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Gene: Adgrf5 (adhesion G protein-coupled receptor F5) Rattus norvegicus

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Symbol:

Adgrf5

Name:

adhesion G protein-coupled receptor F5

RGD ID:

621679

Description:

Predicted to enable G protein-coupled receptor activity. Predicted to be involved in several processes, including adenylate cyclase-activating G protein-coupled receptor signaling pathway; glucose homeostasis; and surfactant homeostasis. Predicted to act upstream of or within several processes, including glomerular filtration; negative regulation of macrophage activation; and pharyngeal arch artery morphogenesis. Predicted to be located in apical part of cell; cell surface; and cytoplasmic vesicle. Predicted to be active in plasma membrane. Orthologous to human ADGRF5 (adhesion G protein-coupled receptor F5); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

G protein-coupled hepta-helical receptor Ig-Hepta; G protein-coupled receptor 116; G-protein coupled hepta-helical receptor Ig-hepta; G-protein coupled receptor 116; Gpr116; Gprhep; Ig-Hepta; probable G-protein coupled receptor 116

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	25,014,861 - 25,128,045 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	25,018,277 - 25,121,237 (-)	Ensembl				GRCr8
mRatBN7.2	9	17,517,596 - 17,624,107 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	17,520,009 - 17,623,968 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	26,112,113 - 26,215,041 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	31,186,682 - 31,289,610 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	29,475,906 - 29,578,852 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	9	28,866,934 - 28,969,709 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	9	24,658,275 - 24,761,052 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	9	24,734,592 - 24,837,379 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	9	26,696,903 - 26,799,688 (-)	NCBI		F344_StmMcwi
Rnor_6.0	9	20,091,121 - 20,195,706 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	20,091,099 - 20,195,566 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	18,967,333 - 19,071,668 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	13,217,956 - 13,323,415 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	15,237,160 - 15,339,123 (-)	NCBI		Celera
RGSC_v3.1	9	13,215,277 - 13,320,737 (-)	NCBI
Cytogenetic Map	9	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

2,4-dinitrotoluene (EXP)

2-palmitoylglycerol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

8-Br-cAMP (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

amphetamine (EXP)

arsenous acid (ISO)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

ciguatoxin CTX1B (ISO)

clothianidin (ISO)

cobalt dichloride (ISO)

copper atom (EXP)

copper(0) (EXP)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

doxorubicin (ISO)

endosulfan (EXP)

fipronil (EXP)

genistein (EXP)

gentamycin (EXP)

isoprenaline (ISO)

levonorgestrel (ISO)

methamphetamine (ISO)

N,N-diethyl-m-toluamide (EXP)

N-Nitrosopyrrolidine (ISO)

nevirapine (EXP)

okadaic acid (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (ISO)

permethrin (EXP)

rotenone (EXP)

testosterone undecanoate (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

toluene (EXP)

topotecan (EXP)

triadimefon (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

trimellitic anhydride (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adenylate cyclase-activating G protein-coupled receptor signaling pathway (IBA)

cell surface receptor signaling pathway (IEA)

energy reserve metabolic process (IBA,ISO)

erythrocyte development (ISO)

fat cell differentiation (ISO)

G protein-coupled receptor signaling pathway (IEA)

glomerular filtration (ISO)

glucose homeostasis (IBA,ISO)

negative regulation of macrophage activation (ISO)

pharyngeal arch artery morphogenesis (ISO)

positive regulation of phospholipid biosynthetic process (ISO)

regulation of lipid metabolic process (ISO)

signal transduction (IEA)

surfactant homeostasis (IBA,ISO)

Cellular Component

apical part of cell (ISO)

cell surface (ISO)

cytoplasmic vesicle (ISO)

membrane (IEA)

plasma membrane (IBA,IEA)

Molecular Function

G protein-coupled receptor activity (IBA,IEA)

protein binding (ISO)

transmembrane signaling receptor activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Ig-hepta, a novel member of the G protein-coupled hepta-helical receptor (GPCR) family that has immunoglobulin-like repeats in a long N-terminal extracellular domain and defines a new subfamily of GPCRs.	Abe J, etal., J Biol Chem 1999 Jul 9;274(28):19957-64.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11973329	PMID:22971422	PMID:23590306	PMID:23684610	PMID:25778400	PMID:28806758

Genomics

Comparative Map Data

Adgrf5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	25,014,861 - 25,128,045 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	25,018,277 - 25,121,237 (-)	Ensembl				GRCr8
mRatBN7.2	9	17,517,596 - 17,624,107 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	17,520,009 - 17,623,968 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	26,112,113 - 26,215,041 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	31,186,682 - 31,289,610 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	29,475,906 - 29,578,852 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	9	28,866,934 - 28,969,709 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	9	24,658,275 - 24,761,052 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	9	24,734,592 - 24,837,379 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	9	26,696,903 - 26,799,688 (-)	NCBI		F344_StmMcwi
Rnor_6.0	9	20,091,121 - 20,195,706 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	20,091,099 - 20,195,566 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	18,967,333 - 19,071,668 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	13,217,956 - 13,323,415 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	15,237,160 - 15,339,123 (-)	NCBI		Celera
RGSC_v3.1	9	13,215,277 - 13,320,737 (-)	NCBI
Cytogenetic Map	9	q13	NCBI

ADGRF5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	46,852,522 - 46,954,939 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	46,852,310 - 46,956,392 (-)	Ensembl			hg38	GRCh38
GRCh37	6	46,820,259 - 46,922,676 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	46,928,201 - 47,030,634 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	46,928,297 - 46,990,825	NCBI
Celera	6	48,372,598 - 48,475,024 (-)	NCBI		Celera
Cytogenetic Map	6	p12.3	NCBI
HuRef	6	46,543,478 - 46,645,785 (-)	NCBI		HuRef
CHM1_1	6	46,823,487 - 46,925,912 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	46,689,996 - 46,792,404 (-)	NCBI		T2T-CHM13v2.0

Adgrf5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	43,671,225 - 43,770,448 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	43,671,342 - 43,770,448 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	43,360,329 - 43,459,557 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	43,360,451 - 43,459,557 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	43,526,415 - 43,596,506 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	42,825,075 - 42,924,198 (+)	NCBI		MGSCv36	mm8
Celera	17	46,814,258 - 46,884,453 (+)	NCBI		Celera
Cytogenetic Map	17	B3	NCBI
cM Map	17	19.73	NCBI

Adgrf5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	11,639,891 - 11,688,257 (-)	Ensembl
ChiLan1.0	NW_004955437	11,639,555 - 11,710,362 (-)	NCBI	ChiLan1.0	ChiLan1.0

ADGRF5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	61,350,720 - 61,452,916 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	57,216,959 - 57,319,166 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	46,438,128 - 46,540,325 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	47,703,158 - 47,805,347 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	47,700,570 - 47,772,510 (-)	Ensembl			panPan2	panpan1.1

ADGRF5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	15,013,567 - 15,115,889 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	15,006,949 - 15,086,116 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	15,045,001 - 15,147,394 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	15,510,094 - 15,612,365 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	15,512,606 - 15,612,218 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	15,024,852 - 15,127,029 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	15,117,916 - 15,219,946 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	15,263,867 - 15,336,692 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Adgrf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	50,457,310 - 50,546,121 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	13,414,058 - 13,504,509 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	13,414,087 - 13,503,926 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ADGRF5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	41,640,258 - 41,769,232 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	41,640,256 - 41,769,422 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	48,301,437 - 48,429,345 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ADGRF5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	25,323,613 - 25,427,370 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	25,356,427 - 25,430,061 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	46,866,043 - 46,976,173 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Adgrf5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	13,778,170 - 13,843,723 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	13,778,573 - 13,843,931 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Adgrf5
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	86,383,257 - 86,479,562 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Adgrf5
1111 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	60
Count of miRNA genes:	50
Interacting mature miRNAs:	51
Transcripts:	ENSRNOT00000015223
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	1	31250552	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	41763315	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	6714888	29567695	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	21031430	49025574	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat

Markers in Region

D9Got26

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	17,584,551 - 17,584,707 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	20,156,566 - 20,156,721	NCBI	Rnor6.0
Rnor_5.0	9	19,032,778 - 19,032,933	UniSTS	Rnor5.0
RGSC_v3.4	9	13,283,515 - 13,283,671	RGD	RGSC3.4
RGSC_v3.4	9	13,283,516 - 13,283,671	UniSTS	RGSC3.4
Celera	9	15,300,501 - 15,300,656	UniSTS
RGSC_v3.1	9	13,280,838 - 13,280,993	RGD
RH 3.4 Map	9	125.9	UniSTS
RH 3.4 Map	9	125.9	RGD
RH 2.0 Map	9	0.0	RGD
Cytogenetic Map	9	q12	UniSTS

D9Got23

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	17,565,176 - 17,565,422 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	20,138,702 - 20,138,947	NCBI	Rnor6.0
Rnor_5.0	9	19,014,914 - 19,015,159	UniSTS	Rnor5.0
RGSC_v3.4	9	13,262,121 - 13,262,367	RGD	RGSC3.4
RGSC_v3.4	9	13,262,122 - 13,262,367	UniSTS	RGSC3.4
Celera	9	15,281,341 - 15,281,588	UniSTS
RGSC_v3.1	9	13,259,444 - 13,259,689	RGD
RH 3.4 Map	9	105.3	UniSTS
RH 3.4 Map	9	105.3	RGD
RH 2.0 Map	9	99.8	RGD
Cytogenetic Map	9	q12	UniSTS

D9Wox36

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	17,521,251 - 17,521,491 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	20,094,776 - 20,095,015	NCBI	Rnor6.0
Rnor_5.0	9	18,970,988 - 18,971,227	UniSTS	Rnor5.0
RGSC_v3.4	9	13,218,196 - 13,218,435	UniSTS	RGSC3.4
Celera	9	15,237,400 - 15,237,639	UniSTS
Cytogenetic Map	9	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	51	59	6	315	151	11	143	81	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_139110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB019120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC119458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015223 ⟹ ENSRNOP00000015223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	25,018,277 - 25,121,237 (-)	Ensembl
mRatBN7.2 Ensembl	9	17,521,012 - 17,623,968 (-)	Ensembl
Rnor_6.0 Ensembl	9	20,094,536 - 20,195,566 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082904 ⟹ ENSRNOP00000071238

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	25,018,277 - 25,121,237 (-)	Ensembl
mRatBN7.2 Ensembl	9	17,521,012 - 17,623,968 (-)	Ensembl
Rnor_6.0 Ensembl	9	20,091,099 - 20,154,077 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118179 ⟹ ENSRNOP00000096657

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	25,019,722 - 25,121,237 (-)	Ensembl
mRatBN7.2 Ensembl	9	17,520,009 - 17,623,968 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000135806 ⟹ ENSRNOP00000102120

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	25,018,277 - 25,121,237 (-)	Ensembl

RefSeq Acc Id:

NM_139110 ⟹ NP_620810

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,018,277 - 25,121,237 (-)	NCBI
mRatBN7.2	9	17,521,012 - 17,623,968 (-)	NCBI
Dahl_SR_JrHsd	9	28,866,934 - 28,969,709 (-)	NCBI
Lyon_Normotensive	9	24,658,275 - 24,761,052 (-)	NCBI
Lyon_Hypertensive	9	24,734,592 - 24,837,379 (-)	NCBI
F344_StmMcwi	9	26,696,903 - 26,799,688 (-)	NCBI
Rnor_6.0	9	20,094,536 - 20,195,566 (-)	NCBI
Rnor_5.0	9	18,967,333 - 19,071,668 (-)	NCBI
RGSC_v3.4	9	13,217,956 - 13,323,415 (-)	RGD
Celera	9	15,237,160 - 15,339,123 (-)	RGD

Sequence:

show sequence

TAAAGTCTGATCTACTGAAACTCTACCCTCCTCAGGCTGCCTGAATGAATGGGACACCTTTAAG
TTTCACCTCACCTCCGAGGTCTGCAGTGCGCTCTTCTATTTTACCACACAGAAGTAAATCTGAG
GAGGCTGCCCAGTGCTGAAGAGAAAGGCAAAGCCACTCAAACCTGAAGAAATGAAATCGTCAAG
GACTGTCACGCTCTACTTTGTGCTTATTGTGATTTGTTCCTCAGAAGCTACATGGAGCAGGCCA
GCAGAGCCCATTGTCCATCCTTTGATTCTCCAAGAACATGAACTAGCAGGGGAAGAGCTACTGA
GGCCAAAAAGAGCAGTTGCAGTGGGTGGTCCTGTGGCAGAAGAATACACCGTGGATGTTGAGAT
CAGTTTTGAAAATGTCTCCTTCCTGGAGTCCATCAGAGCTCACTTAAACAGCCTCCGTTTTCCA
GTTCAGGGGAACGGCACTGACATTTTGAGTATGGCAATGACTACAGTCTGCACTCCTACTGGGA
ATGACCTCTTGTGCTTCTGCGAGAAAGGCTACCAGTGGCCTGAGGAAAGGTGTCTCTCCTCTCT
CACTTGTCAAGAGCATGACAGCGCCCTGCCAGGCCGATACTGCAATTGTCTGAAAGGACTTCCT
CCCCAAGGACCTTTCTGCCAGCTCCCAGAAACATACATTACCTTAAAAATCAAAGTCAGACTGA
ACATAGGATTTCAAGAAGACCTAGAGAACACATCCTCTGCCCTCTATAGGTCCTACAAGACTGA
TCTGGAAAGAGCGTTCCGAGCGGGTTACAGAACTTTACCAGGATTCAGATCGGTGACTGTGACA
CAGTTCACCAAGGGCAGCGTGGTTGTGGACTACATAGTCGAGGTTGCATCGGCACCACTGCCTG
GATCAATTCATAAAGCCAATGAGCAAGTCATACAGAACCTCAACCAGACTTACAAAATGGACTA
CAACTCCTTCCAAGGAACACCAAGCAATGAAACAAAGTTCACTGTGACACCAGAGTTCATCTTT
GAAGGAGACAATGTAACTCTGGAATGCGAAAGTGAATTCGTGTCCTCCAACACATCTTGGTTCT
ATGGAGAAAAACGGTCTGACATCCAGAACAGTGACAAATTCTCCATTCACACCTCAATCATCAA
CAATATAAGCCTGGTCACCCGCCTCACTATTTTCAACTTCACACAGCATGATGCAGGCTTATAT
GGTTGCAATGTGACACTGGATATTTTTGAATATGGGACAGTCAGAAAATTAGATGTCACTCCCA
TCCGGATTTTGGCCAAGGAAGAGAGAAAGGTGGTGTGTGACAATAACCCTATATCGTTGAACTG
CTGCAGCGAGAATATCGCGAACTGGAGCAGAATCGAGTGGAAACAGGAGGGGAAAATAAACATT
GAAGGGACCCCAGAAACAGACCTAGAGTCTAGCTGCAGCACTTATACACTCAAGGCAGATGGAA
CCCAGTGTCCCAGTGGTTCTTCTGGAACAACAGTCATCTACACGTGTGAGTTCGTCAGCGTCTA
CGGAGCCAAAGGCAGTAAGAACATAGCCGTGACCTTCACCTCTGTAGCCAACCTAACAATAACC
CCGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACTTGCCTCAGCGATGTGAGTA
GCTTTGATGAGGTGTACTGGAACACTTCCGCTGGTATTAAAATCCATCCAAGGTTTTATACCAT
GAGGAGGTATCGGGATGGAGCAGAGTCGGTGCTGACGGTGAAGACCTCCACCAGAGAGTGGAAC
GGAACCTACCACTGCATATTTAGATATAAGAATTCATACAGCATAGCCACCAAAGATGTCACTG
TTCACCCTCTGCCTCTGGAGTCAGACATCATGATGGATCCTTTGGAAGCCAGTGGTCTGTGCAC
CAGTTCCCATCAGTTCAAGTGCTGCATAGAAGAGAACGATGGGGAAGAGTACATTGTGACTTTC
CACGTGGATTCCTCATCCTTTCCTGCTGAAAGAGAAGTTATTGGCAAGCAGGCATGCTACACAT
ACAGTCTCCCAGGAAAGTTACCATCACGGTGTCCCAAAGACATTGACGTGTTCTGCCACTTTAC
CAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTTACCCTTGTTCCAGGGAAGAAT
ATCACATGCCAGGATCCCATCATAGGTATTGGGGAACCTGGGAAAGTCATCCAGAAGCTGTGCC
AGTTTGCAGGTGTTTCTAGAAGCCCTGGACAGACCATTGGTGGAACCGTCACTTATAAATGTGT
AGGCTCCCAGTGGAAGGAGGAGACAAGGGCCTGCATATCAGCCCCAATCAATGGTTTGCTCCAG
TTGGCCAAGGCTTTGATCAAGAGCCCCTCCCAGGATCAGAAGCTCCCTAAATACCTGCGGGACC
TTTCTGTTAGCACTGGGAAGGAAGAACAGGATATACGCTCATCGCCCGGGAGCCTGGGAGCCAT
CATCAGCATCCTTGATTTGCTTTCAACAGTTCCCACTCAAGTGAATTCAGAAATGATGAGGGAT
ATACTTGCTACCATTAATGTCATCTTAGACAAGTCCACCTTGAACTCCTGGGAGAAGTTACTAC
AGCAACAGAGCAACCAGAGCTCTCAGTTCCTGCAGTCAGTGGAGAGGTTTTCCAAAGCGCTCGA
GCTGGGAGACAGCACCCCTCCCTTCCTCTTCCACCCTAATGTTCAGATGAAGAGCATGGTGATA
AAACGTGGCCACGCCCAAATGTACCAACAGAAATTTGTCTTCACAGACTCTGACCTATGGGGTG
ATGTAGCCATTGATGAGTGTCAGCTGGGAAGCTTGCAGCCTGATTCATCGATCGTTACTGTGGC
TTTCCCAACTCTCAAAGCCATCCTGGCCCAGGATGGACAGAGAAAGACACCCTCCAACAGCCTA
GTAATGACCACCACTGTCAGCCATAATATCGTCAAGCCTTTTAGGATTTCTATGACATTCAAGA
ACAACCATCGTTCGGGTGGCAAGCCACAGTGTGTCTTCTGGAACTTCAGCCTTGCCAATAATAC
AGGGGGCTGGGATAGCAGTGGGTGCACTGTGGAAGATGATGGTAGGGACAATAGGGACAGAGTC
TTCTGCAAGTGTAACCACCTGACGTCATTCTCCATTCTCATGTCCCCAGACTCCCCAGACCCAG
GATCTCTTTTAAAAATACTTCTGGATATCATTTCTTACATCGGGTTGGGCTTTTCCATAGTCAG
CTTAGCTGCCTGTCTAGTTGTGGAAGCCATGGTGTGGAAATCAGTGACCAAGAACCGAACTTCC
TATATGCGCCACATCTGCATCGTCAACATTGCCCTTTGCCTTCTGATTGCTGACATCTGGTTCA
TTGTGGCTGGTGCTATCCACGATGGGCATTACCCACTCAACGAAACAGCCTGTGTGGCCGCCAC
ATTCTTCATTCACTTCTTCTACCTCAGTGTCTTCTTCTGGATGCTAACTCTGGGCCTCATGCTC
TTCTACCGGCTGATTTTCATTCTACATGACGCGAGCAAGTCCACGCAGAAAGCCATTGCCTTTT
CTCTAGGCTATGGCTGTCCACTCATTATCTCATCCATCACAGTGGGGGTTACACAGCCACAGGA
AGTTTACATGAGGAAGAATGCATGTTGGCTCAACTGGGAGGACACCAGAGCACTGCTGGCTTTT
GCTATCCCAGCGTTGATTATTGTGGTGGTGAACGTGAGCATCACAGTTGTGGTCATCACCAAGA
TCCTAAGGCCCTCCGTCGGAGACAAGCCAGGCAAGCAGGAAAAGAGCAGCCTATTCCAGATCAG
CAAGAGCATTGGAGTCCTCACGCCACTCTTGGGGCTCACTTGGGGTTTTGGTCTGGCCACAGTG
ATCCAGGGGAGCAATGCTGTGTTCCACATCATATTTACTCTCCTCAATGCCTTTCAGGGGCTCT
TCATTTTGCTCTTTGGCTGCCTCTGGGATCAGAAGGTACAGGAAGCTTTGCTGCATAAGTTTTC
ATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAACATCCTTAGGTTCATCAACACCTGTGTTT
TCGATGAGTTCTCCGATATCCCGAAGATTTAATAATCTTTTTGGTAAAACAGGAACATATAACG
TTTCCACCCCAGAGACAACCAGCTCATCCGTGGAAAATTCCTCTAGTGCTTACTCATTGCTCAA
CTAGGACCAGATAATGCCAAATTCACAGGAGCTCTCAGAAATAGGGCCCCTGCCAAGAAAAGGG
ACCCATATCCAAATCTATGGGTAAAGTGTTCTCTCTGCAGACTTCTGGGAGCAGATGCTGAAGA
GACTCTTTGAATAGAGAAGATGCTTTCTTTTGTAAAGACAGACTAAATGTTTAATTTTGCTCCC
ACCCCTATCCCTTGTGTAATGCCAAATATGTATAGTATTTAAAAGAACCCTCCCACAAGGCTCA
ACCTTTCTCTGTGTATTGTAAAATAGAAAATTGAGAGTTTTACACACACACACACACACACACA
CACACACACACACACACACACACACCCCATTGGCTACAAAGATAAAAGCTGATTGAAACAGTAA
GTAAAAAGTGAGTATCCAGAATTTCAGTGAATTCAAGAAAGGAAGGAGTGGGGAGGGGAGAGAA
AGGATGATATAATGGAAGGTAGGAATGAAGGGAAGGAGGGAGGGGTGAGATAGGAAGGAAGGAA
GGATGATGTAGAAAACGTTAGGGAGCACATCAATTTCCACAATTGTGATCTAATATGGCTACTC
ATCTACCACAGCCCTGGGAATGAAATATATGGCTTAAAAAAGGAAAATGAGATGAAACCATGGG
GAATGTAGGTAAGTTTCTGATCTTTCCCTGGCTAAAAGGATAAAAGACAGAGGAGGGAAAGTAG
AAAAGAAAGTAGGAGGGAAAGAT

hide sequence

RefSeq Acc Id:

XM_008766832 ⟹ XP_008765054

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,093,161 (-)	NCBI
mRatBN7.2	9	17,517,596 - 17,595,904 (-)	NCBI
Rnor_6.0	9	20,091,121 - 20,168,004 (-)	NCBI

Sequence:

show sequence

TCTTTCCACTTGGAGGAGAGGCTTCTCAATAAGAGGACCTGAAGGACTTCCTATGGGCGTGAGG
GAAATCGCACACGCCATCCGGGGAAGTGGACCAGGAAATCGCTTCTTGTTTTTCAAACAGCAAC
GAGGCTCTAGGGGATGGCTCTGTGAGGCTTGGAGGAGTGCAGCTCTGGGAGGCAAAAGTTGAGC
AAAGGAGTGGCCAGACCTGTTCATCATGATGCCTGCCCTGCTGCCTCCTGACTGTCTGTGAGCC
CCCTAAGAAGGCTGCGGGGCCAATGGCCCCGTAGTGAAAGACAGAGAAGTTTCTAGGCATCTGT
TGAGAGCAGGCGCTTGCTTGGAGACAGCAACGGTGGTGGACAGGCAAAGCCACTCAAACCTGAA
GAAATGAAATCGTCAAGGACTGTCACGCTCTACTTTGTGCTTATTGTGATTTGTTCCTCAGAAG
CTACATGGAGCAGGCCAGCAGAGCCCATTGTCCATCCTTTGATTCTCCAAGAACATGAACTAGC
AGGGGAAGAGCTACTGAGGCCAAAAAGAGCAGTTGCAGTGGGTGGTCCTGTGGCAGAAGAATAC
ACCGTGGATGTTGAGATCAGTTTTGAAAATGTCTCCTTCCTGGAGTCCATCAGAGCTCACTTAA
ACAGCCTCCGTTTTCCAGTTCAGGGGAACGGCACTGACATTTTGAGTATGGCAATGACTACAGT
CTGCACTCCTACTGGGAATGACCTCTTGTGCTTCTGCGAGAAAGGCTACCAGTGGCCTGAGGAA
AGGTGTCTCTCCTCTCTCACTTGTCAAGAGCATGACAGCGCCCTGCCAGGCCGATACTGCAATT
GTCTGAAAGGACTTCCTCCCCAAGGACCTTTCTGCCAGCTCCCAGAAACATACATTACCTTAAA
AATCAAAGTCAGACTGAACATAGGATTTCAAGAAGACCTAGAGAACACATCCTCTGCCCTCTAT
AGGTCCTACAAGACTGATCTGGAAAGAGCGTTCCGAGCGGGTTACAGAACTTTACCAGGATTCA
GATCGGTGACTGTGACACAGTTCACCAAGGGCAGCGTGGTTGTGGACTACATAGTCGAGGTTGC
ATCGGCACCACTGCCTGGATCAATTCATAAAGCCAATGAGCAAGTCATACAGAACCTCAACCAG
ACTTACAAAATGGACTACAACTCCTTCCAAGGAACACCAAGCAATGAAACAAAGTTCACTGTGA
CACCAGAGTTCATCTTTGAAGGAGACAATGTAACTCTGGAATGCGAAAGTGAATTCGTGTCCTC
CAACACATCTTGGTTCTATGGAGAAAAACGGTCTGACATCCAGAACAGTGACAAATTCTCCATT
CACACCTCAATCATCAACAATATAAGCCTGGTCACCCGCCTCACTATTTTCAACTTCACACAGC
ATGATGCAGGCTTATATGGTTGCAATGTGACACTGGATATTTTTGAATATGGGACAGTCAGAAA
ATTAGATGTCACTCCCATCCGGATTTTGGCCAAGGAAGAGAGAAAGGTGGTGTGTGACAATAAC
CCTATATCGTTGAACTGCTGCAGCGAGAATATCGCGAACTGGAGCAGAATCGAGTGGAAACAGG
AGGGGAAAATAAACATTGAAGGCCAGACCTCTAAGGACGAAGTACATTCAACAGGAAGAGGAAG
GGGAGATACAAGTGTGAACACAGGGACCCCAGAAACAGACCTAGAGTCTAGCTGCAGCACTTAT
ACACTCAAGGCAGATGGAACCCAGTGTCCCAGTGGTTCTTCTGGAACAACAGTCATCTACACAT
GTGAGTTCGTCAGCGTCTACGGAGCCAAAGGCAGTAAGAACATAGCCGTGACCTTCACCTCTGT
AGGAGATAATTCCAGCTACAAAGGGGAAGTGCCCGAGGCCCCAAGGCATGTGATGGAAGTGAGT
ACAGTTCAGAGCACCACCGGGAACAGACTAGAAACAAGTAAATCCCAGGAGCAGCAAGCCAACC
TAACAATAACCCCGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACTTGCCTCAG
CGATGTGAGTAGCTTTGATGAGGTGTACTGGAACACTTCCGCTGGTATTAAAATCCATCCAAGG
TTTTATACCATGAGGAGGTATCGGGATGGAGCAGAGTCGGTGCTGACGGTGAAGACCTCCACCA
GAGAGTGGAACGGAACCTACCACTGCATATTTAGATATAAGAATTCATACAGCATAGCCACCAA
AGATGTCACTGTTCACCCTCTGCCTCTGGAGTCAGACATCATGATGGATCCTTTGGAAGCCAGT
GGTCTGTGCACCAGTTCCCATCAGTTCAAGTGCTGCATAGAAGAGAACGATGGGGAAGAGTACA
TTGTGACTTTCCACGTGGATTCCTCATCCTTTCCTGCTGAAAGAGAAGTTATTGGCAAGCAGGC
ATGCTACACATACAGTCTCCCAGGAAAGTTACCATCACGGTGTCCCAAAGACATTGACGTGTTC
TGCCACTTTACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTTACCCTTGTTC
CAGGGAAGAATATCACATGCCAGGATCCCATCATAGGTATTGGGGAACCTGGGAAAGTCATCCA
GAAGCTGTGCCAGTTTGCAGGTGTTTCTAGAAGCCCTGGACAGACCATTGGTGGAACCGTCACT
TATAAATGTGTAGGCTCCCAGTGGAAGGAGGAGACAAGGGCCTGCATATCAGCCCCAATCAATG
GTTTGCTCCAGTTGGCCAAGGCTTTGATCAAGAGCCCCTCCCAGGATCAGAAGCTCCCTAAATA
CCTGCGGGACCTTTCTGTTAGCACTGGGAAGGAAGAACAGGATATACGCTCGTCGCCCGGGAGC
CTGGGAGCCATCATCAGCATCCTTGATTTGCTTTCAACAGTTCCCACTCAAGTGAATTCAGAAA
TGATGAGGGATATACTTGCTACCATTAATGTCATCTTAGACAAGTCCACCTTGAACTCCTGGGA
GAAGTTACTACAGCAACAGAGCAACCAGAGCTCTCAGTTCCTGCAGTCAGTGGAGAGGTTTTCC
AAAGCGCTCGAGCTGGGAGACAGCACCCCTCCCTTCCTCTTCCACCCTAATGTTCAGATGAAGA
GCATGGTGATAAAACGTGGCCACGCCCAAATGTACCAACAGAAATTTGTCTTCACAGACTCTGA
CCTATGGGGTGATGTAGCCATTGATGAGTGTCAGCTGGGAAGCTTGCAGCCTGATTCATCGATC
GTTACTGTGGCTTTCCCAACTCTCAAAGCCATCCTGGCCCAGGATGGACAGAGAAAGACACCCT
CCAACAGCCTAGTAATGACCACCACTGTCAGCCATAATATCGTCAAGCCTTTTAGGATTTCTAT
GACATTCAAGAACAACCATCGTTCGGGTGGCAAGCCACAGTGTGTCTTCTGGAACTTCAGCCTT
GCCAATAATACAGGGGGCTGGGATAGCAGTGGGTGCACTGTGGAAGATGATGGTAGGGACAATA
GGGACAGAGTCTTCTGCAAGTGTAACCACCTGACGTCATTCTCCATTCTCATGTCCCCAGACTC
CCCAGACCCAGGATCTCTTTTAAAAATACTTCTGGATATCATTTCTTACATCGGGTTGGGCTTT
TCCATAGTCAGCTTAGCTGCCTGTCTAGTTGTGGAAGCCATGGTGTGGAAATCAGTGACCAAGA
ACCGAACTTCCTATATGCGCCACATCTGCATCGTCAACATTGCCCTTTGCCTTCTGATTGCTGA
CATCTGGTTCATTGTGGCTGGTGCTATCCATGATGGGCATTACCCACTCAACGAAACAGCCTGT
GTGGCCGCCACATTCTTCATTCACTTCTTCTACCTCAGTGTCTTCTTCTGGATGCTAACTCTGG
GCCTCATGCTCTTCTACCGGCTGATTTTCATTCTACATGACGCGAGCAAGTCCACGCAGAAAGC
CATTGCCTTTTCTCTAGGCTATGGCTGTCCACTCATTATCTCATCCATCACAGTGGGGGTTACA
CAGCCACAGGAAGTTTACATGAGGAAGAATGCATGTTGGCTCAACTGGGAGGACACCAGAGCAC
TGCTGGCTTTTGCCATCCCAGCGTTGATTATTGTGGTGGTGAACGTGAGCATCACAGTTGTGGT
CATCACCAAGATCCTAAGGCCCTCCGTCGGAGACAAGCCAGGCAAGCAGGAGAAGAGCAGCCTA
TTCCAGATCAGCAAGAGCATTGGAGTCCTCACGCCACTCTTGGGGCTCACTTGGGGTTTTGGTC
TGGCCACAGTGATCCAGGGGAGCAATGCTGTGTTCCACATCATATTTACTCTCCTCAATGCCTT
TCAGGGGCTCTTCATTTTGCTCTTTGGCTGCCTCTGGGATCAGAAGGTACAGGAAGCTTTGCTG
CATAAGTTTTCATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAACATCCTTAGGTTCATCAA
CACCTGTGTTTTCGATGAGTTCTCCGATATCCCGAAGATTTAATAATCTTTTTGGTAAAACAGG
AACATATAACGTTTCCACCCCAGAGACAACCAGCTCATCCGTGGAAAATTCCTCTAGTGCTTAC
TCATTGCTCAACTAGGACCAGATAATGCCAAATTCACAGGAGCTCTCAGAAATAGGGCCCCTGC
CAAGAAAAGGGACCCATATCCAAATCTATGGGTAAAGTGTTCTCTCTGCAGACTTCTGGGAGCA
GATGCTGAAGAGACTCTTTGAATAGAGAAGATGCTTTCTTTTGTAAAGACAGACTAAATGTTTA
ATTTTGCTCCCACCCCTATCCCTTGTGTAATGCCAAATATGTATAGTATTTAAAAGAACCCTCC
CACAAGGCTCAACCTTTCTCTGTGTATTGTAAAATAGAAAATTGAGAGTTTTACACACACACAC
ACACACACACACACACACACACACACACACCCCATTGGCTACAAAGATAAAAGCTGATTGAAAC
AGTAAGTAAAAAGTGAGTATCCAGAATTTCAGTGAATTCAAGAAAGGAAGGAGTGGGGAGGGGA
GAGAAAGGATGATATAATGGAAGGTAGGAATGAAGGGAAGGAGGGAGGGGTGAGATAGGAAGGA
AGGAAGGATGATGTAGAAAACGTTAGGGAGCACATCAATTTCCACAATTGTGATCTAATATGGC
TACTCATCTACCACAGCCCTGGGAATGAAATATATGGCTTAAAAAAGGAAAATGAGATGAAACC
ATGGGGAATGTAGGTAAGTTTCTGATCTTTCCCTGGCTAAAAGGATAAAAGACAGAGGAGGGAA
AGTAGAAAAGAAAGTAGGAGGGAAAGATCACCATGAGGATGCTTGTGGCTGGATGATAATATTT
GCAAGCAGTGCACCCAAGGAGACACGGTTCTCCTCATGAAAAGGACATGTATGAATCTTTGTAT
GTCAAGGGTTGAGCAAAGCAGGGTGAACATGCAGAGCATGTATGACAGCCACTCTGTAAGATTC
AAGAAAGGTTTGTTTCTCATGATCTGTCAGAAAAGTATTGCATGCTAGTTCATTCAGCATTTTG
GAAGCAATGCATGCATATGCATATATTTTCTCCAGTAATTGACAAACTTGATCTACTGCACTGA
GATCAGAGTCCCACATCTTCCTTACATGTAACAGCTTTAACCAGGTACTCGCTGTGCATTGTAG
AATAGATTTAATAATTGTGTAGCGTGTACATTTTTATTATGCCTTTGTGACTTCATTGCAACCA
TGGCAACGATAGCCCTTGGTGTGCCATCCGTATTGCTATGCACTATCCTTTCCCAGCCATCTAA
GTTCCCAGGCCAATATACATTGAGAGTTTCTATGGCCTGATTTGTGTTTCTTGCAGCCACTTGG
AAGGCTTCTGGAGAAAAAGTAGCTGGCTCTTCTGTGCTCCCAGCCATGTTTTACTTTGATAAGG
AAACGGCAGATCCCCTACCCCCACCACCAAGAGTTAGATTGTGAATTTATACCTATGTGGTTTT
TGTATGTGTGTCTCGCAAAAATACAGATATTTATTAAAACTGCATCATCCATGTTAGAACTCCC
ATGCTCTGTACCCAAGAGCAAGCATGCATTCCATATCCAAGTGTGGTCTTAAAGGAACAGTGTC
AGTAAGGATGATGTCTTAAGTTAATTTCTCACTGCTGTAGTAAGGCATGCTGATGAAAACCTAC
AGGAAAAAAGGTTTGTTTTGGCTTACCCTTTGGATTACAGCCCATCATGACTGGGAAAGCACGG
CTGTAGGAGCATGAAGCCACCCCATCACACAGCCTCAGCAGTCTGGAAATAAAGAACAGGAAGT
GGGGTCAGACTGTGCAAACTCTAAGCCCTCCCACCCGGTGACATCTTTCCTCTAGCCAGGCTCC
ACCTCATAAAAGTTCTATAATCTTCCCAAACAGCACCATTAATTGCGGGCAGAGGGTTCTGATA
CATGGGCCTATGGGGGACATTTTACATTCAAACAACAACATACAGCAGACTCTTTAGGATGGAT
ATGCAGTGTTGGAGGTTTATGGAATGAGAGATTATGTGGGGTCCTTCCTTGGGAAGACAGGAGA
AGAGCCTGAGGTCTGATATTCAAAGTTTTAAGTACTTTCGGTCTCTTAGTTCTAAGCTTAAATT
CTACTTCCACTTCTCTGTTCTTCATAGAGGAAGGAAGAGCAGGGTGGGGCATACAAAGTCCCAT
CCCTTGAGTTCTGTTTCTACTCAAGTGCCATTCGCATCTTCCCACACTTTCGTGAGAACCACCA
CACACCCGTGCCAATTTAAAGGCTCATTATTTAAACTTCTTACAGGAAAGGAATCCACAGGAAA
TGTGGGTGCATTCTCCAGAGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAGAGAG
GAATCTAGGATGGGGCATCCTTTGGTTTAGAATCAGGTATTAGAAAGAATTGACCTGGACGGTT
CAGCCCCTTGGGTTACATTAAGGAGCACTGAGCCAGAGGTGATTGCGTAGTATAACAAAACAAC
ATTTGCATCCTAGAAGCTCAGCACCAGGAGAGGCTGGGGCTTTTGTGCTCAAGAATGCAAAGGT
CCAAAGAACACTGAACTTTGGCCCACTTCATTGGTGCCCCTTGGGAGCCATTGGGCTTGACCTT
GTAAGGAGATCCTTCACAGCAGCATAATAGTAGGAACTCTGAGCTGGAATTCCATAGGATGCAG
ATCTGGCCCTCTGCCTGCTTTCATTCAGAAAGACACGTCCCCCTGTCACCAACTAGCATGCCTA
CAAATTCTAATGCACACATGAATTCATACACAGACCCACAAATTGACAATGACACATAGGAAAA
TGTTGGGGCACGCGCACACACACACAGACACAGAAGCACATATGAACACACATTAACACCCAAA
TGCACAGGCACACATGTACAAATGTCTTCATGAGAACTGCCACATCTCTGTTCCAACTGAATGG
CTTTGTGTTTAAAATCCCTATGGGAAGTTTGTTGGTTTGTAAATGCAGAATCTAGGAAGGGGCA
GACATATACACATCCACTCCAACACGCTCATACACAATGTACCCAGCACTGGATTCCAGAAAAG
GAGGCTGGAGATGTGGCTCAGTGGTTAAGAATGTATACTGCTCTTACAGAGGAATCCCAAGTTC
AGTTCCCACCATCCACGTTGGGCAACTCACTATCTCCTGCAGCTCTACCTGAAAGGAATCCATT
TCTCTCTTCTTGACTTTGAGGGTACGTACATGGATGTGATTAAGGTTTTAAAAATAAATTCCAG
AAAATCTCGGTAACAAAACATGGAAGGAGCACTTTGGGGTACAGCACCACTGTACATGGAACCC
CACATTAACATTTCTAAATGATACCATAAAGTAAACGCAGTAGCCAAAGTTTTAAAAGATAGAA
GTACACAGGGTCTCTGCATGGTGTGAAAACGAGAGCCTGAACCTGTTCTTCAGCAGCATCGGGC
ACTAATTGTGACAGAGAAGGCATGGCCTCTGATCTTGGTGCCAAGTGAGTCATGTTCACTTTGC
TAGGAGAGCGCCCCCTGCTGCCCAAATTCCCACATGTCTTTAAAGTAGATTCCAAGGGCCATCA
ACTTTCCACTGTCCGTTAAGGTGGTTTCTTGCAAAAAGATCTATCTAGTGTTTCAGGGGTTGTG
AAGTTGGAGAATCCAAAAATACACAATCAATACGCAGCAGTGTGCTCAGGGAATACTGTATGAA
TCACCCAGGGAGGAAATGGAGAAACGCCATGGGAAGTCAGGACCTTTTGTGATTTGTGTAGGGC
CCTTCTGAGAGGTCTGTGTTGGAAGATGAGAAAGAGTACAGCAGCCGGTCAGTGTGGAGAGAGA
CCTAAGGGAGAGTTATGTGCAGGTGAGTGGAGGAGTAACCCACAGCCAGTTACAAAGACAGGAA
AAAAAACTATATGGGCTGTTTATTTGGGGAAAACGTGTTTTATCTGCAACAGGTAGAAGTGCTG
TCTATGGACTTTTGAACTCCAAAGAGGAAGCCAATGACCCAGGTCAACAGAAGCCTGGCTCCTT
GAGAATTCACAAGGAAGGAGCTTAGAACAGACATCTATTTCTTACTGATTGTTAAAGACAACAG
AAATAGCATTTCTATTGCAACCAGATGTCTCGGAGTTTAAAATCATATCCTACTAAAATCTCAG
TGTATAGTGATGCTTTTTTTCCTAATAATAAAATACCTAATGATTTACCCA

hide sequence

RefSeq Acc Id:

XM_008766833 ⟹ XP_008765055

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,121,369 (-)	NCBI
mRatBN7.2	9	17,517,596 - 17,624,107 (-)	NCBI
Rnor_6.0	9	20,091,121 - 20,195,706 (-)	NCBI

Sequence:

show sequence

CCCCACATTAGTTCCCTTCCCCAGCCTCCGCCTCCACCTCGAGCCACGCAGTGCCTCCCAGTTT
CCTCCTGCATTGAGGAACAGCCCACAATTCACCTCTGCCCCAGAGGTCTGGAAGCCGGCGTGAG
CCTGGGAGCATCTAAAGTCTGATCTACTGAAACTCTACCCTCCTCAGGCTGCCTGAATGAATGG
GACACCTTTAAGTTTCACCTCACCTCCGAGGTCTGCAGTGCGCTCTTCTATTTTACCACACAGA
AGTAAATCTGAGGAGGCTGCCCAGTGCTGAAGAGAAAGGCAAAGCCACTCAAACCTGAAGAAAT
GAAATCGTCAAGGACTGTCACGCTCTACTTTGTGCTTATTGTGATTTGTTCCTCAGAAGCTACA
TGGAGCAGGCCAGCAGAGCCCATTGTCCATCCTTTGATTCTCCAAGAACATGAACTAGCAGGGG
AAGAGCTACTGAGGCCAAAAAGAGCAGTTGCAGTGGGTGGTCCTGTGGCAGAAGAATACACCGT
GGATGTTGAGATCAGTTTTGAAAATGTCTCCTTCCTGGAGTCCATCAGAGCTCACTTAAACAGC
CTCCGTTTTCCAGTTCAGGGGAACGGCACTGACATTTTGAGTATGGCAATGACTACAGTCTGCA
CTCCTACTGGGAATGACCTCTTGTGCTTCTGCGAGAAAGGCTACCAGTGGCCTGAGGAAAGGTG
TCTCTCCTCTCTCACTTGTCAAGAGCATGACAGCGCCCTGCCAGGCCGATACTGCAATTGTCTG
AAAGGACTTCCTCCCCAAGGACCTTTCTGCCAGCTCCCAGAAACATACATTACCTTAAAAATCA
AAGTCAGACTGAACATAGGATTTCAAGAAGACCTAGAGAACACATCCTCTGCCCTCTATAGGTC
CTACAAGACTGATCTGGAAAGAGCGTTCCGAGCGGGTTACAGAACTTTACCAGGATTCAGATCG
GTGACTGTGACACAGTTCACCAAGGGCAGCGTGGTTGTGGACTACATAGTCGAGGTTGCATCGG
CACCACTGCCTGGATCAATTCATAAAGCCAATGAGCAAGTCATACAGAACCTCAACCAGACTTA
CAAAATGGACTACAACTCCTTCCAAGGAACACCAAGCAATGAAACAAAGTTCACTGTGACACCA
GAGTTCATCTTTGAAGGAGACAATGTAACTCTGGAATGCGAAAGTGAATTCGTGTCCTCCAACA
CATCTTGGTTCTATGGAGAAAAACGGTCTGACATCCAGAACAGTGACAAATTCTCCATTCACAC
CTCAATCATCAACAATATAAGCCTGGTCACCCGCCTCACTATTTTCAACTTCACACAGCATGAT
GCAGGCTTATATGGTTGCAATGTGACACTGGATATTTTTGAATATGGGACAGTCAGAAAATTAG
ATGTCACTCCCATCCGGATTTTGGCCAAGGAAGAGAGAAAGGTGGTGTGTGACAATAACCCTAT
ATCGTTGAACTGCTGCAGCGAGAATATCGCGAACTGGAGCAGAATCGAGTGGAAACAGGAGGGG
AAAATAAACATTGAAGGCCAGACCTCTAAGGACGAAGTACATTCAACAGGAAGAGGAAGGGGAG
ATACAAGTGTGAACACAGGGACCCCAGAAACAGACCTAGAGTCTAGCTGCAGCACTTATACACT
CAAGGCAGATGGAACCCAGTGTCCCAGTGGTTCTTCTGGAACAACAGTCATCTACACATGTGAG
TTCGTCAGCGTCTACGGAGCCAAAGGCAGTAAGAACATAGCCGTGACCTTCACCTCTGTAGGAG
ATAATTCCAGCTACAAAGGGGAAGTGCCCGAGGCCCCAAGGCATGTGATGGAAGTGAGTACAGT
TCAGAGCACCACCGGGAACAGACTAGAAACAAGTAAATCCCAGGAGCAGCAAGCCAACCTAACA
ATAACCCCGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACTTGCCTCAGCGATG
TGAGTAGCTTTGATGAGGTGTACTGGAACACTTCCGCTGGTATTAAAATCCATCCAAGGTTTTA
TACCATGAGGAGGTATCGGGATGGAGCAGAGTCGGTGCTGACGGTGAAGACCTCCACCAGAGAG
TGGAACGGAACCTACCACTGCATATTTAGATATAAGAATTCATACAGCATAGCCACCAAAGATG
TCACTGTTCACCCTCTGCCTCTGGAGTCAGACATCATGATGGATCCTTTGGAAGCCAGTGGTCT
GTGCACCAGTTCCCATCAGTTCAAGTGCTGCATAGAAGAGAACGATGGGGAAGAGTACATTGTG
ACTTTCCACGTGGATTCCTCATCCTTTCCTGCTGAAAGAGAAGTTATTGGCAAGCAGGCATGCT
ACACATACAGTCTCCCAGGAAAGTTACCATCACGGTGTCCCAAAGACATTGACGTGTTCTGCCA
CTTTACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTTACCCTTGTTCCAGGG
AAGAATATCACATGCCAGGATCCCATCATAGGTATTGGGGAACCTGGGAAAGTCATCCAGAAGC
TGTGCCAGTTTGCAGGTGTTTCTAGAAGCCCTGGACAGACCATTGGTGGAACCGTCACTTATAA
ATGTGTAGGCTCCCAGTGGAAGGAGGAGACAAGGGCCTGCATATCAGCCCCAATCAATGGTTTG
CTCCAGTTGGCCAAGGCTTTGATCAAGAGCCCCTCCCAGGATCAGAAGCTCCCTAAATACCTGC
GGGACCTTTCTGTTAGCACTGGGAAGGAAGAACAGGATATACGCTCGTCGCCCGGGAGCCTGGG
AGCCATCATCAGCATCCTTGATTTGCTTTCAACAGTTCCCACTCAAGTGAATTCAGAAATGATG
AGGGATATACTTGCTACCATTAATGTCATCTTAGACAAGTCCACCTTGAACTCCTGGGAGAAGT
TACTACAGCAACAGAGCAACCAGAGCTCTCAGTTCCTGCAGTCAGTGGAGAGGTTTTCCAAAGC
GCTCGAGCTGGGAGACAGCACCCCTCCCTTCCTCTTCCACCCTAATGTTCAGATGAAGAGCATG
GTGATAAAACGTGGCCACGCCCAAATGTACCAACAGAAATTTGTCTTCACAGACTCTGACCTAT
GGGGTGATGTAGCCATTGATGAGTGTCAGCTGGGAAGCTTGCAGCCTGATTCATCGATCGTTAC
TGTGGCTTTCCCAACTCTCAAAGCCATCCTGGCCCAGGATGGACAGAGAAAGACACCCTCCAAC
AGCCTAGTAATGACCACCACTGTCAGCCATAATATCGTCAAGCCTTTTAGGATTTCTATGACAT
TCAAGAACAACCATCGTTCGGGTGGCAAGCCACAGTGTGTCTTCTGGAACTTCAGCCTTGCCAA
TAATACAGGGGGCTGGGATAGCAGTGGGTGCACTGTGGAAGATGATGGTAGGGACAATAGGGAC
AGAGTCTTCTGCAAGTGTAACCACCTGACGTCATTCTCCATTCTCATGTCCCCAGACTCCCCAG
ACCCAGGATCTCTTTTAAAAATACTTCTGGATATCATTTCTTACATCGGGTTGGGCTTTTCCAT
AGTCAGCTTAGCTGCCTGTCTAGTTGTGGAAGCCATGGTGTGGAAATCAGTGACCAAGAACCGA
ACTTCCTATATGCGCCACATCTGCATCGTCAACATTGCCCTTTGCCTTCTGATTGCTGACATCT
GGTTCATTGTGGCTGGTGCTATCCATGATGGGCATTACCCACTCAACGAAACAGCCTGTGTGGC
CGCCACATTCTTCATTCACTTCTTCTACCTCAGTGTCTTCTTCTGGATGCTAACTCTGGGCCTC
ATGCTCTTCTACCGGCTGATTTTCATTCTACATGACGCGAGCAAGTCCACGCAGAAAGCCATTG
CCTTTTCTCTAGGCTATGGCTGTCCACTCATTATCTCATCCATCACAGTGGGGGTTACACAGCC
ACAGGAAGTTTACATGAGGAAGAATGCATGTTGGCTCAACTGGGAGGACACCAGAGCACTGCTG
GCTTTTGCCATCCCAGCGTTGATTATTGTGGTGGTGAACGTGAGCATCACAGTTGTGGTCATCA
CCAAGATCCTAAGGCCCTCCGTCGGAGACAAGCCAGGCAAGCAGGAGAAGAGCAGCCTATTCCA
GATCAGCAAGAGCATTGGAGTCCTCACGCCACTCTTGGGGCTCACTTGGGGTTTTGGTCTGGCC
ACAGTGATCCAGGGGAGCAATGCTGTGTTCCACATCATATTTACTCTCCTCAATGCCTTTCAGG
GGCTCTTCATTTTGCTCTTTGGCTGCCTCTGGGATCAGAAGGTACAGGAAGCTTTGCTGCATAA
GTTTTCATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAACATCCTTAGGTTCATCAACACCT
GTGTTTTCGATGAGTTCTCCGATATCCCGAAGATTTAATAATCTTTTTGGTAAAACAGGAACAT
ATAACGTTTCCACCCCAGAGACAACCAGCTCATCCGTGGAAAATTCCTCTAGTGCTTACTCATT
GCTCAACTAGGACCAGATAATGCCAAATTCACAGGAGCTCTCAGAAATAGGGCCCCTGCCAAGA
AAAGGGACCCATATCCAAATCTATGGGTAAAGTGTTCTCTCTGCAGACTTCTGGGAGCAGATGC
TGAAGAGACTCTTTGAATAGAGAAGATGCTTTCTTTTGTAAAGACAGACTAAATGTTTAATTTT
GCTCCCACCCCTATCCCTTGTGTAATGCCAAATATGTATAGTATTTAAAAGAACCCTCCCACAA
GGCTCAACCTTTCTCTGTGTATTGTAAAATAGAAAATTGAGAGTTTTACACACACACACACACA
CACACACACACACACACACACACACCCCATTGGCTACAAAGATAAAAGCTGATTGAAACAGTAA
GTAAAAAGTGAGTATCCAGAATTTCAGTGAATTCAAGAAAGGAAGGAGTGGGGAGGGGAGAGAA
AGGATGATATAATGGAAGGTAGGAATGAAGGGAAGGAGGGAGGGGTGAGATAGGAAGGAAGGAA
GGATGATGTAGAAAACGTTAGGGAGCACATCAATTTCCACAATTGTGATCTAATATGGCTACTC
ATCTACCACAGCCCTGGGAATGAAATATATGGCTTAAAAAAGGAAAATGAGATGAAACCATGGG
GAATGTAGGTAAGTTTCTGATCTTTCCCTGGCTAAAAGGATAAAAGACAGAGGAGGGAAAGTAG
AAAAGAAAGTAGGAGGGAAAGATCACCATGAGGATGCTTGTGGCTGGATGATAATATTTGCAAG
CAGTGCACCCAAGGAGACACGGTTCTCCTCATGAAAAGGACATGTATGAATCTTTGTATGTCAA
GGGTTGAGCAAAGCAGGGTGAACATGCAGAGCATGTATGACAGCCACTCTGTAAGATTCAAGAA
AGGTTTGTTTCTCATGATCTGTCAGAAAAGTATTGCATGCTAGTTCATTCAGCATTTTGGAAGC
AATGCATGCATATGCATATATTTTCTCCAGTAATTGACAAACTTGATCTACTGCACTGAGATCA
GAGTCCCACATCTTCCTTACATGTAACAGCTTTAACCAGGTACTCGCTGTGCATTGTAGAATAG
ATTTAATAATTGTGTAGCGTGTACATTTTTATTATGCCTTTGTGACTTCATTGCAACCATGGCA
ACGATAGCCCTTGGTGTGCCATCCGTATTGCTATGCACTATCCTTTCCCAGCCATCTAAGTTCC
CAGGCCAATATACATTGAGAGTTTCTATGGCCTGATTTGTGTTTCTTGCAGCCACTTGGAAGGC
TTCTGGAGAAAAAGTAGCTGGCTCTTCTGTGCTCCCAGCCATGTTTTACTTTGATAAGGAAACG
GCAGATCCCCTACCCCCACCACCAAGAGTTAGATTGTGAATTTATACCTATGTGGTTTTTGTAT
GTGTGTCTCGCAAAAATACAGATATTTATTAAAACTGCATCATCCATGTTAGAACTCCCATGCT
CTGTACCCAAGAGCAAGCATGCATTCCATATCCAAGTGTGGTCTTAAAGGAACAGTGTCAGTAA
GGATGATGTCTTAAGTTAATTTCTCACTGCTGTAGTAAGGCATGCTGATGAAAACCTACAGGAA
AAAAGGTTTGTTTTGGCTTACCCTTTGGATTACAGCCCATCATGACTGGGAAAGCACGGCTGTA
GGAGCATGAAGCCACCCCATCACACAGCCTCAGCAGTCTGGAAATAAAGAACAGGAAGTGGGGT
CAGACTGTGCAAACTCTAAGCCCTCCCACCCGGTGACATCTTTCCTCTAGCCAGGCTCCACCTC
ATAAAAGTTCTATAATCTTCCCAAACAGCACCATTAATTGCGGGCAGAGGGTTCTGATACATGG
GCCTATGGGGGACATTTTACATTCAAACAACAACATACAGCAGACTCTTTAGGATGGATATGCA
GTGTTGGAGGTTTATGGAATGAGAGATTATGTGGGGTCCTTCCTTGGGAAGACAGGAGAAGAGC
CTGAGGTCTGATATTCAAAGTTTTAAGTACTTTCGGTCTCTTAGTTCTAAGCTTAAATTCTACT
TCCACTTCTCTGTTCTTCATAGAGGAAGGAAGAGCAGGGTGGGGCATACAAAGTCCCATCCCTT
GAGTTCTGTTTCTACTCAAGTGCCATTCGCATCTTCCCACACTTTCGTGAGAACCACCACACAC
CCGTGCCAATTTAAAGGCTCATTATTTAAACTTCTTACAGGAAAGGAATCCACAGGAAATGTGG
GTGCATTCTCCAGAGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAGAGAGGAATC
TAGGATGGGGCATCCTTTGGTTTAGAATCAGGTATTAGAAAGAATTGACCTGGACGGTTCAGCC
CCTTGGGTTACATTAAGGAGCACTGAGCCAGAGGTGATTGCGTAGTATAACAAAACAACATTTG
CATCCTAGAAGCTCAGCACCAGGAGAGGCTGGGGCTTTTGTGCTCAAGAATGCAAAGGTCCAAA
GAACACTGAACTTTGGCCCACTTCATTGGTGCCCCTTGGGAGCCATTGGGCTTGACCTTGTAAG
GAGATCCTTCACAGCAGCATAATAGTAGGAACTCTGAGCTGGAATTCCATAGGATGCAGATCTG
GCCCTCTGCCTGCTTTCATTCAGAAAGACACGTCCCCCTGTCACCAACTAGCATGCCTACAAAT
TCTAATGCACACATGAATTCATACACAGACCCACAAATTGACAATGACACATAGGAAAATGTTG
GGGCACGCGCACACACACACAGACACAGAAGCACATATGAACACACATTAACACCCAAATGCAC
AGGCACACATGTACAAATGTCTTCATGAGAACTGCCACATCTCTGTTCCAACTGAATGGCTTTG
TGTTTAAAATCCCTATGGGAAGTTTGTTGGTTTGTAAATGCAGAATCTAGGAAGGGGCAGACAT
ATACACATCCACTCCAACACGCTCATACACAATGTACCCAGCACTGGATTCCAGAAAAGGAGGC
TGGAGATGTGGCTCAGTGGTTAAGAATGTATACTGCTCTTACAGAGGAATCCCAAGTTCAGTTC
CCACCATCCACGTTGGGCAACTCACTATCTCCTGCAGCTCTACCTGAAAGGAATCCATTTCTCT
CTTCTTGACTTTGAGGGTACGTACATGGATGTGATTAAGGTTTTAAAAATAAATTCCAGAAAAT
CTCGGTAACAAAACATGGAAGGAGCACTTTGGGGTACAGCACCACTGTACATGGAACCCCACAT
TAACATTTCTAAATGATACCATAAAGTAAACGCAGTAGCCAAAGTTTTAAAAGATAGAAGTACA
CAGGGTCTCTGCATGGTGTGAAAACGAGAGCCTGAACCTGTTCTTCAGCAGCATCGGGCACTAA
TTGTGACAGAGAAGGCATGGCCTCTGATCTTGGTGCCAAGTGAGTCATGTTCACTTTGCTAGGA
GAGCGCCCCCTGCTGCCCAAATTCCCACATGTCTTTAAAGTAGATTCCAAGGGCCATCAACTTT
CCACTGTCCGTTAAGGTGGTTTCTTGCAAAAAGATCTATCTAGTGTTTCAGGGGTTGTGAAGTT
GGAGAATCCAAAAATACACAATCAATACGCAGCAGTGTGCTCAGGGAATACTGTATGAATCACC
CAGGGAGGAAATGGAGAAACGCCATGGGAAGTCAGGACCTTTTGTGATTTGTGTAGGGCCCTTC
TGAGAGGTCTGTGTTGGAAGATGAGAAAGAGTACAGCAGCCGGTCAGTGTGGAGAGAGACCTAA
GGGAGAGTTATGTGCAGGTGAGTGGAGGAGTAACCCACAGCCAGTTACAAAGACAGGAAAAAAA
ACTATATGGGCTGTTTATTTGGGGAAAACGTGTTTTATCTGCAACAGGTAGAAGTGCTGTCTAT
GGACTTTTGAACTCCAAAGAGGAAGCCAATGACCCAGGTCAACAGAAGCCTGGCTCCTTGAGAA
TTCACAAGGAAGGAGCTTAGAACAGACATCTATTTCTTACTGATTGTTAAAGACAACAGAAATA
GCATTTCTATTGCAACCAGATGTCTCGGAGTTTAAAATCATATCCTACTAAAATCTCAGTGTAT
AGTGATGCTTTTTTTCCTAATAATAAAATACCTAATGATTTACCCA

hide sequence

RefSeq Acc Id:

XM_008766834 ⟹ XP_008765056

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,018,973 - 25,079,333 (-)	NCBI
mRatBN7.2	9	17,521,671 - 17,582,066 (-)	NCBI
Rnor_6.0	9	20,095,245 - 20,168,006 (-)	NCBI

Sequence:

show sequence

CGTCTTTCCACTTGGAGGAGAGGCTTCTCAATAAGAGGACCTGAAGGACTTCCTATGGGCGTGA
GGGAAATCGCACACGCCATCCGGGGAAGTGGACCAGGAAATCGCTTCTTGTTTTTCAAACAGCA
ACGAGGCTCTAGGGGATGGCTCTGTGAGGCTTGGAGGAGTGCAGCTCTGGGAGGCAAAAGTTGA
GCAAAGGAGTGGCCAGACCTGTTCATCATGATGCCTGCCCTGCTGCCTCCTGACTGTCTGTGAG
CCCCCTAAGAAGGCTGCGGGGCCAATGGCCCCGTAGTGAAAGACAGAGAAGTTTCTAGGCATCT
GTTGAGAGCAGGCGCTTGCTTGGAGACAGCAACGGTGGTGGACAGGCAAAGCCACTCAAACCTG
AAGAAATGAAATCGTCAAGGACTGTCACGCTCTACTTTGTGCTTATTGTGATTTGTTCCTCAGA
AGCTACATGGAGCAGGCCAGCAGAGCCCATTGTCCATCCTTTGATTCTCCAAGAACATGAACTA
GCAGGGGAAGAGCTACTGAGGCCAAAAAGAGCAGTTGCAGTGGGTGGTCCTGTGGCAGAAGAAT
ACACCGTGGATGTTGAGATCAGTTTTGAAAATGTCTCCTTCCTGGAGTCCATCAGAGCTCACTT
AAACAGCCTCCGTTTTCCAGTTCAGGGGAACGGCACTGACATTTTGAGTATGGCAATGACTACA
GTCTGCACTCCTACTGGGAATGACCTCTTGTGCTTCTGCGAGAAAGGCTACCAGTGGCCTGAGG
AAAGGTGTCTCTCCTCTCTCACTTGTCAAGAGCATGACAGCGCCCTGCCAGGCCGATACTGCAA
TTGTCTGAAAGGACTTCCTCCCCAAGGACCTTTCTGCCAGCTCCCAGAAACATACATTACCTTA
AAAATCAAAGTCAGACTGAACATAGGATTTCAAGAAGACCTAGAGAACACATCCTCTGCCCTCT
ATAGGTCCTACAAGACTGATCTGGAAAGAGCGTTCCGAGCGGGTTACAGAACTTTACCAGGATT
CAGATCGGTGACTGTGACACAGTTCACCAAGGGCAGCGTGGTTGTGGACTACATAGTCGAGGTT
GCATCGGCACCACTGCCTGGATCAATTCATAAAGCCAATGAGCAAGTCATACAGAACCTCAACC
AGACTTACAAAATGGACTACAACTCCTTCCAAGGAACACCAAGCAATGAAACAAAGTTCACTGT
GACACCAGAGTTCATCTTTGAAGGAGACAATGTAACTCTGGAATGCGAAAGTGAATTCGTGTCC
TCCAACACATCTTGGTTCTATGGAGAAAAACGGTCTGACATCCAGAACAGTGACAAATTCTCCA
TTCACACCTCAATCATCAACAATATAAGCCTGGTCACCCGCCTCACTATTTTCAACTTCACACA
GCATGATGCAGGCTTATATGGTTGCAATGTGACACTGGATATTTTTGAATATGGGACAGTCAGA
AAATTAGATGTCACTCCCATCCGGATTTTGGCCAAGGAAGAGAGAAAGGTGGTGTGTGACAATA
ACCCTATATCGTTGAACTGCTGCAGCGAGAATATCGCGAACTGGAGCAGAATCGAGTGGAAACA
GGAGGGGAAAATAAACATTGAAGGCCAGACCTCTAAGGACGAAGTACATTCAACAGGAAGAGGA
AGGGGAGATACAAGTGTGAACACAGGGACCCCAGAAACAGACCTAGAGTCTAGCTGCAGCACTT
ATACACTCAAGGCAGATGGAACCCAGTGTCCCAGTGGTTCTTCTGGAACAACAGTCATCTACAC
ATGTGAGTTCGTCAGCGTCTACGGAGCCAAAGGCAGTAAGAACATAGCCGTGACCTTCACCTCT
GTAGGAGATAATTCCAGCTACAAAGGGGAAGTGCCCGAGGCCCCAAGGCATGTGATGGAAGTGA
GTACAGTTCAGAGCACCACCGGGAACAGACTAGAAACAAGTAAATCCCAGGAGCAGCAAGCCAA
CCTAACAATAACCCCGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACTTGCCTC
AGCGATGTGAGTAGCTTTGATGAGGTGTACTGGAACACTTCCGCTGGTATTAAAATCCATCCAA
GGTTTTATACCATGAGGAGGTATCGGGATGGAGCAGAGTCGGTGCTGACGGTGAAGACCTCCAC
CAGAGAGTGGAACGGAACCTACCACTGCATATTTAGATATAAGAATTCATACAGCATAGCCACC
AAAGATGTCACTGTTCACCCTCTGCCTCTGGAGTCAGACATCATGATGGATCCTTTGGAAGCCA
GTGGTCTGTGCACCAGTTCCCATCAGTTCAAGTGCTGCATAGAAGAGAACGATGGGGAAGAGTA
CATTGTGACTTTCCACGTGGATTCCTCATCCTTTCCTGCTGAAAGAGAAGTTATTGGCAAGCAG
GCATGCTACACATACAGTCTCCCAGGAAAGTTACCATCACGGTGTCCCAAAGACATTGACGTGT
TCTGCCACTTTACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTTACCCTTGT
TCCAGGGAAGAATATCACATGCCAGGATCCCATCATAGGTATTGGGGAACCTGGGAAAGTCATC
CAGAAGCTGTGCCAGTTTGCAGGTGTTTCTAGAAGCCCTGGACAGACCATTGGTGGAACCGTCA
CTTATAAATGTGTAGGCTCCCAGTGGAAGGAGGAGACAAGGGCCTGCATATCAGCCCCAATCAA
TGGTTTGCTCCAGTTGGCCAAGGCTTTGATCAAGAGCCCCTCCCAGGATCAGAAGCTCCCTAAA
TACCTGCGGGACCTTTCTGTTAGCACTGGGAAGGAAGAACAGGATATACGCTCGTCGCCCGGGA
GCCTGGGAGCCATCATCAGCATCCTTGATTTGCTTTCAACAGTTCCCACTCAAGTGAATTCAGA
AATGATGAGGGATATACTTGCTACCATTAATGTCATCTTAGACAAGTCCACCTTGAACTCCTGG
GAGAAGTTACTACAGCAACAGAGCAACCAGAGCTCTCAGTTCCTGCAGTCAGTGGAGAGGTTTT
CCAAAGCGCTCGAGCTGGGAGACAGCACCCCTCCCTTCCTCTTCCACCCTAATGTTCAGATGAA
GAGCATGGTGATAAAACGTGGCCACGCCCAAATGTACCAACAGAAATTTGTCTTCACAGACTCT
GACCTATGGGGTGATGTAGCCATTGATGAGTGTCAGCTGGGAAGCTTGCAGCCTGATTCATCGA
TCGTTACTGTGGCTTTCCCAACTCTCAAAGCCATCCTGGCCCAGGATGGACAGAGAAAGACACC
CTCCAACAGCCTAGTAATGACCACCACTGTCAGCCATAATATCGTCAAGCCTTTTAGGATTTCT
ATGACATTCAAGAACAACCATCGTTCGGGTGGCAAGCCACAGTGTGTCTTCTGGAACTTCAGCC
TTGCCAATAATACAGGGGGCTGGGATAGCAGTGGGTGCACTGTGGAAGATGATGGTAGGGACAA
TAGGGACAGAGTCTTCTGCAAGTGTAACCACCTGACGTCATTCTCCATTCTCATGTCCCCAGAC
TCCCCAGACCCAGGATCTCTTTTAAAAATACTTCTGGATATCATTTCTTACATCGGGTTGGGCT
TTTCCATAGTCAGCTTAGCTGCCTGTCTAGTTGTGGAAGCCATGGTGTGGAAATCAGTGACCAA
GAACCGAACTTCCTATATGCGCCACATCTGCATCGTCAACATTGCCCTTTGCCTTCTGATTGCT
GACATCTGGTTCATTGTGGCTGGTGCTATCCATGATGGGCATTACCCACTCAACGAAACAGCCT
GTGTGGCCGCCACATTCTTCATTCACTTCTTCTACCTCAGTGTCTTCTTCTGGATGCTAACTCT
GGGCCTCATGCTCTTCTACCGGCTGATTTTCATTCTACATGACGCGAGCAAGTCCACGCAGAAA
GCCATTGCCTTTTCTCTAGGCTATGGCTGTCCACTCATTATCTCATCCATCACAGTGGGGGTTA
CACAGCCACAGGAAGTTTACATGAGGAAGAATGCATGTTGGCTCAACTGGGAGGACACCAGAGC
ACTGCTGGCTTTTGCCATCCCAGCGTTGATTATTGTGGTGGTGAACGTGAGCATCACAGTTGTG
GTCATCACCAAGATCCTAAGGCCCTCCGTCGGAGACAAGCCAGGCAAGCAGGAGAAGAGCAGCC
TATTCCAGATCAGCAAGAGCATTGGAGTCCTCACGCCACTCTTGGGGCTCACTTGGGGTTTTGG
TCTGGCCACAGTGATCCAGGGGAGCAATGCTGTGTTCCACATCATATTTACTCTCCTCAATGCC
TTTCAGGGGCTCTTCATTTTGCTCTTTGGCTGCCTCTGGGATCAGAAGGTACAGGAAGCTTTGC
TGCATAAGTTTTCATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAACATCCTTAGGTTCATC
AACACCTGTGTTTTCGATGAGTTCTCCGATATCCCGAAGATTTAATAATCTTTTTGGTAAAACA
GCAACCCCAAAGGTCCCCCAAGGCAATGATGGACACCTTGTTATCAGTGGCAGTTCATCCTCCT
GATGGAACATATAACGTTTCCACCCCAGAGACAACCAGCTCATCCGTGGAAAATTCCTCTAGTG
CTTACTCATTGCTCAACTAGGACCAGAT

hide sequence

RefSeq Acc Id:

XM_039083012 ⟹ XP_038938940

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,079,333 (-)	NCBI
mRatBN7.2	9	17,517,596 - 17,582,066 (-)	NCBI

RefSeq Acc Id:

XM_039083013 ⟹ XP_038938941

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,079,333 (-)	NCBI
mRatBN7.2	9	17,517,596 - 17,582,066 (-)	NCBI

RefSeq Acc Id:

XM_039083014 ⟹ XP_038938942

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,093,161 (-)	NCBI
mRatBN7.2	9	17,517,596 - 17,592,525 (-)	NCBI

RefSeq Acc Id:

XM_063266630 ⟹ XP_063122700

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,018,973 - 25,079,333 (-)	NCBI

RefSeq Acc Id:

XM_063266631 ⟹ XP_063122701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,128,045 (-)	NCBI

RefSeq Acc Id:

XM_063266632 ⟹ XP_063122702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	25,014,861 - 25,128,045 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_620810	(Get FASTA)	NCBI Sequence Viewer
	XP_008765054	(Get FASTA)	NCBI Sequence Viewer
	XP_008765055	(Get FASTA)	NCBI Sequence Viewer
	XP_008765056	(Get FASTA)	NCBI Sequence Viewer
	XP_038938940	(Get FASTA)	NCBI Sequence Viewer
	XP_038938941	(Get FASTA)	NCBI Sequence Viewer
	XP_038938942	(Get FASTA)	NCBI Sequence Viewer
	XP_063122700	(Get FASTA)	NCBI Sequence Viewer
	XP_063122701	(Get FASTA)	NCBI Sequence Viewer
	XP_063122702	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA82518	(Get FASTA)	NCBI Sequence Viewer
	EDM18692	(Get FASTA)	NCBI Sequence Viewer
	EDM18693	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015223
	ENSRNOP00000015223.1
	ENSRNOP00000071238
	ENSRNOP00000096657
	ENSRNOP00000102120
GenBank Protein	Q9WVT0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_620810 ⟸ NM_139110
- Peptide Label:	precursor
- UniProtKB:	Q9WVT0 (UniProtKB/Swiss-Prot), A6JJ39 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKSSRTVTLYFVLIVICSSEATWSRPAEPIVHPLILQEHELAGEELLRPKRAVAVGGPVAEEYT VDVEISFENVSFLESIRAHLNSLRFPVQGNGTDILSMAMTTVCTPTGNDLLCFCEKGYQWPEER CLSSLTCQEHDSALPGRYCNCLKGLPPQGPFCQLPETYITLKIKVRLNIGFQEDLENTSSALYR SYKTDLERAFRAGYRTLPGFRSVTVTQFTKGSVVVDYIVEVASAPLPGSIHKANEQVIQNLNQT YKMDYNSFQGTPSNETKFTVTPEFIFEGDNVTLECESEFVSSNTSWFYGEKRSDIQNSDKFSIH TSIINNISLVTRLTIFNFTQHDAGLYGCNVTLDIFEYGTVRKLDVTPIRILAKEERKVVCDNNP ISLNCCSENIANWSRIEWKQEGKINIEGTPETDLESSCSTYTLKADGTQCPSGSSGTTVIYTCE FVSVYGAKGSKNIAVTFTSVANLTITPDPISVSEGQSFSITCLSDVSSFDEVYWNTSAGIKIHP RFYTMRRYRDGAESVLTVKTSTREWNGTYHCIFRYKNSYSIATKDVTVHPLPLESDIMMDPLEA SGLCTSSHQFKCCIEENDGEEYIVTFHVDSSSFPAEREVIGKQACYTYSLPGKLPSRCPKDIDV FCHFTNAANSSVRSPSMKLTLVPGKNITCQDPIIGIGEPGKVIQKLCQFAGVSRSPGQTIGGTV TYKCVGSQWKEETRACISAPINGLLQLAKALIKSPSQDQKLPKYLRDLSVSTGKEEQDIRSSPG SLGAIISILDLLSTVPTQVNSEMMRDILATINVILDKSTLNSWEKLLQQQSNQSSQFLQSVERF SKALELGDSTPPFLFHPNVQMKSMVIKRGHAQMYQQKFVFTDSDLWGDVAIDECQLGSLQPDSS IVTVAFPTLKAILAQDGQRKTPSNSLVMTTTVSHNIVKPFRISMTFKNNHRSGGKPQCVFWNFS LANNTGGWDSSGCTVEDDGRDNRDRVFCKCNHLTSFSILMSPDSPDPGSLLKILLDIISYIGLG FSIVSLAACLVVEAMVWKSVTKNRTSYMRHICIVNIALCLLIADIWFIVAGAIHDGHYPLNETA CVAATFFIHFFYLSVFFWMLTLGLMLFYRLIFILHDASKSTQKAIAFSLGYGCPLIISSITVGV TQPQEVYMRKNACWLNWEDTRALLAFAIPALIIVVVNVSITVVVITKILRPSVGDKPGKQEKSS LFQISKSIGVLTPLLGLTWGFGLATVIQGSNAVFHIIFTLLNAFQGLFILLFGCLWDQKVQEAL LHKFSLSRWSSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKTGTYNVSTPETTSSSVENSSSA YSLLN hide sequence

RefSeq Acc Id:

XP_008765055 ⟸ XM_008766833

- Peptide Label:

isoform X6

- Sequence:

show sequence

MKSSRTVTLYFVLIVICSSEATWSRPAEPIVHPLILQEHELAGEELLRPKRAVAVGGPVAEEYT
VDVEISFENVSFLESIRAHLNSLRFPVQGNGTDILSMAMTTVCTPTGNDLLCFCEKGYQWPEER
CLSSLTCQEHDSALPGRYCNCLKGLPPQGPFCQLPETYITLKIKVRLNIGFQEDLENTSSALYR
SYKTDLERAFRAGYRTLPGFRSVTVTQFTKGSVVVDYIVEVASAPLPGSIHKANEQVIQNLNQT
YKMDYNSFQGTPSNETKFTVTPEFIFEGDNVTLECESEFVSSNTSWFYGEKRSDIQNSDKFSIH
TSIINNISLVTRLTIFNFTQHDAGLYGCNVTLDIFEYGTVRKLDVTPIRILAKEERKVVCDNNP
ISLNCCSENIANWSRIEWKQEGKINIEGQTSKDEVHSTGRGRGDTSVNTGTPETDLESSCSTYT
LKADGTQCPSGSSGTTVIYTCEFVSVYGAKGSKNIAVTFTSVGDNSSYKGEVPEAPRHVMEVST
VQSTTGNRLETSKSQEQQANLTITPDPISVSEGQSFSITCLSDVSSFDEVYWNTSAGIKIHPRF
YTMRRYRDGAESVLTVKTSTREWNGTYHCIFRYKNSYSIATKDVTVHPLPLESDIMMDPLEASG
LCTSSHQFKCCIEENDGEEYIVTFHVDSSSFPAEREVIGKQACYTYSLPGKLPSRCPKDIDVFC
HFTNAANSSVRSPSMKLTLVPGKNITCQDPIIGIGEPGKVIQKLCQFAGVSRSPGQTIGGTVTY
KCVGSQWKEETRACISAPINGLLQLAKALIKSPSQDQKLPKYLRDLSVSTGKEEQDIRSSPGSL
GAIISILDLLSTVPTQVNSEMMRDILATINVILDKSTLNSWEKLLQQQSNQSSQFLQSVERFSK
ALELGDSTPPFLFHPNVQMKSMVIKRGHAQMYQQKFVFTDSDLWGDVAIDECQLGSLQPDSSIV
TVAFPTLKAILAQDGQRKTPSNSLVMTTTVSHNIVKPFRISMTFKNNHRSGGKPQCVFWNFSLA
NNTGGWDSSGCTVEDDGRDNRDRVFCKCNHLTSFSILMSPDSPDPGSLLKILLDIISYIGLGFS
IVSLAACLVVEAMVWKSVTKNRTSYMRHICIVNIALCLLIADIWFIVAGAIHDGHYPLNETACV
AATFFIHFFYLSVFFWMLTLGLMLFYRLIFILHDASKSTQKAIAFSLGYGCPLIISSITVGVTQ
PQEVYMRKNACWLNWEDTRALLAFAIPALIIVVVNVSITVVVITKILRPSVGDKPGKQEKSSLF
QISKSIGVLTPLLGLTWGFGLATVIQGSNAVFHIIFTLLNAFQGLFILLFGCLWDQKVQEALLH
KFSLSRWSSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKTGTYNVSTPETTSSSVENSSSAYS
LLN

hide sequence

RefSeq Acc Id:

XP_008765054 ⟸ XM_008766832

- Peptide Label:

isoform X6

- Sequence:

show sequence

MKSSRTVTLYFVLIVICSSEATWSRPAEPIVHPLILQEHELAGEELLRPKRAVAVGGPVAEEYT
VDVEISFENVSFLESIRAHLNSLRFPVQGNGTDILSMAMTTVCTPTGNDLLCFCEKGYQWPEER
CLSSLTCQEHDSALPGRYCNCLKGLPPQGPFCQLPETYITLKIKVRLNIGFQEDLENTSSALYR
SYKTDLERAFRAGYRTLPGFRSVTVTQFTKGSVVVDYIVEVASAPLPGSIHKANEQVIQNLNQT
YKMDYNSFQGTPSNETKFTVTPEFIFEGDNVTLECESEFVSSNTSWFYGEKRSDIQNSDKFSIH
TSIINNISLVTRLTIFNFTQHDAGLYGCNVTLDIFEYGTVRKLDVTPIRILAKEERKVVCDNNP
ISLNCCSENIANWSRIEWKQEGKINIEGQTSKDEVHSTGRGRGDTSVNTGTPETDLESSCSTYT
LKADGTQCPSGSSGTTVIYTCEFVSVYGAKGSKNIAVTFTSVGDNSSYKGEVPEAPRHVMEVST
VQSTTGNRLETSKSQEQQANLTITPDPISVSEGQSFSITCLSDVSSFDEVYWNTSAGIKIHPRF
YTMRRYRDGAESVLTVKTSTREWNGTYHCIFRYKNSYSIATKDVTVHPLPLESDIMMDPLEASG
LCTSSHQFKCCIEENDGEEYIVTFHVDSSSFPAEREVIGKQACYTYSLPGKLPSRCPKDIDVFC
HFTNAANSSVRSPSMKLTLVPGKNITCQDPIIGIGEPGKVIQKLCQFAGVSRSPGQTIGGTVTY
KCVGSQWKEETRACISAPINGLLQLAKALIKSPSQDQKLPKYLRDLSVSTGKEEQDIRSSPGSL
GAIISILDLLSTVPTQVNSEMMRDILATINVILDKSTLNSWEKLLQQQSNQSSQFLQSVERFSK
ALELGDSTPPFLFHPNVQMKSMVIKRGHAQMYQQKFVFTDSDLWGDVAIDECQLGSLQPDSSIV
TVAFPTLKAILAQDGQRKTPSNSLVMTTTVSHNIVKPFRISMTFKNNHRSGGKPQCVFWNFSLA
NNTGGWDSSGCTVEDDGRDNRDRVFCKCNHLTSFSILMSPDSPDPGSLLKILLDIISYIGLGFS
IVSLAACLVVEAMVWKSVTKNRTSYMRHICIVNIALCLLIADIWFIVAGAIHDGHYPLNETACV
AATFFIHFFYLSVFFWMLTLGLMLFYRLIFILHDASKSTQKAIAFSLGYGCPLIISSITVGVTQ
PQEVYMRKNACWLNWEDTRALLAFAIPALIIVVVNVSITVVVITKILRPSVGDKPGKQEKSSLF
QISKSIGVLTPLLGLTWGFGLATVIQGSNAVFHIIFTLLNAFQGLFILLFGCLWDQKVQEALLH
KFSLSRWSSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKTGTYNVSTPETTSSSVENSSSAYS
LLN

hide sequence

RefSeq Acc Id:

XP_008765056 ⟸ XM_008766834

- Peptide Label:

isoform X1

- Sequence:

show sequence

MKSSRTVTLYFVLIVICSSEATWSRPAEPIVHPLILQEHELAGEELLRPKRAVAVGGPVAEEYT
VDVEISFENVSFLESIRAHLNSLRFPVQGNGTDILSMAMTTVCTPTGNDLLCFCEKGYQWPEER
CLSSLTCQEHDSALPGRYCNCLKGLPPQGPFCQLPETYITLKIKVRLNIGFQEDLENTSSALYR
SYKTDLERAFRAGYRTLPGFRSVTVTQFTKGSVVVDYIVEVASAPLPGSIHKANEQVIQNLNQT
YKMDYNSFQGTPSNETKFTVTPEFIFEGDNVTLECESEFVSSNTSWFYGEKRSDIQNSDKFSIH
TSIINNISLVTRLTIFNFTQHDAGLYGCNVTLDIFEYGTVRKLDVTPIRILAKEERKVVCDNNP
ISLNCCSENIANWSRIEWKQEGKINIEGQTSKDEVHSTGRGRGDTSVNTGTPETDLESSCSTYT
LKADGTQCPSGSSGTTVIYTCEFVSVYGAKGSKNIAVTFTSVGDNSSYKGEVPEAPRHVMEVST
VQSTTGNRLETSKSQEQQANLTITPDPISVSEGQSFSITCLSDVSSFDEVYWNTSAGIKIHPRF
YTMRRYRDGAESVLTVKTSTREWNGTYHCIFRYKNSYSIATKDVTVHPLPLESDIMMDPLEASG
LCTSSHQFKCCIEENDGEEYIVTFHVDSSSFPAEREVIGKQACYTYSLPGKLPSRCPKDIDVFC
HFTNAANSSVRSPSMKLTLVPGKNITCQDPIIGIGEPGKVIQKLCQFAGVSRSPGQTIGGTVTY
KCVGSQWKEETRACISAPINGLLQLAKALIKSPSQDQKLPKYLRDLSVSTGKEEQDIRSSPGSL
GAIISILDLLSTVPTQVNSEMMRDILATINVILDKSTLNSWEKLLQQQSNQSSQFLQSVERFSK
ALELGDSTPPFLFHPNVQMKSMVIKRGHAQMYQQKFVFTDSDLWGDVAIDECQLGSLQPDSSIV
TVAFPTLKAILAQDGQRKTPSNSLVMTTTVSHNIVKPFRISMTFKNNHRSGGKPQCVFWNFSLA
NNTGGWDSSGCTVEDDGRDNRDRVFCKCNHLTSFSILMSPDSPDPGSLLKILLDIISYIGLGFS
IVSLAACLVVEAMVWKSVTKNRTSYMRHICIVNIALCLLIADIWFIVAGAIHDGHYPLNETACV
AATFFIHFFYLSVFFWMLTLGLMLFYRLIFILHDASKSTQKAIAFSLGYGCPLIISSITVGVTQ
PQEVYMRKNACWLNWEDTRALLAFAIPALIIVVVNVSITVVVITKILRPSVGDKPGKQEKSSLF
QISKSIGVLTPLLGLTWGFGLATVIQGSNAVFHIIFTLLNAFQGLFILLFGCLWDQKVQEALLH
KFSLSRWSSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKTATPKVPQGNDGHLVISGSSSS

hide sequence

Ensembl Acc Id:

ENSRNOP00000071238 ⟸ ENSRNOT00000082904

Ensembl Acc Id:

ENSRNOP00000015223 ⟸ ENSRNOT00000015223

RefSeq Acc Id:	XP_038938942 ⟸ XM_039083014
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038938940 ⟸ XM_039083012
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JZZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938941 ⟸ XM_039083013
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000096657 ⟸ ENSRNOT00000118179

RefSeq Acc Id:	XP_063122702 ⟸ XM_063266632
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063122701 ⟸ XM_063266631
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063122700 ⟸ XM_063266630
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AR34 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000102120 ⟸ ENSRNOT00000135806

Protein Domains

G-protein coupled receptors family 2 profile GAIN-B Ig-like SEA

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9WVT0-F1-model_v2	AlphaFold	Q9WVT0	1-1349	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696558

Promoter ID:

EPDNEW_R7082

Type:

multiple initiation site

Name:

Adgrf5_1

Description:

adhesion G protein-coupled receptor F5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	20,195,601 - 20,195,661	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621679	AgrOrtholog
BioCyc Gene	G2FUF-28104	BioCyc
Ensembl Genes	ENSRNOG00000011154	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000015223	ENTREZGENE
	ENSRNOT00000015223.3	UniProtKB/Swiss-Prot
	ENSRNOT00000082904	ENTREZGENE
	ENSRNOT00000118179	ENTREZGENE
	ENSRNOT00000135806	ENTREZGENE
Gene3D-CATH	2.60.220.50	UniProtKB/Swiss-Prot
	2.60.40.10	UniProtKB/Swiss-Prot
	3.30.70.960	UniProtKB/Swiss-Prot
	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot
InterPro	Adhesion_GPCR	UniProtKB/Swiss-Prot
	GAIN_B	UniProtKB/Swiss-Prot
	GAIN_dom_sf	UniProtKB/Swiss-Prot
	GPCR_2-like	UniProtKB/Swiss-Prot
	GPCR_2_Ig-hepta-like_rcpt	UniProtKB/Swiss-Prot
	GPCR_2_secretin-like	UniProtKB/Swiss-Prot
	GPCR_2_secretin-like_CS	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
	Immunoglobulin	UniProtKB/Swiss-Prot
	SEA_dom	UniProtKB/Swiss-Prot
	SEA_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:245977	UniProtKB/Swiss-Prot
NCBI Gene	245977	ENTREZGENE
PANTHER	ADHESION G PROTEIN-COUPLED RECEPTOR F5	UniProtKB/Swiss-Prot
	PTHR45813	UniProtKB/Swiss-Prot
Pfam	7tm_2	UniProtKB/Swiss-Prot
	ADGRF3_N	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	PF00047	UniProtKB/Swiss-Prot
	SEA	UniProtKB/Swiss-Prot
PhenoGen	Adgrf5	PhenoGen
PRINTS	GPCRSECRETIN	UniProtKB/Swiss-Prot
	IGHEPTARCPTR	UniProtKB/Swiss-Prot
PROSITE	G_PROTEIN_RECEP_F2_2	UniProtKB/Swiss-Prot
	G_PROTEIN_RECEP_F2_4	UniProtKB/Swiss-Prot
	GPS	UniProtKB/Swiss-Prot
	IG_LIKE	UniProtKB/Swiss-Prot
	SEA	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000011154	RatGTEx
SMART	GPS	UniProtKB/Swiss-Prot
	IGc2	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/Swiss-Prot
	SSF48726	UniProtKB/Swiss-Prot
	SSF82671	UniProtKB/Swiss-Prot
UniProt	A0A0G2JZZ0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AR34	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LF95_RAT	UniProtKB/TrEMBL
	A6JJ39	ENTREZGENE, UniProtKB/TrEMBL
	AGRF5_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-03-16	Adgrf5	adhesion G protein-coupled receptor F5	Gpr116	G protein-coupled receptor 116	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Gpr116	G protein-coupled receptor 116	Gprhep	G protein-coupled hepta-helical receptor Ig-Hepta	Symbol and Name updated	1299863	APPROVED
2004-02-11	Gprhep		Ig-Hepta	G protein-coupled hepta-helical receptor Ig-Hepta	Symbol updated to reflect Human and Mouse nomenclature	625702	APPROVED
2002-08-07	Ig-Hepta	G protein-coupled hepta-helical receptor Ig-Hepta			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains a long extracellular domain comprising Ig-like repeats	625424
gene_expression	expressed predominantly in the lung	625424

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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