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Gene: Myt1l (myelin transcription factor 1-like) Rattus norvegicus

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Symbol:

Myt1l

Name:

myelin transcription factor 1-like

RGD ID:

620550

Description:

Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; retinoic acid-responsive element binding activity; and transition metal ion binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in chromosome. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 39. Orthologous to human MYT1L (myelin transcription factor 1 like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 4,4'-sulfonyldiphenol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

myelin transcription factor 1-like protein; myT1-L; neural zinc finger factor 1; neural zinc finger transcription factor 1; Nzf-1; Nzf1; Nztf1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYT1L (myelin transcription factor 1 like)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Myt1l (myelin transcription factor 1-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Myt1l (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYT1L (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYT1L (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Myt1l (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYT1L (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYT1L (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myt1l (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Myt1l (myelin transcription factor 1 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CEACAM1 (CEA cell adhesion molecule 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	MYT1L (myelin transcription factor 1 like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MYT1L (myelin transcription factor 1 like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Myt1l (myelin transcription factor 1-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myt1la (myelin transcription factor 1-like, a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myt1lb (myelin transcription factor 1-like, b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG43689	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	CG43689	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	ztf-11	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):	myt1l	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myt1l	Alliance	DIOPT (OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	51,892,858 - 52,291,830 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	52,155,754 - 52,291,828 (+)	Ensembl				GRCr8
mRatBN7.2	6	46,164,742 - 46,564,234 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	46,428,150 - 46,561,671 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	46,468,791 - 46,869,128 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	46,783,654 - 47,183,987 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	46,220,555 - 46,619,260 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	48,452,385 - 48,843,443 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	48,452,369 - 48,857,936 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	57,146,300 - 57,530,068 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	47,435,167 - 47,828,030 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	45,383,759 - 45,769,768 (+)	NCBI		Celera
RGSC_v3.1	6	47,438,292 - 47,831,156 (+)	NCBI
Cytogenetic Map	6	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

autosomal dominant intellectual developmental disorder 39 (ISO,ISS)

genetic disease (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

carbamazepine (ISO)

clothianidin (ISO)

diarsenic trioxide (ISO)

entinostat (ISO)

ethanol (ISO)

fulvestrant (ISO)

Licochalcone B (ISO)

manganese atom (EXP,ISO)

manganese(0) (EXP,ISO)

manganese(II) chloride (EXP,ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel atom (ISO)

nitrogen dioxide (ISO)

okadaic acid (ISO)

permethrin (EXP)

potassium dichromate (ISO)

raloxifene (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

tamoxifen (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA)

DNA-templated transcription (IEA)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

nervous system development (IEA,ISO,ISS)

neuron development (IEA,ISO,ISS)

neuron differentiation (IEA,ISO,ISS)

neuron fate commitment (IEA,ISO,ISS)

neuron fate specification (IEA,ISO,ISS)

positive regulation of transcription by RNA polymerase II (IDA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

Cellular Component

chromosome (IEA)

nucleus (IBA,IEA,ISO,ISS)

Molecular Function

cobalt ion binding (IMP)

DNA binding (IDA,IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IDA,IMP)

DNA-binding transcription factor activity (IEA,ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA,IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA,ISO,ISS)

metal ion binding (IEA)

metal ion sequestering activity (EXP,IDA)

protein binding (ISO)

retinoic acid-responsive element binding (IDA,IMP)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA,IMP)

transcription coactivator activity (IDA)

zinc ion binding (EXP,IDA,IEA,IMP)

References

References - curated

#	Reference Title	Reference Citation
1.	X-MyT1, a Xenopus C2HC-type zinc finger protein with a regulatory function in neuronal differentiation.	Bellefroid EJ, etal., Cell 1996 Dec 27;87(7):1191-202.
2.	Metal and DNA binding properties of a two-domain fragment of neural zinc finger factor 1, a CCHC-type zinc binding protein.	Berkovits HJ and Berg JM, Biochemistry. 1999 Dec 21;38(51):16826-30.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	A novel family of Cys-Cys, His-Cys zinc finger transcription factors expressed in developing nervous system and pituitary gland.	Jiang Y, etal., J Biol Chem 1996 May 3;271(18):10723-30.
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9373037	PMID:14744132	PMID:24243019	PMID:25931508	PMID:28379941

Genomics

Comparative Map Data

Myt1l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	51,892,858 - 52,291,830 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	52,155,754 - 52,291,828 (+)	Ensembl				GRCr8
mRatBN7.2	6	46,164,742 - 46,564,234 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	46,428,150 - 46,561,671 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	46,468,791 - 46,869,128 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	46,783,654 - 47,183,987 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	46,220,555 - 46,619,260 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	48,452,385 - 48,843,443 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	48,452,369 - 48,857,936 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	57,146,300 - 57,530,068 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	47,435,167 - 47,828,030 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	45,383,759 - 45,769,768 (+)	NCBI		Celera
RGSC_v3.1	6	47,438,292 - 47,831,156 (+)	NCBI
Cytogenetic Map	6	q16	NCBI

MYT1L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	1,789,113 - 2,331,275 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	1,789,113 - 2,331,664 (-)	Ensembl			hg38	GRCh38
GRCh37	2	1,792,885 - 2,335,047 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	1,771,892 - 2,314,052 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	1,765,601 - 2,305,263	NCBI
Celera	2	1,839,186 - 2,380,235 (-)	NCBI		Celera
Cytogenetic Map	2	p25.3	NCBI
HuRef	2	1,876,277 - 2,319,463 (-)	NCBI		HuRef
HuRef	2	1,777,578 - 1,840,458 (-)	NCBI		HuRef
CHM1_1	2	1,792,613 - 2,334,641 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	1,796,915 - 2,341,550 (-)	NCBI		T2T-CHM13v2.0

Myt1l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	29,578,375 - 29,973,215 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	29,578,383 - 29,973,212 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	29,527,590 - 29,923,216 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	29,528,384 - 29,923,213 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	30,213,249 - 30,608,074 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	30,114,661 - 30,506,785 (+)	NCBI		MGSCv36	mm8
Celera	12	30,988,997 - 31,404,780 (+)	NCBI		Celera
Cytogenetic Map	12	A2	NCBI
cM Map	12	11.86	NCBI

Myt1l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955487	4,725,889 - 4,855,369 (+)	Ensembl
ChiLan1.0	NW_004955487	4,457,145 - 4,855,369 (+)	NCBI	ChiLan1.0	ChiLan1.0

MYT1L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	124,199,786 - 124,760,694 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	124,203,765 - 124,764,671 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	1,744,466 - 2,332,146 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	1,735,673 - 2,272,908 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	1,735,673 - 1,927,123 (-)	Ensembl			panPan2	panpan1.1

MYT1L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	920,727 - 1,325,335 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	922,276 - 1,057,585 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	906,294 - 1,310,944 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	976,597 - 1,381,233 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	977,707 - 1,161,361 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	900,032 - 1,305,084 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	920,369 - 1,325,311 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	921,538 - 1,326,100 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Myt1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	45,802,634 - 46,160,660 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936532	560,327 - 688,232 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936532	557,680 - 916,082 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYT1L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	132,125,508 - 132,294,013 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	131,928,059 - 132,294,015 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	141,580,299 - 141,704,744 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MYT1L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	105,679,736 - 105,891,013 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	105,757,023 - 105,891,025 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	6,091,483 - 6,633,718 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myt1l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624846	6,123,216 - 6,244,031 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624846	5,859,485 - 6,246,771 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Myt1l
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	43,067,788 - 43,359,030 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Myt1l
2956 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	340
Count of miRNA genes:	124
Interacting mature miRNAs:	135
Transcripts:	ENSRNOT00000005905, ENSRNOT00000044310
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9590290	Uminl2	Urine mineral level QTL 2	3.96	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	6	44510974	89510974	Rat
8693632	Alc27	Alcohol consumption QTL 27	2.2	0.791	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	6	40052411	56848866	Rat
634318	Bw118	Body weight QTL 118	3.55		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	6	39028659	63457441	Rat
634307	Bp141	Blood pressure QTL 141	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	40957564	85957564	Rat
10401812	Kidm54	Kidney mass QTL 54			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
1331743	Uae28	Urinary albumin excretion QTL 28	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	45153786	90153786	Rat
8552910	Pigfal5	Plasma insulin-like growth factor 1 level QTL 5	4.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	22653889	67653889	Rat
10401800	Kidm49	Kidney mass QTL 49			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
1331779	Rf38	Renal function QTL 38	2.876		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	31185002	76185002	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	46047353	91047353	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
9590140	Scort4	Serum corticosterone level QTL 4	14.49	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
9590306	Scort18	Serum corticosterone level QTL 18	2.88	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
1578665	Bss16	Bone structure and strength QTL 16	4.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	6	33328841	78328841	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1641898	Colcr4	Colorectal carcinoma resistance QTL4	3.71	0.0007	intestine integrity trait (VT:0010554)	well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)	6	30937632	75937632	Rat
1578668	Bmd14	Bone mineral density QTL 14	3.8		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	6	33328841	78328841	Rat
6893340	Cm77	Cardiac mass QTL 77	0.26	0.57	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	39028659	86867923	Rat
70199	Coreg1	Compensatory renal growth QTL 1	11.8		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	6	14599473	63457687	Rat
2301972	Bp325	Blood pressure QTL 325	4.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	16089372	61967788	Rat
1300143	Rf14	Renal function QTL 14	2.92		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	40163183	85163183	Rat
1354664	Slep2	Serum leptin concentration QTL 2	4.49		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	6	22288257	67288257	Rat

Markers in Region

AU048399

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	46,213,330 - 46,213,605 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	48,494,634 - 48,494,906	NCBI	Rnor6.0
Rnor_5.0	6	57,188,549 - 57,188,821	UniSTS	Rnor5.0
RGSC_v3.4	6	47,477,466 - 47,477,738	UniSTS	RGSC3.4
Celera	6	45,425,994 - 45,426,266	UniSTS
Cytogenetic Map	6	q16	UniSTS

RH139867

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	46,501,820 - 46,502,010 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	48,782,409 - 48,782,598	NCBI	Rnor6.0
Rnor_5.0	6	57,472,793 - 57,472,982	UniSTS	Rnor5.0
Celera	6	45,709,775 - 45,709,964	UniSTS
RH 3.4 Map	6	296.0	UniSTS
Cytogenetic Map	6	q16	UniSTS

Myt1l

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	52,288,544 - 52,289,126 (+)	Marker Load Pipeline
mRatBN7.2	6	46,560,943 - 46,561,525 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	48,842,716 - 48,843,297	NCBI	Rnor6.0
Rnor_5.0	6	57,529,341 - 57,529,922	UniSTS	Rnor5.0
RGSC_v3.4	6	47,827,303 - 47,827,884	UniSTS	RGSC3.4
Celera	6	45,769,041 - 45,769,622	UniSTS
Cytogenetic Map	6	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
10	8	32	147	53	52	23	30	23	5	185	88	6	125	58	78	29	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U48809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U67081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000005905 ⟹ ENSRNOP00000005905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	52,155,754 - 52,289,491 (+)	Ensembl
mRatBN7.2 Ensembl	6	46,428,150 - 46,561,671 (+)	Ensembl
Rnor_6.0 Ensembl	6	48,708,368 - 48,843,296 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000044310 ⟹ ENSRNOP00000045413

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	52,155,754 - 52,291,828 (+)	Ensembl
mRatBN7.2 Ensembl	6	46,428,150 - 46,561,671 (+)	Ensembl
Rnor_6.0 Ensembl	6	48,452,369 - 48,857,936 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095119 ⟹ ENSRNOP00000084839

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	52,155,754 - 52,289,491 (+)	Ensembl
mRatBN7.2 Ensembl	6	46,428,150 - 46,561,671 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103568 ⟹ ENSRNOP00000087359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	52,213,075 - 52,228,514 (+)	Ensembl
mRatBN7.2 Ensembl	6	46,485,588 - 46,501,531 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148709 ⟹ ENSRNOP00000109546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	52,155,754 - 52,291,828 (+)	Ensembl

RefSeq Acc Id:

NM_053888 ⟹ NP_446340

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,082 - 52,291,828 (+)	NCBI
mRatBN7.2	6	46,170,747 - 46,564,227 (+)	NCBI
Rnor_6.0	6	48,452,385 - 48,843,443 (+)	NCBI
Rnor_5.0	6	57,146,300 - 57,530,068 (+)	NCBI
RGSC_v3.4	6	47,435,167 - 47,828,030 (+)	RGD
Celera	6	45,383,759 - 45,769,768 (+)	RGD

Sequence:

show sequence

TCCACCAGGCAGGGCTCTCGACGCATGCCCGTCTTCCCCGGCGTTTAGTGGTGTCAACTTATTA
ATTTCCATCTTCGACTTCAGGCCTGTTAGTTTTCCTGTCTGAAAGCATTATTACTTTTGTCCAT
GTGGCAAAATAATTAGCATACAGATGAGAAGTGGCCCCGTGTCTGCGCGCCGATAGAGAGAAGA
TGTGCGGTTCGAAGTTGATTGGATGAATGGAGAACAAATGGTGGGCGTTCAAAAGCATTAGAAG
AGTTTTGTAGTCGCGCGACGAGGCTGGAGAATTTTCTGGGGGTTCCACAGAGGCTGCAGCTGAG
GTCCAGAAGTGTGCAATTCTCAGCTGCGCTTTGCCCTTCCCAGGGTGACGACTGAAGAATCAGA
GTGTGGAAAAGAACGGTAGGAATTGGTGAGAACATCCAGCTAGCATCTTCAAGTCCTGTGGTGA
GAGGCAGCAGTGCTGGTCCAAAGAGGACCCAGAGAGTGAACTCAGAGTGACCACATCTGGTAGA
AGAGGGGAAGATGTAGTTACTGAGTCCAGTCCAGTGTTTGTGTCTCTCACATTGCCAACAAAAG
AAAGACTCCAGCTGGCCCCACAGACATATGGATATTCCAGGAGCCACGTAAAGATGGAGAAATG
GAGGCACAGAGAAATTAAGTGACTTGGCCACAGTCACAAGCTGGGGAGGACCAGGGAAAGCCTA
AAGAGAGCTGGCTCTGGGCCTCGATCCTGCCCACGGAGTCACCCTGCCTCCGTTCTTGGGAGAG
AAGGCTTCCTACAAGATGGACGTGGACGCTGAGGAGAAGCGCCATCGCACACGGTCCAAAGGGG
TTCGAGTTCCTGTGGAGCCAGCCATACAAGAGCTGTTCAGCTGTCCCACTCCAGGCTGCGACGG
CACGGGTCATGTCAGTGGCAAATATGCACGACACAGAAGTGTATATGGTTGTCCCTTGGCTAAA
AAGAGAAAGACGCAAGATAAACAGCCCCAAGAACCTGCTCCCAAGCGAAAACCATTTGCAGTAA
AAGCAGATAGTTCTTCAGTAGACGAATGCTATGAGAGTGATGGCACTGAAGACATGGATGATAA
GGAAGAGGATGATGATGAGGAGTTCTCTGAAGACAATGATGAGCAAGGGGATGATGATGATGAA
GATGAGGTGGATCGGGAAGACGAGGAGGAGATTGAGGAGGAAGATGATGAAGATGATGAAGATG
ATGATGATGGTGATGATGTAGAAGAGGAAGAAGATGATGATGATGAAGAGGAGGAAGAAGAGGA
AGAGGAAGAAGAAAATGAAGACCATCAAATGAGTTGTACTCGAATAATGCAGGACCCAGAAAAG
GATGATAACAACAATGACGAGTATGATAACTATGATGAACTGGTAGCTAAGTCACTATTAAATC
TTGGCAAAATTGCTGAGGACGCAGCATACCGGGCCAGGACTGAGTCAGAAGTGAACAGCAATAC
CTCCAATAGTCTGGAGGATCATAGTAGCAAAAACGAAAACCTCGGTCGGAAAAGCGAACTGAGT
CTAGACTTAGACAGTGATGTTGTTCGAGAAACAGTGGACTCCCTTAAGCTGTTAGCACAAGGAC
ATGGTGTTGTGCTATCAGAGAACATCAGTGACAGAAGTTATGCTGAGGGGATGTCACAGCAGGA
CAGTAGAAATATGAACTATGTCATGCTAGGGAAGCCCATGAACAATGGACTCATGGAGAAGATG
GTGGAGGAGAGTGATGAGGAGGTGTGTCTAAGTAGTCTTGAGTGCCTGAGGAACCAGTGCTTTG
ACCTGGCCAGGAAACTCAGCGAGACCAACCCGCAGGACAGGAGTCAGCCACCCAACATGAGTGT
GCGCCAACATGTCCGGCAAGAGGACGACTTCCCTGGGAGGACGCCAGACAGGAGCTACTCGGAT
ATGATGAACCTTATGCGGCTGGAGGAGCAGCTAAGCCCCAGGTCTAGAACGTTCTCCAGCTGTG
CCAAGGAGGATGGGTGTCATGAGAGGGATGATGACACCACCACAGTGAACTCAGACAGGTCTGA
GGAAGTATTTGACATGACCAAGGGCAACCTGACTCTGCTAGAGAAAGCCATTGCCTTGGAGACA
GAGAGAGCCAAGGCCATGCGAGAGAAGATGGCCATGGATGCTGGGAGAAGGGATAACCTGAGAT
CCTATGAGGACCAGTCTCCAAGACAGCTGGCTGGGGAAGACAGAAAATCCAAATCCAGTGACAG
CCATGTCAAAAAGCCATACTATGATCCCTCAAGAACAGAAAAGAGAGAGAGCAAGTGTCCAACC
CCCGGGTGTGATGGAACCGGCCACGTAAATGGGCTTTACCCGCATCACCGCAGTCTGTCTGGAT
GCCCGCACAAAGATAGGGTCCCTCCAGAAATTCTTGCCATGCATGAAAATGTTCTCAAGTGTCC
CACTCCAGGCTGCACAGGGCGAGGGCATGTGAATAGCAACAGGAACTCGCACAGAAGCCTCTCT
GGATGCCCTATTGCTGCTGCAGAAAAACTGGCAAAGGCCCAGGAGAAACATCAGAGCTGTGATG
TGTCCAAATCCAACCAGGCCTCAGACCGAGTCCTCAGGCCAATGTGCTTTGTCAAACAGCTTGA
GATTCCTCAGTATGGCTACAGAAACAATGTTCCCACAACTACACCGCGCTCCAACCTGGCCAAG
GAGCTTGAGAAATATTCCAAGACTTCGTTTGAGTACAACAGTTACGACAACCATACTTATGGCA
AAAGAGCCATAGCTCCAAGGTGCAAACCAGGGACATATCCCCCAAAGGATATGACGATGCCAAG
CGGTACTGGCAAGAATGCCAGCCCCAGCAGCAGCACCACCAGCAGCTATGCACCCAGCAGCAGC
AGCAACCTCAGCTGTGGTGGTGGCAGCAGTGCCAGTAGCACGTGTAGCAAGAGCAGCTTTGACT
ACACACATGACATGGAGGCCGCACACATGGCAGCCACAGCCATTCTCAACCTGTCCACACGTTG
CCGGGAAATGCCACAGAACCTGTCCACCAAGCCACAGGACCTGTGCACTGCCCGGAACCCAGAC
ATGGAGGTGGATGAGAATGGCACCCTGGACCTGAGCATGAACAAGCAGAGGCCTCGAGACAGCT
GCTGCCCAGTCCTGACACCCCTGGAGCCCATGTCCCCCCAGCAGCAGGCAGTGATGAGCAGCCG
ATGCTTCCAACTGAGCGAGGGGGATTGTTGGGACTTACCCGTAGACTACACCAAAATGAAGCCT
CGGAGGGTAGATGAGGAGGACCCCAAAGAGATTACCCCAGAAGACTTGGACCCATTCCAGGAGG
CTCTGGAAGAAAGAAGATATCCAGGGGAGGTGACCATCCCAAGCCCCAAACCCAAGTACCCTCA
ATGCAAGGAAAGCAAAAAGGACTTAATAACTCTGTCTGGCTGCCCCCTGGCGGACAAAAGCATT
CGAAGTATGCTGGCCACCAGTTCCCAAGAGCTCAAGTGCCCCACCCCTGGCTGTGACGGTTCTG
GACACATCACTGGCAATTACGCTTCTCATCGAAGCCTTTCCGGGTGCCCAAGAGCAAAGAAGAG
TGGTATCCGGATAGCACAAAGCAAAGAAGACAAGGAAGACCAGGAGCCAATCAGGTGTCCGGTA
CCTGGCTGTGATGGTCAGGGACATATCACTGGGAAGTACGCATCCCACCGCAGCGCCTCTGGGT
GCCCCTTGGCAGCCAAGAGGCAGAAAGATGGGTACCTTAATGGCTCCCAGTTCTCCTGGAAGTC
AGTCAAGACAGAGGGCATGTCCTGCCCTACACCCGGGTGTGATGGGTCAGGACACGTCAGTGGC
AGCTTCCTCACACACCGCAGCTTGTCAGGATGTCCAAGAGCCACATCAGCAATGAAGAAAGCAA
AGCTGTCTGGAGAACAGATGTTGACTATCAAGCAGCGAGCCAGCAACGGTATAGAAAACGATGA
GGAGATCAAGCAGTTGGATGAAGAGATCAAGGAGCTCAATGAGTCCAATTCCCAGATGGAGGCC
GACATGATCAAACTCAGAACTCAGGTAACAATCACCACAATGGAGAGCAACCTGAAGACGATTG
AGGAGGAGAACAAAGTCATTGAGCAGCAGAATGAGTCGCTCCTGCACGAGTTGGCCAACCTGAG
CCAGTCCCTGATCCACAGCCTCGCCAACATCCAGCTGCCTCACATGGATCCAATCAATGAACAA
AATTTTGATGCTTACGTGACTACTTTGACGGAAATGTATACAAATCAAGATCGTTATCAGAGTC
CAGAAAATAAAGCCCTACTGGAAAATATAAAGCAGGCTGTGAGAGGAATTCAGGTCTGAACAGC
TGCTCTAGTGGTGACTCATGCTTAAAAAGGATGCCTCTTGTTTCTTGCTGCTGTAACTTACCAG
AAAGTGTTATATATTTATTTCTGTCGGAACAGTGTTATGCTACAAGACTTCATAATGGTTTTGT
GTGCTCTCGAG

hide sequence

RefSeq Acc Id:

XM_039111667 ⟹ XP_038967595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,171,381 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111668 ⟹ XP_038967596

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,892,858 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,164,742 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111669 ⟹ XP_038967597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,897,665 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,169,397 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111670 ⟹ XP_038967598

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,686 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111671 ⟹ XP_038967599

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,900,429 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,172,069 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111672 ⟹ XP_038967600

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,688 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_039111673 ⟹ XP_038967601

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,686 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111675 ⟹ XP_038967603

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,280 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,171,381 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111676 ⟹ XP_038967604

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,893,077 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,164,742 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111677 ⟹ XP_038967605

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,897,627 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,169,397 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111678 ⟹ XP_038967606

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,686 - 46,561,527 (+)	NCBI

RefSeq Acc Id:

XM_039111680 ⟹ XP_038967608

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,036 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,694 - 46,561,896 (+)	NCBI

RefSeq Acc Id:

XM_039111681 ⟹ XP_038967609

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,688 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_039111682 ⟹ XP_038967610

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,892,867 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,164,742 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_039111683 ⟹ XP_038967611

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,024 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,682 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_039111684 ⟹ XP_038967612

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,024 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,680 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_039111686 ⟹ XP_038967614

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,027 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,686 - 46,562,137 (+)	NCBI

RefSeq Acc Id:

XM_039111687 ⟹ XP_038967615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,033 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,691 - 46,562,137 (+)	NCBI

RefSeq Acc Id:

XM_039111689 ⟹ XP_038967617

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,027 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,686 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_039111690 ⟹ XP_038967618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,027 - 52,291,830 (+)	NCBI
mRatBN7.2	6	46,170,687 - 46,564,234 (+)	NCBI

RefSeq Acc Id:

XM_063261459 ⟹ XP_063117529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261460 ⟹ XP_063117530

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,892,867 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261461 ⟹ XP_063117531

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,900,429 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261462 ⟹ XP_063117532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,033 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261463 ⟹ XP_063117533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,897,665 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261464 ⟹ XP_063117534

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,892,858 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261465 ⟹ XP_063117535

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,031 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261466 ⟹ XP_063117536

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,031 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261467 ⟹ XP_063117537

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,031 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261468 ⟹ XP_063117538

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,036 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261469 ⟹ XP_063117539

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,897,665 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261470 ⟹ XP_063117540

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,036 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261471 ⟹ XP_063117541

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,280 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261473 ⟹ XP_063117543

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,897,697 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261474 ⟹ XP_063117544

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261475 ⟹ XP_063117545

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,900,422 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261476 ⟹ XP_063117546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261477 ⟹ XP_063117547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261478 ⟹ XP_063117548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,028 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261479 ⟹ XP_063117549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,029 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261480 ⟹ XP_063117550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,033 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261481 ⟹ XP_063117551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,031 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261482 ⟹ XP_063117552

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,892,868 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261483 ⟹ XP_063117553

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,031 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261484 ⟹ XP_063117554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,031 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261485 ⟹ XP_063117555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,280 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261486 ⟹ XP_063117556

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,029 - 52,288,978 (+)	NCBI

RefSeq Acc Id:

XM_063261487 ⟹ XP_063117557

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,899,032 - 52,291,830 (+)	NCBI

RefSeq Acc Id:

XM_063261488 ⟹ XP_063117558

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	51,892,858 - 52,291,830 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_446340	(Get FASTA)	NCBI Sequence Viewer
	XP_038967595	(Get FASTA)	NCBI Sequence Viewer
	XP_038967596	(Get FASTA)	NCBI Sequence Viewer
	XP_038967597	(Get FASTA)	NCBI Sequence Viewer
	XP_038967598	(Get FASTA)	NCBI Sequence Viewer
	XP_038967599	(Get FASTA)	NCBI Sequence Viewer
	XP_038967600	(Get FASTA)	NCBI Sequence Viewer
	XP_038967601	(Get FASTA)	NCBI Sequence Viewer
	XP_038967603	(Get FASTA)	NCBI Sequence Viewer
	XP_038967604	(Get FASTA)	NCBI Sequence Viewer
	XP_038967605	(Get FASTA)	NCBI Sequence Viewer
	XP_038967606	(Get FASTA)	NCBI Sequence Viewer
	XP_038967608	(Get FASTA)	NCBI Sequence Viewer
	XP_038967609	(Get FASTA)	NCBI Sequence Viewer
	XP_038967610	(Get FASTA)	NCBI Sequence Viewer
	XP_038967611	(Get FASTA)	NCBI Sequence Viewer
	XP_038967612	(Get FASTA)	NCBI Sequence Viewer
	XP_038967614	(Get FASTA)	NCBI Sequence Viewer
	XP_038967615	(Get FASTA)	NCBI Sequence Viewer
	XP_038967617	(Get FASTA)	NCBI Sequence Viewer
	XP_038967618	(Get FASTA)	NCBI Sequence Viewer
	XP_063117529	(Get FASTA)	NCBI Sequence Viewer
	XP_063117530	(Get FASTA)	NCBI Sequence Viewer
	XP_063117531	(Get FASTA)	NCBI Sequence Viewer
	XP_063117532	(Get FASTA)	NCBI Sequence Viewer
	XP_063117533	(Get FASTA)	NCBI Sequence Viewer
	XP_063117534	(Get FASTA)	NCBI Sequence Viewer
	XP_063117535	(Get FASTA)	NCBI Sequence Viewer
	XP_063117536	(Get FASTA)	NCBI Sequence Viewer
	XP_063117537	(Get FASTA)	NCBI Sequence Viewer
	XP_063117538	(Get FASTA)	NCBI Sequence Viewer
	XP_063117539	(Get FASTA)	NCBI Sequence Viewer
	XP_063117540	(Get FASTA)	NCBI Sequence Viewer
	XP_063117541	(Get FASTA)	NCBI Sequence Viewer
	XP_063117543	(Get FASTA)	NCBI Sequence Viewer
	XP_063117544	(Get FASTA)	NCBI Sequence Viewer
	XP_063117545	(Get FASTA)	NCBI Sequence Viewer
	XP_063117546	(Get FASTA)	NCBI Sequence Viewer
	XP_063117547	(Get FASTA)	NCBI Sequence Viewer
	XP_063117548	(Get FASTA)	NCBI Sequence Viewer
	XP_063117549	(Get FASTA)	NCBI Sequence Viewer
	XP_063117550	(Get FASTA)	NCBI Sequence Viewer
	XP_063117551	(Get FASTA)	NCBI Sequence Viewer
	XP_063117552	(Get FASTA)	NCBI Sequence Viewer
	XP_063117553	(Get FASTA)	NCBI Sequence Viewer
	XP_063117554	(Get FASTA)	NCBI Sequence Viewer
	XP_063117555	(Get FASTA)	NCBI Sequence Viewer
	XP_063117556	(Get FASTA)	NCBI Sequence Viewer
	XP_063117557	(Get FASTA)	NCBI Sequence Viewer
	XP_063117558	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB40718	(Get FASTA)	NCBI Sequence Viewer
	AAC52728	(Get FASTA)	NCBI Sequence Viewer
	EDM03231	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000005905
	ENSRNOP00000045413
	ENSRNOP00000084839
	ENSRNOP00000109546
GenBank Protein	P70475	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_446340 ⟸ NM_053888

- UniProtKB:

P70475 (UniProtKB/Swiss-Prot), D4A9W2 (UniProtKB/Swiss-Prot), P70589 (UniProtKB/Swiss-Prot), F1M8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDVDAEEKRHRTRSKGVRVPVEPAIQELFSCPTPGCDGTGHVSGKYARHRSVYGCPLAKKRKTQ
DKQPQEPAPKRKPFAVKADSSSVDECYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDR
EDEEEIEEEDDEDDEDDDDGDDVEEEEDDDDEEEEEEEEEEENEDHQMSCTRIMQDPEKDDNNN
DEYDNYDELVAKSLLNLGKIAEDAAYRARTESEVNSNTSNSLEDHSSKNENLGRKSELSLDLDS
DVVRETVDSLKLLAQGHGVVLSENISDRSYAEGMSQQDSRNMNYVMLGKPMNNGLMEKMVEESD
EEVCLSSLECLRNQCFDLARKLSETNPQDRSQPPNMSVRQHVRQEDDFPGRTPDRSYSDMMNLM
RLEEQLSPRSRTFSSCAKEDGCHERDDDTTTVNSDRSEEVFDMTKGNLTLLEKAIALETERAKA
MREKMAMDAGRRDNLRSYEDQSPRQLAGEDRKSKSSDSHVKKPYYDPSRTEKRESKCPTPGCDG
TGHVNGLYPHHRSLSGCPHKDRVPPEILAMHENVLKCPTPGCTGRGHVNSNRNSHRSLSGCPIA
AAEKLAKAQEKHQSCDVSKSNQASDRVLRPMCFVKQLEIPQYGYRNNVPTTTPRSNLAKELEKY
SKTSFEYNSYDNHTYGKRAIAPRCKPGTYPPKDMTMPSGTGKNASPSSSTTSSYAPSSSSNLSC
GGGSSASSTCSKSSFDYTHDMEAAHMAATAILNLSTRCREMPQNLSTKPQDLCTARNPDMEVDE
NGTLDLSMNKQRPRDSCCPVLTPLEPMSPQQQAVMSSRCFQLSEGDCWDLPVDYTKMKPRRVDE
EDPKEITPEDLDPFQEALEERRYPGEVTIPSPKPKYPQCKESKKDLITLSGCPLADKSIRSMLA
TSSQELKCPTPGCDGSGHITGNYASHRSLSGCPRAKKSGIRIAQSKEDKEDQEPIRCPVPGCDG
QGHITGKYASHRSASGCPLAAKRQKDGYLNGSQFSWKSVKTEGMSCPTPGCDGSGHVSGSFLTH
RSLSGCPRATSAMKKAKLSGEQMLTIKQRASNGIENDEEIKQLDEEIKELNESNSQMEADMIKL
RTQVTITTMESNLKTIEEENKVIEQQNESLLHELANLSQSLIHSLANIQLPHMDPINEQNFDAY
VTTLTEMYTNQDRYQSPENKALLENIKQAVRGIQV

hide sequence

Ensembl Acc Id:

ENSRNOP00000045413 ⟸ ENSRNOT00000044310

Ensembl Acc Id:

ENSRNOP00000005905 ⟸ ENSRNOT00000005905

RefSeq Acc Id:	XP_038967610 ⟸ XM_039111682
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967596 ⟸ XM_039111668
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967604 ⟸ XM_039111676
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967597 ⟸ XM_039111669
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967605 ⟸ XM_039111677
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967612 ⟸ XM_039111684
- Peptide Label:	isoform X11
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967611 ⟸ XM_039111683
- Peptide Label:	isoform X6
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967617 ⟸ XM_039111689
- Peptide Label:	isoform X15
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967614 ⟸ XM_039111686
- Peptide Label:	isoform X12
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967601 ⟸ XM_039111673
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967598 ⟸ XM_039111670
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967606 ⟸ XM_039111678
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967618 ⟸ XM_039111690
- Peptide Label:	isoform X17
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967600 ⟸ XM_039111672
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967609 ⟸ XM_039111681
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967615 ⟸ XM_039111687
- Peptide Label:	isoform X13
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967608 ⟸ XM_039111680
- Peptide Label:	isoform X4
- UniProtKB:	A6HB26 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967595 ⟸ XM_039111667
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967603 ⟸ XM_039111675
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967599 ⟸ XM_039111671
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000087359 ⟸ ENSRNOT00000103568

Ensembl Acc Id:

ENSRNOP00000084839 ⟸ ENSRNOT00000095119

RefSeq Acc Id:	XP_063117534 ⟸ XM_063261464
- Peptide Label:	isoform X3
- UniProtKB:	P70589 (UniProtKB/Swiss-Prot), P70475 (UniProtKB/Swiss-Prot), D4A9W2 (UniProtKB/Swiss-Prot), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117558 ⟸ XM_063261488
- Peptide Label:	isoform X18
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117530 ⟸ XM_063261460
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117552 ⟸ XM_063261482
- Peptide Label:	isoform X9
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117533 ⟸ XM_063261463
- Peptide Label:	isoform X2
- UniProtKB:	A0A5H1ZRT6 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117539 ⟸ XM_063261469
- Peptide Label:	isoform X4
- UniProtKB:	A6HB26 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117543 ⟸ XM_063261473
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117529 ⟸ XM_063261459
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117546 ⟸ XM_063261476
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117547 ⟸ XM_063261477
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117544 ⟸ XM_063261474
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117548 ⟸ XM_063261478
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117549 ⟸ XM_063261479
- Peptide Label:	isoform X7
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117556 ⟸ XM_063261486
- Peptide Label:	isoform X14
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117536 ⟸ XM_063261466
- Peptide Label:	isoform X3
- UniProtKB:	P70589 (UniProtKB/Swiss-Prot), P70475 (UniProtKB/Swiss-Prot), D4A9W2 (UniProtKB/Swiss-Prot), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117551 ⟸ XM_063261481
- Peptide Label:	isoform X9
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117537 ⟸ XM_063261467
- Peptide Label:	isoform X3
- UniProtKB:	P70589 (UniProtKB/Swiss-Prot), P70475 (UniProtKB/Swiss-Prot), D4A9W2 (UniProtKB/Swiss-Prot), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117554 ⟸ XM_063261484
- Peptide Label:	isoform X9
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117535 ⟸ XM_063261465
- Peptide Label:	isoform X3
- UniProtKB:	P70589 (UniProtKB/Swiss-Prot), P70475 (UniProtKB/Swiss-Prot), D4A9W2 (UniProtKB/Swiss-Prot), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117553 ⟸ XM_063261483
- Peptide Label:	isoform X9
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117557 ⟸ XM_063261487
- Peptide Label:	isoform X16
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117532 ⟸ XM_063261462
- Peptide Label:	isoform X2
- UniProtKB:	A0A5H1ZRT6 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117550 ⟸ XM_063261480
- Peptide Label:	isoform X8
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117538 ⟸ XM_063261468
- Peptide Label:	isoform X4
- UniProtKB:	A6HB26 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117540 ⟸ XM_063261470
- Peptide Label:	isoform X4
- UniProtKB:	A6HB26 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117541 ⟸ XM_063261471
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117555 ⟸ XM_063261485
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6A056 (UniProtKB/TrEMBL), F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117545 ⟸ XM_063261475
- Peptide Label:	isoform X5
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117531 ⟸ XM_063261461
- Peptide Label:	isoform X1
- UniProtKB:	F1M8L4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000109546 ⟸ ENSRNOT00000148709

Protein Domains

Myelin transcription factor

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P70475-F1-model_v2	AlphaFold	P70475	1-1187	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620550	AgrOrtholog
BioCyc Gene	G2FUF-37939	BioCyc
Ensembl Genes	ENSRNOG00000004269	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000005905	ENTREZGENE
	ENSRNOT00000044310	ENTREZGENE
	ENSRNOT00000095119	ENTREZGENE
	ENSRNOT00000148709	ENTREZGENE
Gene3D-CATH	4.10.320.30	UniProtKB/Swiss-Prot
InterPro	Myelin_TF	UniProtKB/Swiss-Prot
	Znf_C2H2C	UniProtKB/Swiss-Prot
	Znf_C2H2C_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:116668	UniProtKB/Swiss-Prot
NCBI Gene	116668	ENTREZGENE
PANTHER	MYELIN TRANSCRIPTION FACTOR 1-LIKE PROTEIN	UniProtKB/Swiss-Prot
	MYELIN TRANSCRIPTION FACTOR 1-RELATED	UniProtKB/Swiss-Prot
Pfam	MYT1	UniProtKB/Swiss-Prot
	zf-C2HC	UniProtKB/Swiss-Prot
PhenoGen	Myt1l	PhenoGen
PROSITE	ZF_CCHHC	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000004269	RatGTEx
Superfamily-SCOP	SSF103637	UniProtKB/Swiss-Prot
UniProt	A0A5H1ZRT6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A056	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A7T9_RAT	UniProtKB/TrEMBL
	A6HB26	ENTREZGENE, UniProtKB/TrEMBL
	D4A9W2	ENTREZGENE
	F1M8L4	ENTREZGENE, UniProtKB/TrEMBL
	MYT1L_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	P70589	ENTREZGENE
UniProt Secondary	D4A9W2	UniProtKB/Swiss-Prot
	P70589	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-02-26	Myt1l	myelin transcription factor 1-like			Symbol and Name status set to approved	625702	APPROVED
2002-08-07	Myt1l	myelin transcription factor 1-like			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains six Cys-Cys, His-Cys zinc fingers	633486

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM