Syce2 (synaptonemal complex central element protein 2) - Rat Genome Database

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Gene: Syce2 (synaptonemal complex central element protein 2) Rattus norvegicus
Analyze
Symbol: Syce2 (Ensembl: Farsa)
Name: synaptonemal complex central element protein 2 (Ensembl:phenylalanyl-tRNA synthetase subunit alpha)
RGD ID: 1311867
Description: Predicted to enable several functions, including ATP binding activity; phenylalanine-tRNA ligase activity; and tRNA binding activity. Predicted to be involved in phenylalanyl-tRNA aminoacylation; protein heterotetramerization; and synaptonemal complex assembly. Predicted to be located in chromosome and nucleoplasm. Predicted to be part of phenylalanine-tRNA ligase complex. Predicted to be active in central element. Orthologous to human SYCE2 (synaptonemal complex central element protein 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC364976; RGD1311867; similar to RIKEN cDNA 1700013H19
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,173,713 - 40,195,959 (-)NCBIGRCr8
mRatBN7.21923,266,236 - 23,291,265 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,268,869 - 23,300,980 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,091,751 - 30,109,889 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01930,746,111 - 30,764,249 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01932,968,801 - 32,986,939 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,982,003 - 26,002,399 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,983,169 - 26,001,317 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,956,382 - 36,976,940 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41924,925,123 - 24,943,271 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11924,930,880 - 24,948,097 (-)NCBI
Celera1922,825,765 - 22,843,913 (-)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15944401   PMID:22164254   PMID:22854038   PMID:22863743  


Genomics

Comparative Map Data
Syce2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,173,713 - 40,195,959 (-)NCBIGRCr8
mRatBN7.21923,266,236 - 23,291,265 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,268,869 - 23,300,980 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,091,751 - 30,109,889 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01930,746,111 - 30,764,249 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01932,968,801 - 32,986,939 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,982,003 - 26,002,399 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,983,169 - 26,001,317 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,956,382 - 36,976,940 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41924,925,123 - 24,943,271 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11924,930,880 - 24,948,097 (-)NCBI
Celera1922,825,765 - 22,843,913 (-)NCBICelera
Cytogenetic Map19q11NCBI
SYCE2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381912,898,786 - 12,919,293 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1912,898,786 - 12,919,293 (-)EnsemblGRCh38hg38GRCh38
GRCh371913,009,600 - 13,030,107 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361912,870,894 - 12,891,086 (-)NCBINCBI36Build 36hg18NCBI36
Celera1912,899,602 - 12,919,804 (-)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1912,581,761 - 12,601,966 (-)NCBIHuRef
CHM1_11913,010,391 - 13,030,583 (-)NCBICHM1_1
T2T-CHM13v2.01913,023,239 - 13,043,759 (-)NCBIT2T-CHM13v2.0
Syce2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,598,740 - 85,614,075 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,598,740 - 85,614,850 (+)EnsemblGRCm39 Ensembl
GRCm38884,872,111 - 84,887,446 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,872,111 - 84,888,221 (+)EnsemblGRCm38mm10GRCm38
MGSCv37887,396,010 - 87,411,345 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,762,216 - 87,777,500 (+)NCBIMGSCv36mm8
Celera889,171,634 - 89,187,006 (+)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.25NCBI
Syce2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,957,489 - 31,969,859 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,957,244 - 31,969,922 (-)NCBIChiLan1.0ChiLan1.0
SYCE2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22017,827,736 - 17,851,504 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11916,827,286 - 16,852,152 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01912,459,646 - 12,481,833 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11913,203,069 - 13,224,138 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,203,595 - 13,224,052 (-)Ensemblpanpan1.1panPan2
SYCE2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,267,985 - 49,285,986 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,281,773 - 49,283,880 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2049,140,210 - 49,158,239 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,784,878 - 49,802,918 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,787,220 - 49,801,946 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,996,012 - 49,014,035 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02049,422,479 - 49,440,511 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02049,665,031 - 49,683,057 (+)NCBIUU_Cfam_GSD_1.0
Syce2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,375,895 - 208,393,591 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366591,961,243 - 1,978,743 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366591,962,055 - 1,978,743 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SYCE2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl266,128,492 - 66,131,963 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1266,118,439 - 66,133,454 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,467,419 - 66,470,050 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SYCE2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,581,915 - 11,599,770 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660748,187,748 - 8,206,755 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Syce2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624901478,860 - 491,577 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Syce2
50 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:94
Count of miRNA genes:73
Interacting mature miRNAs:79
Transcripts:ENSRNOT00000004404
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat

Markers in Region
RH137276  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21923,269,426 - 23,269,632 (-)MAPPERmRatBN7.2
Rnor_6.01926,000,554 - 26,000,759NCBIRnor6.0
Rnor_5.01936,976,177 - 36,976,382UniSTSRnor5.0
RGSC_v3.41924,925,681 - 24,925,886UniSTSRGSC3.4
Celera1922,826,323 - 22,826,528UniSTS
Cytogenetic Map19q11UniSTS
RH134544  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21923,270,528 - 23,270,739 (-)MAPPERmRatBN7.2
Rnor_6.01925,999,447 - 25,999,657NCBIRnor6.0
Rnor_5.01936,975,070 - 36,975,280UniSTSRnor5.0
RGSC_v3.41924,926,783 - 24,926,993UniSTSRGSC3.4
Celera1922,827,425 - 22,827,635UniSTS
Cytogenetic Map19q11UniSTS
RH124647  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21923,269,062 - 23,270,209 (-)MAPPERmRatBN7.2
Rnor_6.01925,999,977 - 26,001,123NCBIRnor6.0
Rnor_5.01936,975,600 - 36,976,746UniSTSRnor5.0
RGSC_v3.41924,925,317 - 24,926,463UniSTSRGSC3.4
Celera1922,825,959 - 22,827,105UniSTS
Cytogenetic Map19q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 11 11 11 3 11 19
Low 3 41 42 26 19 26 8 11 71 22 22 11 8
Below cutoff 2 4 4 4 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000004370   ⟹   ENSRNOP00000004370
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,291,409 - 23,300,980 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000004404   ⟹   ENSRNOP00000004404
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,268,869 - 23,287,064 (-)Ensembl
Rnor_6.0 Ensembl1925,983,169 - 26,001,317 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000098538   ⟹   ENSRNOP00000083198
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,268,869 - 23,286,806 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000102461   ⟹   ENSRNOP00000080009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,291,409 - 23,300,980 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000110603   ⟹   ENSRNOP00000076655
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,271,993 - 23,300,979 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000111986   ⟹   ENSRNOP00000080885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,291,416 - 23,300,979 (-)Ensembl
RefSeq Acc Id: NM_001191557   ⟹   NP_001178486
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,173,716 - 40,191,863 (-)NCBI
mRatBN7.21923,268,869 - 23,287,017 (-)NCBI
Rnor_6.01925,983,169 - 26,001,317 (+)NCBI
Rnor_5.01936,956,382 - 36,976,940 (+)NCBI
Celera1922,825,765 - 22,843,913 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006255291   ⟹   XP_006255353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,173,713 - 40,195,959 (-)NCBI
mRatBN7.21923,266,236 - 23,291,265 (-)NCBI
Rnor_6.01925,982,003 - 26,002,399 (+)NCBI
Rnor_5.01936,956,382 - 36,976,940 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001178486 (Get FASTA)   NCBI Sequence Viewer  
  XP_006255353 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL92193 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000004404
  ENSRNOP00000004404.7
  ENSRNOP00000076655.1
  ENSRNOP00000080885.1
  ENSRNOP00000083198
  ENSRNOP00000083198.1
Reference Protein Sequences
RefSeq Acc Id: NP_001178486   ⟸   NM_001191557
- UniProtKB: A0A8I6GAG9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006255353   ⟸   XM_006255291
- Peptide Label: isoform X1
- UniProtKB: D4A671 (UniProtKB/TrEMBL),   A6IY65 (UniProtKB/TrEMBL),   A0A8I6GAG9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000004404   ⟸   ENSRNOT00000004404
RefSeq Acc Id: ENSRNOP00000080885   ⟸   ENSRNOT00000111986
RefSeq Acc Id: ENSRNOP00000083198   ⟸   ENSRNOT00000098538
RefSeq Acc Id: ENSRNOP00000080009   ⟸   ENSRNOT00000102461
RefSeq Acc Id: ENSRNOP00000004370   ⟸   ENSRNOT00000004370
RefSeq Acc Id: ENSRNOP00000076655   ⟸   ENSRNOT00000110603
Protein Domains
Aminoacyl-transfer RNA synthetases class-II family

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A671-F1-model_v2 AlphaFold D4A671 1-177 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311867 AgrOrtholog
BioCyc Gene G2FUF-6125 BioCyc
Ensembl Genes ENSRNOG00000003149 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000003279 Ensembl
Ensembl Transcript ENSRNOT00000004404.8 UniProtKB/TrEMBL
  ENSRNOT00000098538 ENTREZGENE
  ENSRNOT00000098538.1 UniProtKB/TrEMBL
  ENSRNOT00000110603.1 UniProtKB/TrEMBL
  ENSRNOT00000111986.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.2320 UniProtKB/TrEMBL
  1.10.10.2330 UniProtKB/TrEMBL
  3.30.1370.240 UniProtKB/TrEMBL
InterPro aa-tRNA-synth_II UniProtKB/TrEMBL
  aa-tRNA-synth_II/BPL/LPL UniProtKB/TrEMBL
  Phe-tRNA-synth_IIc_asu UniProtKB/TrEMBL
  Phenylalanyl-tRNA_Synthase UniProtKB/TrEMBL
  PheRS_DBD1 UniProtKB/TrEMBL
  PheRS_DBD2 UniProtKB/TrEMBL
  PheRS_DBD3 UniProtKB/TrEMBL
  Syce2 UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
NCBI Gene 364976 ENTREZGENE
PANTHER PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT UniProtKB/TrEMBL
  PHENYLALANYL-TRNA SYNTHETASE UniProtKB/TrEMBL
  PTHR28398 UniProtKB/TrEMBL
  SYNAPTONEMAL COMPLEX CENTRAL ELEMENT PROTEIN 2 UniProtKB/TrEMBL
Pfam PheRS_DBD1 UniProtKB/TrEMBL
  PheRS_DBD2 UniProtKB/TrEMBL
  PheRS_DBD3 UniProtKB/TrEMBL
  tRNA-synt_2d UniProtKB/TrEMBL
PhenoGen Syce2 PhenoGen
PROSITE AA_TRNA_LIGASE_II UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003149 RatGTEx
  ENSRNOG00000003279 RatGTEx
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
  SSF55681 UniProtKB/TrEMBL
UniProt A0A8I5XV96_RAT UniProtKB/TrEMBL
  A0A8I5ZRA4_RAT UniProtKB/TrEMBL
  A0A8I6GAG9 ENTREZGENE, UniProtKB/TrEMBL
  A6IY65 ENTREZGENE, UniProtKB/TrEMBL
  D4A671 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-27 Syce2  synaptonemal complex central element protein 2  RGD1311867_predicted  similar to RIKEN cDNA 1700013H19 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1311867_predicted  similar to RIKEN cDNA 1700013H19 (predicted)  LOC364976_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC364976_predicted  similar to RIKEN cDNA 1700013H19 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL