Mafa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 109,313,021 - 109,315,813 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 107,432,292 - 107,435,084 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 107,433,605 - 107,434,690 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 109,171,427 - 109,174,218 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 111,395,100 - 111,397,891 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 111,341,011 - 111,343,802 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 116,779,368 - 116,781,815 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 116,780,681 - 116,781,766 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 116,670,579 - 116,673,032 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 113,707,043 - 113,708,128 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 7 | 103,795,440 - 103,796,236 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q34 | NCBI | | | | |
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MAFA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 143,428,064 - 143,430,732 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 143,419,182 - 143,430,732 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 144,510,234 - 144,512,902 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 144,582,658 - 144,583,719 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 8 | 140,823,405 - 140,824,466 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24.3 | NCBI | | | | | HuRef | 8 | 139,762,838 - 139,764,567 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 144,550,697 - 144,553,066 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 144,577,736 - 144,580,401 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mafa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 15 | 75,617,350 - 75,620,170 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 75,617,339 - 75,620,077 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 75,745,501 - 75,748,321 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 75,745,490 - 75,748,228 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 75,577,273 - 75,578,352 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 75,574,098 - 75,575,177 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 77,247,539 - 77,247,977 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | D3 | NCBI | | | | | cM Map | 15 | 34.82 | NCBI | | | | |
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Mafa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955454 | 2,135,484 - 2,136,560 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955454 | 2,134,340 - 2,136,962 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MAFA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 7 | 160,908,765 - 160,911,574 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 136,425,885 - 136,428,694 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 140,178,322 - 140,181,152 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
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MAFA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 13 | 37,122,653 - 37,123,895 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 37,122,731 - 37,123,771 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 37,080,084 - 37,081,140 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 37,595,211 - 37,596,267 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 37,595,211 - 37,596,251 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 37,269,620 - 37,270,676 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 37,386,782 - 37,387,836 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 37,867,731 - 37,868,787 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mafa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 1,258,281 - 1,260,665 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 8,684,393 - 8,685,475 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 8,684,392 - 8,686,758 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MAFA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 4 | 1,091,263 - 1,092,818 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 1,090,018 - 1,093,600 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 1,173,340 - 1,175,218 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MAFA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 137,647,459 - 137,650,169 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 137,648,746 - 137,649,804 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 2,253,402 - 2,256,090 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mafa (Heterocephalus glaber - naked mole-rat) |
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