	Lee HW, etal., J Neurosci. 2010 Apr 21;30(16):5508-18. doi: 10.1523/JNEUROSCI.4283-09.2010.
10.	Protein trafficking and anchoring complexes revealed by proteomic analysis of inward rectifier potassium channel (Kir2.x)-associated proteins.	Leonoudakis D, etal., J Biol Chem. 2004 May 21;279(21):22331-46. Epub 2004 Mar 15.
11.	Selectivity and promiscuity of the first and second PDZ domains of PSD-95 and synapse-associated protein 102.	Lim IA, etal., J Biol Chem. 2002 Jun 14;277(24):21697-711. Epub 2002 Apr 5.
12.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
13.	SAP102, a novel postsynaptic protein that interacts with NMDA receptor complexes in vivo.	Muller BM, etal., Neuron. 1996 Aug;17(2):255-65.
14.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
15.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
16.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
17.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
18.	Differential mechanisms of glutamate receptor regulation of SynGAP in cortical neurones.	Rockliffe N and Gawler D, FEBS Lett. 2006 Feb 6;580(3):831-8. Epub 2006 Jan 18.
19.	NMDA receptor trafficking through an interaction between PDZ proteins and the exocyst complex.	Sans N, etal., Nat Cell Biol. 2003 Jun;5(6):520-30.
20.	DLG3, the gene encoding human neuroendocrine Dlg (NE-Dlg), is located within the 1.8-Mb dystonia-parkinsonism region at Xq13.1.	Stathakis DG, etal., Genomics 1998 Apr 15;49(2):310-3.
21.	Pursuit auditory tracking of dichotically presented tonal amplitudes.	Sussman HM, etal., J Speech Hear Res. 1975 Mar;18(1):74-81.
22.	SAPAPs. A family of PSD-95/SAP90-associated proteins localized at postsynaptic density.	Takeuchi M, etal., J Biol Chem 1997 May 2;272(18):11943-51.
23.	Mutations in the DLG3 Gene Cause Nonsyndromic X-Linked Mental Retardation.	Tarpey P, etal., Am J Hum Genet 2004 Jun 7;75(2).
24.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
25.	The G protein-coupled receptor CL1 interacts directly with proteins of the Shank family.	Tobaben S, etal., J Biol Chem 2000 Nov 17;275(46):36204-10.
26.	A novel family of adhesion-like molecules that interacts with the NMDA receptor.	Wang CY, etal., J Neurosci. 2006 Feb 22;26(8):2174-83.
27.	Fyn-mediated phosphorylation of NR2B Tyr-1336 controls calpain-mediated NR2B cleavage in neurons and heterologous systems.	Wu HY, etal., J Biol Chem. 2007 Jul 13;282(28):20075-87. doi: 10.1074/jbc.M700624200. Epub 2007 May 25.
28.	DGKiota regulates presynaptic release during mGluR-dependent LTD.	Yang J, etal., EMBO J. 2011 Jan 5;30(1):165-80. doi: 10.1038/emboj.2010.286. Epub 2010 Nov 30.
29.	SAP102 is a highly mobile MAGUK in spines.	Zheng CY, etal., J Neurosci. 2010 Mar 31;30(13):4757-66. doi: 10.1523/JNEUROSCI.6108-09.2010.

Additional References at PubMed

PMID:9581761	PMID:14596909	PMID:15458844	PMID:15992371	PMID:17046693	PMID:17670980	PMID:17938206	PMID:19104036	PMID:19389623	PMID:21209193	PMID:21920314	PMID:22632720
PMID:22664934	PMID:22871113	PMID:23486974	PMID:23946397	PMID:24509856	PMID:25429150	PMID:25555912	PMID:29574717	PMID:30053369	PMID:30067114	PMID:31682872

Genomics

Comparative Map Data

Dlg3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	69,899,694 - 69,951,928 (+)	NCBI		GRCr8
mRatBN7.2	X	65,859,653 - 65,911,887 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	67,343,327 - 67,394,012 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	70,843,724 - 70,894,417 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	68,404,631 - 68,455,321 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	70,596,246 - 70,648,529 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	70,596,576 - 70,648,532 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	88,777,585 - 88,828,504 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	88,851,017 - 88,901,937 (+)	NCBI
Celera	X	66,218,231 - 66,268,819 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

DLG3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	70,444,835 - 70,505,490 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	70,444,835 - 70,505,490 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	69,664,685 - 69,725,340 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	69,581,449 - 69,642,062 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	69,447,839 - 69,505,554	NCBI
Celera	X	70,018,031 - 70,078,673 (+)	NCBI		Celera
Cytogenetic Map	X	q13.1	NCBI
HuRef	X	63,486,322 - 63,547,144 (+)	NCBI		HuRef
CHM1_1	X	69,558,605 - 69,619,214 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	68,878,160 - 68,938,810 (+)	NCBI		T2T-CHM13v2.0

Dlg3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	99,811,200 - 99,862,016 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	99,811,328 - 99,862,016 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	100,767,411 - 100,818,410 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	100,767,722 - 100,818,410 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	97,963,062 - 98,013,749 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	96,970,466 - 97,021,127 (+)	NCBI		MGSCv36	mm8
Celera	X	87,686,891 - 87,737,556 (+)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	43.72	NCBI

Dlg3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	9,992,215 - 10,056,348 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955475	9,992,888 - 10,056,197 (+)	NCBI	ChiLan1.0	ChiLan1.0

DLG3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	70,121,582 - 70,181,058 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	70,125,184 - 70,184,660 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	59,712,755 - 59,773,372 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	69,771,482 - 69,831,376 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	69,771,477 - 69,831,369 (+)	Ensembl	panpan1.1		panPan2

DLG3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	54,886,700 - 54,941,502 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	54,886,389 - 54,939,675 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	45,713,141 - 45,768,580 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	55,853,333 - 55,908,759 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	55,853,116 - 55,908,756 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	53,822,238 - 53,877,672 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	55,153,323 - 55,208,774 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	55,080,264 - 55,135,709 (+)	NCBI		UU_Cfam_GSD_1.0

Dlg3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	47,220,157 - 47,276,307 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936762	982,258 - 1,038,492 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936762	982,331 - 1,038,486 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DLG3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	56,472,307 - 56,527,983 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	56,471,941 - 56,531,481 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	63,666,759 - 63,724,414 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DLG3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	60,290,280 - 60,346,954 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	60,290,630 - 60,346,953 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	2,134,119 - 2,191,196 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dlg3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624903	409,709 - 473,659 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624903	409,721 - 473,422 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Dlg3
39 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	360
Count of miRNA genes:	149
Interacting mature miRNAs:	161
Transcripts:	ENSRNOT00000003741, ENSRNOT00000045082
Prediction methods:	Miranda, Pita, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	14843113	120568734	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	41052407	146860749	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	41304447	112935181	Rat
61431	Cia19	Collagen induced arthritis QTL 19	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	65612192	120568734	Rat

Markers in Region

BE119338

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	65,872,920 - 65,873,090 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	70,609,544 - 70,609,713	NCBI	Rnor6.0
Rnor_5.0	X	71,481,301 - 71,481,470	UniSTS	Rnor5.0
RGSC_v3.4	X	88,790,552 - 88,790,721	UniSTS	RGSC3.4
Celera	X	66,231,196 - 66,231,365	UniSTS
Cytogenetic Map	X	q31	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3		3	2	1	2			74	20	31	11
Low		43	54	39	18	39	8	10		15	9		8
Below cutoff								1			1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280269	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U50147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U53367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000003741 ⟹ ENSRNOP00000003741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl
Rnor_6.0 Ensembl	X	70,596,577 - 70,647,298 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000045082 ⟹ ENSRNOP00000047310

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl
Rnor_6.0 Ensembl	X	70,596,576 - 70,648,527 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076057

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	70,644,361 - 70,646,372 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076079 ⟹ ENSRNOP00000067983

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,289 - 65,910,322 (+)	Ensembl
Rnor_6.0 Ensembl	X	70,596,580 - 70,648,532 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl
Rnor_6.0 Ensembl	X	70,596,848 - 70,648,532 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076456 ⟹ ENSRNOP00000068233

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	70,645,270 - 70,648,532 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000076503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,866,695 - 65,910,322 (+)	Ensembl
Rnor_6.0 Ensembl	X	70,603,582 - 70,648,527 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000088114 ⟹ ENSRNOP00000071634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl
Rnor_6.0 Ensembl	X	70,596,901 - 70,646,921 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000099103 ⟹ ENSRNOP00000096478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,289 - 65,910,322 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000105108 ⟹ ENSRNOP00000087105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	65,860,172 - 65,910,322 (+)	Ensembl

RefSeq Acc Id:

NM_031639 ⟹ NP_113827

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,900,003 - 69,950,696 (+)	NCBI
mRatBN7.2	X	65,859,947 - 65,910,655 (+)	NCBI
Rnor_6.0	X	70,596,577 - 70,647,298 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI
RGSC_v3.4	X	88,777,585 - 88,828,504 (+)	RGD
Celera	X	66,218,231 - 66,268,819 (+)	RGD

Sequence:

show sequence

TGACTCCACTCAGATCCATCCTGGGGACCTGAGCAGAAGAGGTTCTCGCCGCACCTAACCCTTG
CCTGGGAGCCCGATTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACAACGGGCGACACGGA
GCCGCCAGTGCTGGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGCCCCGGGACGC
CCGCCGCCCCAGGCCCGTCTCCGCCCGGGCACCCACGGTCTCCCCCCTTCTTGGTCTGAGCAGT
GCGAGTGTGCTAGGGAGCCCAGCGGGGGGGGCGGGCGGTTGGAAACTGGCGTGGGCTGGGGGGT
CCGAGCCGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTGCCCCGAGTGCTAT
GAGGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAGCCTCCTGGCTATGGGGACTGGCAGGTGC
CGGACCCCTATGGGCCAAGTGGGGGCAATGGGGCCAGCTCCGGTTATGGAGGCTACAGCTCGCA
GACCCTGCCTTCACAGGCAGGGGCTACCCCCACCCCTCGCACCAAGGCCAAGCTCATCCCCACA
GGCCGAGATGTGGGGCCAGTGCCCCCTAAGCCAGTACCCGGCAAGAACACCCCAAAACTCAACG
GCAGTGGCCCCAGCTGGTGGCCCGAGTGCACCTGTACCAATCGGGACTGGTATGAGCAGGCCAG
CCCTGCACCCCTCCTAGTGAACCCCGAGGCTCTGGAGCCCAGCCTATCGGTGAATGGCAGTGAT
GGCATGTTCAAGTATGAGGAGATAGTCCTGGAGCGGGGCAACTCTGGCCTGGGCTTCAGTATCG
CAGGTGGCATCGACAACCCTCATGTCCCTGATGACCCTGGCATCTTTATTACCAAGATCATTCC
TGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGACTGTGTGCTACGGGTGAATGAG
GTGGACGTGTCCGAGGTGGTGCACAGCCGGGCCGTGGAGGCACTGAAGGAGGCAGGCCCTGTGG
TGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCTGAGACTATCATGGAGGTCAACCTGCTCAA
AGGGCCAAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTGGTAACCAGCACATCCCAGGAGAC
AACAGCATCTATATCACCAAGATCATTGAAGGAGGAGCTGCTCAGAAAGATGGACGCCTACAGA
TTGGGGACCGGCTTCTTGCGGTGAACAACACCAATCTGCAGGATGTGAGGCATGAGGAAGCTGT
GGCCTCACTCAAGAACACATCAGACATGGTCTATCTGAAGGTGGCCAAGCCAGGCAGTCTCCAC
CTCAACGACATGTATGCTCCCCCCGACTATGCCAGCACTTTCACTGCCTTGGCTGACAATCATA
TAAGCCATAATTCCAGCCTGGGTTATCTTGGGGCAGTGGAGAGCAAGGTCACCTACCCTGCTCC
TCCTCAGGTGCCCCCTACTCGTTACTCTCCCATTCCCAGACACATGCTGGCTGAGGAAGACTTT
ACCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCTGGGCTTCAACATTGTAG
GAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGAGGCCCAGCAGACCTAAG
TGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCAACCTGAGGAATGCTACC
CATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCACCATTGTGGCCCAGTATA
GACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGAGAACAAATGATGAACAG
CAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGTCCTTGTATGTCAGGGCC
CTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGGACTCAGTTTCTCTTATG
GTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAAGCAAGGCTGGTGACTCC
ACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGGTTGAAAAGAAAGAGCGA
GCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGAGTCTAATCGGGACTTCC
CTGGGTTAAGTGACGATTATTATGGAGCAAAGAACCTGAAGGGAGTGACATCCAACACCAGTGA
CAGCGAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTGTCATATGAGCCAGTGACACGACAA
GAAATTCATTATGCCAGGCCTGTGATCATCTTGGGCCCAATGAAGGACCGAGTCAATGATGACC
TCATCTCTGAGTTCCCGCATAAGTTTGGATCCTGCGTGCCACATACCACCCGACCTCGGCGTGA
TAACGAGGTAGATGGACAGGATTACCACTTTGTGGTTTCCCGGGAACAGATGGAGAAGGATATT
CAGGACAACAAGTTCATCGAGGCAGGCCAGTTCAATGATAATCTCTACGGGACCAGCATCCAGT
CTGTGCGGGCGGTTGCAGAGAGGGGCAAGCACTGCATCTTAGACGTGTCCGGCAACGCTATAAA
GAGACTGCAGCAAGCACAACTTTATCCCATTGCCATTTTCATCAAGCCCAAGTCCATCGAAGCA
CTTATGGAAATGAACCGACGGCAGACATACGAACAAGCAAATAAGATCTTTGACAAAGCCATGA
AACTGGAGCAAGAATTTGGAGAATACTTTACAGCCATTGTACAGGGTGACTCACTGGAAGAGAT
TTATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGCACTACATTTGGGTCCCATCCCCT
GAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTCCCTCTTC
CCTCCTTCCTCTTCATTCCTGTCCCACGGGGAGAACAAATGACTACTGTTCTTGTCCCCCTTTT
TAGATATGTCAAAAATTGAGTTTTCTAGTCCTGTTCTTTTTTAAAAATGTTGTTTGGTTTTGGT
TTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACCGTGCCCATTCCTGCATGGACCTTT
CCCGCGCTAGACCAGGTGCAAACCCATCAGAGTTGTTGTTCTCATAAACACCCAGCAGAAGCGC
AGAGAAGAGACGAGGACGATCGGAAAGACAGACTCTGGACAACTGCACAGCTTGTGAAGTGAGC
GAAACAGCCCACGTGATGAGGTGCCCCTGGGACTTTCTACCCTGTACTGCTGGCTTGCAGCTCT
GAACAGTGCAAGCTAACGGCTACAGAAAGTATCTTATTTATATATAGATATATATATGTAATTT
ATATAAATATATAGAATTATTATATATATATATTATACACTCTTCTATAATATATATATATATT
CACATACATTGGACTAGAAAAATCTATGGAGATGTCCATCAATGGTACCTATGTTATTAGAGAA
AGTTTAATTTTCATATTCCCAATCAGATGACATCCTATGTTCCACTGGTTGGGAAGGGGTTGAC
AACAGTAGTAAGTGCTATACCAAAGACTTGGATTTGGTATTCTCTTCAGAGCTAAGGTTTGCTC
CAGGTGGGGCCAACCTACAGGAAGAGAAGGGGCTTTGGCTGGGAGCTTGAGCTTGGAGACTTGA
CTGAAAGCAGTTCTGCCCCTGCAG

hide sequence

RefSeq Acc Id:

XM_006257080 ⟹ XP_006257142

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,736 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,859,698 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,596,251 - 70,648,529 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI

Sequence:

show sequence

ACCCATTGAGCATCTCACTGCAACTCCCTCTTGCAAGCGGGGCGGGGTGGAGTGGCCAGAGGAC
AGCCTGAAATTGACAACACAAGGACACAGGATCGCAGGATCATCCTCTTCAGCTTTCTAATGGC
CCAAATCTCAGCAACCTATACTAGGATCGCCAGTAACCCCAGAGAACAGGGGAGATGTGTCTGA
GCCGGGGGGCGCCTCTGCTTCTGTTTCTTTAAGGAGCCGCTGTTTAGCATTCCTGCTGCTGCCG
CTGCCGCTGCCTGACTCTGCGTTCTGATTGGCTGGAATCAATTGAGAAGGGAGCCAGGGAGAGA
TGCTCTTGACTCCACTCAGATCCATCCTGGGGACCTGAGCAGAAGAGGTTCTCGCCGCACCTAA
CCCTTGCCTGGGAGCCCGATTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACAACGGGCGA
CACGGAGCCGCCAGTGCTGGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGCCCCG
GGACGCCCGCCGGGCCCCAGGCCCCGCTCCGCCCGGGCACCCCCACGGGTGCCCCCCCCTTCTT
GGTCTGAGCAGTGCGAGTGTGCTAGGGAGCCCAGCGGCGGCGGCGGCGTGGAAACTGGCGTGGG
CTGGGGGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTGCCCC
GAGTGCTATGAGGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAGCCTCCTGGCTATGGGGACT
GGCAGGTGCCGGACCCCTATGGGCCAAGTGGGGGCAATGGGGCCAGCTCCGGTTATGGAGGCTA
CAGCTCGCAGACCCTGCCTTCACAGGCAGGGGCTACCCCCACCCCTCGCACCAAGGCCAAGCTC
ATCCCCACAGGCCGAGATGTGGGGCCAGTGCCCCCTAAGCCAGTACCCGGCAAGAACACCCCAA
AACTCAACGGCAGTGGCCCCAGCTGGTGGCCCGAGTGCACCTGTACCAATCGGGACTGGTATGA
GCAGGCCAGCCCTGCACCCCTCCTAGTGAACCCCGAGGCTCTGGAGCCCAGCCTATCGGTGAAT
GGCAGTGATGGCATGTTCAAGTATGAGGAGATAGTCCTGGAGCGGGGCAACTCTGGCCTGGGCT
TCAGTATCGCAGGTGGCATCGACAACCCTCATGTCCCTGATGACCCTGGCATCTTTATTACCAA
GATCATTCCTGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGACTGTGTGCTACGG
GTGAATGAGGTGGACGTGTCCGAGGTGGTGCACAGCCGGGCCGTGGAGGCACTGAAGGAGGCAG
GCCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCTGAGACTATCATGGAGGTCAA
CCTGCTCAAAGGGCCAAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTGGTAACCAGCACATC
CCAGGAGACAACAGCATCTATATCACCAAGATCATTGAAGGAGGAGCTGCTCAGAAAGATGGAC
GCCTACAGATTGGGGACCGGCTTCTTGCGGTGAACAACACCAATCTGCAGGATGTGAGGCATGA
GGAAGCTGTGGCCTCACTCAAGAACACATCAGACATGGTCTATCTGAAGGTGGCCAAGCCAGGC
AGTCTCCACCTCAACGACATGTATGCTCCCCCCGACTATGCCAGCACTTTCACTGCCTTGGCTG
ACAATCATATAAGCCATAATTCCAGCCTGGGTTATCTTGGGGCAGTGGAGAGCAAGGTCACCTA
CCCTGCTCCTCCTCAGGTGCCCCCTACTCGTTACTCTCCCATTCCCAGACACATGCTGGCTGAG
GAAGACTTTACCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCTGGGCTTCA
ACATTGTAGGAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGAGGCCCAGC
AGACCTAAGTGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCAACCTGAGG
AATGCTACCCATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCACCATTGTGG
CCCAGTATAGACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGAGAACAAAT
GATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGTCCTTGTAT
GTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGGACTCAGTT
TCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAAGCAAGGCT
GGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGGTTGAAAAG
AAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGAGTCTAATC
GGTCGATCAAAACGAAACGTAAAAAGAGTTTTCGCCTCTCTCGAAAGTTTCCATTTTACAAGAG
CAAAGAAAACATGGCCCAGGAGAAGAGCATACAGGAACAGGGAGTGACATCCAACACCAGTGAC
AGCGAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTGTCATATGAGCCAGTGACACGACAAG
AAATTCATTATGCCAGGCCTGTGATCATCTTGGGCCCAATGAAGGACCGAGTCAATGATGACCT
CATCTCTGAGTTCCCGCATAAGTTTGGATCCTGCGTGCCACATACCACCCGACCTCGGCGTGAT
AACGAGGTAGATGGACAGGATTACCACTTTGTGGTTTCCCGGGAACAGATGGAGAAGGATATTC
AGGACAACAAGTTCATCGAGGCAGGCCAGTTCAATGATAATCTCTACGGGACCAGCATCCAGTC
TGTGCGGGCGGTTGCAGAGAGGGGCAAGCACTGCATCTTAGACGTGTCCGGCAACGCTATAAAG
AGACTGCAGCAAGCACAACTTTATCCCATTGCCATTTTCATCAAGCCCAAGTCCATCGAAGCAC
TTATGGAAATGAACCGACGGCAGACATACGAACAAGCAAATAAGATCTTTGACAAAGCCATGAA
ACTGGAGCAAGAATTTGGAGAATACTTTACAGCCATTGTACAGGGTGACTCACTGGAAGAGATT
TATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGCACTACATTTGGGTCCCATCCCCTG
AAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTCCCTCTTCC
CTCCTTCCTCTTCATTCCTGTCCCCACGGGGAGAACAAATGACTACTGTTCTTGTCCCCCTTTT
TAGATATGTCAAAAATTGAGTTTTCTAGTCCTGTTCTTTTTTAAAAATGTTGTTTGGTTTTGGT
TTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACCGTGCCCATTCCTGCATGGACCTTT
CCCGCGCTAGCACAGGTGCAAACCCATCAGAGTTGTTGTTCTCATAAACACCCAGCAGAAGCGC
AGAGAAGAGACGAGGACTGACGGAAAGACAGACTCTGGACAACTGCACAGCTTGTGAAGTGAGC
GAAACAGCCCACGTGATGAGGTGCCCCTGGGCATTTCTACCCTGTACTGCTGGCTTGCAGCTCT
GAACAGTGCAACGTAACGGCTACAGAAAGTATCTTATTTATATATAGATATATATATGTAATTT
ATATAAAATATATAGAAATTATTATATATATATATTATACACTCTTCTATAATATATATATATA
TTCACATACATTGGGACTAGAAAAATCTATGGAGATGTCCATCAATGGTACTATGTTATTAGAG
AAATGCTTTAATTTTCATATTCCAATCAGATGACATCCTATGTTCCACTGGTTGGGAAGGGGTT
GACAACAGTAGTAAGTGCTATACCAAAGCACTTGGATTTGGTCATTCTCTTCAGAGCTAAGGTT
TGCTCCAGGTGGGGCCAACCTACAGCGCAAGAGAAGGGGCTTTGGCTGGGAGCTTGAGCTTGGA
GACTTGACTGAAAGCAGTTGCTGCCCCTGCAGGGCAGCCATTCCTGTGCAGAAAGAGAGAATGA
ATGGCTAATGACGCTCCGGATGAAATTGCCTATTGTTCTATGCCGCCTGACGTGTCTGCATGAA
GGTTTCCTTTTTGTTCATTTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCTACTGTGTCAG
CCTTTTCATTATTCCAAATTTTACTTTTACTATTTAAGTGAATGCGTAGAATCCTATTTGCCAG
TGTTCTAAAGGCTTGTGAGGTTCGGAAGGAGCCAGGCCTGGGATACAGCAGTAACTCCGGCCTG
GCCATCCAGTCAACAGAGGGAAAGCAGGGGCTGGTGAGGGCAGAGAGTACAAGCTGCGCTCAGT
TACTATGCTGGACTTAGCTAGGGGTTCCTTCATGGGGCCACTGACAGGCGTAGGGACGAGCTTG
CCTTCCAGCTCTGTGCTGGGACAGCGGAAGAGCACCAGGCTTGACCAGCCGTGTAGTGAGTTGA
ATTTGGGTTCTTTTACTTTGTAACTGCTCCATTTGCCCTACCCCAGCCCCCTCACCAACAGCTG
GTAGCTTACTGTTTCTTCAAGAAGAAAGTAGACTTTAATGCTGTAAATTTGAGCTGTAGAGCTA
AGACTCGCTTACTGGTGAGCTGTGAAATCTTGTTGCTTTTTTCCCAGAGTCTGATGGCAGTGAC
TGGTCCAGGTAGTTTTCCTCCCACAGCCAGTGCAGGCAGCAGGTGTGGTCCAGGCCCTACCCCA
CCCCACTATGCTCCTTTGAAGCCAACGTGCCTCCCTCACCTCCACACTGGAGGGATGACGCAGG
GGAGAACATAGAATTGCTTGGCCCTCAACTGGGTTAGGACCATTGCAGGTGACGCAGTGTTGAA
GACACTTTAAAGCACTACCAGCCACATTCAGGAACTCTGTTCACAGGTATCCTACCAGCACAAT
GAGGCTAACTGTGACTCGTGGGGCCCAGAGTCAGAAGAAAGAAAAGGCAGCAGCTTTCCTTTGG
GCAGTACACTGGATTGAAGGCAAAGAGGGATAAAGCGACAGATGATTGTGACTCTCATGAGGGG
GGTGAGCGGAGAGTGTTGATTCTCTGATGGTAACTGACAGGTGTGAACAATGCTCAGCCCTCCC
TCCCTCCCAGGGAAGAAAAGCAAAGATTCAAAGTAAGCATGATAATAGTTGGTTTACCAGTGTT
CCTTCCAAGGAGACATATATTTTTTAATAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_006257081 ⟹ XP_006257143

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,738 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,859,700 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,596,253 - 70,648,529 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI

Sequence:

show sequence

CCATTGAGCATCTCACTGCAACTCCCTCTTGCAAGCGGGGCGGGGTGGAGTGGCCAGAGGACAG
CCTGAAATTGACAACACAAGGACACAGGATCGCAGGATCATCCTCTTCAGCTTTCTAATGGCCC
AAATCTCAGCAACCTATACTAGGATCGCCAGTAACCCCAGAGAACAGGGGAGATGTGTCTGAGC
CGGGGGGCGCCTCTGCTTCTGTTTCTTTAAGGAGCCGCTGTTTAGCATTCCTGCTGCTGCCGCT
GCCGCTGCCTGACTCTGCGTTCTGATTGGCTGGAATCAATTGAGAAGGGAGCCAGGGAGAGATG
CTCTTGACTCCACTCAGATCCATCCTGGGGACCTGAGCAGAAGAGGTTCTCGCCGCACCTAACC
CTTGCCTGGGAGCCCGATTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACAACGGGCGACA
CGGAGCCGCCAGTGCTGGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGCCCCGGG
ACGCCCGCCGGGCCCCAGGCCCCGCTCCGCCCGGGCACCCCCACGGGTGCCCCCCCCTTCTTGG
TCTGAGCAGTGCGAGTGTGCTAGGGAGCCCAGCGGCGGCGGCGGCGTGGAAACTGGCGTGGGCT
GGGGGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTGCCCCGA
GTGCTATGAGGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAGCCTCCTGGCTATGGGGACTGG
CAGGTGCCGGACCCCTATGGGCCAAGTGGGGGCAATGGGGCCAGCTCCGGTTATGGAGGCTACA
GCTCGCAGACCCTGCCTTCACAGGCAGGGGCTACCCCCACCCCTCGCACCAAGGCCAAGCTCAT
CCCCACAGGCCGAGATGTGGGGCCAGTGCCCCCTAAGCCAGTACCCGGCAAGAACACCCCAAAA
CTCAACGGCAGTGGCCCCAGCTGGTGGCCCGAGTGCACCTGTACCAATCGGGACTGGTATGAGC
AGGTGAATGGCAGTGATGGCATGTTCAAGTATGAGGAGATAGTCCTGGAGCGGGGCAACTCTGG
CCTGGGCTTCAGTATCGCAGGTGGCATCGACAACCCTCATGTCCCTGATGACCCTGGCATCTTT
ATTACCAAGATCATTCCTGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGACTGTG
TGCTACGGGTGAATGAGGTGGACGTGTCCGAGGTGGTGCACAGCCGGGCCGTGGAGGCACTGAA
GGAGGCAGGCCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCTGAGACTATCATG
GAGGTCAACCTGCTCAAAGGGCCAAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTGGTAACC
AGCACATCCCAGGAGACAACAGCATCTATATCACCAAGATCATTGAAGGAGGAGCTGCTCAGAA
AGATGGACGCCTACAGATTGGGGACCGGCTTCTTGCGGTGAACAACACCAATCTGCAGGATGTG
AGGCATGAGGAAGCTGTGGCCTCACTCAAGAACACATCAGACATGGTCTATCTGAAGGTGGCCA
AGCCAGGCAGTCTCCACCTCAACGACATGTATGCTCCCCCCGACTATGCCAGCACTTTCACTGC
CTTGGCTGACAATCATATAAGCCATAATTCCAGCCTGGGTTATCTTGGGGCAGTGGAGAGCAAG
GTCACCTACCCTGCTCCTCCTCAGGTGCCCCCTACTCGTTACTCTCCCATTCCCAGACACATGC
TGGCTGAGGAAGACTTTACCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCT
GGGCTTCAACATTGTAGGAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGA
GGCCCAGCAGACCTAAGTGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCA
ACCTGAGGAATGCTACCCATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCAC
CATTGTGGCCCAGTATAGACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGA
GAACAAATGATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGT
CCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGG
ACTCAGTTTCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAA
GCAAGGCTGGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGG
TTGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGA
GTCTAATCGGTCGATCAAAACGAAACGTAAAAAGAGTTTTCGCCTCTCTCGAAAGTTTCCATTT
TACAAGAGCAAAGAAAACATGGCCCAGGAGAAGAGCATACAGGAACAGGGAGTGACATCCAACA
CCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTGTCATATGAGCCAGTGAC
ACGACAAGAAATTCATTATGCCAGGCCTGTGATCATCTTGGGCCCAATGAAGGACCGAGTCAAT
GATGACCTCATCTCTGAGTTCCCGCATAAGTTTGGATCCTGCGTGCCACATACCACCCGACCTC
GGCGTGATAACGAGGTAGATGGACAGGATTACCACTTTGTGGTTTCCCGGGAACAGATGGAGAA
GGATATTCAGGACAACAAGTTCATCGAGGCAGGCCAGTTCAATGATAATCTCTACGGGACCAGC
ATCCAGTCTGTGCGGGCGGTTGCAGAGAGGGGCAAGCACTGCATCTTAGACGTGTCCGGCAACG
CTATAAAGAGACTGCAGCAAGCACAACTTTATCCCATTGCCATTTTCATCAAGCCCAAGTCCAT
CGAAGCACTTATGGAAATGAACCGACGGCAGACATACGAACAAGCAAATAAGATCTTTGACAAA
GCCATGAAACTGGAGCAAGAATTTGGAGAATACTTTACAGCCATTGTACAGGGTGACTCACTGG
AAGAGATTTATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGCACTACATTTGGGTCCC
ATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTC
CCTCTTCCCTCCTTCCTCTTCATTCCTGTCCCCACGGGGAGAACAAATGACTACTGTTCTTGTC
CCCCTTTTTAGATATGTCAAAAATTGAGTTTTCTAGTCCTGTTCTTTTTTAAAAATGTTGTTTG
GTTTTGGTTTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACCGTGCCCATTCCTGCAT
GGACCTTTCCCGCGCTAGCACAGGTGCAAACCCATCAGAGTTGTTGTTCTCATAAACACCCAGC
AGAAGCGCAGAGAAGAGACGAGGACTGACGGAAAGACAGACTCTGGACAACTGCACAGCTTGTG
AAGTGAGCGAAACAGCCCACGTGATGAGGTGCCCCTGGGCATTTCTACCCTGTACTGCTGGCTT
GCAGCTCTGAACAGTGCAACGTAACGGCTACAGAAAGTATCTTATTTATATATAGATATATATA
TGTAATTTATATAAAATATATAGAAATTATTATATATATATATTATACACTCTTCTATAATATA
TATATATATTCACATACATTGGGACTAGAAAAATCTATGGAGATGTCCATCAATGGTACTATGT
TATTAGAGAAATGCTTTAATTTTCATATTCCAATCAGATGACATCCTATGTTCCACTGGTTGGG
AAGGGGTTGACAACAGTAGTAAGTGCTATACCAAAGCACTTGGATTTGGTCATTCTCTTCAGAG
CTAAGGTTTGCTCCAGGTGGGGCCAACCTACAGCGCAAGAGAAGGGGCTTTGGCTGGGAGCTTG
AGCTTGGAGACTTGACTGAAAGCAGTTGCTGCCCCTGCAGGGCAGCCATTCCTGTGCAGAAAGA
GAGAATGAATGGCTAATGACGCTCCGGATGAAATTGCCTATTGTTCTATGCCGCCTGACGTGTC
TGCATGAAGGTTTCCTTTTTGTTCATTTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCTAC
TGTGTCAGCCTTTTCATTATTCCAAATTTTACTTTTACTATTTAAGTGAATGCGTAGAATCCTA
TTTGCCAGTGTTCTAAAGGCTTGTGAGGTTCGGAAGGAGCCAGGCCTGGGATACAGCAGTAACT
CCGGCCTGGCCATCCAGTCAACAGAGGGAAAGCAGGGGCTGGTGAGGGCAGAGAGTACAAGCTG
CGCTCAGTTACTATGCTGGACTTAGCTAGGGGTTCCTTCATGGGGCCACTGACAGGCGTAGGGA
CGAGCTTGCCTTCCAGCTCTGTGCTGGGACAGCGGAAGAGCACCAGGCTTGACCAGCCGTGTAG
TGAGTTGAATTTGGGTTCTTTTACTTTGTAACTGCTCCATTTGCCCTACCCCAGCCCCCTCACC
AACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAAAGTAGACTTTAATGCTGTAAATTTGAGCTG
TAGAGCTAAGACTCGCTTACTGGTGAGCTGTGAAATCTTGTTGCTTTTTTCCCAGAGTCTGATG
GCAGTGACTGGTCCAGGTAGTTTTCCTCCCACAGCCAGTGCAGGCAGCAGGTGTGGTCCAGGCC
CTACCCCACCCCACTATGCTCCTTTGAAGCCAACGTGCCTCCCTCACCTCCACACTGGAGGGAT
GACGCAGGGGAGAACATAGAATTGCTTGGCCCTCAACTGGGTTAGGACCATTGCAGGTGACGCA
GTGTTGAAGACACTTTAAAGCACTACCAGCCACATTCAGGAACTCTGTTCACAGGTATCCTACC
AGCACAATGAGGCTAACTGTGACTCGTGGGGCCCAGAGTCAGAAGAAAGAAAAGGCAGCAGCTT
TCCTTTGGGCAGTACACTGGATTGAAGGCAAAGAGGGATAAAGCGACAGATGATTGTGACTCTC
ATGAGGGGGGTGAGCGGAGAGTGTTGATTCTCTGATGGTAACTGACAGGTGTGAACAATGCTCA
GCCCTCCCTCCCTCCCAGGGAAGAAAAGCAAAGATTCAAAGTAAGCATGATAATAGTTGGTTTA
CCAGTGTTCCTTCCAAGGAGACATATATTTTTTAATAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_006257082 ⟹ XP_006257144

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,739 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,859,701 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,596,246 - 70,648,529 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI

Sequence:

show sequence

TAGGGACCCATTGAGCATCTCACTGCAACTCCCTCTTGCAAGCGGGGCGGGGTGGAGTGGCCAG
AGGACAGCCTGAAATTGACAACACAAGGACACAGGATCGCAGGATCATCCTCTTCAGCTTTCTA
ATGGCCCAAATCTCAGCAACCTATACTAGGATCGCCAGTAACCCCAGAGAACAGGGGAGATGTG
TCTGAGCCGGGGGGCGCCTCTGCTTCTGTTTCTTTAAGGAGCCGCTGTTTAGCATTCCTGCTGC
TGCCGCTGCCGCTGCCTGACTCTGCGTTCTGATTGGCTGGAATCAATTGAGAAGGGAGCCAGGG
AGAGATGCTCTTGACTCCACTCAGATCCATCCTGGGGACCTGAGCAGAAGAGGTTCTCGCCGCA
CCTAACCCTTGCCTGGGAGCCCGATTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACAACG
GGCGACACGGAGCCGCCAGTGCTGGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGG
CCCCGGGACGCCCGCCGGGCCCCAGGCCCCGCTCCGCCCGGGCACCCCCACGGGTGCCCCCCCC
TTCTTGGTCTGAGCAGTGCGAGTGTGCTAGGGAGCCCAGCGGCGGCGGCGGCGTGGAAACTGGC
GTGGGCTGGGGGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGT
GCCCCGAGTGCTATGAGGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAGCCTCCTGGCTATGG
GGACTGGCAGGTGCCGGACCCCTATGGGCCAAGTGGGGGCAATGGGGCCAGCTCCGGTTATGGA
GGCTACAGCTCGCAGACCCTGCCTTCACAGGCAGGGGCTACCCCCACCCCTCGCACCAAGGCCA
AGCTCATCCCCACAGGCCGAGATGTGGGGCCAGTGCCCCCTAAGCCAGTACCCGGCAAGAACAC
CCCAAAACTCAACGGCAGTGGCCCCAGCTGGTGGCCCGAGTGCACCTGTACCAATCGGGACTGG
TATGAGCAGGCCAGCCCTGCACCCCTCCTAGTGAACCCCGAGGCTCTGGAGCCCAGCCTATCGG
TGAATGGCAGTGATGGCATGTTCAAGTATGAGGAGATAGTCCTGGAGCGGGGCAACTCTGGCCT
GGGCTTCAGTATCGCAGGTGGCATCGACAACCCTCATGTCCCTGATGACCCTGGCATCTTTATT
ACCAAGATCATTCCTGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGACTGTGTGC
TACGGGTGAATGAGGTGGACGTGTCCGAGGTGGTGCACAGCCGGGCCGTGGAGGCACTGAAGGA
GGCAGGCCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCTGAGACTATCATGGAG
GTCAACCTGCTCAAAGGGCCAAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTGGTAACCAGC
ACATCCCAGGAGACAACAGCATCTATATCACCAAGATCATTGAAGGAGGAGCTGCTCAGAAAGA
TGGACGCCTACAGATTGGGGACCGGCTTCTTGCGGTGAACAACACCAATCTGCAGGATGTGAGG
CATGAGGAAGCTGTGGCCTCACTCAAGAACACATCAGACATGGTCTATCTGAAGGTGGCCAAGC
CAGGCAGTCTCCACCTCAACGACATGTATGCTCCCCCCGACTATGCCAGCACTTTCACTGCCTT
GGCTGACAATCATATAAGCCATAATTCCAGCCTGGGTTATCTTGGGGCAGTGGAGAGCAAGGTC
ACCTACCCTGCTCCTCCTCAGGTGCCCCCTACTCGTTACTCTCCCATTCCCAGACACATGCTGG
CTGAGGAAGACTTTACCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCTGGG
CTTCAACATTGTAGGAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGAGGC
CCAGCAGACCTAAGTGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCAACC
TGAGGAATGCTACCCATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCACCAT
TGTGGCCCAGTATAGACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGAGAA
CAAATGATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGTCCT
TGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGGACT
CAGTTTCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAAGCA
AGGCTGGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGGTTG
AAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGAGTC
TAATCGGGACTTCCCTGGGTTAAGTGACGATTATTATGGAGCAAAGAACCTGAAAGGACAAGAG
GATGCTATTTTGTCATATGAGCCAGTGACACGACAAGAAATTCATTATGCCAGGCCTGTGATCA
TCTTGGGCCCAATGAAGGACCGAGTCAATGATGACCTCATCTCTGAGTTCCCGCATAAGTTTGG
ATCCTGCGTGCCACATACCACCCGACCTCGGCGTGATAACGAGGTAGATGGACAGGATTACCAC
TTTGTGGTTTCCCGGGAACAGATGGAGAAGGATATTCAGGACAACAAGTTCATCGAGGCAGGCC
AGTTCAATGATAATCTCTACGGGACCAGCATCCAGTCTGTGCGGGCGGTTGCAGAGAGGGGCAA
GCACTGCATCTTAGACGTGTCCGGCAACGCTATAAAGAGACTGCAGCAAGCACAACTTTATCCC
ATTGCCATTTTCATCAAGCCCAAGTCCATCGAAGCACTTATGGAAATGAACCGACGGCAGACAT
ACGAACAAGCAAATAAGATCTTTGACAAAGCCATGAAACTGGAGCAAGAATTTGGAGAATACTT
TACAGCCATTGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAATCATTGAG
GACCAGTCTGGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACC
ATTCTCTTGTGAACAGAAGAAATCAAGTCCCTCTTCCCTCCTTCCTCTTCATTCCTGTCCCCAC
GGGGAGAACAAATGACTACTGTTCTTGTCCCCCTTTTTAGATATGTCAAAAATTGAGTTTTCTA
GTCCTGTTCTTTTTTAAAAATGTTGTTTGGTTTTGGTTTATTTTTTGGGATGATGCCATCTCAC
TCATCATGTGACCGTGCCCATTCCTGCATGGACCTTTCCCGCGCTAGCACAGGTGCAAACCCAT
CAGAGTTGTTGTTCTCATAAACACCCAGCAGAAGCGCAGAGAAGAGACGAGGACTGACGGAAAG
ACAGACTCTGGACAACTGCACAGCTTGTGAAGTGAGCGAAACAGCCCACGTGATGAGGTGCCCC
TGGGCATTTCTACCCTGTACTGCTGGCTTGCAGCTCTGAACAGTGCAACGTAACGGCTACAGAA
AGTATCTTATTTATATATAGATATATATATGTAATTTATATAAAATATATAGAAATTATTATAT
ATATATATTATACACTCTTCTATAATATATATATATATTCACATACATTGGGACTAGAAAAATC
TATGGAGATGTCCATCAATGGTACTATGTTATTAGAGAAATGCTTTAATTTTCATATTCCAATC
AGATGACATCCTATGTTCCACTGGTTGGGAAGGGGTTGACAACAGTAGTAAGTGCTATACCAAA
GCACTTGGATTTGGTCATTCTCTTCAGAGCTAAGGTTTGCTCCAGGTGGGGCCAACCTACAGCG
CAAGAGAAGGGGCTTTGGCTGGGAGCTTGAGCTTGGAGACTTGACTGAAAGCAGTTGCTGCCCC
TGCAGGGCAGCCATTCCTGTGCAGAAAGAGAGAATGAATGGCTAATGACGCTCCGGATGAAATT
GCCTATTGTTCTATGCCGCCTGACGTGTCTGCATGAAGGTTTCCTTTTTGTTCATTTTTAAGCT
GCTGTTAAACCAAAACCATGTTGTGCTACTGTGTCAGCCTTTTCATTATTCCAAATTTTACTTT
TACTATTTAAGTGAATGCGTAGAATCCTATTTGCCAGTGTTCTAAAGGCTTGTGAGGTTCGGAA
GGAGCCAGGCCTGGGATACAGCAGTAACTCCGGCCTGGCCATCCAGTCAACAGAGGGAAAGCAG
GGGCTGGTGAGGGCAGAGAGTACAAGCTGCGCTCAGTTACTATGCTGGACTTAGCTAGGGGTTC
CTTCATGGGGCCACTGACAGGCGTAGGGACGAGCTTGCCTTCCAGCTCTGTGCTGGGACAGCGG
AAGAGCACCAGGCTTGACCAGCCGTGTAGTGAGTTGAATTTGGGTTCTTTTACTTTGTAACTGC
TCCATTTGCCCTACCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAAA
GTAGACTTTAATGCTGTAAATTTGAGCTGTAGAGCTAAGACTCGCTTACTGGTGAGCTGTGAAA
TCTTGTTGCTTTTTTCCCAGAGTCTGATGGCAGTGACTGGTCCAGGTAGTTTTCCTCCCACAGC
CAGTGCAGGCAGCAGGTGTGGTCCAGGCCCTACCCCACCCCACTATGCTCCTTTGAAGCCAACG
TGCCTCCCTCACCTCCACACTGGAGGGATGACGCAGGGGAGAACATAGAATTGCTTGGCCCTCA
ACTGGGTTAGGACCATTGCAGGTGACGCAGTGTTGAAGACACTTTAAAGCACTACCAGCCACAT
TCAGGAACTCTGTTCACAGGTATCCTACCAGCACAATGAGGCTAACTGTGACTCGTGGGGCCCA
GAGTCAGAAGAAAGAAAAGGCAGCAGCTTTCCTTTGGGCAGTACACTGGATTGAAGGCAAAGAG
GGATAAAGCGACAGATGATTGTGACTCTCATGAGGGGGGTGAGCGGAGAGTGTTGATTCTCTGA
TGGTAACTGACAGGTGTGAACAATGCTCAGCCCTCCCTCCCTCCCAGGGAAGAAAAGCAAAGAT
TCAAAGTAAGCATGATAATAGTTGGTTTACCAGTGTTCCTTCCAAGGAGACATATATTTTTTAA
TAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_006257083 ⟹ XP_006257145

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,740 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,859,703 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,596,249 - 70,648,529 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI

Sequence:

show sequence

GGACCCATTGAGCATCTCACTGCAACTCCCTCTTGCAAGCGGGGCGGGGTGGAGTGGCCAGAGG
ACAGCCTGAAATTGACAACACAAGGACACAGGATCGCAGGATCATCCTCTTCAGCTTTCTAATG
GCCCAAATCTCAGCAACCTATACTAGGATCGCCAGTAACCCCAGAGAACAGGGGAGATGTGTCT
GAGCCGGGGGGCGCCTCTGCTTCTGTTTCTTTAAGGAGCCGCTGTTTAGCATTCCTGCTGCTGC
CGCTGCCGCTGCCTGACTCTGCGTTCTGATTGGCTGGAATCAATTGAGAAGGGAGCCAGGGAGA
GATGCTCTTGACTCCACTCAGATCCATCCTGGGGACCTGAGCAGAAGAGGTTCTCGCCGCACCT
AACCCTTGCCTGGGAGCCCGATTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACAACGGGC
GACACGGAGCCGCCAGTGCTGGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGCCC
CGGGACGCCCGCCGGGCCCCAGGCCCCGCTCCGCCCGGGCACCCCCACGGGTGCCCCCCCCTTC
TTGGTCTGAGCAGTGCGAGTGTGCTAGGGAGCCCAGCGGCGGCGGCGGCGTGGAAACTGGCGTG
GGCTGGGGGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTGCC
CCGAGTGCTATGAGGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAGCCTCCTGGCTATGGGGA
CTGGCAGGTGCCGGACCCCTATGGGCCAAGTGGGGGCAATGGGGCCAGCTCCGGTTATGGAGGC
TACAGCTCGCAGACCCTGCCTTCACAGGCAGGGGCTACCCCCACCCCTCGCACCAAGGCCAAGC
TCATCCCCACAGGCCGAGATGTGGGGCCAGTGCCCCCTAAGCCAGTACCCGGCAAGAACACCCC
AAAACTCAACGGCAGTGGCCCCAGCTGGTGGCCCGAGTGCACCTGTACCAATCGGGACTGGTAT
GAGCAGGTGAATGGCAGTGATGGCATGTTCAAGTATGAGGAGATAGTCCTGGAGCGGGGCAACT
CTGGCCTGGGCTTCAGTATCGCAGGTGGCATCGACAACCCTCATGTCCCTGATGACCCTGGCAT
CTTTATTACCAAGATCATTCCTGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGAC
TGTGTGCTACGGGTGAATGAGGTGGACGTGTCCGAGGTGGTGCACAGCCGGGCCGTGGAGGCAC
TGAAGGAGGCAGGCCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCTGAGACTAT
CATGGAGGTCAACCTGCTCAAAGGGCCAAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTGGT
AACCAGCACATCCCAGGAGACAACAGCATCTATATCACCAAGATCATTGAAGGAGGAGCTGCTC
AGAAAGATGGACGCCTACAGATTGGGGACCGGCTTCTTGCGGTGAACAACACCAATCTGCAGGA
TGTGAGGCATGAGGAAGCTGTGGCCTCACTCAAGAACACATCAGACATGGTCTATCTGAAGGTG
GCCAAGCCAGGCAGTCTCCACCTCAACGACATGTATGCTCCCCCCGACTATGCCAGCACTTTCA
CTGCCTTGGCTGACAATCATATAAGCCATAATTCCAGCCTGGGTTATCTTGGGGCAGTGGAGAG
CAAGGTCACCTACCCTGCTCCTCCTCAGGTGCCCCCTACTCGTTACTCTCCCATTCCCAGACAC
ATGCTGGCTGAGGAAGACTTTACCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAG
GCCTGGGCTTCAACATTGTAGGAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGC
AGGAGGCCCAGCAGACCTAAGTGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGA
GTCAACCTGAGGAATGCTACCCATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAG
TCACCATTGTGGCCCAGTATAGACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTT
GCGAGAACAAATGATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAG
AGGTCCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCC
AGGGACTCAGTTTCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTG
GCAAGCAAGGCTGGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAG
AGGGTTGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGA
TTGAGTCTAATCGGGACTTCCCTGGGTTAAGTGACGATTATTATGGAGCAAAGAACCTGAAAGG
ACAAGAGGATGCTATTTTGTCATATGAGCCAGTGACACGACAAGAAATTCATTATGCCAGGCCT
GTGATCATCTTGGGCCCAATGAAGGACCGAGTCAATGATGACCTCATCTCTGAGTTCCCGCATA
AGTTTGGATCCTGCGTGCCACATACCACCCGACCTCGGCGTGATAACGAGGTAGATGGACAGGA
TTACCACTTTGTGGTTTCCCGGGAACAGATGGAGAAGGATATTCAGGACAACAAGTTCATCGAG
GCAGGCCAGTTCAATGATAATCTCTACGGGACCAGCATCCAGTCTGTGCGGGCGGTTGCAGAGA
GGGGCAAGCACTGCATCTTAGACGTGTCCGGCAACGCTATAAAGAGACTGCAGCAAGCACAACT
TTATCCCATTGCCATTTTCATCAAGCCCAAGTCCATCGAAGCACTTATGGAAATGAACCGACGG
CAGACATACGAACAAGCAAATAAGATCTTTGACAAAGCCATGAAACTGGAGCAAGAATTTGGAG
AATACTTTACAGCCATTGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAAT
CATTGAGGACCAGTCTGGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAGAATCCCC
TCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTCCCTCTTCCCTCCTTCCTCTTCATTCCTG
TCCCCACGGGGAGAACAAATGACTACTGTTCTTGTCCCCCTTTTTAGATATGTCAAAAATTGAG
TTTTCTAGTCCTGTTCTTTTTTAAAAATGTTGTTTGGTTTTGGTTTATTTTTTGGGATGATGCC
ATCTCACTCATCATGTGACCGTGCCCATTCCTGCATGGACCTTTCCCGCGCTAGCACAGGTGCA
AACCCATCAGAGTTGTTGTTCTCATAAACACCCAGCAGAAGCGCAGAGAAGAGACGAGGACTGA
CGGAAAGACAGACTCTGGACAACTGCACAGCTTGTGAAGTGAGCGAAACAGCCCACGTGATGAG
GTGCCCCTGGGCATTTCTACCCTGTACTGCTGGCTTGCAGCTCTGAACAGTGCAACGTAACGGC
TACAGAAAGTATCTTATTTATATATAGATATATATATGTAATTTATATAAAATATATAGAAATT
ATTATATATATATATTATACACTCTTCTATAATATATATATATATTCACATACATTGGGACTAG
AAAAATCTATGGAGATGTCCATCAATGGTACTATGTTATTAGAGAAATGCTTTAATTTTCATAT
TCCAATCAGATGACATCCTATGTTCCACTGGTTGGGAAGGGGTTGACAACAGTAGTAAGTGCTA
TACCAAAGCACTTGGATTTGGTCATTCTCTTCAGAGCTAAGGTTTGCTCCAGGTGGGGCCAACC
TACAGCGCAAGAGAAGGGGCTTTGGCTGGGAGCTTGAGCTTGGAGACTTGACTGAAAGCAGTTG
CTGCCCCTGCAGGGCAGCCATTCCTGTGCAGAAAGAGAGAATGAATGGCTAATGACGCTCCGGA
TGAAATTGCCTATTGTTCTATGCCGCCTGACGTGTCTGCATGAAGGTTTCCTTTTTGTTCATTT
TTAAGCTGCTGTTAAACCAAAACCATGTTGTGCTACTGTGTCAGCCTTTTCATTATTCCAAATT
TTACTTTTACTATTTAAGTGAATGCGTAGAATCCTATTTGCCAGTGTTCTAAAGGCTTGTGAGG
TTCGGAAGGAGCCAGGCCTGGGATACAGCAGTAACTCCGGCCTGGCCATCCAGTCAACAGAGGG
AAAGCAGGGGCTGGTGAGGGCAGAGAGTACAAGCTGCGCTCAGTTACTATGCTGGACTTAGCTA
GGGGTTCCTTCATGGGGCCACTGACAGGCGTAGGGACGAGCTTGCCTTCCAGCTCTGTGCTGGG
ACAGCGGAAGAGCACCAGGCTTGACCAGCCGTGTAGTGAGTTGAATTTGGGTTCTTTTACTTTG
TAACTGCTCCATTTGCCCTACCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTTTCTTCAA
GAAGAAAGTAGACTTTAATGCTGTAAATTTGAGCTGTAGAGCTAAGACTCGCTTACTGGTGAGC
TGTGAAATCTTGTTGCTTTTTTCCCAGAGTCTGATGGCAGTGACTGGTCCAGGTAGTTTTCCTC
CCACAGCCAGTGCAGGCAGCAGGTGTGGTCCAGGCCCTACCCCACCCCACTATGCTCCTTTGAA
GCCAACGTGCCTCCCTCACCTCCACACTGGAGGGATGACGCAGGGGAGAACATAGAATTGCTTG
GCCCTCAACTGGGTTAGGACCATTGCAGGTGACGCAGTGTTGAAGACACTTTAAAGCACTACCA
GCCACATTCAGGAACTCTGTTCACAGGTATCCTACCAGCACAATGAGGCTAACTGTGACTCGTG
GGGCCCAGAGTCAGAAGAAAGAAAAGGCAGCAGCTTTCCTTTGGGCAGTACACTGGATTGAAGG
CAAAGAGGGATAAAGCGACAGATGATTGTGACTCTCATGAGGGGGGTGAGCGGAGAGTGTTGAT
TCTCTGATGGTAACTGACAGGTGTGAACAATGCTCAGCCCTCCCTCCCTCCCAGGGAAGAAAAG
CAAAGATTCAAAGTAAGCATGATAATAGTTGGTTTACCAGTGTTCCTTCCAAGGAGACATATAT
TTTTTAATAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_006257084 ⟹ XP_006257146

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,906,719 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,866,946 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,603,571 - 70,648,529 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI

Sequence:

show sequence

AGGGTGGGGCTTAGGTGGCTGCTGGGCTAGCTGCGGTGGAGACAGAAGGGTAGATTGACCCGGG
GAGAACCAGAGGAGCCATGGAGAGGGCTCGCAAGTTCTCAGGCTCAAGTTTGGCCCTGGGTTTG
GGCTCGGCCTCGGCTTCAGCCTGGAGGAGGGCTTCGCAGAGGTGGGCCTGGCCGCTCCGCTCCC
TGCGGCCTGGAGGGGAAGCCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCT
GGGCTTCAACATTGTAGGAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGA
GGCCCAGCAGACCTAAGTGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCA
ACCTGAGGAATGCTACCCATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCAC
CATTGTGGCCCAGTATAGACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGA
GAACAAATGATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGT
CCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGG
ACTCAGTTTCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAA
GCAAGGCTGGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGG
TTGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGA
GTCTAATCGGTCGATCAAAACGAAACGTAAAAAGAGTTTTCGCCTCTCTCGAAAGTTTCCATTT
TACAAGAGCAAAGAAAACATGGCCCAGGAGAAGAGCATACAGGAACAGGGAGTGACATCCAACA
CCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTGTCATATGAGCCAGTGAC
ACGACAAGAAATTCATTATGCCAGGCCTGTGATCATCTTGGGCCCAATGAAGGACCGAGTCAAT
GATGACCTCATCTCTGAGTTCCCGCATAAGTTTGGATCCTGCGTGCCACATACCACCCGACCTC
GGCGTGATAACGAGGTAGATGGACAGGATTACCACTTTGTGGTTTCCCGGGAACAGATGGAGAA
GGATATTCAGGACAACAAGTTCATCGAGGCAGGCCAGTTCAATGATAATCTCTACGGGACCAGC
ATCCAGTCTGTGCGGGCGGTTGCAGAGAGGGGCAAGCACTGCATCTTAGACGTGTCCGGCAACG
CTATAAAGAGACTGCAGCAAGCACAACTTTATCCCATTGCCATTTTCATCAAGCCCAAGTCCAT
CGAAGCACTTATGGAAATGAACCGACGGCAGACATACGAACAAGCAAATAAGATCTTTGACAAA
GCCATGAAACTGGAGCAAGAATTTGGAGAATACTTTACAGCCATTGTACAGGGTGACTCACTGG
AAGAGATTTATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGCACTACATTTGGGTCCC
ATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTC
CCTCTTCCCTCCTTCCTCTTCATTCCTGTCCCCACGGGGAGAACAAATGACTACTGTTCTTGTC
CCCCTTTTTAGATATGTCAAAAATTGAGTTTTCTAGTCCTGTTCTTTTTTAAAAATGTTGTTTG
GTTTTGGTTTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACCGTGCCCATTCCTGCAT
GGACCTTTCCCGCGCTAGCACAGGTGCAAACCCATCAGAGTTGTTGTTCTCATAAACACCCAGC
AGAAGCGCAGAGAAGAGACGAGGACTGACGGAAAGACAGACTCTGGACAACTGCACAGCTTGTG
AAGTGAGCGAAACAGCCCACGTGATGAGGTGCCCCTGGGCATTTCTACCCTGTACTGCTGGCTT
GCAGCTCTGAACAGTGCAACGTAACGGCTACAGAAAGTATCTTATTTATATATAGATATATATA
TGTAATTTATATAAAATATATAGAAATTATTATATATATATATTATACACTCTTCTATAATATA
TATATATATTCACATACATTGGGACTAGAAAAATCTATGGAGATGTCCATCAATGGTACTATGT
TATTAGAGAAATGCTTTAATTTTCATATTCCAATCAGATGACATCCTATGTTCCACTGGTTGGG
AAGGGGTTGACAACAGTAGTAAGTGCTATACCAAAGCACTTGGATTTGGTCATTCTCTTCAGAG
CTAAGGTTTGCTCCAGGTGGGGCCAACCTACAGCGCAAGAGAAGGGGCTTTGGCTGGGAGCTTG
AGCTTGGAGACTTGACTGAAAGCAGTTGCTGCCCCTGCAGGGCAGCCATTCCTGTGCAGAAAGA
GAGAATGAATGGCTAATGACGCTCCGGATGAAATTGCCTATTGTTCTATGCCGCCTGACGTGTC
TGCATGAAGGTTTCCTTTTTGTTCATTTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCTAC
TGTGTCAGCCTTTTCATTATTCCAAATTTTACTTTTACTATTTAAGTGAATGCGTAGAATCCTA
TTTGCCAGTGTTCTAAAGGCTTGTGAGGTTCGGAAGGAGCCAGGCCTGGGATACAGCAGTAACT
CCGGCCTGGCCATCCAGTCAACAGAGGGAAAGCAGGGGCTGGTGAGGGCAGAGAGTACAAGCTG
CGCTCAGTTACTATGCTGGACTTAGCTAGGGGTTCCTTCATGGGGCCACTGACAGGCGTAGGGA
CGAGCTTGCCTTCCAGCTCTGTGCTGGGACAGCGGAAGAGCACCAGGCTTGACCAGCCGTGTAG
TGAGTTGAATTTGGGTTCTTTTACTTTGTAACTGCTCCATTTGCCCTACCCCAGCCCCCTCACC
AACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAAAGTAGACTTTAATGCTGTAAATTTGAGCTG
TAGAGCTAAGACTCGCTTACTGGTGAGCTGTGAAATCTTGTTGCTTTTTTCCCAGAGTCTGATG
GCAGTGACTGGTCCAGGTAGTTTTCCTCCCACAGCCAGTGCAGGCAGCAGGTGTGGTCCAGGCC
CTACCCCACCCCACTATGCTCCTTTGAAGCCAACGTGCCTCCCTCACCTCCACACTGGAGGGAT
GACGCAGGGGAGAACATAGAATTGCTTGGCCCTCAACTGGGTTAGGACCATTGCAGGTGACGCA
GTGTTGAAGACACTTTAAAGCACTACCAGCCACATTCAGGAACTCTGTTCACAGGTATCCTACC
AGCACAATGAGGCTAACTGTGACTCGTGGGGCCCAGAGTCAGAAGAAAGAAAAGGCAGCAGCTT
TCCTTTGGGCAGTACACTGGATTGAAGGCAAAGAGGGATAAAGCGACAGATGATTGTGACTCTC
ATGAGGGGGGTGAGCGGAGAGTGTTGATTCTCTGATGGTAACTGACAGGTGTGAACAATGCTCA
GCCCTCCCTCCCTCCCAGGGAAGAAAAGCAAAGATTCAAAGTAAGCATGATAATAGTTGGTTTA
CCAGTGTTCCTTCCAAGGAGACATATATTTTTTAATAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_006257085 ⟹ XP_006257147

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,909,455 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,869,471 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,605,385 - 70,648,529 (+)	NCBI
Rnor_5.0	X	71,468,290 - 71,520,286 (+)	NCBI

Sequence:

show sequence

AAGGGAAGGTGGGCAGAGACGATGAGTTTCAACTTATACTTAGCATTGGCTTATCTCACCGTAG
GTAACAAAGCCATTTGACCAGGTCCGCGGTATTCTAGTGTAGTCCCCTCTTATTTCCTTTTCCC
TCTAGACAGTGTGGTAGCTATGGTGCTCTGGGAGCATCCATCAAGGCAGTGCTAAGATCCTGCA
GATGAGGAATGCAGTACTGCAGGAAGCCTGTAGCGGGCAGCAGCCCTCAAGAAACACCACCAAA
AGATTTAAGGGCAAACAGAGGGAGAATGAGGGCTCAAAGTGGTCATTGGGAATTATGTGCCCTG
GGAAAGAGTAACTCGGTTAGAAGAACTTCAAAGAGTAAGAAATCAGACCTCCATGGATTAGATC
TTGGAGGTCCCACTTATTTCCCTTCATCAAAATAAGGGGATACTAAGCCCTTGGGATGGGGGGG
GGGTCAGGAATAGAATCACACCCATATGGAGATCTTTGTATTCTCAGCTAGTAGGCGAGTGGGC
GGAGCCGGTTAAGCAAACAAAGGTGTTTGATTGGCCTGGGCCAGCGGAGGCCCAGGTGAGGAGG
TGAACTGTAGGAAGGCGCGTCCCAGCCTGCCAGTCATCTGGACAACCATTGGTGCGCCGAGCGC
GGCCTCCAGCCGCACGCCCCGCCCCCTGACCCAGGCGGAGGGCGACGGGCGCCCCTCCTCCCCT
CGCGCCTCTGGTGTCTCCTCCTCTATCCCCTCCCCCTCCTCCCCTTCTCCCCTCCTCCCGCGCG
CCCCGCTTTGTGTCCGTGGTCTCTCGCGCGGGACAGAGGGACCGGCCGGAGCTGGCGCTTTCTC
GACACTAGACCTGGACTCCGACTGGGCGCCAGAGTACAGTCGCTTTGAATCCAAGATCCATGAC
TTGCGAGAACAAATGATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGA
AGAGGTCCTTGTATGTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAG
CCAGGGACTCAGTTTCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGG
TGGCAAGCAAGGCTGGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAA
AGAGGGTTGAAAAGAAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGAT
GATTGAGTCTAATCGGTCGATCAAAACGAAACGTAAAAAGAGTTTTCGCCTCTCTCGAAAGTTT
CCATTTTACAAGAGCAAAGAAAACATGGCCCAGGAGAAGAGCATACAGGAACAGGGAGTGACAT
CCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTGTCATATGAGCC
AGTGACACGACAAGAAATTCATTATGCCAGGCCTGTGATCATCTTGGGCCCAATGAAGGACCGA
GTCAATGATGACCTCATCTCTGAGTTCCCGCATAAGTTTGGATCCTGCGTGCCACATACCACCC
GACCTCGGCGTGATAACGAGGTAGATGGACAGGATTACCACTTTGTGGTTTCCCGGGAACAGAT
GGAGAAGGATATTCAGGACAACAAGTTCATCGAGGCAGGCCAGTTCAATGATAATCTCTACGGG
ACCAGCATCCAGTCTGTGCGGGCGGTTGCAGAGAGGGGCAAGCACTGCATCTTAGACGTGTCCG
GCAACGCTATAAAGAGACTGCAGCAAGCACAACTTTATCCCATTGCCATTTTCATCAAGCCCAA
GTCCATCGAAGCACTTATGGAAATGAACCGACGGCAGACATACGAACAAGCAAATAAGATCTTT
GACAAAGCCATGAAACTGGAGCAAGAATTTGGAGAATACTTTACAGCCATTGTACAGGGTGACT
CACTGGAAGAGATTTATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGCACTACATTTG
GGTCCCATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAAT
CAAGTCCCTCTTCCCTCCTTCCTCTTCATTCCTGTCCCCACGGGGAGAACAAATGACTACTGTT
CTTGTCCCCCTTTTTAGATATGTCAAAAATTGAGTTTTCTAGTCCTGTTCTTTTTTAAAAATGT
TGTTTGGTTTTGGTTTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACCGTGCCCATTC
CTGCATGGACCTTTCCCGCGCTAGCACAGGTGCAAACCCATCAGAGTTGTTGTTCTCATAAACA
CCCAGCAGAAGCGCAGAGAAGAGACGAGGACTGACGGAAAGACAGACTCTGGACAACTGCACAG
CTTGTGAAGTGAGCGAAACAGCCCACGTGATGAGGTGCCCCTGGGCATTTCTACCCTGTACTGC
TGGCTTGCAGCTCTGAACAGTGCAACGTAACGGCTACAGAAAGTATCTTATTTATATATAGATA
TATATATGTAATTTATATAAAATATATAGAAATTATTATATATATATATTATACACTCTTCTAT
AATATATATATATATTCACATACATTGGGACTAGAAAAATCTATGGAGATGTCCATCAATGGTA
CTATGTTATTAGAGAAATGCTTTAATTTTCATATTCCAATCAGATGACATCCTATGTTCCACTG
GTTGGGAAGGGGTTGACAACAGTAGTAAGTGCTATACCAAAGCACTTGGATTTGGTCATTCTCT
TCAGAGCTAAGGTTTGCTCCAGGTGGGGCCAACCTACAGCGCAAGAGAAGGGGCTTTGGCTGGG
AGCTTGAGCTTGGAGACTTGACTGAAAGCAGTTGCTGCCCCTGCAGGGCAGCCATTCCTGTGCA
GAAAGAGAGAATGAATGGCTAATGACGCTCCGGATGAAATTGCCTATTGTTCTATGCCGCCTGA
CGTGTCTGCATGAAGGTTTCCTTTTTGTTCATTTTTAAGCTGCTGTTAAACCAAAACCATGTTG
TGCTACTGTGTCAGCCTTTTCATTATTCCAAATTTTACTTTTACTATTTAAGTGAATGCGTAGA
ATCCTATTTGCCAGTGTTCTAAAGGCTTGTGAGGTTCGGAAGGAGCCAGGCCTGGGATACAGCA
GTAACTCCGGCCTGGCCATCCAGTCAACAGAGGGAAAGCAGGGGCTGGTGAGGGCAGAGAGTAC
AAGCTGCGCTCAGTTACTATGCTGGACTTAGCTAGGGGTTCCTTCATGGGGCCACTGACAGGCG
TAGGGACGAGCTTGCCTTCCAGCTCTGTGCTGGGACAGCGGAAGAGCACCAGGCTTGACCAGCC
GTGTAGTGAGTTGAATTTGGGTTCTTTTACTTTGTAACTGCTCCATTTGCCCTACCCCAGCCCC
CTCACCAACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAAAGTAGACTTTAATGCTGTAAATTT
GAGCTGTAGAGCTAAGACTCGCTTACTGGTGAGCTGTGAAATCTTGTTGCTTTTTTCCCAGAGT
CTGATGGCAGTGACTGGTCCAGGTAGTTTTCCTCCCACAGCCAGTGCAGGCAGCAGGTGTGGTC
CAGGCCCTACCCCACCCCACTATGCTCCTTTGAAGCCAACGTGCCTCCCTCACCTCCACACTGG
AGGGATGACGCAGGGGAGAACATAGAATTGCTTGGCCCTCAACTGGGTTAGGACCATTGCAGGT
GACGCAGTGTTGAAGACACTTTAAAGCACTACCAGCCACATTCAGGAACTCTGTTCACAGGTAT
CCTACCAGCACAATGAGGCTAACTGTGACTCGTGGGGCCCAGAGTCAGAAGAAAGAAAAGGCAG
CAGCTTTCCTTTGGGCAGTACACTGGATTGAAGGCAAAGAGGGATAAAGCGACAGATGATTGTG
ACTCTCATGAGGGGGGTGAGCGGAGAGTGTTGATTCTCTGATGGTAACTGACAGGTGTGAACAA
TGCTCAGCCCTCCCTCCCTCCCAGGGAAGAAAAGCAAAGATTCAAAGTAAGCATGATAATAGTT
GGTTTACCAGTGTTCCTTCCAAGGAGACATATATTTTTTAATAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_008773267 ⟹ XP_008771489

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,735 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,859,697 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,596,249 - 70,648,529 (+)	NCBI

Sequence:

show sequence

GGACCCATTGAGCATCTCACTGCAACTCCCTCTTGCAAGCGGGGCGGGGTGGAGTGGCCAGAGG
ACAGCCTGAAATTGACAACACAAGGACACAGGATCGCAGGATCATCCTCTTCAGCTTTCTAATG
GCCCAAATCTCAGCAACCTATACTAGGATCGCCAGTAACCCCAGAGAACAGGGGAGATGTGTCT
GAGCCGGGGGGCGCCTCTGCTTCTGTTTCTTTAAGGAGCCGCTGTTTAGCATTCCTGCTGCTGC
CGCTGCCGCTGCCTGACTCTGCGTTCTGATTGGCTGGAATCAATTGAGAAGGGAGCCAGGGAGA
GATGCTCTTGACTCCACTCAGATCCATCCTGGGGACCTGAGCAGAAGAGGTTCTCGCCGCACCT
AACCCTTGCCTGGGAGCCCGATTCTTCTTTGCCGCTGGGCCTCGGCCCAGAAGCCACAACGGGC
GACACGGAGCCGCCAGTGCTGGAGGGGGAGCCATGGGTGCGGGGCAGCGTGGGGGCAGAGGCCC
CGGGACGCCCGCCGGGCCCCAGGCCCCGCTCCGCCCGGGCACCCCCACGGGTGCCCCCCCCTTC
TTGGTCTGAGCAGTGCGAGTGTGCTAGGGAGCCCAGCGGCGGCGGCGGCGTGGAAACTGGCGTG
GGCTGGGGGGTCCGAGCCGCGGGGGGCAGTGCCATGCACAAGCACCAGCACTGCTGTAAGTGCC
CCGAGTGCTATGAGGTGACCCGCCTGGCCGCCCTGCGGCGCCTCGAGCCTCCTGGCTATGGGGA
CTGGCAGGTGCCGGACCCCTATGGGCCAAGTGGGGGCAATGGGGCCAGCTCCGGTTATGGAGGC
TACAGCTCGCAGACCCTGCCTTCACAGGCAGGGGCTACCCCCACCCCTCGCACCAAGGCCAAGC
TCATCCCCACAGGCCGAGATGTGGGGCCAGTGCCCCCTAAGCCAGTACCCGGCAAGAACACCCC
AAAACTCAACGGCAGTGGCCCCAGCTGGTGGCCCGAGTGCACCTGTACCAATCGGGACTGGTAT
GAGCAGGCCAGCCCTGCACCCCTCCTAGTGAACCCCGAGGCTCTGGAGCCCAGCCTATCGGTGA
ATGGCAGTGATGGCATGTTCAAGTATGAGGAGATAGTCCTGGAGCGGGGCAACTCTGGCCTGGG
CTTCAGTATCGCAGGTGGCATCGACAACCCTCATGTCCCTGATGACCCTGGCATCTTTATTACC
AAGATCATTCCTGGTGGAGCAGCTGCCATGGATGGGAGGCTGGGGGTGAATGACTGTGTGCTAC
GGGTGAATGAGGTGGACGTGTCCGAGGTGGTGCACAGCCGGGCCGTGGAGGCACTGAAGGAGGC
AGGCCCTGTGGTGCGGTTGGTGGTGCGGAGGCGACAGCCCCCACCTGAGACTATCATGGAGGTC
AACCTGCTCAAAGGGCCAAAAGGCCTGGGTTTCAGCATTGCTGGGGGCATTGGTAACCAGCACA
TCCCAGGAGACAACAGCATCTATATCACCAAGATCATTGAAGGAGGAGCTGCTCAGAAAGATGG
ACGCCTACAGATTGGGGACCGGCTTCTTGCGGTGAACAACACCAATCTGCAGGATGTGAGGCAT
GAGGAAGCTGTGGCCTCACTCAAGAACACATCAGACATGGTCTATCTGAAGGTGGCCAAGCCAG
GCAGTCTCCACCTCAACGACATGTATGCTCCCCCCGACTATGCCAGCACTTTCACTGCCTTGGC
TGACAATCATATAAGCCATAATTCCAGCCTGGGTTATCTTGGGGCAGTGGAGAGCAAGGTCACC
TACCCTGCTCCTCCTCAGGTGCCCCCTACTCGTTACTCTCCCATTCCCAGACACATGCTGGCTG
AGGAAGACTTTACCAGAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCTGGGCTT
CAACATTGTAGGAGGAGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGAGGCCCA
GCAGACCTAAGTGGGGAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCAACCTGA
GGAATGCTACCCATGAGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCACCATTGT
GGCCCAGTATAGACCTGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGAGAACAA
ATGATGAACAGCAGCATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGTCCTTGT
ATGTCAGGGCCCTGTTTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGGACTCAG
TTTCTCTTATGGTGACATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAAGCAAGG
CTGGTGACTCCACATGGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGGTTGAAA
AGAAAGAGCGAGCTCGATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGAGTCTAA
TCGGTCGATCAAAACGAAACGTAAAAAGAGTTTTCGCCTCTCTCGAAAGTTTCCATTTTACAAG
AGCAAAGAAAACATGGCCCAGGAGAAGAGCATACAGGAACAAGGACAAGAGGATGCTATTTTGT
CATATGAGCCAGTGACACGACAAGAAATTCATTATGCCAGGCCTGTGATCATCTTGGGCCCAAT
GAAGGACCGAGTCAATGATGACCTCATCTCTGAGTTCCCGCATAAGTTTGGATCCTGCGTGCCA
CATACCACCCGACCTCGGCGTGATAACGAGGTAGATGGACAGGATTACCACTTTGTGGTTTCCC
GGGAACAGATGGAGAAGGATATTCAGGACAACAAGTTCATCGAGGCAGGCCAGTTCAATGATAA
TCTCTACGGGACCAGCATCCAGTCTGTGCGGGCGGTTGCAGAGAGGGGCAAGCACTGCATCTTA
GACGTGTCCGGCAACGCTATAAAGAGACTGCAGCAAGCACAACTTTATCCCATTGCCATTTTCA
TCAAGCCCAAGTCCATCGAAGCACTTATGGAAATGAACCGACGGCAGACATACGAACAAGCAAA
TAAGATCTTTGACAAAGCCATGAAACTGGAGCAAGAATTTGGAGAATACTTTACAGCCATTGTA
CAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAATCATTGAGGACCAGTCTGGGC
ACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAGAATCCCCTCCAACCATTCTCTTGTGAA
CAGAAGAAATCAAGTCCCTCTTCCCTCCTTCCTCTTCATTCCTGTCCCCACGGGGAGAACAAAT
GACTACTGTTCTTGTCCCCCTTTTTAGATATGTCAAAAATTGAGTTTTCTAGTCCTGTTCTTTT
TTAAAAATGTTGTTTGGTTTTGGTTTATTTTTTGGGATGATGCCATCTCACTCATCATGTGACC
GTGCCCATTCCTGCATGGACCTTTCCCGCGCTAGCACAGGTGCAAACCCATCAGAGTTGTTGTT
CTCATAAACACCCAGCAGAAGCGCAGAGAAGAGACGAGGACTGACGGAAAGACAGACTCTGGAC
AACTGCACAGCTTGTGAAGTGAGCGAAACAGCCCACGTGATGAGGTGCCCCTGGGCATTTCTAC
CCTGTACTGCTGGCTTGCAGCTCTGAACAGTGCAACGTAACGGCTACAGAAAGTATCTTATTTA
TATATAGATATATATATGTAATTTATATAAAATATATAGAAATTATTATATATATATATTATAC
ACTCTTCTATAATATATATATATATTCACATACATTGGGACTAGAAAAATCTATGGAGATGTCC
ATCAATGGTACTATGTTATTAGAGAAATGCTTTAATTTTCATATTCCAATCAGATGACATCCTA
TGTTCCACTGGTTGGGAAGGGGTTGACAACAGTAGTAAGTGCTATACCAAAGCACTTGGATTTG
GTCATTCTCTTCAGAGCTAAGGTTTGCTCCAGGTGGGGCCAACCTACAGCGCAAGAGAAGGGGC
TTTGGCTGGGAGCTTGAGCTTGGAGACTTGACTGAAAGCAGTTGCTGCCCCTGCAGGGCAGCCA
TTCCTGTGCAGAAAGAGAGAATGAATGGCTAATGACGCTCCGGATGAAATTGCCTATTGTTCTA
TGCCGCCTGACGTGTCTGCATGAAGGTTTCCTTTTTGTTCATTTTTAAGCTGCTGTTAAACCAA
AACCATGTTGTGCTACTGTGTCAGCCTTTTCATTATTCCAAATTTTACTTTTACTATTTAAGTG
AATGCGTAGAATCCTATTTGCCAGTGTTCTAAAGGCTTGTGAGGTTCGGAAGGAGCCAGGCCTG
GGATACAGCAGTAACTCCGGCCTGGCCATCCAGTCAACAGAGGGAAAGCAGGGGCTGGTGAGGG
CAGAGAGTACAAGCTGCGCTCAGTTACTATGCTGGACTTAGCTAGGGGTTCCTTCATGGGGCCA
CTGACAGGCGTAGGGACGAGCTTGCCTTCCAGCTCTGTGCTGGGACAGCGGAAGAGCACCAGGC
TTGACCAGCCGTGTAGTGAGTTGAATTTGGGTTCTTTTACTTTGTAACTGCTCCATTTGCCCTA
CCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTTTCTTCAAGAAGAAAGTAGACTTTAATG
CTGTAAATTTGAGCTGTAGAGCTAAGACTCGCTTACTGGTGAGCTGTGAAATCTTGTTGCTTTT
TTCCCAGAGTCTGATGGCAGTGACTGGTCCAGGTAGTTTTCCTCCCACAGCCAGTGCAGGCAGC
AGGTGTGGTCCAGGCCCTACCCCACCCCACTATGCTCCTTTGAAGCCAACGTGCCTCCCTCACC
TCCACACTGGAGGGATGACGCAGGGGAGAACATAGAATTGCTTGGCCCTCAACTGGGTTAGGAC
CATTGCAGGTGACGCAGTGTTGAAGACACTTTAAAGCACTACCAGCCACATTCAGGAACTCTGT
TCACAGGTATCCTACCAGCACAATGAGGCTAACTGTGACTCGTGGGGCCCAGAGTCAGAAGAAA
GAAAAGGCAGCAGCTTTCCTTTGGGCAGTACACTGGATTGAAGGCAAAGAGGGATAAAGCGACA
GATGATTGTGACTCTCATGAGGGGGGTGAGCGGAGAGTGTTGATTCTCTGATGGTAACTGACAG
GTGTGAACAATGCTCAGCCCTCCCTCCCTCCCAGGGAAGAAAAGCAAAGATTCAAAGTAAGCAT
GATAATAGTTGGTTTACCAGTGTTCCTTCCAAGGAGACATATATTTTTTAATAAATGATAGTTG
CAATGAA

hide sequence

RefSeq Acc Id:

XM_008773268 ⟹ XP_008771490

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,906,748 - 69,951,928 (+)	NCBI
mRatBN7.2	X	65,866,828 - 65,911,887 (+)	NCBI
Rnor_6.0	X	70,603,436 - 70,648,529 (+)	NCBI

Sequence:

show sequence

GGGTTGGCCGGAGTCAGAGAGGCCGCCAGGCCAGCCCGGGACCGCGGGAGGAAGGGTTCCGCCC
CGTGGTGGTGGCGGCGGGCCGGGGCCGTTGAACTGGTCAGGCCGGCCGGGGTTGCAGGGGGACA
GAGAGCCCCGCAAGATCATCCTGCACAAAGGTTCTACAGGCCTGGGCTTCAACATTGTAGGAGG
AGAGGATGGAGAGGGCATTTTTGTTTCATTCATCCTGGCAGGAGGCCCAGCAGACCTAAGTGGG
GAGTTGCGAAGGGGAGACCGGATCTTATCGGTAAATGGAGTCAACCTGAGGAATGCTACCCATG
AGCAGGCAGCGGCTGCTCTAAAACGGGCTGGCCAATCAGTCACCATTGTGGCCCAGTATAGACC
TGAAGAGTACAGTCGCTTTGAATCCAAGATCCATGACTTGCGAGAACAAATGATGAACAGCAGC
ATGAGCTCGGGGTCCGGGTCTCTCCGAACCAGTGAGAAGAGGTCCTTGTATGTCAGGGCCCTGT
TTGATTATGATCGGACTCGTGACAGCTGCCTACCAAGCCAGGGACTCAGTTTCTCTTATGGTGA
CATTCTACACGTCATTAACGCCTCTGATGATGAGTGGTGGCAAGCAAGGCTGGTGACTCCACAT
GGAGAGAGTGAACAGATTGGTGTGATCCCTAGTAAAAAGAGGGTTGAAAAGAAAGAGCGAGCTC
GATTGAAAACTGTGAAATTCCATGCCAGGACAGGGATGATTGAGTCTAATCGGTCGATCAAAAC
GAAACGTAAAAAGAGTTTTCGCCTCTCTCGAAAGTTTCCATTTTACAAGAGCAAAGAAAACATG
GCCCAGGAGAAGAGCATACAGGAACAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTT
CCAAAGGACAAGAGGATGCTATTTTGTCATATGAGCCAGTGACACGACAAGAAATTCATTATGC
CAGGCCTGTGATCATCTTGGGCCCAATGAAGGACCGAGTCAATGATGACCTCATCTCTGAGTTC
CCGCATAAGTTTGGATCCTGCGTGCCACATACCACCCGACCTCGGCGTGATAACGAGGTAGATG
GACAGGATTACCACTTTGTGGTTTCCCGGGAACAGATGGAGAAGGATATTCAGGACAACAAGTT
CATCGAGGCAGGCCAGTTCAATGATAATCTCTACGGGACCAGCATCCAGTCTGTGCGGGCGGTT
GCAGAGAGGGGCAAGCACTGCATCTTAGACGTGTCCGGCAACGCTATAAAGAGACTGCAGCAAG
CACAACTTTATCCCATTGCCATTTTCATCAAGCCCAAGTCCATCGAAGCACTTATGGAAATGAA
CCGACGGCAGACATACGAACAAGCAAATAAGATCTTTGACAAAGCCATGAAACTGGAGCAAGAA
TTTGGAGAATACTTTACAGCCATTGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCA
AACAAATCATTGAGGACCAGTCTGGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGAAG
AATCCCCTCCAACCATTCTCTTGTGAACAGAAGAAATCAAGTCCCTCTTCCCTCCTTCCTCTTC
ATTCCTGTCCCCACGGGGAGAACAAATGACTACTGTTCTTGTCCCCCTTTTTAGATATGTCAAA
AATTGAGTTTTCTAGTCCTGTTCTTTTTTAAAAATGTTGTTTGGTTTTGGTTTATTTTTTGGGA
TGATGCCATCTCACTCATCATGTGACCGTGCCCATTCCTGCATGGACCTTTCCCGCGCTAGCAC
AGGTGCAAACCCATCAGAGTTGTTGTTCTCATAAACACCCAGCAGAAGCGCAGAGAAGAGACGA
GGACTGACGGAAAGACAGACTCTGGACAACTGCACAGCTTGTGAAGTGAGCGAAACAGCCCACG
TGATGAGGTGCCCCTGGGCATTTCTACCCTGTACTGCTGGCTTGCAGCTCTGAACAGTGCAACG
TAACGGCTACAGAAAGTATCTTATTTATATATAGATATATATATGTAATTTATATAAAATATAT
AGAAATTATTATATATATATATTATACACTCTTCTATAATATATATATATATTCACATACATTG
GGACTAGAAAAATCTATGGAGATGTCCATCAATGGTACTATGTTATTAGAGAAATGCTTTAATT
TTCATATTCCAATCAGATGACATCCTATGTTCCACTGGTTGGGAAGGGGTTGACAACAGTAGTA
AGTGCTATACCAAAGCACTTGGATTTGGTCATTCTCTTCAGAGCTAAGGTTTGCTCCAGGTGGG
GCCAACCTACAGCGCAAGAGAAGGGGCTTTGGCTGGGAGCTTGAGCTTGGAGACTTGACTGAAA
GCAGTTGCTGCCCCTGCAGGGCAGCCATTCCTGTGCAGAAAGAGAGAATGAATGGCTAATGACG
CTCCGGATGAAATTGCCTATTGTTCTATGCCGCCTGACGTGTCTGCATGAAGGTTTCCTTTTTG
TTCATTTTTAAGCTGCTGTTAAACCAAAACCATGTTGTGCTACTGTGTCAGCCTTTTCATTATT
CCAAATTTTACTTTTACTATTTAAGTGAATGCGTAGAATCCTATTTGCCAGTGTTCTAAAGGCT
TGTGAGGTTCGGAAGGAGCCAGGCCTGGGATACAGCAGTAACTCCGGCCTGGCCATCCAGTCAA
CAGAGGGAAAGCAGGGGCTGGTGAGGGCAGAGAGTACAAGCTGCGCTCAGTTACTATGCTGGAC
TTAGCTAGGGGTTCCTTCATGGGGCCACTGACAGGCGTAGGGACGAGCTTGCCTTCCAGCTCTG
TGCTGGGACAGCGGAAGAGCACCAGGCTTGACCAGCCGTGTAGTGAGTTGAATTTGGGTTCTTT
TACTTTGTAACTGCTCCATTTGCCCTACCCCAGCCCCCTCACCAACAGCTGGTAGCTTACTGTT
TCTTCAAGAAGAAAGTAGACTTTAATGCTGTAAATTTGAGCTGTAGAGCTAAGACTCGCTTACT
GGTGAGCTGTGAAATCTTGTTGCTTTTTTCCCAGAGTCTGATGGCAGTGACTGGTCCAGGTAGT
TTTCCTCCCACAGCCAGTGCAGGCAGCAGGTGTGGTCCAGGCCCTACCCCACCCCACTATGCTC
CTTTGAAGCCAACGTGCCTCCCTCACCTCCACACTGGAGGGATGACGCAGGGGAGAACATAGAA
TTGCTTGGCCCTCAACTGGGTTAGGACCATTGCAGGTGACGCAGTGTTGAAGACACTTTAAAGC
ACTACCAGCCACATTCAGGAACTCTGTTCACAGGTATCCTACCAGCACAATGAGGCTAACTGTG
ACTCGTGGGGCCCAGAGTCAGAAGAAAGAAAAGGCAGCAGCTTTCCTTTGGGCAGTACACTGGA
TTGAAGGCAAAGAGGGATAAAGCGACAGATGATTGTGACTCTCATGAGGGGGGTGAGCGGAGAG
TGTTGATTCTCTGATGGTAACTGACAGGTGTGAACAATGCTCAGCCCTCCCTCCCTCCCAGGGA
AGAAAAGCAAAGATTCAAAGTAAGCATGATAATAGTTGGTTTACCAGTGTTCCTTCCAAGGAGA
CATATATTTTTTAATAAATGATAGTTGCAATGAA

hide sequence

RefSeq Acc Id:

XM_063280267 ⟹ XP_063136337

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,740 - 69,951,928 (+)	NCBI

RefSeq Acc Id:

XM_063280268 ⟹ XP_063136338

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,899,694 - 69,945,862 (+)	NCBI

RefSeq Acc Id:

XM_063280269 ⟹ XP_063136339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,907,000 - 69,951,928 (+)	NCBI

RefSeq Acc Id:

XM_063280270 ⟹ XP_063136340

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,909,520 - 69,951,928 (+)	NCBI

RefSeq Acc Id:

XM_063280271 ⟹ XP_063136341

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	69,909,520 - 69,951,928 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_113827	(Get FASTA)	NCBI Sequence Viewer
	XP_006257142	(Get FASTA)	NCBI Sequence Viewer
	XP_006257143	(Get FASTA)	NCBI Sequence Viewer
	XP_006257144	(Get FASTA)	NCBI Sequence Viewer
	XP_006257145	(Get FASTA)	NCBI Sequence Viewer
	XP_006257146	(Get FASTA)	NCBI Sequence Viewer
	XP_006257147	(Get FASTA)	NCBI Sequence Viewer
	XP_008771489	(Get FASTA)	NCBI Sequence Viewer
	XP_008771490	(Get FASTA)	NCBI Sequence Viewer
	XP_063136337	(Get FASTA)	NCBI Sequence Viewer
	XP_063136338	(Get FASTA)	NCBI Sequence Viewer
	XP_063136339	(Get FASTA)	NCBI Sequence Viewer
	XP_063136340	(Get FASTA)	NCBI Sequence Viewer
	XP_063136341	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA93031	(Get FASTA)	NCBI Sequence Viewer
	AAB48561	(Get FASTA)	NCBI Sequence Viewer
	EDL95921	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000003741
	ENSRNOP00000003741.2
	ENSRNOP00000047310
	ENSRNOP00000047310.3
	ENSRNOP00000067983
	ENSRNOP00000067983.1
	ENSRNOP00000071634
	ENSRNOP00000071634.1
	ENSRNOP00000078000
	ENSRNOP00000078000.1
	ENSRNOP00000078849
	ENSRNOP00000078849.1
	ENSRNOP00000087105.1
	ENSRNOP00000096478.1
	ENSRNOP00055042541
	ENSRNOP00060030011
	ENSRNOP00065022535
GenBank Protein	Q62936	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_113827 ⟸ NM_031639

- UniProtKB:

P70547 (UniProtKB/Swiss-Prot), Q62936 (UniProtKB/Swiss-Prot), A6IQ92 (UniProtKB/TrEMBL), A0A8I6A7U5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPSGGNGASSGYGGYSSQTLPSQAG
ATPTPRTKAKLIPTGRDVGPVPPKPVPGKNTPKLNGSGPSWWPECTCTNRDWYEQASPAPLLVN
PEALEPSLSVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMD
GRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGF
SIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS
DMVYLKVAKPGSLHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVTYPAPPQVPPTR
YSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGD
RILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSG
SLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQI
GVIPSKKRVEKKERARLKTVKFHARTGMIESNRDFPGLSDDYYGAKNLKGVTSNTSDSESSSKG
QEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQD
YHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQL
YPIAIFIKPKSIEALMEMNRRQTYEQANKIFDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQI
IEDQSGHYIWVPSPEKL

hide sequence

RefSeq Acc Id:	XP_006257142 ⟸ XM_006257080
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K0Y9 (UniProtKB/TrEMBL), A0A8I5Y1U1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPSGGNGASSGYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKNTPKLNGSGPSWWPECTCTNRDWYEQASPAPLLVN PEALEPSLSVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMD GRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGF SIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS DMVYLKVAKPGSLHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVTYPAPPQVPPTR YSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGD RILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSG SLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQI GVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQEKSI QEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGS CVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKH CILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIFDKAMKLEQEFGEYFT AIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:	XP_006257143 ⟸ XM_006257081
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5Y1U1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPSGGNGASSGYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKNTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFK YEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS EVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIY ITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSLHLNDM YAPPDYASTFTALADNHISHNSSLGYLGAVESKVTYPAPPQVPPTRYSPIPRHMLAEEDFTREP RKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQA AAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDY DRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLK TVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQEKSIQEQGVTSNTSDSESSSKG QEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQD YHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQL YPIAIFIKPKSIEALMEMNRRQTYEQANKIFDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQI IEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:	XP_006257144 ⟸ XM_006257082
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A7U5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPSGGNGASSGYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKNTPKLNGSGPSWWPECTCTNRDWYEQASPAPLLVN PEALEPSLSVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMD GRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGF SIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS DMVYLKVAKPGSLHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVTYPAPPQVPPTR YSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGD RILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSG SLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQI GVIPSKKRVEKKERARLKTVKFHARTGMIESNRDFPGLSDDYYGAKNLKGQEDAILSYEPVTRQ EIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDI QDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEA LMEMNRRQTYEQANKIFDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSP EKL hide sequence

RefSeq Acc Id:	XP_006257145 ⟸ XM_006257083
- Peptide Label:	isoform X6
- UniProtKB:	A0A096MJ42 (UniProtKB/TrEMBL), A0A8I6ATE5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPSGGNGASSGYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKNTPKLNGSGPSWWPECTCTNRDWYEQVNGSDGMFK YEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVS EVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIY ITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKPGSLHLNDM YAPPDYASTFTALADNHISHNSSLGYLGAVESKVTYPAPPQVPPTRYSPIPRHMLAEEDFTREP RKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQA AAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDY DRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLK TVKFHARTGMIESNRDFPGLSDDYYGAKNLKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRV NDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGT SIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIFD KAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:	XP_006257146 ⟸ XM_006257084
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZLU7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERARKFSGSSLALGLGSASASAWRRASQRWAWPLRSLRPGGEAREPRKIILHKGSTGLGFNIV GGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQY RPEEYSRFESKIHDLREQMMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSY GDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSI KTKRKKSFRLSRKFPFYKSKENMAQEKSIQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIH YARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDN KFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALME MNRRQTYEQANKIFDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:

XP_006257147 ⟸ XM_006257085

- Peptide Label:

isoform X10

- Sequence:

show sequence

MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQAR
LVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYK
SKENMAQEKSIQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDD
LISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQ
SVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIFDKAM
KLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL

hide sequence

RefSeq Acc Id:	XP_008771489 ⟸ XM_008773267
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5Y1U1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHKHQHCCKCPECYEVTRLAALRRLEPPGYGDWQVPDPYGPSGGNGASSGYGGYSSQTLPSQAG ATPTPRTKAKLIPTGRDVGPVPPKPVPGKNTPKLNGSGPSWWPECTCTNRDWYEQASPAPLLVN PEALEPSLSVNGSDGMFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMD GRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQPPPETIMEVNLLKGPKGLGF SIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS DMVYLKVAKPGSLHLNDMYAPPDYASTFTALADNHISHNSSLGYLGAVESKVTYPAPPQVPPTR YSPIPRHMLAEEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGD RILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRPEEYSRFESKIHDLREQMMNSSMSSGSG SLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQI GVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQEKSI QEQGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEV DGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQ QAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIFDKAMKLEQEFGEYFTAIVQGDSLEEIYNK IKQIIEDQSGHYIWVPSPEKL hide sequence

RefSeq Acc Id:

XP_008771490 ⟸ XM_008773268

- Peptide Label:

isoform X10

- Sequence:

show sequence

MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQAR
LVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYK
SKENMAQEKSIQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDD
LISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQ
SVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIFDKAM
KLEQEFGEYFTAIVQGDSLEEIYNKIKQIIEDQSGHYIWVPSPEKL

hide sequence

RefSeq Acc Id:

ENSRNOP00000047310 ⟸ ENSRNOT00000045082

RefSeq Acc Id:

ENSRNOP00000071634 ⟸ ENSRNOT00000088114

RefSeq Acc Id:

ENSRNOP00000067983 ⟸ ENSRNOT00000076079

RefSeq Acc Id:

ENSRNOP00000003741 ⟸ ENSRNOT00000003741

RefSeq Acc Id:

ENSRNOP00000068233 ⟸ ENSRNOT00000076456

RefSeq Acc Id:

ENSRNOP00000096478 ⟸ ENSRNOT00000099103

RefSeq Acc Id:

ENSRNOP00000087105 ⟸ ENSRNOT00000105108

RefSeq Acc Id:	XP_063136338 ⟸ XM_063280268
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063136337 ⟸ XM_063280267
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063136339 ⟸ XM_063280269
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063136340 ⟸ XM_063280270
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063136341 ⟸ XM_063280271
- Peptide Label:	isoform X12

Protein Domains

Guanylate kinase-like PDZ SH3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q62936-F1-model_v2	AlphaFold	Q62936	1-849	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701870

Promoter ID:

EPDNEW_R12392

Type:

multiple initiation site

Name:

Dlg3_1

Description:

discs large MAGUK scaffold protein 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	70,596,588 - 70,596,648	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:68423	AgrOrtholog
BioCyc Gene	G2FUF-2122	BioCyc
Ensembl Genes	ENSRNOG00000002767	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00055029646	UniProtKB/Swiss-Prot
	ENSRNOG00060020593	UniProtKB/Swiss-Prot
	ENSRNOG00065016962	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000003741	ENTREZGENE
	ENSRNOT00000003741.7	UniProtKB/Swiss-Prot
	ENSRNOT00000045082.7	UniProtKB/Swiss-Prot
	ENSRNOT00000076079.3	UniProtKB/TrEMBL
	ENSRNOT00000076450.3	UniProtKB/TrEMBL
	ENSRNOT00000076503.3	UniProtKB/TrEMBL
	ENSRNOT00000088114.2	UniProtKB/TrEMBL
	ENSRNOT00000099103.1	UniProtKB/TrEMBL
	ENSRNOT00000105108.1	UniProtKB/TrEMBL
	ENSRNOT00055051598	UniProtKB/Swiss-Prot
	ENSRNOT00060036469	UniProtKB/Swiss-Prot
	ENSRNOT00065028480	UniProtKB/Swiss-Prot
Gene3D-CATH	2.30.42.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate Kinase phosphate binding domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	DLG1-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DLG1_PEST_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DLG3_SH3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GK/Ca_channel_bsu	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate_kin-like_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate_kinase_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ_assoc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:58948	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	58948	ENTREZGENE
PANTHER	DISCS LARGE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DISKS LARGE HOMOLOG 3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Guanylate_kin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MAGUK_N_PEST	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ_assoc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Dlg3	PhenoGen
PIRSF	MAGUK_DLGH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	GUANYLATE_KINASE_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GUANYLATE_KINASE_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000002767	RatGTEx
	ENSRNOG00055029646	RatGTEx
	ENSRNOG00060020593	RatGTEx
	ENSRNOG00065016962	RatGTEx
SMART	GuKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MAGUK_N_PEST	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF50044	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF50156	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR	TC218155
UniProt	A0A096MJ42	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K0Y9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y1U1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZLU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A7U5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ATE5	ENTREZGENE, UniProtKB/TrEMBL
	A6IQ92	ENTREZGENE, UniProtKB/TrEMBL
	DLG3_RAT	UniProtKB/Swiss-Prot
	P70547	ENTREZGENE
	Q62936	ENTREZGENE
UniProt Secondary	P70547	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-06-01	Dlg3	discs large MAGUK scaffold protein 3	Dlg3	discs large homolog 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-01-27	Dlg3	discs large homolog 3	Dlg3	discs, large homolog 3 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-18	Dlg3	discs, large homolog 3 (Drosophila)	Dlgh3	discs, large homolog 3 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-06-10	Dlgh3	discs, large homolog 3 (Drosophila)			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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