Arpp21 (cAMP regulated phosphoprotein 21) - Rat Genome Database

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Gene: Arpp21 (cAMP regulated phosphoprotein 21) Rattus norvegicus
Analyze
Symbol: Arpp21
Name: cAMP regulated phosphoprotein 21
RGD ID: 1593239
Description: Predicted to enable nucleic acid binding activity. Predicted to act upstream of or within cellular response to heat. Predicted to be active in cytoplasm. Orthologous to human ARPP21 (cAMP regulated phosphoprotein 21); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Arpp-21; cAMP-regulated phosphoprotein (21 kDa); cAMP-regulated phosphoprotein 21; cyclic AMP-regulated phosphoprotein; cyclic AMP-regulated phosphoprotein 21; cyclic AMP-regulated phosphoprotein, 21; LOC102553309; LOC360675; LOC363153; MGC109368; Ppp1r1c; Ppp1r1cl; protein phosphatase 1, regulatory (inhibitory subunit 1C); protein phosphatase 1, regulatory subunit 1C; protein phosphatase 1, regulatory subunit 1C-like; RGD1307208; RGD1307215; similar to B930044J06 protein ; similar to cyclic AMP-regulated phosphoprotein, 21 isoform 2; uncharacterized LOC102553309
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88120,912,964 - 121,077,586 (-)NCBIGRCr8
mRatBN7.28112,034,636 - 112,199,273 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8112,034,642 - 112,194,297 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8117,647,674 - 117,766,644 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08115,846,974 - 115,965,944 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08113,689,782 - 113,808,767 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08120,323,895 - 120,492,790 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8120,323,897 - 120,446,507 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08119,663,712 - 119,832,028 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48116,674,803 - 116,794,799 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18116,809,093 - 116,814,254 (-)NCBI
Celera8111,310,307 - 111,428,734 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1940913   PMID:2540203   PMID:12477932   PMID:15632090   PMID:16875859   PMID:18755693   PMID:19103603   PMID:29581509  


Genomics

Comparative Map Data
Arpp21
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88120,912,964 - 121,077,586 (-)NCBIGRCr8
mRatBN7.28112,034,636 - 112,199,273 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8112,034,642 - 112,194,297 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8117,647,674 - 117,766,644 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08115,846,974 - 115,965,944 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08113,689,782 - 113,808,767 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08120,323,895 - 120,492,790 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8120,323,897 - 120,446,507 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08119,663,712 - 119,832,028 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48116,674,803 - 116,794,799 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18116,809,093 - 116,814,254 (-)NCBI
Celera8111,310,307 - 111,428,734 (-)NCBICelera
Cytogenetic Map8q32NCBI
ARPP21
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38335,638,853 - 35,794,486 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl335,638,945 - 35,794,496 (+)EnsemblGRCh38hg38GRCh38
GRCh37335,680,345 - 35,835,978 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36335,658,853 - 35,810,992 (+)NCBINCBI36Build 36hg18NCBI36
Celera335,625,833 - 35,777,956 (+)NCBICelera
Cytogenetic Map3p22.3NCBI
HuRef335,621,751 - 35,777,104 (+)NCBIHuRef
CHM1_1335,630,728 - 35,786,025 (+)NCBICHM1_1
T2T-CHM13v2.0335,639,532 - 35,795,160 (+)NCBIT2T-CHM13v2.0
Arpp21
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399111,894,159 - 112,065,356 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9111,894,159 - 112,065,006 (-)EnsemblGRCm39 Ensembl
GRCm389112,065,091 - 112,236,288 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9112,065,091 - 112,235,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv379111,967,595 - 112,137,345 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369111,910,149 - 112,032,806 (-)NCBIMGSCv36mm8
Celera9111,791,461 - 111,962,061 (-)NCBICelera
Cytogenetic Map9F3NCBI
cM Map962.46NCBI
Arpp21
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554212,682,413 - 2,839,245 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554212,681,759 - 2,838,014 (+)NCBIChiLan1.0ChiLan1.0
ARPP21
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2235,613,453 - 35,770,649 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1335,618,224 - 35,775,416 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0335,558,119 - 35,715,157 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1335,851,537 - 36,008,599 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl335,852,051 - 36,008,061 (+)Ensemblpanpan1.1panPan2
ARPP21
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1235,722,575 - 5,876,923 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl235,722,727 - 5,876,487 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha235,761,651 - 5,917,334 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0236,001,149 - 6,156,692 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl236,001,177 - 6,156,665 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1235,864,018 - 5,977,322 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0235,968,518 - 6,124,163 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0235,956,227 - 6,111,899 (+)NCBIUU_Cfam_GSD_1.0
Arpp21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118192,336,169 - 192,486,517 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647325,474,728 - 25,625,095 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647325,475,845 - 25,625,095 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARPP21
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1320,934,846 - 21,088,420 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11320,955,414 - 21,088,424 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21322,754,689 - 22,908,209 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARPP21
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11580,048,078 - 80,204,843 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1580,089,657 - 80,204,314 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604153,520,682 - 53,678,746 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arpp21
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478813,656,352 - 13,767,654 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478813,613,751 - 13,766,633 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Arpp21
1268 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:628
Count of miRNA genes:268
Interacting mature miRNAs:340
Transcripts:ENSRNOT00000037199, ENSRNOT00000042854
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088626Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)870513503118219066Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)871888757116888757Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)871888757116888757Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)876468691121468691Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)882460758122812818Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)889265192114019816Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)893535351123900184Rat
1358893Bp263Blood pressure QTL 2635.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
738014Anxrr15Anxiety related response QTL 153.60.005locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)895718998123900184Rat
2300182Bmd56Bone mineral density QTL 565.4femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)895718998123900184Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8100149864120994388Rat

Markers in Region
D8Rat201  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28112,087,746 - 112,087,983 (+)MAPPERmRatBN7.2
Rnor_6.08120,381,225 - 120,381,461NCBIRnor6.0
Rnor_5.08119,720,465 - 119,720,701UniSTSRnor5.0
RGSC_v3.48116,729,516 - 116,729,753RGDRGSC3.4
RGSC_v3.48116,729,517 - 116,729,753UniSTSRGSC3.4
RGSC_v3.18116,748,972 - 116,749,208RGD
Celera8111,363,817 - 111,364,053UniSTS
RH 3.4 Map81192.1RGD
RH 3.4 Map81192.1UniSTS
RH 2.0 Map8948.6RGD
SHRSP x BN Map871.8999RGD
Cytogenetic Map8q32UniSTS
D9Bwg1012e  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28112,034,646 - 112,034,895 (+)MAPPERmRatBN7.2
Rnor_6.08120,323,906 - 120,324,154NCBIRnor6.0
Rnor_5.08119,663,723 - 119,663,971UniSTSRnor5.0
RGSC_v3.48116,674,808 - 116,675,056UniSTSRGSC3.4
Celera8111,310,312 - 111,310,560UniSTS
Cytogenetic Map8q32UniSTS
BE121039  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28112,147,791 - 112,147,993 (+)MAPPERmRatBN7.2
Rnor_6.08120,441,268 - 120,441,469NCBIRnor6.0
Rnor_5.08119,780,508 - 119,780,709UniSTSRnor5.0
RGSC_v3.48116,789,560 - 116,789,761UniSTSRGSC3.4
Celera8111,423,495 - 111,423,696UniSTS
RH 3.4 Map81192.99UniSTS
Cytogenetic Map8q32UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 8 8 2 3 58 2
Low 2 10 21 13 11 13 6 8 10 19 22 11 6
Below cutoff 1 33 27 27 27 6 16 16

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001135045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001135046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC089974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S65091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000037199   ⟹   ENSRNOP00000033306
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8112,146,485 - 112,194,297 (-)Ensembl
Rnor_6.0 Ensembl8120,439,994 - 120,446,507 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000042854   ⟹   ENSRNOP00000039268
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8112,034,642 - 112,153,031 (-)Ensembl
Rnor_6.0 Ensembl8120,323,901 - 120,446,507 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000085161   ⟹   ENSRNOP00000069661
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8112,034,642 - 112,153,031 (-)Ensembl
Rnor_6.0 Ensembl8120,323,897 - 120,446,455 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000100209   ⟹   ENSRNOP00000087306
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8112,034,642 - 112,153,031 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000100319   ⟹   ENSRNOP00000083589
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8112,034,642 - 112,153,031 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000110000   ⟹   ENSRNOP00000077999
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8112,127,768 - 112,153,031 (-)Ensembl
RefSeq Acc Id: NM_001135045   ⟹   NP_001128517
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,970 - 121,031,357 (-)NCBI
mRatBN7.28112,034,642 - 112,153,031 (-)NCBI
Rnor_6.08120,323,901 - 120,446,507 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
RGSC_v3.48116,674,803 - 116,794,799 (-)RGD
Celera8111,310,307 - 111,428,734 (-)RGD
Sequence:
RefSeq Acc Id: NM_001135046   ⟹   NP_001128518
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,024,822 - 121,031,357 (-)NCBI
mRatBN7.28112,146,496 - 112,153,031 (-)NCBI
Rnor_6.08120,439,972 - 120,446,507 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
RGSC_v3.48116,674,803 - 116,794,799 (-)RGD
Celera8111,422,199 - 111,428,734 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243972   ⟹   XP_006244034
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243973   ⟹   XP_006244035
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,479 (-)NCBI
mRatBN7.28112,034,636 - 112,153,161 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243974   ⟹   XP_006244036
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,076,646 (-)NCBI
mRatBN7.28112,034,636 - 112,198,279 (-)NCBI
Rnor_6.08120,323,895 - 120,491,830 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243975   ⟹   XP_006244037
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,077,586 (-)NCBI
mRatBN7.28112,034,636 - 112,199,273 (-)NCBI
Rnor_6.08120,323,895 - 120,492,790 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243976   ⟹   XP_006244038
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,485 (-)NCBI
mRatBN7.28112,034,636 - 112,153,186 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243977   ⟹   XP_006244039
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,036,105 (-)NCBI
mRatBN7.28112,034,636 - 112,157,606 (-)NCBI
Rnor_6.08120,323,895 - 120,451,040 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243980   ⟹   XP_006244042
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,075,495 (-)NCBI
mRatBN7.28112,034,636 - 112,197,199 (-)NCBI
Rnor_6.08120,323,895 - 120,491,184 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006243982   ⟹   XP_006244044
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,030,066 (-)NCBI
mRatBN7.28112,034,636 - 112,151,717 (-)NCBI
Rnor_6.08120,323,895 - 120,445,283 (-)NCBI
Rnor_5.08119,663,712 - 119,832,028 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595750   ⟹   XP_017451239
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,075,274 (-)NCBI
mRatBN7.28112,034,636 - 112,196,899 (-)NCBI
Rnor_6.08120,323,895 - 120,490,501 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595751   ⟹   XP_017451240
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,076,646 (-)NCBI
mRatBN7.28112,034,636 - 112,196,394 (-)NCBI
Rnor_6.08120,323,895 - 120,489,970 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595752   ⟹   XP_017451241
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595753   ⟹   XP_017451242
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595754   ⟹   XP_017451243
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595755   ⟹   XP_017451244
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595756   ⟹   XP_017451245
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595757   ⟹   XP_017451246
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595758   ⟹   XP_017451247
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595760   ⟹   XP_017451249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
Rnor_6.08120,323,895 - 120,446,764 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595766   ⟹   XP_017451255
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,001,984 - 121,031,514 (-)NCBI
mRatBN7.28112,123,658 - 112,153,187 (-)NCBI
Rnor_6.08120,408,844 - 120,446,758 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595769   ⟹   XP_017451258
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,024,822 - 121,031,514 (-)NCBI
mRatBN7.28112,146,496 - 112,153,185 (-)NCBI
Rnor_6.08120,439,975 - 120,446,752 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039081801   ⟹   XP_038937729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,077,586 (-)NCBI
mRatBN7.28112,034,636 - 112,199,273 (-)NCBI
RefSeq Acc Id: XM_039081802   ⟹   XP_038937730
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,073,980 (-)NCBI
mRatBN7.28112,034,636 - 112,195,661 (-)NCBI
RefSeq Acc Id: XM_039081803   ⟹   XP_038937731
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
RefSeq Acc Id: XM_039081804   ⟹   XP_038937732
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
RefSeq Acc Id: XM_039081805   ⟹   XP_038937733
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,031,514 (-)NCBI
mRatBN7.28112,034,636 - 112,153,188 (-)NCBI
RefSeq Acc Id: XM_039081806   ⟹   XP_038937734
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,001,991 (-)NCBI
mRatBN7.28112,034,636 - 112,123,665 (-)NCBI
RefSeq Acc Id: XM_039081807   ⟹   XP_038937735
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,024,822 - 121,031,509 (-)NCBI
mRatBN7.28112,146,496 - 112,153,140 (-)NCBI
RefSeq Acc Id: XM_063265839   ⟹   XP_063121909
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,071,271 (-)NCBI
RefSeq Acc Id: XM_063265840   ⟹   XP_063121910
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,076,646 (-)NCBI
RefSeq Acc Id: XM_063265841   ⟹   XP_063121911
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88120,912,964 - 121,075,274 (-)NCBI
RefSeq Acc Id: XM_063265842   ⟹   XP_063121912
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,024,822 - 121,031,471 (-)NCBI
RefSeq Acc Id: XM_063265843   ⟹   XP_063121913
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,024,822 - 121,076,646 (-)NCBI
RefSeq Acc Id: XM_063265844   ⟹   XP_063121914
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88121,024,822 - 121,075,274 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001128517 (Get FASTA)   NCBI Sequence Viewer  
  NP_001128518 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244034 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244035 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244036 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244037 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244038 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244039 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244042 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244044 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451239 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451240 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451241 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451242 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451243 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451244 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451245 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451246 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451247 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451249 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451255 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451258 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937729 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937730 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937731 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937732 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937733 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937734 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937735 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121909 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121910 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121911 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121912 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121913 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121914 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH89974 (Get FASTA)   NCBI Sequence Viewer  
  EDL77017 (Get FASTA)   NCBI Sequence Viewer  
  EDL77018 (Get FASTA)   NCBI Sequence Viewer  
  EDL77019 (Get FASTA)   NCBI Sequence Viewer  
  EDL77020 (Get FASTA)   NCBI Sequence Viewer  
  EDL77021 (Get FASTA)   NCBI Sequence Viewer  
  EDL77022 (Get FASTA)   NCBI Sequence Viewer  
  EDL77023 (Get FASTA)   NCBI Sequence Viewer  
  EDL77024 (Get FASTA)   NCBI Sequence Viewer  
  EDL77025 (Get FASTA)   NCBI Sequence Viewer  
  EDL77026 (Get FASTA)   NCBI Sequence Viewer  
  EDL77027 (Get FASTA)   NCBI Sequence Viewer  
  EDL77028 (Get FASTA)   NCBI Sequence Viewer  
  EDL77029 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000033306
  ENSRNOP00000033306.3
  ENSRNOP00000039268
  ENSRNOP00000039268.2
  ENSRNOP00000069661
  ENSRNOP00000069661.1
  ENSRNOP00000077999.1
  ENSRNOP00000083589
  ENSRNOP00000083589.1
  ENSRNOP00000087306
  ENSRNOP00000087306.1
Reference Protein Sequences
RefSeq Acc Id: NP_001128517   ⟸   NM_001135045
- Peptide Label: isoform 2
- UniProtKB: D3ZQR3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001128518   ⟸   NM_001135046
- Peptide Label: isoform 1
- UniProtKB: Q5FVI0 (UniProtKB/TrEMBL),   A6I3K4 (UniProtKB/TrEMBL),   A6I3K8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244037   ⟸   XM_006243975
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244036   ⟸   XM_006243974
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244042   ⟸   XM_006243980
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244039   ⟸   XM_006243977
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244038   ⟸   XM_006243976
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244035   ⟸   XM_006243973
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244034   ⟸   XM_006243972
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006244044   ⟸   XM_006243982
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017451239   ⟸   XM_017595750
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017451240   ⟸   XM_017595751
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017451247   ⟸   XM_017595758
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017451245   ⟸   XM_017595756
- Peptide Label: isoform X7
- UniProtKB: A0A8I6A885 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451243   ⟸   XM_017595754
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017451241   ⟸   XM_017595752
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JVX9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451244   ⟸   XM_017595755
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017451242   ⟸   XM_017595753
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017451246   ⟸   XM_017595757
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017451249   ⟸   XM_017595760
- Peptide Label: isoform X10
- UniProtKB: A0A8I5ZX87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451255   ⟸   XM_017595766
- Peptide Label: isoform X14
- UniProtKB: A0A8I5ZKF3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451258   ⟸   XM_017595769
- Peptide Label: isoform X15
- UniProtKB: Q5FVI0 (UniProtKB/TrEMBL),   A6I3K4 (UniProtKB/TrEMBL),   A6I3K8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069661   ⟸   ENSRNOT00000085161
RefSeq Acc Id: ENSRNOP00000039268   ⟸   ENSRNOT00000042854
RefSeq Acc Id: ENSRNOP00000033306   ⟸   ENSRNOT00000037199
RefSeq Acc Id: XP_038937729   ⟸   XM_039081801
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038937730   ⟸   XM_039081802
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038937733   ⟸   XM_039081805
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038937732   ⟸   XM_039081804
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038937731   ⟸   XM_039081803
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038937734   ⟸   XM_039081806
- Peptide Label: isoform X13
- UniProtKB: A6I3J9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937735   ⟸   XM_039081807
- Peptide Label: isoform X15
- UniProtKB: Q5FVI0 (UniProtKB/TrEMBL),   A6I3K4 (UniProtKB/TrEMBL),   A6I3K8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000077999   ⟸   ENSRNOT00000110000
RefSeq Acc Id: ENSRNOP00000083589   ⟸   ENSRNOT00000100319
RefSeq Acc Id: ENSRNOP00000087306   ⟸   ENSRNOT00000100209
RefSeq Acc Id: XP_063121910   ⟸   XM_063265840
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063121911   ⟸   XM_063265841
- Peptide Label: isoform X10
- UniProtKB: A0A8I5ZX87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121909   ⟸   XM_063265839
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063121913   ⟸   XM_063265843
- Peptide Label: isoform X15
- UniProtKB: A6I3K4 (UniProtKB/TrEMBL),   A6I3K8 (UniProtKB/TrEMBL),   Q5FVI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121914   ⟸   XM_063265844
- Peptide Label: isoform X15
- UniProtKB: A6I3K4 (UniProtKB/TrEMBL),   A6I3K8 (UniProtKB/TrEMBL),   Q5FVI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121912   ⟸   XM_063265842
- Peptide Label: isoform X15
- UniProtKB: A6I3K4 (UniProtKB/TrEMBL),   A6I3K8 (UniProtKB/TrEMBL),   Q5FVI0 (UniProtKB/TrEMBL)
Protein Domains
R3H   SUZ

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JVX9-F1-model_v2 AlphaFold A0A0G2JVX9 1-843 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1593239 AgrOrtholog
BioCyc Gene G2FUF-29012 BioCyc
Ensembl Genes ENSRNOG00000008919 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000037199 ENTREZGENE
  ENSRNOT00000037199.6 UniProtKB/TrEMBL
  ENSRNOT00000042854 ENTREZGENE
  ENSRNOT00000042854.5 UniProtKB/TrEMBL
  ENSRNOT00000085161 ENTREZGENE
  ENSRNOT00000085161.2 UniProtKB/TrEMBL
  ENSRNOT00000100209 ENTREZGENE
  ENSRNOT00000100209.1 UniProtKB/TrEMBL
  ENSRNOT00000100319 ENTREZGENE
  ENSRNOT00000100319.1 UniProtKB/TrEMBL
  ENSRNOT00000110000.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.50 UniProtKB/TrEMBL
InterPro R3H_dom_sf UniProtKB/TrEMBL
  R3H_ss-bd UniProtKB/TrEMBL
  SUZ UniProtKB/TrEMBL
KEGG Report rno:363153 UniProtKB/TrEMBL
NCBI Gene 363153 ENTREZGENE
PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 UniProtKB/TrEMBL
  CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam R3H UniProtKB/TrEMBL
  SUZ UniProtKB/TrEMBL
PhenoGen Arpp21 PhenoGen
PROSITE R3H UniProtKB/TrEMBL
  SUZ UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008919 RatGTEx
SMART R3H UniProtKB/TrEMBL
Superfamily-SCOP SSF82708 UniProtKB/TrEMBL
UniProt A0A0G2JVX9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZKF3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZX87 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A885 ENTREZGENE, UniProtKB/TrEMBL
  A6I3J9 ENTREZGENE, UniProtKB/TrEMBL
  A6I3K4 ENTREZGENE, UniProtKB/TrEMBL
  A6I3K8 ENTREZGENE, UniProtKB/TrEMBL
  D3ZQR3 ENTREZGENE, UniProtKB/TrEMBL
  Q5FVI0 ENTREZGENE
UniProt Secondary Q5FVI0 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-25 Arpp21  cAMP regulated phosphoprotein 21  Arpp21  cAMP-regulated phosphoprotein 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-07-29 Arpp21  cAMP-regulated phosphoprotein 21  LOC102553309  uncharacterized LOC102553309  Data merged from RGD:7539590 737654 PROVISIONAL
2013-12-17 LOC102553309  uncharacterized LOC102553309      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-05-24 Arpp21  cAMP-regulated phosphoprotein 21  RGD1307215  similar to protein phosphatase 1, regulatory (inhibitory) subunit 1C; thymocyte ARPP; DNA segment, Chr 9, Brigham & Womens Genetics 1012 expressed  Data merged from RGD:1307215 1643240 APPROVED
2011-01-20 Arpp21  cAMP-regulated phosphoprotein 21  Arpp-21  cyclic AMP-regulated phosphoprotein 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2009-06-15 Arpp-21  cyclic AMP-regulated phosphoprotein  RGD1307208  similar to B930044J06 protein   Data merged from RGD:1307208 737654 PROVISIONAL
2008-09-25 Arpp-21  cyclic AMP-regulated phosphoprotein  Arpp21  cyclic AMP-regulated phosphoprotein, 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-18 Arpp21  cyclic AMP-regulated phosphoprotein, 21  Ppp1r1cl  protein phosphatase 1, regulatory subunit 1C-like  Data merged from RGD:3379 737654 APPROVED
2008-04-30 RGD1307208  similar to B930044J06 protein   RGD1307208_predicted  similar to B930044J06 protein (predicted)  'predicted' is removed 2292626 APPROVED
2008-03-18 Ppp1r1cl  protein phosphatase 1, regulatory subunit 1C-like  Ppp1r1c  protein phosphatase 1, regulatory subunit 1C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Arpp21  cyclic AMP-regulated phosphoprotein, 21  LOC363153  similar to cyclic AMP-regulated phosphoprotein, 21 isoform 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC363153  similar to cyclic AMP-regulated phosphoprotein, 21 isoform 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-12-06 RGD1307215  similar to protein phosphatase 1, regulatory (inhibitory) subunit 1C; thymocyte ARPP; DNA segment, Chr 9, Brigham & Womens Genetics 1012 expressed  RGD1307215_predicted  similar to protein phosphatase 1, regulatory (inhibitory) subunit 1C; thymocyte ARPP; DNA segment, Chr 9, Brigham & Womens Genetics 1012 expressed (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1307208_predicted  similar to B930044J06 protein (predicted)  LOC360675_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-20 RGD1307215_predicted  similar to protein phosphatase 1, regulatory (inhibitory) subunit 1C; thymocyte ARPP; DNA segment, Chr 9, Brigham & Womens Genetics 1012 expressed (predicted)  LOC363154_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360675_predicted  similar to B930044J06 protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 LOC363154_predicted  similar to protein phosphatase 1, regulatory (inhibitory) subunit 1C; thymocyte ARPP; DNA segment, Chr 9, Brigham & Womens Genetics 1012 expressed (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL
2003-04-09 Ppp1r1c  protein phosphatase 1, regulatory subunit 1C    protein phosphatase 1, regulatory (inhibitory subunit 1C)  Name updated 629478 APPROVED
2001-10-23 Ppp1r1c  protein phosphatase 1, regulatory (inhibitory subunit 1C)      Name updated to reflect Human and Mouse nomenclature 68913 APPROVED