Pet100 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 12 | 6,477,703 - 6,480,435 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 12 | 1,679,805 - 1,682,540 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 12 | 1,679,859 - 1,682,540 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 12 | 2,346,471 - 2,349,136 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 12 | 2,970,043 - 2,972,709 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 12 | 1,741,020 - 1,743,669 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 12 | 2,170,630 - 2,173,259 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 12 | 2,170,630 - 2,173,251 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 12 | 4,332,962 - 4,335,591 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 12 | 2,531,225 - 2,533,448 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 12 | 3,535,650 - 3,538,316 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12 | NCBI | | | | |
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PET100 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 19 | 7,629,793 - 7,631,956 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 7,629,788 - 7,631,956 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 7,694,679 - 7,696,842 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 7,600,677 - 7,602,961 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 19 | 7,565,855 - 7,567,694 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.2 | NCBI | | | | | HuRef | 19 | 7,364,339 - 7,366,226 (+) | NCBI | | HuRef | | | CHM1_1 | 19 | 7,694,422 - 7,696,261 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 7,630,676 - 7,632,839 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Pet100 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 8 | 3,671,551 - 3,674,235 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 3,671,548 - 3,675,848 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 3,621,551 - 3,624,235 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 3,621,548 - 3,625,848 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 3,621,554 - 3,625,606 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | Celera | 8 | 3,851,883 - 3,855,935 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | A1.1 | NCBI | | | | | cM Map | 8 | 1.92 | NCBI | | | | |
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Pet100 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955563 | 1,628,746 - 1,630,307 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955563 | 1,628,746 - 1,630,307 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100983712 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 20 | 12,300,612 - 12,302,502 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 11,418,199 - 11,420,091 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 6,919,469 - 6,921,359 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 7,774,461 - 7,776,340 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
LOC611528 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 20 | 52,406,154 - 52,412,552 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 52,210,235 - 52,211,785 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 52,935,464 - 52,937,014 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 52,935,565 - 52,937,263 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 52,139,263 - 52,140,813 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 52,582,852 - 52,584,402 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 52,813,857 - 52,815,407 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LOC101966343 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 213,153,223 - 213,154,750 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936588 | 4,680,102 - 4,681,563 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936588 | 4,680,083 - 4,681,563 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PET100 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 71,519,392 - 71,520,886 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 71,519,395 - 71,520,820 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 71,911,816 - 71,913,241 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
LOC103233807 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 6 | 7,116,233 - 7,118,101 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 7,116,314 - 7,118,030 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666081 | 743,504 - 745,391 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pet100 (Heterocephalus glaber - naked mole-rat) |
|