Sephs1 (selenophosphate synthetase 1) - Rat Genome Database

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Gene: Sephs1 (selenophosphate synthetase 1) Rattus norvegicus
Analyze
Symbol: Sephs1
Name: selenophosphate synthetase 1
RGD ID: 1311182
Description: Predicted to enable protein heterodimerization activity; protein homodimerization activity; and selenide, water dikinase activity. Predicted to be involved in selenocysteine biosynthetic process. Predicted to be located in nuclear membrane and plasma membrane. Predicted to be active in cytoplasm. Orthologous to human SEPHS1 (selenophosphate synthetase 1); PARTICIPATES IN selenoamino acid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC291314; selenide, water dikinase 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81778,263,725 - 78,296,132 (-)NCBIGRCr8
mRatBN7.21773,354,435 - 73,382,803 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1773,356,530 - 73,382,593 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1776,859,200 - 76,887,672 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01780,683,806 - 80,712,417 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01774,735,128 - 74,763,491 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01777,312,562 - 77,340,934 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1777,312,562 - 77,340,934 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01778,978,379 - 79,006,698 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41784,443,153 - 84,473,434 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11784,456,080 - 84,484,517 (-)NCBI
Celera1772,795,028 - 72,823,505 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,ISO)
nuclear membrane  (IEA,ISO)
plasma membrane  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:16189514   PMID:20471958   PMID:21516116   PMID:25416956   PMID:38105759  


Genomics

Comparative Map Data
Sephs1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81778,263,725 - 78,296,132 (-)NCBIGRCr8
mRatBN7.21773,354,435 - 73,382,803 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1773,356,530 - 73,382,593 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1776,859,200 - 76,887,672 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01780,683,806 - 80,712,417 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01774,735,128 - 74,763,491 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01777,312,562 - 77,340,934 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1777,312,562 - 77,340,934 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01778,978,379 - 79,006,698 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41784,443,153 - 84,473,434 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11784,456,080 - 84,484,517 (-)NCBI
Celera1772,795,028 - 72,823,505 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
SEPHS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381013,317,428 - 13,348,293 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1013,317,428 - 13,348,298 (-)EnsemblGRCh38hg38GRCh38
GRCh371013,359,428 - 13,390,293 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361013,400,086 - 13,430,286 (-)NCBINCBI36Build 36hg18NCBI36
Build 341013,400,088 - 13,430,286NCBI
Celera1013,287,201 - 13,317,394 (-)NCBICelera
Cytogenetic Map10p13NCBI
HuRef1013,272,252 - 13,328,716 (-)NCBIHuRef
CHM1_11013,360,412 - 13,391,270 (-)NCBICHM1_1
T2T-CHM13v2.01013,330,509 - 13,361,341 (-)NCBIT2T-CHM13v2.0
Sephs1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3924,886,375 - 4,915,368 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl24,886,375 - 4,915,368 (+)EnsemblGRCm39 Ensembl
GRCm3824,881,564 - 4,910,557 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl24,881,564 - 4,910,557 (+)EnsemblGRCm38mm10GRCm38
MGSCv3724,802,610 - 4,831,603 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3624,798,836 - 4,827,829 (+)NCBIMGSCv36mm8
Celera24,836,684 - 4,865,647 (+)NCBICelera
Cytogenetic Map2A1NCBI
cM Map23.02NCBI
Sephs1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542920,847,861 - 20,871,074 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542920,849,526 - 20,871,074 (+)NCBIChiLan1.0ChiLan1.0
SEPHS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2825,837,666 - 25,868,751 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11025,843,004 - 25,874,079 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01013,316,013 - 13,347,087 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11013,649,672 - 13,679,724 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1013,649,672 - 13,679,724 (-)Ensemblpanpan1.1panPan2
SEPHS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1223,147,303 - 23,178,808 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl223,146,353 - 23,177,174 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha220,206,289 - 20,234,810 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0223,451,063 - 23,484,219 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl223,451,285 - 23,483,201 (+)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0221,488,419 - 21,516,923 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0222,116,824 - 22,145,106 (+)NCBIUU_Cfam_GSD_1.0
Sephs1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093445,557,754 - 5,584,152 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936613107,821 - 134,733 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936613108,331 - 134,727 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEPHS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1048,362,463 - 48,386,431 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11048,359,379 - 48,385,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SEPHS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1913,348,588 - 13,375,559 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl913,345,798 - 13,375,536 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605118,879,109 - 18,910,654 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sephs1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248051,851,337 - 1,873,731 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248051,850,796 - 1,878,024 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sephs1
154 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:446
Count of miRNA genes:258
Interacting mature miRNAs:318
Transcripts:ENSRNOT00000024697, ENSRNOT00000054746
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)172840914773409147Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)173136839173951021Rat
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173199078476990784Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173199078481292925Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)173455084373951021Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)173747984782479847Rat
2317054Aia12Adjuvant induced arthritis QTL 124.24joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)173828150983281509Rat
2317060Aia26Adjuvant induced arthritis QTL 263.22joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)173828150983281509Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174054004180387013Rat
1358295Aocep1Aortic cell protein QTL 16.10.00000071thoracic aorta cellular protein amount (VT:0010598)aortic cell percentage174099000585990005Rat
7411575Bw140Body weight QTL 14030.20.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
8694181Bw151Body weight QTL 1514.360.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)174992015486533673Rat
2303580Gluco49Glucose level QTL 492blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)175004027186533673Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175090909986022412Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175349882882479847Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)175724684382046127Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)175900564977910000Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)176078142686533673Rat
7411577Bw141Body weight QTL 1410.001body mass (VT:0001259)body weight gain (CMO:0000420)176261951686533673Rat
1300131Bp193Blood pressure QTL 1933.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176364000973951021Rat
631502Cm26Cardiac mass QTL 263.71heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)176570358081153923Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)177100332581153923Rat
12904736Cm121Cardiac mass QTL 1210.043heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)177177462182479847Rat

Markers in Region
AI704007  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21773,357,282 - 73,357,485 (+)MAPPERmRatBN7.2
Rnor_6.01777,315,410 - 77,315,612NCBIRnor6.0
Rnor_5.01778,981,227 - 78,981,429UniSTSRnor5.0
RGSC_v3.41784,446,001 - 84,446,203UniSTSRGSC3.4
Celera1772,797,876 - 72,798,078UniSTS
RH 3.4 Map17729.1UniSTS
Cytogenetic Map17q12.3UniSTS
RH131426  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21773,358,010 - 73,358,198 (+)MAPPERmRatBN7.2
Rnor_6.01777,316,138 - 77,316,325NCBIRnor6.0
Rnor_5.01778,981,955 - 78,982,142UniSTSRnor5.0
RGSC_v3.41784,446,729 - 84,446,916UniSTSRGSC3.4
Celera1772,798,604 - 72,798,791UniSTS
RH 3.4 Map17728.7UniSTS
Cytogenetic Map17q12.3UniSTS
RH36724  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21773,357,206 - 73,357,283 (+)MAPPERmRatBN7.2
Rnor_6.01777,315,334 - 77,315,410NCBIRnor6.0
Rnor_5.01778,981,151 - 78,981,227UniSTSRnor5.0
RGSC_v3.41784,445,925 - 84,446,001UniSTSRGSC3.4
Celera1772,797,800 - 72,797,876UniSTS
Cytogenetic Map17q12.3UniSTS
SEPHS1_9288  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21773,357,127 - 73,357,961 (+)MAPPERmRatBN7.2
mRatBN7.21236,308,327 - 236,309,637 (+)MAPPERmRatBN7.2
Rnor_6.01257,220,875 - 257,222,184NCBIRnor6.0
Rnor_6.01777,315,255 - 77,316,088NCBIRnor6.0
Rnor_5.01778,981,072 - 78,981,905UniSTSRnor5.0
Rnor_5.01264,715,344 - 264,716,653UniSTSRnor5.0
RGSC_v3.41242,859,460 - 242,860,769UniSTSRGSC3.4
RGSC_v3.41784,445,846 - 84,446,679UniSTSRGSC3.4
Celera1772,797,721 - 72,798,554UniSTS
Celera1233,401,328 - 233,402,603UniSTS
Cytogenetic Map17q12.3UniSTS
Cytogenetic Map1q53UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 29 57 41 19 41 1 1 74 35 34 11 1
Low 14 7 10 7 7
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000024697   ⟹   ENSRNOP00000024697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1773,356,530 - 73,382,593 (-)Ensembl
Rnor_6.0 Ensembl1777,312,562 - 77,340,934 (-)Ensembl
RefSeq Acc Id: NM_001104630   ⟹   NP_001098100
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81778,263,725 - 78,292,082 (-)NCBI
mRatBN7.21773,354,435 - 73,382,784 (-)NCBI
Rnor_6.01777,312,562 - 77,340,934 (-)NCBI
Rnor_5.01778,978,379 - 79,006,698 (-)NCBI
RGSC_v3.41784,443,153 - 84,473,434 (-)RGD
Celera1772,795,028 - 72,823,505 (-)RGD
Sequence:
RefSeq Acc Id: XM_006254266   ⟹   XP_006254328
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81778,263,725 - 78,291,550 (-)NCBI
mRatBN7.21773,357,973 - 73,382,474 (-)NCBI
Rnor_6.01777,316,101 - 77,340,182 (-)NCBI
Rnor_5.01778,978,379 - 79,006,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039095540   ⟹   XP_038951468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81778,271,256 - 78,296,132 (-)NCBI
mRatBN7.21773,359,535 - 73,382,803 (-)NCBI
RefSeq Acc Id: XM_039095541   ⟹   XP_038951469
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81778,263,725 - 78,289,064 (-)NCBI
mRatBN7.21773,354,439 - 73,379,766 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001098100   ⟸   NM_001104630
- UniProtKB: D3ZFY0 (UniProtKB/TrEMBL),   A6JLZ9 (UniProtKB/TrEMBL),   A6JLZ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006254328   ⟸   XM_006254266
- Peptide Label: isoform X1
- UniProtKB: D3ZFY0 (UniProtKB/TrEMBL),   A6JLZ9 (UniProtKB/TrEMBL),   A6JLZ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000024697   ⟸   ENSRNOT00000024697
RefSeq Acc Id: XP_038951469   ⟸   XM_039095541
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038951468   ⟸   XM_039095540
- Peptide Label: isoform X2
Protein Domains
PurM-like C-terminal   PurM-like N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZFY0-F1-model_v2 AlphaFold D3ZFY0 1-392 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700575
Promoter ID:EPDNEW_R11099
Type:initiation region
Name:Sephs1_1
Description:selenophosphate synthetase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01777,340,936 - 77,340,996EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311182 AgrOrtholog
BioCyc Gene G2FUF-8683 BioCyc
BioCyc Pathway PWY-6281 [L-selenocysteine biosynthesis II (archaea and eukaryotes)] BioCyc
BioCyc Pathway Image PWY-6281 BioCyc
Ensembl Genes ENSRNOG00000018125 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000024697 ENTREZGENE
  ENSRNOT00000024697.6 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1330.10 UniProtKB/TrEMBL
  3.90.650.10 UniProtKB/TrEMBL
InterPro AIR_synth_C UniProtKB/TrEMBL
  PurM-like_C_sf UniProtKB/TrEMBL
  PurM-like_N_sf UniProtKB/TrEMBL
  PurM_N-like UniProtKB/TrEMBL
  SelD UniProtKB/TrEMBL
KEGG Report rno:291314 UniProtKB/TrEMBL
NCBI Gene 291314 ENTREZGENE
PANTHER PTHR10256 UniProtKB/TrEMBL
  SELENIDE, WATER DIKINASE 1 UniProtKB/TrEMBL
Pfam AIRS UniProtKB/TrEMBL
  AIRS_C UniProtKB/TrEMBL
PhenoGen Sephs1 PhenoGen
PIRSF Selenphspht_syn UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018125 RatGTEx
Superfamily-SCOP AIR_synth_C UniProtKB/TrEMBL
  SSF55326 UniProtKB/TrEMBL
UniProt A6JLZ8 ENTREZGENE, UniProtKB/TrEMBL
  A6JLZ9 ENTREZGENE, UniProtKB/TrEMBL
  D3ZFY0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Sephs1  selenophosphate synthetase 1  Sephs1_predicted  selenophosphate synthetase 1 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Sephs1_predicted  selenophosphate synthetase 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED