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Gene: Tsks (testis-specific serine kinase substrate) Rattus norvegicus

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Symbol:

Tsks

Name:

testis-specific serine kinase substrate

RGD ID:

727784

Description:

Predicted to enable protein kinase binding activity. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in centriole. Orthologous to human TSKS (testis specific serine kinase substrate); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

serine/threonine kinase 22 substrate 1; STK22 substrate 1; Stk22s1; testis-specific kinase substrate

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	104,550,897 - 104,578,145 (+)	Ensembl				GRCr8
mRatBN7.2	1	95,414,312 - 95,441,670 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	95,414,157 - 95,441,662 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	100,812,990 - 100,827,066 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	109,285,655 - 109,299,731 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	102,576,049 - 102,590,125 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	100,926,569 - 100,953,950 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	100,939,740 - 100,953,975 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	95,417,184 - 95,431,808 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	89,689,167 - 89,703,223 (+)	NCBI		Celera
RGSC_v3.1	1	95,495,294 - 95,509,917 (+)	NCBI
Cytogenetic Map	1	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

myoepithelioma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acrylamide (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

dexamethasone (ISO)

dextran sulfate (ISO)

diclofenac (EXP)

folic acid (ISO)

gentamycin (EXP)

indometacin (ISO)

paracetamol (EXP)

phenobarbital (ISO)

S-nitrosoglutathione (ISO)

sodium arsenate (ISO)

sodium fluoride (ISO)

triptonide (ISO)

tunicamycin (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

centriole (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

protein kinase binding (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	A novel family of serine/threonine kinases participating in spermiogenesis.	Kueng P, etal., J Cell Biol 1997 Dec 29;139(7):1851-9.
3.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:18495105	PMID:18533145	PMID:19389623

Genomics

Comparative Map Data

Tsks
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	104,550,897 - 104,578,145 (+)	Ensembl				GRCr8
mRatBN7.2	1	95,414,312 - 95,441,670 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	95,414,157 - 95,441,662 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	100,812,990 - 100,827,066 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	109,285,655 - 109,299,731 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	102,576,049 - 102,590,125 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	100,926,569 - 100,953,950 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	100,939,740 - 100,953,975 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	95,417,184 - 95,431,808 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	89,689,167 - 89,703,223 (+)	NCBI		Celera
RGSC_v3.1	1	95,495,294 - 95,509,917 (+)	NCBI
Cytogenetic Map	1	q22	NCBI

TSKS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	49,739,760 - 49,763,306 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	49,739,753 - 49,763,306 (-)	Ensembl			hg38	GRCh38
GRCh37	19	50,243,017 - 50,266,563 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	54,934,823 - 54,958,327 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	47,112,468 - 47,135,972 (-)	NCBI		Celera
Cytogenetic Map	19	q13.33	NCBI
HuRef	19	46,619,846 - 46,642,854 (-)	NCBI		HuRef
CHM1_1	19	50,244,803 - 50,268,301 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	52,739,905 - 52,763,451 (-)	NCBI		T2T-CHM13v2.0

Tsks
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	44,579,044 - 44,607,465 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	44,592,628 - 44,607,459 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	44,929,472 - 44,958,041 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	44,943,204 - 44,958,035 (+)	Ensembl			mm10	GRCm38
MGSCv37	7	52,198,610 - 52,213,405 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	44,811,303 - 44,826,077 (+)	NCBI		MGSCv36	mm8
Celera	7	40,393,522 - 40,409,643 (+)	NCBI		Celera
Cytogenetic Map	7	B3	NCBI
cM Map	7	29.07	NCBI

Tsks
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955559	1,151,247 - 1,162,765 (+)	Ensembl
ChiLan1.0	NW_004955559	1,151,247 - 1,162,856 (+)	NCBI	ChiLan1.0	ChiLan1.0

TSKS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	55,856,262 - 55,881,707 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	57,777,017 - 57,802,484 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	46,753,614 - 46,776,505 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	55,672,892 - 55,694,031 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	55,672,894 - 55,694,031 (-)	Ensembl			panPan2	panpan1.1

TSKS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	106,791,050 - 106,805,595 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	106,747,860 - 106,805,699 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	106,373,967 - 106,389,464 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	107,312,024 - 107,327,299 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	107,312,067 - 107,327,290 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	106,984,048 - 106,999,580 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	106,626,070 - 106,641,599 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	107,466,549 - 107,481,870 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tsks
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	21,921,363 - 21,937,038 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936664	3,539,553 - 3,555,315 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936664	3,539,553 - 3,555,315 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSKS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	54,761,193 - 54,779,952 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	54,762,173 - 54,785,211 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	50,491,251 - 50,508,942 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSKS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	42,903,240 - 42,927,192 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	42,903,266 - 42,927,014 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666073	22,870,533 - 22,899,792 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tsks
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	4,546,432 - 4,560,970 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624832	4,546,999 - 4,561,777 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tsks
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	154,586,047 - 154,599,944 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tsks
365 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	88
Count of miRNA genes:	73
Interacting mature miRNAs:	78
Transcripts:	ENSRNOT00000049584
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	87889942	132889942	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1331793	Bp200	Blood pressure QTL 200	3.71601		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	102780511	182384005	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
2300324	Fetw1	Fetal weight QTL 1	12.1	0.005	fetal growth trait (VT:0004201)	fetal body weight (CMO:0002080)	1	92963855	109494029	Rat
1554320	Bmd1	Bone mineral density QTL 1	12.2	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	101228864	146228864	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	87785026	142582336	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	83019780	128019780	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
631519	Pia11	Pristane induced arthritis QTL 11	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	93903998	191260518	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	84107164	115183752	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	91302413	136302413	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
724567	Tcas6	Tongue tumor susceptibility QTL 6	6.85		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	102359314	153680016	Rat
724521	Uae1	Urinary albumin excretion QTL 1	3.8	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	99645382	182701046	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	86622262	131622262	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
631205	Bp196	Blood pressure QTL 196	4	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	98879955	208479939	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)	1	92683681	137683681	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	86993904	131993904	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	87558587	132558587	Rat
1331749	Hrtrt11	Heart rate QTL 11	2.973		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	92683681	137683681	Rat
737977	Bp160	Blood pressure QTL 160		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	97582336	142582336	Rat
2293142	Bp314	Blood pressure QTL 314			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	101594089	146594089	Rat
61433	Cia2	Collagen induced arthritis QTL 2	5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	100345976	145345976	Rat
724529	Cm16	Cardiac mass QTL 16	2.7		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	1	96717367	160111531	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	10	56	141	81	80	49	39	49	6	275	125	8	114	77	84	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001437444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_199088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC127719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY346104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000049584 ⟹ ENSRNOP00000043218

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	104,564,037 - 104,578,145 (+)	Ensembl
mRatBN7.2 Ensembl	1	95,427,588 - 95,441,662 (+)	Ensembl
Rnor_6.0 Ensembl	1	100,939,740 - 100,953,975 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117467 ⟹ ENSRNOP00000087658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	104,550,897 - 104,578,145 (+)	Ensembl
mRatBN7.2 Ensembl	1	95,414,157 - 95,441,662 (+)	Ensembl

RefSeq Acc Id:

NM_199088 ⟹ NP_954519

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,564,071 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,588 - 95,441,664 (+)	NCBI
Rnor_6.0	1	100,939,868 - 100,953,944 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI
RGSC_v3.4	1	95,417,184 - 95,431,808 (+)	RGD
Celera	1	89,689,167 - 89,703,223 (+)	RGD

Sequence:

show sequence

CCTGGGAGCAGGCCCCCCCGCGCCATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAG
AGATCCACGAAGCGGGGGACCCACCTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGC
TCCCGGGGGGGTGACCAGCCCTGCCAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCAT
GGGGTGGAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAG
CCTGCACCAACGTGTCCTTGCTCAACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTC
GACCACAGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGG
GCTCCAGAGGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCA
AAGACTCCATCACCAGCTTGAAGGAAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCA
GAGCGAGTGCTCTGTGCTGAGTGAGAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAG
GGGTACTGCAGTCAATTGAAGGGCCCCCGCCCTGATGTTCTGACCCAGGAGAACTGCCGCAAGG
TGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGTT
GGAGGAGAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCGGAGACAGGAGGCC
GAGTTGCAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGCCTAGGCCCTACTA
CTCCCATTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGCGGCCGCGAGGCCT
GCCCTCCAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCTGAGCGAGCAGGAG
TTGCAGAAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCGCTGGCAGCTCGGT
GGCATCAGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCCTGGGCGGCCGTCT
GGATGGCTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTCCGCACGGGGTTTG
CAGGAGCTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCAGCAGTGTCTGTCG
CTTCACTGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGGAGGAGCTGGGACG
GCAACTTCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCGTCCTGCCCAAGGT
CCCTGTCCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTACAGCAGCTGCTGG
AACGTGCGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTCCTGCCTGCCCCAG
TTGCCAGAGGCTACACAAGAAGATTCTGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGG
GCAGAGGCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAAGCCGTTCGGGCCAAGAACCTAC
TGCTGACGGACAAGATGAAGCCGGAGGAGAAGGTGGCCACTTTGGACTATATGCATTTGAAGAT
GTGTTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACAGGGGCAATGGGGGGA
GGAAGCACTGGAGGGGCTCCCCCTAAACGTGGGGGTCCAGGCTCTGAACAATAAATGGCCTCTC
ATGCTGGCATGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229014 ⟹ XP_006229076

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,536 - 95,441,670 (+)	NCBI
Rnor_6.0	1	100,939,809 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

CAGGAGCTAGAGACCCTGAGCACCAGGGGGGGGCGGGCAGAGTAGATGGTGAGTCTCCCCCTGG
GAGCAGGCCCCCCCGCGCCATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATC
CACGAAGCGGGGGACCCACCTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCG
GGGGGGTGACCAGCCCTGCCAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGT
GGAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGC
ACCAACGTGTCCTTGCTCAACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCA
CAGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCC
AGAGGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGAC
TCCATCACCAGCTTGAAGGAAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCG
AGTGCTCTGTGCTGAGTGAGAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTA
CTGCAGTCAATTGAAGGGCCCCCGCCCTGATGTTCTGACCCAGGAGAACTGCCGCAAGGTGACC
CGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGTTGGAGG
AGAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCGGAGACAGGAGGCCGAGTT
GCAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGCCTAGGCCCTACTACTCCC
ATTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGCGGCCGCGAGGCCTGCCCT
CCAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCA
GAAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCGCTGGCAGCTCGGTGGCAT
CAGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCCTGGGCGGCCGTCTGGATG
GCTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTCCGCACGGGGTTTGCAGGA
GCTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCAGCAGTGTCTGTCGCTTCA
CTGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGGAGGAGCTGGGACGGCAAC
TTCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCGTCCTGCCCAAGGTCCCTG
TCCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTACAGCAGCTGCTGGAACGT
GCGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTCCTGCCTGCCCCAGTTGCC
AGAGGCTACACAAGAAGATTCTGCCCAGTCCAGTAAGCCCAGCGGCGCCTACACTCCTCTCCCC
AGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCG
GCTGGCCCAAGACGAAGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAG
TGAGGACGGAGGCAGAGGGCATGGGAGGAGGGGAGAAGGTGGCCACTTTGGACTATATGCATTT
GAAGATGTGTTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACAGGGGCAATG
GGGGGAGGAAGCACTGGAGGGGCTCCCCCTAAACGTGGGGGTCCAGGCTCTGAACAATAAATGG
CCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_006229015 ⟹ XP_006229077

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,612 - 95,441,670 (+)	NCBI
Rnor_6.0	1	100,939,892 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

ATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCAC
CTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCGGGGGGGTGACCAGCCCTGC
CAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGTGGAGCCCCGGATGTCCCAC
GAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGCACCAACGTGTCCTTGCTCA
ACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCACAGAGGACAGTGGTCCACT
GGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCAGAGGACCCTGACATCACA
GAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCATCACCAGCTTGAAGG
AAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCGAGTGCTCTGTGCTGAGTGA
GAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTACTGCAGTCAATTGAAGGAG
AACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGA
ACTCTGCCTTGTTGGAGGAGAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCG
GAGACAGGAGGCCGAGTTGCAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGC
CTAGGCCCTACTACTCCCATTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGC
GGCCGCGAGGCCTGCCCTCCAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCT
GAGCGAGCAGGAGTTGCAGAAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCG
CTGGCAGCTCGGTGGCATCAGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCC
TGGGCGGCCGTCTGGATGGCTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTC
CGCACGGGGTTTGCAGGAGCTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCA
GCAGTGTCTGTCGCTTCACTGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGG
AGGAGCTGGGACGGCAACTTCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCG
TCCTGCCCAAGGTCCCTGTCCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTA
CAGCAGCTGCTGGAACGTGCGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTC
CTGCCTGCCCCAGTTGCCAGAGGCTACACAAGAAGATTCTGCCCAGTCCAGTAAGCCCAGCGGC
GCCTACACTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGC
CCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAAGCCGTTCGGGCCAAGAACCTACTGCTGACG
GACAAGATGAAGCCGGAGTGAGGACGGAGGCAGAGGGCATGGGAGGAGGGGAGAAGGTGGCCAC
TTTGGACTATATGCATTTGAAGATGTGTTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAG
GGGTCCACAGGGGCAATGGGGGGAGGAAGCACTGGAGGGGCTCCCCCTAAACGTGGGGGTCCAG
GCTCTGAACAATAAATGGCCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_006229016 ⟹ XP_006229078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,414,312 - 95,441,670 (+)	NCBI
Rnor_6.0	1	100,926,569 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

CCTCTCTCTTTGATTGGCTGAATAGTAAAGATACATGGCGATGATTGGTGCAGTACTGGGCTAT
TTCCGTTCGGAGCAGGGAGGCAGGGGGCGTTGCCCTAGAGACAGGCGGAGTTCGATGACACACT
CTGGAACCGCCCCCTAAACGGCTGAAACCAACGCTAATTGGATGGACCATCAGCTCCGCGCCAG
GAGGGAGGGATGTAAGAGTCTGACGGAGGCGGAACTTCAGGAAAAGAAGACCAATGGGGTGGAG
CCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGCACCA
ACGTGTCCTTGCTCAACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCACAGA
GGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCAGAG
GACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCA
TCACCAGCTTGAAGGAAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCGAGTG
CTCTGTGCTGAGTGAGAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTACTGC
AGTCAATTGAAGGGCCCCCGCCCTGATGTTCTGACCCAGGAGAACTGCCGCAAGGTGACCCGTT
CAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGTTGGAGGAGAA
GCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCGGAGACAGGAGGCCGAGTTGCAG
GAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGCCTAGGCCCTACTACTCCCATTC
AGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGCGGCCGCGAGGCCTGCCCTCCAA
TGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAGAAG
GTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCGCTGGCAGCTCGGTGGCATCAGG
AGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCCTGGGCGGCCGTCTGGATGGCTT
TCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTCCGCACGGGGTTTGCAGGAGCTG
CGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCAGCAGTGTCTGTCGCTTCACTGA
GGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGGAGGAGCTGGGACGGCAACTTCA
AAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCGTCCTGCCCAAGGTCCCTGTCCT
CGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTACAGCAGCTGCTGGAACGTGCGC
TGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTCCTGCCTGCCCCAGTTGCCAGAG
GCTACACAAGAAGATTCTGCCCAGTCCAGTAAGCCCAGCGGCGCCTACACTCCTCTCCCCAGGA
GCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGCTG
GCCCAAGACGAAGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGTGAG
GACGGAGGCAGAGGGCATGGGAGGAGGGGAGAAGGTGGCCACTTTGGACTATATGCATTTGAAG
ATGTGTTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACAGGGGCAATGGGGG
GAGGAAGCACTGGAGGGGCTCCCCCTAAACGTGGGGGTCCAGGCTCTGAACAATAAATGGCCTC
TCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_006229017 ⟹ XP_006229079

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,612 - 95,441,641 (+)	NCBI
Rnor_6.0	1	100,939,892 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

ATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCAC
CTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCGGGGGGGTGACCAGCCCTGC
CAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGTGGAGCCCCGGATGTCCCAC
GAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGCACCAACGTGTCCTTGCTCA
ACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCACAGAGGACAGTGGTCCACT
GGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCAGAGGACCCTGACATCACA
GAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCATCACCAGCTTGAAGG
AAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCGAGTGCTCTGTGCTGAGTGA
GAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTACTGCAGTCAATTGAAGGAG
AACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGA
ACTCTGCCTTGTTGGAGGAGAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCG
GAGACAGGAGGCCGAGTTGCAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGC
CTAGGCCCTACTACTCCCATTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGC
GGCCGCGAGGCCTGCCCTCCAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCT
GAGCGAGCAGGAGTTGCAGAAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCG
CTGGCAGCTCGGTGGCATCAGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCC
TGGGCGGCCGTCTGGATGGCTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTC
CGCACGGGGTTTGCAGGAGCTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCA
GCAGTGTCTGTCGCTTCACTGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGG
AGGAGCTGGGACGGCAACTTCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCG
TCCTGCCCAAGGTCCCTGTCCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTA
CAGCAGCTGCTGGAACGTGCGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTC
CTGCCTGCCCCAGTTGCCAGAGGCTACACAAGAAGATTCTGGAGCTGGAGCGCCAGGCCTTGGC
CAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAAGCCGTTCGG
GCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGGAGAAGGTGGCCACTTTGGACTATA
TGCATTTGAAGATGTGTTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACAGG
GGCAATGGGGGGAGGAAGCACTGGAGGGGCTCCCCCTAAACGTGGGGGTCCAGGCTCTGAACAA
TAAATGGCCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_006229018 ⟹ XP_006229080

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,539 - 95,441,670 (+)	NCBI
Rnor_6.0	1	100,939,810 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

AGGAGCTAGAGACCCTGAGCACCAGGGGGGGGCGGGCAGAGTAGATGGTGAGTCTCCCCCTGGG
AGCAGGCCCCCCCGCGCCATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCC
ACGAAGCGGGGGACCCACCTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCGG
GGGGGTGACCAGCCCTGCCAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGTG
GAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGCA
CCAACGTGTCCTTGCTCAACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCAC
AGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCA
GAGGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACT
CCATCACCAGCTTGAAGGAAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCGA
GTGCTCTGTGCTGAGTGAGAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTAC
TGCAGTCAATTGAAGGGCCCCCGCCCTGATGTTCTGACCCAGGAGAACTGCCGCAAGGTGACCC
GTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGTTGGAGGA
GAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCGGAGACAGGAGGCCGAGTTG
CAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGCCTAGGCCCTACTACTCCCA
TTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGCGGCCGCGAGGCCTGCCCTC
CAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAG
AAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCGCTGGCAGCTCGGTGGCATC
AGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCCTGGGCGGCCGTCTGGATGG
CTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTCCGCACGGGGTTTGCAGGAG
CTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCAGCAGTGTCTGTCGCTTCAC
TGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGGAGGAGCTGGGACGGCAACT
TCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCGTCCTGCCCAAGGTCCCTGT
CCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTACAGCAGCTGCTGGAACGTG
CGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTCCTGCCTGCCCCAGTTGCCA
GAGGCTACACAAGAAGATTCTGCCCAGTCCAGTAAGCCCAGCGGCGCCTACACTCCTCTCCCCA
GGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGG
CTGGCCCAAGACGAAGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGG
AGAAGGTGGCCACTTTGGACTATATGCATTTGAAGATGTGTTCCCTCCACGACCAACTCAGCCA
CCTGCCACTTGAGGGGTCCACAGGGGCAATGGGGGGAGGAAGCACTGGAGGGGCTCCCCCTAAA
CGTGGGGGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_006229019 ⟹ XP_006229081

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,540 - 95,441,664 (+)	NCBI
Rnor_6.0	1	100,939,810 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

AGGAGCTAGAGACCCTGAGCACCAGGGGGGGGCGGGCAGAGTAGATGGTGAGTCTCCCCCTGGG
AGCAGGCCCCCCCGCGCCATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCC
ACGAAGCGGGGGACCCACCTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCGG
GGGGGTGACCAGCCCTGCCAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGTG
GAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGCA
CCAACGTGTCCTTGCTCAACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCAC
AGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCA
GAGGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACT
CCATCACCAGCTTGAAGGAAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCGA
GTGCTCTGTGCTGAGTGAGAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTAC
TGCAGTCAATTGAAGGGCCCCCGCCCTGATGTTCTGACCCAGGAGAACTGCCGCAAGGTGACCC
GTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGTTGGAGGA
GAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCGGAGACAGGAGGCCGAGTTG
CAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGCCTAGGCCCTACTACTCCCA
TTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGCGGCCGCGAGGCCTGCCCTC
CAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAG
AAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCGCTGGCAGCTCGGTGGCATC
AGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCCTGGGCGGCCGTCTGGATGG
CTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTCCGCACGGGGTTTGCAGGAG
CTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCAGCAGTGTCTGTCGCTTCAC
TGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGGAGGAGCTGGGACGGCAACT
TCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCGTCCTGCCCAAGGTCCCTGT
CCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTACAGCAGCTGCTGGAACGTG
CGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTCCTGCCTGCCCCAGTTGCCA
GAGGCTACACAAGAAGATTCTGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAG
GCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAAGCCGTTCGGGCCAAGAACCTACTGCTGA
CGGACAAGATGAAGCCGGAGTGAGGACGGAGGCAGAGGGCATGGGAGGAGGGGAGAAGGTGGCC
ACTTTGGACTATATGCATTTGAAGATGTGTTCCCTCCACGACCAACTCAGCCACCTGCCACTTG
AGGGGTCCACAGGGGCAATGGGGGGAGGAAGCACTGGAGGGGCTCCCCCTAAACGTGGGGGTCC
AGGCTCTGAACAATAAATGGCCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_006229020 ⟹ XP_006229082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,612 - 95,441,664 (+)	NCBI
Rnor_6.0	1	100,939,892 - 100,953,950 (+)	NCBI
Rnor_5.0	1	101,991,046 - 102,018,339 (+)	NCBI

Sequence:

show sequence

ATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCAC
CTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCGGGGGGGTGACCAGCCCTGC
CAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGTGGAGCCCCGGATGTCCCAC
GAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGCACCAACGTGTCCTTGCTCA
ACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCACAGAGGACAGTGGTCCACT
GGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCAGAGGACCCTGACATCACA
GAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCATCACCAGCTTGAAGG
AAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCGAGTGCTCTGTGCTGAGTGA
GAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTACTGCAGTCAATTGAAGGAG
AACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGA
ACTCTGCCTTGTTGGAGGAGAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCG
GAGACAGGAGGCCGAGTTGCAGGAGCTGGAGCAAAAACTAGAGGCTGGCCTCTCCCGGCATGGC
CTAGGCCCTACTACTCCCATTCAGGGCTGCTCCGGTCCTCCTGGTAGCCCGGAGGAACCCCCGC
GGCCGCGAGGCCTGCCCTCCAATGGCTGGGGCATGGCAATCCGCGCAGGGGAGGGACCCTCGCT
GAGCGAGCAGGAGTTGCAGAAGGTCTCCAGCGGCCTAGAGGAGCTGAGGAGGGAGGTGTCCTCG
CTGGCAGCTCGGTGGCATCAGGAGGAGGGGGCGGTGCAGGAGGCCCTAAGGTTGCTGGGAGGCC
TGGGCGGCCGTCTGGATGGCTTTCTGGGCCAATGGGAGCGGGCGCAGCGGGAACAAGCACAGTC
CGCACGGGGTTTGCAGGAGCTGCGAGGACGAGCAGATGAGCTGTGCACTATGGTGGAGAGGTCA
GCAGTGTCTGTCGCTTCACTGAGGAGCGAACTGGAGGCACTGGGCCCAGTAAAACCGATTCTGG
AGGAGCTGGGACGGCAACTTCAAAACTCCCGAAGGGGACCTGACCATGTCTTGAACTTGGATCG
TCCTGCCCAAGGTCCCTGTCCTCGATGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTA
CAGCAGCTGCTGGAACGTGCGCTGACCCCACTGGTGGACGAAGTGAAGCAGAAGGGTCTGGCTC
CTGCCTGCCCCAGTTGCCAGAGGCTACACAAGAAGATTCTGGAGCTGGAGCGCCAGGCCTTGGC
CAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAAGCCGTTCGG
GCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGTGAGGACGGAGGCAGAGGGCATGGG
AGGAGGGGAGAAGGTGGCCACTTTGGACTATATGCATTTGAAGATGTGTTCCCTCCACGACCAA
CTCAGCCACCTGCCACTTGAGGGGTCCACAGGGGCAATGGGGGGAGGAAGCACTGGAGGGGCTC
CCCCTAAACGTGGGGGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_017588926 ⟹ XP_017444415

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI
mRatBN7.2	1	95,427,537 - 95,441,670 (+)	NCBI
Rnor_6.0	1	100,939,809 - 100,953,950 (+)	NCBI

Sequence:

show sequence

CAGGAGCTAGAGACCCTGAGCACCAGGGGGGGGCGGGCAGAGTAGATGGTGAGTCTCCCCCTGG
GAGCAGGCCCCCCCGCGCCATGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATC
CACGAAGCGGGGGACCCACCTGCGGGGGTGGAGAGCCGCGCCCAGCTGGTCCCCGAAGCTCCCG
GGGGGGTGACCAGCCCTGCCAAGGGGATAACAAAGAAAAAGAAGGCCGTGTCCTTCCATGGGGT
GGAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCAGCCTGC
ACCAACGTGTCCTTGCTCAACCTGGCTGCCATGGAGCCCGACTCCTCCGGTACAGACTCGACCA
CAGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCC
AGAGGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGAC
TCCATCACCAGCTTGAAGGAAAAGACCACGCGGGTTAATCAGCATGTTCAGACACTGCAGAGCG
AGTGCTCTGTGCTGAGTGAGAATCTGGAAAGAAGGCGGCAGGAGGCAGAAGAGTTGGAGGGGTA
CTGCAGTCAATTGAAGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACC
AATGTCCTGAAGCAGAACTCTGCCTTGTTGGAGGAGAAGCTAAGATACCTCCAGCAGCAACTGC
AGGATGAGACGCCCCGGAGACAGGAGGCCGAGTTGCAGGAGCTGGAGCAAAAACTAGAGGCTGG
CCTCTCCCGGCATGGCCTAGGCCCTACTACTCCCATTCAGGGCTGCTCCGGTCCTCCTGGTAGC
CCGGAGGAACCCCCGCGGCCGCGAGGCCTGCCCTCCAATGGCTGGGGCATGGCAATCCGCGCAG
GGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAGAAGGTCTCCAGCGGCCTAGAGGAGCTGAG
GAGGGAGGTGTCCTCGCTGGCAGCTCGGTGGCATCAGGAGGAGGGGGCGGTGCAGGAGGCCCTA
AGGTTGCTGGGAGGCCTGGGCGGCCGTCTGGATGGCTTTCTGGGCCAATGGGAGCGGGCGCAGC
GGGAACAAGCACAGTCCGCACGGGGTTTGCAGGAGCTGCGAGGACGAGCAGATGAGCTGTGCAC
TATGGTGGAGAGGTCAGCAGTGTCTGTCGCTTCACTGAGGAGCGAACTGGAGGCACTGGGCCCA
GTAAAACCGATTCTGGAGGAGCTGGGACGGCAACTTCAAAACTCCCGAAGGGGACCTGACCATG
TCTTGAACTTGGATCGTCCTGCCCAAGGTCCCTGTCCTCGATGTGCCAGCCAGGGGCAGCAGTT
ATCCACGGAGTCCCTACAGCAGCTGCTGGAACGTGCGCTGACCCCACTGGTGGACGAAGTGAAG
CAGAAGGGTCTGGCTCCTGCCTGCCCCAGTTGCCAGAGGCTACACAAGAAGATTCTGCCCAGTC
CAGTAAGCCCAGCGGCGCCTACACTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAAC
ACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGCTGGCCCAAGACGAAGCCGTTCGGGCCAA
GAACCTACTGCTGACGGACAAGATGAAGCCGGAGTGAGGACGGAGGCAGAGGGCATGGGAGGAG
GGGAGAAGGTGGCCACTTTGGACTATATGCATTTGAAGATGTGTTCCCTCCACGACCAACTCAG
CCACCTGCCACTTGAGGGGTCCACAGGGGCAATGGGGGGAGGAAGCACTGGAGGGGCTCCCCCT
AAACGTGGGGGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGCATGAATTCTGA

hide sequence

RefSeq Acc Id:

XM_063284121 ⟹ XP_063140191

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284124 ⟹ XP_063140194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284130 ⟹ XP_063140200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,563,997 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284135 ⟹ XP_063140205

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,850 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284139 ⟹ XP_063140209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,850 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284143 ⟹ XP_063140213

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284148 ⟹ XP_063140218

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,790 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284150 ⟹ XP_063140220

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,850 - 104,578,147 (+)	NCBI

RefSeq Acc Id:

XM_063284153 ⟹ XP_063140223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,550,822 - 104,578,147 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001424373	(Get FASTA)	NCBI Sequence Viewer
	NP_001424374	(Get FASTA)	NCBI Sequence Viewer
	NP_001424375	(Get FASTA)	NCBI Sequence Viewer
	NP_001424376	(Get FASTA)	NCBI Sequence Viewer
	NP_001424377	(Get FASTA)	NCBI Sequence Viewer
	NP_001424378	(Get FASTA)	NCBI Sequence Viewer
	NP_001424379	(Get FASTA)	NCBI Sequence Viewer
	NP_001424380	(Get FASTA)	NCBI Sequence Viewer
	NP_001424381	(Get FASTA)	NCBI Sequence Viewer
	NP_001424382	(Get FASTA)	NCBI Sequence Viewer
	NP_001424383	(Get FASTA)	NCBI Sequence Viewer
	NP_001424384	(Get FASTA)	NCBI Sequence Viewer
	NP_001424385	(Get FASTA)	NCBI Sequence Viewer
	NP_001424387	(Get FASTA)	NCBI Sequence Viewer
	NP_954519	(Get FASTA)	NCBI Sequence Viewer
	XP_006229076	(Get FASTA)	NCBI Sequence Viewer
	XP_006229077	(Get FASTA)	NCBI Sequence Viewer
	XP_006229078	(Get FASTA)	NCBI Sequence Viewer
	XP_006229079	(Get FASTA)	NCBI Sequence Viewer
	XP_006229080	(Get FASTA)	NCBI Sequence Viewer
	XP_006229081	(Get FASTA)	NCBI Sequence Viewer
	XP_006229082	(Get FASTA)	NCBI Sequence Viewer
	XP_017444415	(Get FASTA)	NCBI Sequence Viewer
	XP_063140191	(Get FASTA)	NCBI Sequence Viewer
	XP_063140194	(Get FASTA)	NCBI Sequence Viewer
	XP_063140200	(Get FASTA)	NCBI Sequence Viewer
	XP_063140205	(Get FASTA)	NCBI Sequence Viewer
	XP_063140209	(Get FASTA)	NCBI Sequence Viewer
	XP_063140213	(Get FASTA)	NCBI Sequence Viewer
	XP_063140218	(Get FASTA)	NCBI Sequence Viewer
	XP_063140220	(Get FASTA)	NCBI Sequence Viewer
	XP_063140223	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAQ24209	(Get FASTA)	NCBI Sequence Viewer
	EDM07439	(Get FASTA)	NCBI Sequence Viewer
	EDM07440	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000043218
	ENSRNOP00000043218.4
	ENSRNOP00000087658
GenBank Protein	P60531	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_954519 ⟸ NM_199088

- UniProtKB:

P60531 (UniProtKB/Swiss-Prot), A6JAU4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKG
PRPDVLTQENCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQK
LEAGLSRHGLGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGL
EELRREVSSLAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRAD
ELCTMVERSAVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQ
GQQLSTESLQQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILELERQALAKHVRAEALSSTL
RLAQDEAVRAKNLLLTDKMKPEEKVATLDYMHLKMCSLHDQLSHLPLEGSTGAMGGGSTGGAPP
KRGGPGSEQ

hide sequence

RefSeq Acc Id:

XP_006229078 ⟸ XM_006229016

- Peptide Label:

isoform X4

- Sequence:

show sequence

MDHQLRARREGCKSLTEAELQEKKTNGVEPRMSHEPMHWCLNLKRSSACTNVSLLNLAAMEPDS
SGTDSTTEDSGPLALPGPPASPTTPWAPEDPDITELLSGVNSGLVRAKDSITSLKEKTTRVNQH
VQTLQSECSVLSENLERRRQEAEELEGYCSQLKGPRPDVLTQENCRKVTRSVEDAEIKTNVLKQ
NSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRHGLGPTTPIQGCSGPPGSPEEPP
RPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGLEELRREVSSLAARWHQEEGAVQEALRLLGG
LGGRLDGFLGQWERAQREQAQSARGLQELRGRADELCTMVERSAVSVASLRSELEALGPVKPIL
EELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQGQQLSTESLQQLLERALTPLVDEVKQKGLA
PACPSCQRLHKKILPSPVSPAAPTLLSPGAGAPGLGQTRQGRGPELHPSAGPRRSRSGQEPTAD
GQDEAGVRTEAEGMGGGEKVATLDYMHLKMCSLHDQLSHLPLEGSTGAMGGGSTGGAPPKRGGP
GSEQ

hide sequence

RefSeq Acc Id:

XP_006229076 ⟸ XM_006229014

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKG
PRPDVLTQENCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQK
LEAGLSRHGLGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGL
EELRREVSSLAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRAD
ELCTMVERSAVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQ
GQQLSTESLQQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILPSPVSPAAPTLLSPGAGAPG
LGQTRQGRGPELHPSAGPRRSRSGQEPTADGQDEAGVRTEAEGMGGGEKVATLDYMHLKMCSLH
DQLSHLPLEGSTGAMGGGSTGGAPPKRGGPGSEQ

hide sequence

RefSeq Acc Id:

XP_006229077 ⟸ XM_006229015

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKE
NCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRHG
LGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGLEELRREVSS
LAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRADELCTMVERS
AVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQGQQLSTESL
QQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILPSPVSPAAPTLLSPGAGAPGLGQTRQGRG
PELHPSAGPRRSRSGQEPTADGQDEAGVRTEAEGMGGGEKVATLDYMHLKMCSLHDQLSHLPLE
GSTGAMGGGSTGGAPPKRGGPGSEQ

hide sequence

RefSeq Acc Id:

XP_006229079 ⟸ XM_006229017

- Peptide Label:

isoform X5

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKE
NCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRHG
LGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGLEELRREVSS
LAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRADELCTMVERS
AVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQGQQLSTESL
QQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILELERQALAKHVRAEALSSTLRLAQDEAVR
AKNLLLTDKMKPEEKVATLDYMHLKMCSLHDQLSHLPLEGSTGAMGGGSTGGAPPKRGGPGSEQ

hide sequence

RefSeq Acc Id:

XP_006229081 ⟸ XM_006229019

- Peptide Label:

isoform X15

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKG
PRPDVLTQENCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQK
LEAGLSRHGLGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGL
EELRREVSSLAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRAD
ELCTMVERSAVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQ
GQQLSTESLQQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILELERQALAKHVRAEALSSTL
RLAQDEAVRAKNLLLTDKMKPE

hide sequence

RefSeq Acc Id:

XP_006229080 ⟸ XM_006229018

- Peptide Label:

isoform X6

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKG
PRPDVLTQENCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQK
LEAGLSRHGLGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGL
EELRREVSSLAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRAD
ELCTMVERSAVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQ
GQQLSTESLQQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILPSPVSPAAPTLLSPGAGAPG
LGQTRQGRGPELHPSAGPRRSRSGQEPTADGQDEAGGEGGHFGLYAFEDVFPPRPTQPPAT

hide sequence

RefSeq Acc Id:

XP_006229082 ⟸ XM_006229020

- Peptide Label:

isoform X16

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKE
NCRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRHG
LGPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGLEELRREVSS
LAARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRADELCTMVERS
AVSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQGQQLSTESL
QQLLERALTPLVDEVKQKGLAPACPSCQRLHKKILELERQALAKHVRAEALSSTLRLAQDEAVR
AKNLLLTDKMKPE

hide sequence

RefSeq Acc Id:

XP_017444415 ⟸ XM_017588926

- Peptide Label:

isoform X3

- Sequence:

show sequence

MASVVVKTIWQSKEIHEAGDPPAGVESRAQLVPEAPGGVTSPAKGITKKKKAVSFHGVEPRMSH
EPMHWCLNLKRSSACTNVSLLNLAAMEPDSSGTDSTTEDSGPLALPGPPASPTTPWAPEDPDIT
ELLSGVNSGLVRAKDSITSLKEKTTRVNQHVQTLQSECSVLSENLERRRQEAEELEGYCSQLKN
CRKVTRSVEDAEIKTNVLKQNSALLEEKLRYLQQQLQDETPRRQEAELQELEQKLEAGLSRHGL
GPTTPIQGCSGPPGSPEEPPRPRGLPSNGWGMAIRAGEGPSLSEQELQKVSSGLEELRREVSSL
AARWHQEEGAVQEALRLLGGLGGRLDGFLGQWERAQREQAQSARGLQELRGRADELCTMVERSA
VSVASLRSELEALGPVKPILEELGRQLQNSRRGPDHVLNLDRPAQGPCPRCASQGQQLSTESLQ
QLLERALTPLVDEVKQKGLAPACPSCQRLHKKILPSPVSPAAPTLLSPGAGAPGLGQTRQGRGP
ELHPSAGPRRSRSGQEPTADGQDEAGVRTEAEGMGGGEKVATLDYMHLKMCSLHDQLSHLPLEG
STGAMGGGSTGGAPPKRGGPGSEQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000043218 ⟸ ENSRNOT00000049584

Ensembl Acc Id:

ENSRNOP00000087658 ⟸ ENSRNOT00000117467

RefSeq Acc Id:	XP_063140218 ⟸ XM_063284148
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063140191 ⟸ XM_063284121
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063140194 ⟸ XM_063284124
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063140213 ⟸ XM_063284143
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063140223 ⟸ XM_063284153
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063140205 ⟸ XM_063284135
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063140220 ⟸ XM_063284150
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_063140209 ⟸ XM_063284139
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063140200 ⟸ XM_063284130
- Peptide Label:	isoform X9

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P60531-F1-model_v2	AlphaFold	P60531	1-585	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690014

Promoter ID:

EPDNEW_R539

Type:

initiation region

Name:

Tsks_1

Description:

testis-specific serine kinase substrate

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	100,939,847 - 100,939,907	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727784	AgrOrtholog
BioCyc Gene	G2FUF-59740	BioCyc
Ensembl Genes	ENSRNOG00000020443	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000049584	ENTREZGENE
	ENSRNOT00000049584.4	UniProtKB/Swiss-Prot
	ENSRNOT00000117467	ENTREZGENE
InterPro	TSKS	UniProtKB/Swiss-Prot
KEGG Report	rno:292890	UniProtKB/Swiss-Prot
NCBI Gene	292890	ENTREZGENE
PANTHER	PTHR14351	UniProtKB/Swiss-Prot
	TESTIS-SPECIFIC SERINE KINASE SUBSTRATE	UniProtKB/Swiss-Prot
Pfam	TSKS	UniProtKB/Swiss-Prot
PhenoGen	Tsks	PhenoGen
RatGTEx	ENSRNOG00000020443	RatGTEx
UniProt	A0A0H2UHX2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A8E5	ENTREZGENE, UniProtKB/TrEMBL
	A6JAU4	ENTREZGENE, UniProtKB/TrEMBL
	P60531	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2009-12-16	Tsks	testis-specific serine kinase substrate	Stk22s1	serine/threonine kinase 22 substrate 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-08	Stk22s1	serine/threonine kinase 22 substrate 1			Symbol and Name status set to approved	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar