Scoc (short coiled-coil protein) - Rat Genome Database

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Gene: Scoc (short coiled-coil protein) Rattus norvegicus
Analyze
Symbol: Scoc
Name: short coiled-coil protein
RGD ID: 1311860
Description: Predicted to be involved in positive regulation of macroautophagy and regulation of protein complex stability. Predicted to be located in Golgi apparatus; endosome; and nucleoplasm. Predicted to colocalize with trans-Golgi network. Orthologous to human SCOC (short coiled-coil protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC364981; short coiled-coil protein A
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,564,166 - 41,593,932 (+)NCBIGRCr8
mRatBN7.21924,659,651 - 24,689,237 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,659,651 - 24,693,217 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1931,480,918 - 31,510,507 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01932,135,324 - 32,164,900 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01934,351,225 - 34,380,879 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01924,584,435 - 24,614,167 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,584,455 - 24,614,019 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,562,896 - 35,592,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,351,894 - 26,396,488 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11926,356,719 - 26,401,313 (+)NCBI
Celera1924,199,454 - 24,230,524 (+)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:22354037  


Genomics

Comparative Map Data
Scoc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,564,166 - 41,593,932 (+)NCBIGRCr8
mRatBN7.21924,659,651 - 24,689,237 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,659,651 - 24,693,217 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1931,480,918 - 31,510,507 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01932,135,324 - 32,164,900 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01934,351,225 - 34,380,879 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01924,584,435 - 24,614,167 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,584,455 - 24,614,019 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,562,896 - 35,592,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,351,894 - 26,396,488 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11926,356,719 - 26,401,313 (+)NCBI
Celera1924,199,454 - 24,230,524 (+)NCBICelera
Cytogenetic Map19q11NCBI
SCOC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384140,257,308 - 140,385,728 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4140,257,286 - 140,385,728 (+)EnsemblGRCh38hg38GRCh38
GRCh374141,178,462 - 141,306,882 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364141,397,890 - 141,523,154 (+)NCBINCBI36Build 36hg18NCBI36
Build 344141,536,044 - 141,661,309NCBI
Celera4138,508,468 - 138,633,708 (+)NCBICelera
Cytogenetic Map4q31.1NCBI
HuRef4136,908,314 - 137,034,355 (+)NCBIHuRef
CHM1_14141,155,714 - 141,281,064 (+)NCBICHM1_1
T2T-CHM13v2.04143,577,068 - 143,705,503 (+)NCBIT2T-CHM13v2.0
Scoc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,161,121 - 84,185,055 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,156,713 - 84,185,020 (-)EnsemblGRCm39 Ensembl
GRCm38883,434,492 - 83,458,436 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,430,084 - 83,458,391 (-)EnsemblGRCm38mm10GRCm38
MGSCv37885,958,392 - 85,982,290 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,324,600 - 86,348,454 (-)NCBIMGSCv36mm8
Celera887,727,992 - 87,750,160 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
Scoc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554283,404,326 - 3,435,759 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554283,404,372 - 3,435,653 (-)NCBIChiLan1.0ChiLan1.0
SCOC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23138,250,399 - 138,259,488 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14138,642,803 - 138,651,895 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04132,740,601 - 132,749,658 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14144,038,551 - 144,055,397 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4144,015,642 - 144,055,397 (+)Ensemblpanpan1.1panPan2
SCOC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1192,451,678 - 2,494,052 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl192,452,707 - 2,494,034 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha192,698,291 - 2,740,664 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0192,516,119 - 2,558,498 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl192,516,123 - 2,559,323 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1192,452,996 - 2,495,342 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0192,814,754 - 2,857,111 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0193,170,509 - 3,212,876 (-)NCBIUU_Cfam_GSD_1.0
Scoc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530149,966,434 - 50,074,432 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365357,403,767 - 7,412,903 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCOC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl886,679,843 - 86,690,676 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1886,680,782 - 86,690,691 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2892,172,592 - 92,182,503 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SCOC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1787,326,672 - 87,336,034 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603766,815,654 - 66,861,727 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Scoc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462500615,933 - 23,559 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462500615,912 - 23,559 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Scoc
155 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:187
Count of miRNA genes:120
Interacting mature miRNAs:151
Transcripts:ENSRNOT00000005124
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat

Markers in Region
D19Mit13  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21924,681,340 - 24,681,546 (-)MAPPERmRatBN7.2
Rnor_6.01924,592,125 - 24,592,330NCBIRnor6.0
Rnor_5.01935,570,586 - 35,570,791UniSTSRnor5.0
RGSC_v3.41926,388,593 - 26,388,799RGDRGSC3.4
RGSC_v3.41926,388,594 - 26,388,799UniSTSRGSC3.4
RGSC_v3.11926,393,419 - 26,393,625RGD
Celera1924,222,636 - 24,222,837UniSTS
Cytogenetic Map19q11UniSTS
RH131490  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21924,688,996 - 24,689,211 (-)MAPPERmRatBN7.2
Rnor_6.01924,584,460 - 24,584,674NCBIRnor6.0
Rnor_5.01935,562,921 - 35,563,135UniSTSRnor5.0
RGSC_v3.41926,396,250 - 26,396,464UniSTSRGSC3.4
Celera1924,230,286 - 24,230,500UniSTS
Cytogenetic Map19q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 56 40 19 40 8 10 74 35 41 11 8
Low 1 1 1 1
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000005124   ⟹   ENSRNOP00000005124
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1924,659,651 - 24,689,216 (+)Ensembl
Rnor_6.0 Ensembl1924,584,455 - 24,614,019 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105067   ⟹   ENSRNOP00000096248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1924,682,952 - 24,693,217 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000110184   ⟹   ENSRNOP00000089827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1924,685,496 - 24,689,235 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000115332   ⟹   ENSRNOP00000094199
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1924,683,066 - 24,689,235 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000116209   ⟹   ENSRNOP00000088593
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1924,682,974 - 24,689,235 (+)Ensembl
RefSeq Acc Id: NM_001013235   ⟹   NP_001013253
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81941,564,347 - 41,593,930 (+)NCBI
mRatBN7.21924,659,651 - 24,689,235 (+)NCBI
Rnor_6.01924,584,436 - 24,614,019 (-)NCBI
Rnor_5.01935,562,896 - 35,592,598 (-)NCBI
RGSC_v3.41926,351,894 - 26,396,488 (+)RGD
Celera1924,199,454 - 24,230,524 (+)RGD
Sequence:
RefSeq Acc Id: NM_001393861   ⟹   NP_001380790
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81941,587,647 - 41,593,932 (+)NCBI
mRatBN7.21924,682,952 - 24,689,237 (+)NCBI
RefSeq Acc Id: XM_006255292   ⟹   XP_006255354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81941,564,166 - 41,593,930 (+)NCBI
mRatBN7.21924,659,710 - 24,689,236 (+)NCBI
Rnor_6.01924,584,435 - 24,614,167 (-)NCBI
Rnor_5.01935,562,896 - 35,592,598 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006255295   ⟹   XP_006255357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81941,587,607 - 41,593,930 (+)NCBI
mRatBN7.21924,682,912 - 24,689,236 (+)NCBI
Rnor_6.01924,584,435 - 24,590,731 (-)NCBI
Rnor_5.01935,562,896 - 35,592,598 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039097909   ⟹   XP_038953837
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81941,587,506 - 41,593,930 (+)NCBI
mRatBN7.21924,682,887 - 24,689,236 (+)NCBI
RefSeq Acc Id: XM_063278175   ⟹   XP_063134245
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81941,587,556 - 41,593,930 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001013253   ⟸   NM_001013235
- Peptide Label: isoform 1
- UniProtKB: Q0D2M9 (UniProtKB/Swiss-Prot),   Q5RJZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006255354   ⟸   XM_006255292
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006255357   ⟸   XM_006255295
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AML3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000005124   ⟸   ENSRNOT00000005124
RefSeq Acc Id: XP_038953837   ⟸   XM_039097909
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GGD9 (UniProtKB/TrEMBL),   A6IYF1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000088593   ⟸   ENSRNOT00000116209
RefSeq Acc Id: ENSRNOP00000096248   ⟸   ENSRNOT00000105067
RefSeq Acc Id: ENSRNOP00000094199   ⟸   ENSRNOT00000115332
RefSeq Acc Id: ENSRNOP00000089827   ⟸   ENSRNOT00000110184
RefSeq Acc Id: NP_001380790   ⟸   NM_001393861
- Peptide Label: isoform 2
- UniProtKB: A0A8I6GGD9 (UniProtKB/TrEMBL),   A6IYF1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134245   ⟸   XM_063278175
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AML3 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5RJZ6-F1-model_v2 AlphaFold Q5RJZ6 1-122 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700999
Promoter ID:EPDNEW_R11522
Type:initiation region
Name:Scoc_1
Description:short coiled-coil protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01924,614,038 - 24,614,098EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311860 AgrOrtholog
BioCyc Gene G2FUF-6009 BioCyc
Ensembl Genes ENSRNOG00000003853 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000005124 ENTREZGENE
  ENSRNOT00000005124.8 UniProtKB/TrEMBL
  ENSRNOT00000105067.1 UniProtKB/TrEMBL
  ENSRNOT00000110184.1 UniProtKB/TrEMBL
  ENSRNOT00000115332.1 UniProtKB/TrEMBL
  ENSRNOT00000116209 ENTREZGENE
  ENSRNOT00000116209.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7106066 IMAGE-MGC_LOAD
  IMAGE:7127948 IMAGE-MGC_LOAD
InterPro SCOC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:364981 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105643 IMAGE-MGC_LOAD
  MGC:94774 IMAGE-MGC_LOAD
NCBI Gene 364981 ENTREZGENE
PANTHER GEO08385P1 UniProtKB/TrEMBL
  PTHR21614 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SHORT COILED-COIL PROTEIN UniProtKB/Swiss-Prot
Pfam DUF2205 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Scoc PhenoGen
RatGTEx ENSRNOG00000003853 RatGTEx
UniProt A0A8I6AB56_RAT UniProtKB/TrEMBL
  A0A8I6AML3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GGD9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GLI5_RAT UniProtKB/TrEMBL
  A0A8L2Q216_RAT UniProtKB/TrEMBL
  A6IYF1 ENTREZGENE, UniProtKB/TrEMBL
  Q0D2M9 ENTREZGENE
  Q5RJZ6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q0D2M9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Scoc  short coiled-coil protein  Scoc_predicted  short coiled-coil protein (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Scoc_predicted  short coiled-coil protein (predicted)      Symbol and Name status set to approved 70820 APPROVED