Fut2 (fucosyltransferase 2) - Rat Genome Database

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Gene: Fut2 (fucosyltransferase 2) Rattus norvegicus
Analyze
Symbol: Fut2
Name: fucosyltransferase 2
RGD ID: 2639
Description: Enables galactoside 2-alpha-L-fucosyltransferase activity. Involved in glycoprotein biosynthetic process. Predicted to be located in Golgi apparatus. Human ortholog(s) of this gene implicated in vitamin B12 deficiency. Orthologous to human FUT2 (fucosyltransferase 2 (H blood group)); PARTICIPATES IN globoside metabolic pathway; lacto-series glycosphingolipid metabolic pathway; INTERACTS WITH 1,3-dinitrobenzene; 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha 1,2-fucosyltransferase B; alpha 1-2 fucosyltransferase; alpha 12-fucosyltransferase C; alpha 12-fucosyltransferase C gene; alpha(1,2)FT 2; alpha1,2-fucosyltransferase b; Alpha12-fucosyltransferase b; Ftc; fucosyltransferase 2 (secretor status included); Futb; galactoside 2-alpha-L-fucosyltransferase 2; galactoside alpha-(1,2)-fucosyltransferase 2; GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2; secretor blood group alpha-2-fucosyltransferase; type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2; type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2
RGD Orthologs
Human
Mouse
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,256,013 - 105,276,828 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1105,255,390 - 105,276,647 (-)EnsemblGRCr8
mRatBN7.2196,119,549 - 96,139,567 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,119,371 - 96,140,360 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1101,504,993 - 101,524,997 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,977,690 - 109,997,695 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,268,063 - 103,288,070 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1103,892,709 - 103,912,714 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1109,002,838 - 109,022,843 (-)NCBILyon_Normotensive
Lyon_Hypertensive1105,536,130 - 105,556,135 (-)NCBILyon_Hypertensive
F344_StmMcwi1103,992,796 - 104,012,807 (-)NCBIF344_StmMcwi
Rnor_6.01101,631,633 - 101,651,668 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,631,635 - 101,651,668 (-)Ensemblrn6Rnor6.0
Rnor_5.01102,710,413 - 102,731,324 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4196,118,530 - 96,137,450 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera190,373,207 - 90,392,770 (-)NCBICelera
RGSC_v3.1196,196,640 - 96,215,561 (-)NCBI
Cytogenetic Map1q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Comparison of the three rat GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferases FTA, FTB and FTC. Bureau V, etal., Eur J Biochem 2001 Feb;268(4):1006-19.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Evidence for two distinct alpha(1,2)-fucosyltransferase genes differentially expressed throughout the rat colon. Piau JP, etal., Biochem J 1994 Jun 15;300 ( Pt 3):623-6.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Cloning and expression of the catalytic domain from rat hepatoma H35 cell GDP-fucose:GM1 alpha 1-->2fucosyltransferase, an enzyme which is activated during early stages of chemical carcinogenesis in rat liver. Sherwood AL and Holmes EH, Arch Biochem Biophys 1998 Jul 15;355(2):215-21.
11. An amino acid region at the N-terminus of rat hepatoma alpha1-->2 fucosyltransferase modulates enzyme activity and interaction with lipids: strong preference for glycosphingolipids containing terminal Galbeta1-->3GalNAc-structures. Sherwood AL, etal., Biochemistry 2001 May 15;40(19):5708-19.
Additional References at PubMed
PMID:11018479   PMID:11323419   PMID:11368156   PMID:11713270   PMID:14967068   PMID:19199708   PMID:21172308  


Genomics

Comparative Map Data
Fut2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,256,013 - 105,276,828 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1105,255,390 - 105,276,647 (-)EnsemblGRCr8
mRatBN7.2196,119,549 - 96,139,567 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,119,371 - 96,140,360 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1101,504,993 - 101,524,997 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,977,690 - 109,997,695 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,268,063 - 103,288,070 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1103,892,709 - 103,912,714 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1109,002,838 - 109,022,843 (-)NCBILyon_Normotensive
Lyon_Hypertensive1105,536,130 - 105,556,135 (-)NCBILyon_Hypertensive
F344_StmMcwi1103,992,796 - 104,012,807 (-)NCBIF344_StmMcwi
Rnor_6.01101,631,633 - 101,651,668 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,631,635 - 101,651,668 (-)Ensemblrn6Rnor6.0
Rnor_5.01102,710,413 - 102,731,324 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4196,118,530 - 96,137,450 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera190,373,207 - 90,392,770 (-)NCBICelera
RGSC_v3.1196,196,640 - 96,215,561 (-)NCBI
Cytogenetic Map1q22NCBI
FUT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,695,971 - 48,705,951 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,695,957 - 48,705,951 (+)Ensemblhg38GRCh38
GRCh371949,199,228 - 49,209,208 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,891,040 - 53,901,019 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341953,891,049 - 53,901,019NCBI
Celera1946,065,327 - 46,075,291 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,578,136 - 45,588,563 (+)NCBIHuRef
CHM1_11949,200,850 - 49,210,957 (+)NCBICHM1_1
T2T-CHM13v2.01951,690,377 - 51,700,359 (+)NCBIT2T-CHM13v2.0
Fut2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,298,015 - 45,315,818 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,298,015 - 45,315,818 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38745,648,591 - 45,666,394 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,648,591 - 45,666,394 (-)Ensemblmm10GRCm38
MGSCv37752,903,965 - 52,921,678 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36745,516,637 - 45,534,350 (-)NCBIMGSCv36mm8
Celera741,110,141 - 41,128,769 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.41NCBI
Fut2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555591,857,138 - 1,868,315 (-)NCBIChiLan1.0ChiLan1.0
FUT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,616,477 - 107,626,968 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,136,825 - 107,149,040 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01108,139,035 - 108,151,317 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,141,168 - 108,142,187 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,805,864 - 107,817,992 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,452,993 - 107,465,228 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,288,606 - 108,300,731 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Fut2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,101,454 - 21,112,807 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,727,663 - 2,728,688 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,727,163 - 2,729,094 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FUT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,034,684 - 54,047,224 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1654,034,666 - 54,044,891 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,782,007 - 49,792,235 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap6q11-q21NCBI
FUT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,943,445 - 41,955,953 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl641,954,742 - 41,955,803 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366607321,816,101 - 21,825,164 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fut2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248325,199,424 - 5,208,456 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Fut2
266 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:232
Count of miRNA genes:156
Interacting mature miRNAs:189
Transcripts:ENSRNOT00000028519
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)187889942132889942Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1102780511182384005Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)192963855109494029Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1101228864146228864Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)191302413136302413Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1102359314153680016Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)199645382182701046Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)192683681137683681Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)192683681137683681Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)197582336142582336Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1101594089146594089Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1100345976145345976Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)196717367160111531Rat

Markers in Region
AI012386  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2196,119,674 - 96,119,801 (+)MAPPERmRatBN7.2
Rnor_6.01101,631,759 - 101,631,885NCBIRnor6.0
Rnor_5.01102,710,539 - 102,710,665UniSTSRnor5.0
RGSC_v3.4196,118,654 - 96,118,780UniSTSRGSC3.4
Celera190,373,331 - 90,373,457UniSTS
RH 3.4 Map1908.89UniSTS
Cytogenetic Map1q22-q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 50 117 76 75 44 85 44 6 288 168 11 89 52 83 31 9 9

Sequence


Ensembl Acc Id: ENSRNOT00000028519   ⟹   ENSRNOP00000028519
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,256,015 - 105,276,027 (-)Ensembl
mRatBN7.2 Ensembl196,119,551 - 96,139,567 (-)Ensembl
Rnor_6.0 Ensembl1101,631,635 - 101,651,668 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000094479   ⟹   ENSRNOP00000095298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,256,820 - 105,274,176 (-)Ensembl
mRatBN7.2 Ensembl196,119,524 - 96,140,343 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097049   ⟹   ENSRNOP00000093031
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,255,915 - 105,276,647 (-)Ensembl
mRatBN7.2 Ensembl196,119,371 - 96,140,360 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000099964   ⟹   ENSRNOP00000081835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,255,390 - 105,274,255 (-)Ensembl
mRatBN7.2 Ensembl196,119,462 - 96,132,295 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101535   ⟹   ENSRNOP00000091583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,256,013 - 105,267,476 (-)Ensembl
mRatBN7.2 Ensembl196,119,568 - 96,137,585 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101707   ⟹   ENSRNOP00000092055
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,256,835 - 105,274,255 (-)Ensembl
mRatBN7.2 Ensembl196,119,524 - 96,140,343 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102909   ⟹   ENSRNOP00000087313
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl196,119,462 - 96,140,360 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105627   ⟹   ENSRNOP00000090817
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,255,951 - 105,276,647 (-)Ensembl
mRatBN7.2 Ensembl196,119,371 - 96,140,360 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000139851   ⟹   ENSRNOP00000111224
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,257,418 - 105,274,121 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000164204   ⟹   ENSRNOP00000107581
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1105,257,726 - 105,266,638 (-)Ensembl
RefSeq Acc Id: NM_031635   ⟹   NP_113823
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,256,015 - 105,276,027 (-)NCBI
mRatBN7.2196,119,551 - 96,139,567 (-)NCBI
Dahl_SR_JrHsd1103,892,709 - 103,912,714 (-)NCBI
Lyon_Normotensive1109,002,838 - 109,022,843 (-)NCBI
Lyon_Hypertensive1105,536,130 - 105,556,135 (-)NCBI
F344_StmMcwi1103,992,796 - 104,012,807 (-)NCBI
Rnor_6.01101,631,635 - 101,651,668 (-)NCBI
Rnor_5.01102,710,413 - 102,731,324 (-)NCBI
RGSC_v3.4196,118,530 - 96,137,450 (-)RGD
Celera190,373,207 - 90,392,770 (-)RGD
Sequence:
RefSeq Acc Id: XM_039088769   ⟹   XP_038944697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,256,013 - 105,268,204 (-)NCBI
mRatBN7.2196,119,549 - 96,131,827 (-)NCBI
RefSeq Acc Id: XM_063272138   ⟹   XP_063128208
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,256,013 - 105,276,828 (-)NCBI
RefSeq Acc Id: XM_063272145   ⟹   XP_063128215
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81105,256,013 - 105,266,991 (-)NCBI
RefSeq Acc Id: NP_113823   ⟸   NM_031635
- UniProtKB: Q9R275 (UniProtKB/Swiss-Prot),   Q9JK44 (UniProtKB/Swiss-Prot),   Q10984 (UniProtKB/Swiss-Prot),   O35087 (UniProtKB/Swiss-Prot),   A0A0G2JSS7 (UniProtKB/TrEMBL),   A6JB65 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000028519   ⟸   ENSRNOT00000028519
RefSeq Acc Id: XP_038944697   ⟸   XM_039088769
- Peptide Label: isoform X1
- UniProtKB: Q9R275 (UniProtKB/Swiss-Prot),   Q9JK44 (UniProtKB/Swiss-Prot),   Q10984 (UniProtKB/Swiss-Prot),   O35087 (UniProtKB/Swiss-Prot),   A0A0G2JSS7 (UniProtKB/TrEMBL),   A6JB65 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000095298   ⟸   ENSRNOT00000094479
Ensembl Acc Id: ENSRNOP00000093031   ⟸   ENSRNOT00000097049
Ensembl Acc Id: ENSRNOP00000090817   ⟸   ENSRNOT00000105627
Ensembl Acc Id: ENSRNOP00000087313   ⟸   ENSRNOT00000102909
Ensembl Acc Id: ENSRNOP00000081835   ⟸   ENSRNOT00000099964
Ensembl Acc Id: ENSRNOP00000091583   ⟸   ENSRNOT00000101535
Ensembl Acc Id: ENSRNOP00000092055   ⟸   ENSRNOT00000101707
RefSeq Acc Id: XP_063128208   ⟸   XM_063272138
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063128215   ⟸   XM_063272145
- Peptide Label: isoform X1
- UniProtKB: Q9R275 (UniProtKB/Swiss-Prot),   Q9JK44 (UniProtKB/Swiss-Prot),   Q10984 (UniProtKB/Swiss-Prot),   O35087 (UniProtKB/Swiss-Prot),   A0A0G2JSS7 (UniProtKB/TrEMBL),   A6JB65 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000111224   ⟸   ENSRNOT00000139851
Ensembl Acc Id: ENSRNOP00000107581   ⟸   ENSRNOT00000164204

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q10984-F1-model_v2 AlphaFold Q10984 1-354 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690049
Promoter ID:EPDNEW_R573
Type:initiation region
Name:Fut2_1
Description:fucosyltransferase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01101,651,677 - 101,651,737EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2639 AgrOrtholog
BioCyc Gene G2FUF-59659 BioCyc
Ensembl Genes ENSRNOG00000021011 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000028519 ENTREZGENE
  ENSRNOT00000097049 ENTREZGENE
  ENSRNOT00000099964 ENTREZGENE
  ENSRNOT00000101535 ENTREZGENE
InterPro Glyco_trans_11 UniProtKB/Swiss-Prot
KEGG Report rno:58924 UniProtKB/Swiss-Prot
NCBI Gene Fut2 ENTREZGENE
PANTHER GALACTOSIDE ALPHA-(1,2)-FUCOSYLTRANSFERASE 2 UniProtKB/Swiss-Prot
  PTHR11927 UniProtKB/Swiss-Prot
Pfam Glyco_transf_11 UniProtKB/Swiss-Prot
PhenoGen Fut2 PhenoGen
RatGTEx ENSRNOG00000021011 RatGTEx
UniProt A0A0G2JSS7 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LYH2_RAT UniProtKB/TrEMBL
  A6JB65 ENTREZGENE, UniProtKB/TrEMBL
  FUT2_RAT UniProtKB/Swiss-Prot
  O35087 ENTREZGENE
  Q10984 ENTREZGENE
  Q9JK44 ENTREZGENE
  Q9R275 ENTREZGENE
UniProt Secondary O35087 UniProtKB/Swiss-Prot
  Q9JK44 UniProtKB/Swiss-Prot
  Q9R275 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-02 Fut2  fucosyltransferase 2  Fut2  fucosyltransferase 2 (secretor status included)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-18 Fut2  fucosyltransferase 2 (secretor status included)  Fut2  fucosyltransferase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-15 Fut2  fucosyltransferase 2  Fut2  fucosyltransferase 2 (secretor status included)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Fut2  fucosyltransferase 2 (secretor status included)    fucosyltransferase 2  Name updated 1299863 APPROVED
2001-04-06 Fut2  Fucosyltransferase 2      Symbol and name changed to reflect Human and Mouse nomenclature 61478 APPROVED
2001-04-04 Futb  Alpha1,2-fucosyltransferase b      Symbol inconsistent with Human and Mouse 61478 WITHDRAWN