Kbtbd4 (kelch repeat and BTB domain containing 4) - Rat Genome Database

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Gene: Kbtbd4 (kelch repeat and BTB domain containing 4) Rattus norvegicus
Analyze
Symbol: Kbtbd4
Name: kelch repeat and BTB domain containing 4
RGD ID: 1310234
Description: Orthologous to human KBTBD4 (kelch repeat and BTB domain containing 4); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: kelch repeat and BTB (POZ) domain containing 4; kelch repeat and BTB domain-containing protein 4; LOC311185
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8397,339,500 - 97,345,599 (+)NCBIGRCr8
mRatBN7.2376,883,671 - 76,889,769 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl376,883,014 - 76,890,799 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx380,361,502 - 80,367,501 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0388,959,983 - 88,965,982 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0386,811,342 - 86,817,354 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0379,728,759 - 79,735,838 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl379,728,796 - 79,735,838 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0386,437,916 - 86,444,958 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4375,263,493 - 75,270,535 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1375,159,837 - 75,165,877 (+)NCBI
Celera376,092,776 - 76,099,818 (+)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Kbtbd4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8397,339,500 - 97,345,599 (+)NCBIGRCr8
mRatBN7.2376,883,671 - 76,889,769 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl376,883,014 - 76,890,799 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx380,361,502 - 80,367,501 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0388,959,983 - 88,965,982 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0386,811,342 - 86,817,354 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0379,728,759 - 79,735,838 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl379,728,796 - 79,735,838 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0386,437,916 - 86,444,958 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4375,263,493 - 75,270,535 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1375,159,837 - 75,165,877 (+)NCBI
Celera376,092,776 - 76,099,818 (+)NCBICelera
Cytogenetic Map3q24NCBI
KBTBD4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381147,572,197 - 47,578,970 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1147,572,197 - 47,578,976 (-)EnsemblGRCh38hg38GRCh38
GRCh371147,593,749 - 47,600,522 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361147,550,326 - 47,557,101 (-)NCBINCBI36Build 36hg18NCBI36
Celera1147,736,480 - 47,743,298 (-)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1147,294,699 - 47,301,644 (-)NCBIHuRef
CHM1_11147,592,992 - 47,599,808 (-)NCBICHM1_1
T2T-CHM13v2.01147,732,619 - 47,739,392 (-)NCBIT2T-CHM13v2.0
Kbtbd4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39290,735,113 - 90,740,905 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl290,735,084 - 90,741,970 (+)EnsemblGRCm39 Ensembl
GRCm38290,904,740 - 90,910,561 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl290,904,740 - 90,911,626 (+)EnsemblGRCm38mm10GRCm38
MGSCv37290,744,943 - 90,750,717 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36290,705,625 - 90,711,399 (+)NCBIMGSCv36mm8
Celera292,289,266 - 92,295,032 (+)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.44NCBI
Kbtbd4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955422718,065 - 726,324 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955422717,977 - 722,918 (+)NCBIChiLan1.0ChiLan1.0
KBTBD4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2949,776,644 - 49,785,227 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11149,796,403 - 49,803,215 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01147,521,908 - 47,528,721 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11148,072,211 - 48,078,326 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1148,072,211 - 48,078,368 (-)Ensemblpanpan1.1panPan2
KBTBD4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11842,075,776 - 42,081,079 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1842,075,891 - 42,081,095 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1840,807,079 - 40,812,404 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01842,731,626 - 42,736,949 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1842,731,750 - 42,736,942 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11842,218,857 - 42,224,178 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01841,773,171 - 41,778,492 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01842,503,214 - 42,508,539 (+)NCBIUU_Cfam_GSD_1.0
Kbtbd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494719,562,986 - 19,567,671 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365621,674,678 - 1,680,699 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365621,674,662 - 1,679,313 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KBTBD4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl215,036,903 - 15,043,824 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1215,036,719 - 15,043,825 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2216,213,395 - 16,220,388 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KBTBD4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1117,740,500 - 17,746,994 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl117,740,573 - 17,746,261 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038115,033,157 - 115,039,505 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kbtbd4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247671,244,036 - 1,248,299 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247671,243,952 - 1,248,299 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kbtbd4
24 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:47
Interacting mature miRNAs:53
Transcripts:ENSRNOT00000068124
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)3191609953Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)31086191289878372Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)31500542276927699Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)33035677398535386Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)33370334778196190Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)333703347104104347Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)33851780383517803Rat
1331777Bw24Body weight QTL 243.503body mass (VT:0001259)body weight (CMO:0000012)33945463789115240Rat
1331795Rf30Renal function QTL 303.708urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)33945463789115240Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)341874578104104347Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)34382736490905114Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)343827364121056321Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)347233430110362260Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)347233430110362260Rat
631665Bw8Body weight QTL 85.5body mass (VT:0001259)body weight (CMO:0000012)350437042119183768Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)350437504115638231Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)353184593115665732Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)35318469289878207Rat
731180Bp152Blood pressure QTL 1520.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35378111291609953Rat
731180Bp152Blood pressure QTL 1520.03arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)35378111291609953Rat
731180Bp152Blood pressure QTL 1520.03arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35378111291609953Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)361017749121056321Rat
631200Cm25Cardiac mass QTL 254.80.0001heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)36113434889115068Rat
1582210Bw71Body weight QTL 713.30.0012body mass (VT:0001259)body weight (CMO:0000012)364655305115665732Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)364655305115665732Rat
12879848Bw181Body weght QTL 1810.015body mass (VT:0001259)body weight (CMO:0000012)370348525121056321Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)370653097121056321Rat
1600376Arunc5Aerobic running capacity QTL 50.21exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)373376539118376539Rat

Markers in Region
AA963126  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2376,889,976 - 76,890,188 (+)MAPPERmRatBN7.2
Rnor_6.0379,735,016 - 79,735,227NCBIRnor6.0
Rnor_5.0386,444,136 - 86,444,347UniSTSRnor5.0
RGSC_v3.4375,269,713 - 75,269,924UniSTSRGSC3.4
Celera376,098,996 - 76,099,207UniSTS
Cytogenetic Map3q24UniSTS
BG378525  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2376,889,954 - 76,890,114 (+)MAPPERmRatBN7.2
Rnor_6.0379,734,994 - 79,735,153NCBIRnor6.0
Rnor_5.0386,444,114 - 86,444,273UniSTSRnor5.0
RGSC_v3.4375,269,691 - 75,269,850UniSTSRGSC3.4
Celera376,098,974 - 76,099,133UniSTS
RH 3.4 Map7811.2UniSTS
Cytogenetic Map3q24UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 22 15 6 12 6 74 30 41 11
Low 1 21 42 35 7 35 8 11 5 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000068124   ⟹   ENSRNOP00000060210
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl376,883,757 - 76,890,799 (+)Ensembl
Rnor_6.0 Ensembl379,728,796 - 79,735,838 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000084833   ⟹   ENSRNOP00000071649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl376,883,014 - 76,889,768 (+)Ensembl
Rnor_6.0 Ensembl379,729,739 - 79,734,313 (+)Ensembl
RefSeq Acc Id: NM_001399486   ⟹   NP_001386415
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8397,339,596 - 97,345,599 (+)NCBI
mRatBN7.2376,883,766 - 76,889,769 (+)NCBI
RefSeq Acc Id: NM_001399487   ⟹   NP_001386416
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8397,339,596 - 97,345,599 (+)NCBI
mRatBN7.2376,883,766 - 76,889,769 (+)NCBI
RefSeq Acc Id: XM_006234507   ⟹   XP_006234569
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8397,339,500 - 97,345,599 (+)NCBI
mRatBN7.2376,883,671 - 76,889,769 (+)NCBI
Rnor_6.0379,728,759 - 79,734,808 (+)NCBI
Rnor_5.0386,437,916 - 86,444,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017591715   ⟹   XP_017447204
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8397,339,826 - 97,345,599 (+)NCBI
mRatBN7.2376,883,981 - 76,889,769 (+)NCBI
Rnor_6.0379,728,961 - 79,734,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039104897   ⟹   XP_038960825
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8397,339,601 - 97,345,599 (+)NCBI
mRatBN7.2376,883,778 - 76,889,769 (+)NCBI
RefSeq Acc Id: XM_039104898   ⟹   XP_038960826
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8397,339,798 - 97,345,599 (+)NCBI
mRatBN7.2376,883,981 - 76,889,769 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_006234569   ⟸   XM_006234507
- Peptide Label: isoform X2
- UniProtKB: A6HN90 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017447204   ⟸   XM_017591715
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K102 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000071649   ⟸   ENSRNOT00000084833
RefSeq Acc Id: ENSRNOP00000060210   ⟸   ENSRNOT00000068124
RefSeq Acc Id: XP_038960825   ⟸   XM_039104897
- Peptide Label: isoform X3
- UniProtKB: A6HN91 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038960826   ⟸   XM_039104898
- Peptide Label: isoform X4
RefSeq Acc Id: NP_001386415   ⟸   NM_001399486
- Peptide Label: isoform 1
- UniProtKB: A6HN91 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001386416   ⟸   NM_001399487
- Peptide Label: isoform 2
Protein Domains
BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K102-F1-model_v2 AlphaFold A0A0G2K102 1-518 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692201
Promoter ID:EPDNEW_R2726
Type:multiple initiation site
Name:Kbtbd4_1
Description:kelch repeat and BTB domain containing 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0379,728,805 - 79,728,865EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310234 AgrOrtholog
BioCyc Gene G2FUF-48758 BioCyc
Ensembl Genes ENSRNOG00000009397 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000068124.3 UniProtKB/TrEMBL
  ENSRNOT00000084833.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.420 UniProtKB/TrEMBL
  2.120.10.80 UniProtKB/TrEMBL
InterPro BACK UniProtKB/TrEMBL
  BTB-kelch_protein UniProtKB/TrEMBL
  BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  KBTBD4 UniProtKB/TrEMBL
  KBTBD4_BACK UniProtKB/TrEMBL
  KBTBD4_BTB_POZ UniProtKB/TrEMBL
  Kelch-typ_b-propeller UniProtKB/TrEMBL
  Kelch_2 UniProtKB/TrEMBL
KEGG Report rno:311185 UniProtKB/TrEMBL
NCBI Gene 311185 ENTREZGENE
PANTHER KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 4 UniProtKB/TrEMBL
  PTHR47195 UniProtKB/TrEMBL
Pfam BACK UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
  Kelch_2 UniProtKB/TrEMBL
PhenoGen Kbtbd4 PhenoGen
PIRSF Kelch-like_protein_gigaxonin UniProtKB/TrEMBL
PROSITE BTB UniProtKB/TrEMBL
RatGTEx ENSRNOG00000009397 RatGTEx
SMART BACK UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
Superfamily-SCOP BTB/POZ_fold UniProtKB/TrEMBL
  SSF117281 UniProtKB/TrEMBL
UniProt A0A0G2K102 ENTREZGENE, UniProtKB/TrEMBL
  A6HN90 ENTREZGENE, UniProtKB/TrEMBL
  A6HN91 ENTREZGENE, UniProtKB/TrEMBL
  D3ZHJ7_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-17 Kbtbd4  kelch repeat and BTB domain containing 4  Kbtbd4  kelch repeat and BTB (POZ) domain containing 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Kbtbd4  kelch repeat and BTB (POZ) domain containing 4   Kbtbd4_predicted  kelch repeat and BTB (POZ) domain containing 4 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Kbtbd4_predicted  kelch repeat and BTB (POZ) domain containing 4 (predicted)      Symbol and Name status set to approved 70820 APPROVED