Gene: Ankrd33b (ankyrin repeat domain 33B) Rattus norvegicus
Analyze
Symbol:
Ankrd33b
Name:
ankyrin repeat domain 33B
RGD ID:
1564227
Description:
Orthologous to human ANKRD33B (ankyrin repeat domain 33B); INTERACTS WITH 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil; acetamide.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
ankyrin repeat domain-containing protein 33B; LOC310200; RGD1564227; similar to RIKEN cDNA 5730557B15
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 83,988,505 - 84,070,311 (-) NCBI GRCr8 mRatBN7.2 2 82,277,604 - 82,359,420 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 82,283,108 - 82,358,872 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 89,323,286 - 89,398,995 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 87,444,873 - 87,520,580 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 82,501,134 - 82,576,855 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 84,361,061 - 84,436,912 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 84,361,061 - 84,437,084 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 104,034,185 - 104,110,203 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 83,369,613 - 83,446,622 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 77,806,510 - 77,882,181 (-) NCBI Celera Cytogenetic Map 2 q23 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Genomics
Comparative Map Data
Ankrd33b (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 83,988,505 - 84,070,311 (-) NCBI GRCr8 mRatBN7.2 2 82,277,604 - 82,359,420 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 82,283,108 - 82,358,872 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 89,323,286 - 89,398,995 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 87,444,873 - 87,520,580 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 82,501,134 - 82,576,855 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 84,361,061 - 84,436,912 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 84,361,061 - 84,437,084 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 104,034,185 - 104,110,203 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 83,369,613 - 83,446,622 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 2 77,806,510 - 77,882,181 (-) NCBI Celera Cytogenetic Map 2 q23 NCBI
ANKRD33B (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 10,564,070 - 10,657,816 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 10,564,070 - 10,657,816 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 10,564,182 - 10,657,928 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 10,615,464 - 10,703,225 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 5 10,602,518 - 10,695,071 (+) NCBI Celera Cytogenetic Map 5 p15.2 NCBI HuRef 5 10,548,592 - 10,640,738 (+) NCBI HuRef CHM1_1 5 10,564,397 - 10,657,792 (+) NCBI CHM1_1 T2T-CHM13v2.0 5 10,503,260 - 10,595,837 (+) NCBI T2T-CHM13v2.0
Ankrd33b (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 15 31,278,328 - 31,370,446 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 15 31,291,624 - 31,367,872 (-) Ensembl GRCm39 Ensembl GRCm38 15 31,291,479 - 31,367,802 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 15 31,291,478 - 31,367,726 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 15 31,221,234 - 31,297,514 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 15 31,241,253 - 31,312,154 (-) NCBI MGSCv36 mm8 Celera 15 31,976,877 - 32,055,999 (-) NCBI Celera Cytogenetic Map 15 B2 NCBI cM Map 15 12.76 NCBI
Ankrd33b (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955426 363,297 - 384,415 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955426 363,297 - 383,013 (+) NCBI ChiLan1.0 ChiLan1.0
ANKRD33B (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 10,805,733 - 10,899,234 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 8,957,133 - 9,052,845 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 10,878,054 - 10,970,319 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3
ANKRD33B (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 34 3,698,806 - 3,780,942 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 34 3,704,756 - 3,782,120 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 34 8,202,771 - 8,284,369 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 34 3,604,295 - 3,685,993 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 34 3,608,534 - 3,686,201 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 34 3,654,446 - 3,736,021 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 34 3,632,005 - 3,714,404 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 34 3,863,692 - 3,945,438 (-) NCBI UU_Cfam_GSD_1.0
Ankrd33b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
ANKRD33B (Sus scrofa - pig)
ANKRD33B (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 4 10,092,511 - 10,183,437 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 4 10,092,651 - 10,175,664 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666064 18,361,391 - 18,452,231 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ankrd33b (Heterocephalus glaber - naked mole-rat)
miRNA Target Status
Predicted Target Of
Count of predictions: 96 Count of miRNA genes: 70 Interacting mature miRNAs: 82 Transcripts: ENSRNOT00000059565 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction