Rbms3 (RNA binding motif, single stranded interacting protein 3) - Rat Genome Database

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Gene: Rbms3 (RNA binding motif, single stranded interacting protein 3) Rattus norvegicus
Analyze
Symbol: Rbms3
Name: RNA binding motif, single stranded interacting protein 3
RGD ID: 1588240
Description: Predicted to enable mRNA 3'-UTR AU-rich region binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Predicted to be involved in defense response to tumor cell; negative regulation of canonical Wnt signaling pathway; and regulation of gene expression. Predicted to act upstream of or within positive regulation of translation. Predicted to be located in cytoplasm. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytosol and nucleus. Orthologous to human RBMS3 (RNA binding motif single stranded interacting protein 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC680726; RNA-binding motif, single-stranded-interacting protein 3; similar to RNA binding motif, single stranded interacting protein 3 isoform 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88125,183,311 - 125,970,239 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8125,183,315 - 126,503,586 (-)EnsemblGRCr8
mRatBN7.28116,305,227 - 117,625,730 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8116,309,882 - 117,625,423 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8121,902,435 - 122,590,669 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08120,101,338 - 120,789,571 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08117,944,212 - 118,625,632 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd8126,055,377 - 126,736,721 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive8128,159,287 - 128,840,658 (-)NCBILyon_Normotensive
Lyon_Hypertensive8126,645,237 - 127,326,586 (-)NCBILyon_Hypertensive
F344_StmMcwi8118,053,124 - 118,734,422 (-)NCBIF344_StmMcwi
Rnor_6.08124,833,804 - 125,645,895 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8124,661,839 - 125,645,898 (-)Ensemblrn6Rnor6.0
Rnor_5.08124,098,342 - 125,493,242 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48121,107,780 - 121,821,324 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8115,563,571 - 116,289,351 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-butoxyethanol  (ISO)
2-methylcholine  (ISO)
3',5'-cyclic UMP  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
8-Br-cAMP  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
auranofin  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
choline  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
folic acid  (ISO)
fulvestrant  (ISO)
geldanamycin  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
L-methionine  (ISO)
mercury dibromide  (ISO)
N,N-diethyl-m-toluamide  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,ISO)
cytosol  (IBA)
nucleus  (IBA)
ribonucleoprotein complex  (IBA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10675610   PMID:22372950   PMID:28409548  


Genomics

Comparative Map Data
Rbms3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88125,183,311 - 125,970,239 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8125,183,315 - 126,503,586 (-)EnsemblGRCr8
mRatBN7.28116,305,227 - 117,625,730 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8116,309,882 - 117,625,423 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8121,902,435 - 122,590,669 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08120,101,338 - 120,789,571 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08117,944,212 - 118,625,632 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd8126,055,377 - 126,736,721 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive8128,159,287 - 128,840,658 (-)NCBILyon_Normotensive
Lyon_Hypertensive8126,645,237 - 127,326,586 (-)NCBILyon_Hypertensive
F344_StmMcwi8118,053,124 - 118,734,422 (-)NCBIF344_StmMcwi
Rnor_6.08124,833,804 - 125,645,895 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8124,661,839 - 125,645,898 (-)Ensemblrn6Rnor6.0
Rnor_5.08124,098,342 - 125,493,242 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48121,107,780 - 121,821,324 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8115,563,571 - 116,289,351 (-)NCBICelera
Cytogenetic Map8q32NCBI
RBMS3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38329,281,071 - 30,010,395 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl328,574,791 - 30,010,391 (+)Ensemblhg38GRCh38
GRCh37329,322,562 - 30,051,886 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36329,297,947 - 30,021,624 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34329,297,946 - 30,007,813NCBI
Celera329,259,697 - 29,988,619 (+)NCBICelera
Cytogenetic Map3p24.1NCBI
HuRef329,264,107 - 29,994,199 (+)NCBIHuRef
CHM1_1329,272,966 - 30,002,039 (+)NCBICHM1_1
T2T-CHM13v2.0329,283,417 - 30,012,800 (+)NCBIT2T-CHM13v2.0
Rbms3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399116,401,814 - 117,869,900 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9116,401,814 - 117,701,749 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm389116,572,746 - 117,629,913 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9116,572,746 - 117,872,681 (-)Ensemblmm10GRCm38
GRCm38.p6 Ensembl9116,572,746 - 117,872,584 (-)Ensemblmm10GRCm38
MGSCv379116,481,864 - 117,539,031 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369116,426,294 - 117,100,841 (-)NCBIMGSCv36mm8
Celera9117,033,624 - 118,099,798 (-)NCBICelera
Cytogenetic Map9F3NCBI
cM Map968.78NCBI
Rbms3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543020,320,085 - 21,387,681 (+)Ensembl
ChiLan1.0NW_00495543020,714,647 - 21,394,049 (+)NCBIChiLan1.0ChiLan1.0
RBMS3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2228,514,820 - 29,991,252 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1328,519,612 - 29,996,022 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0328,460,921 - 29,931,862 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1329,493,909 - 30,251,572 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl329,494,280 - 30,245,021 (+)EnsemblpanPan2panpan1.1
RBMS3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12314,448,399 - 15,733,941 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2314,454,759 - 15,136,654 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2314,430,609 - 15,340,175 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02314,745,022 - 16,028,644 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2314,750,548 - 16,028,550 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12314,540,682 - 15,853,776 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02314,687,592 - 15,599,058 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02314,705,782 - 16,034,112 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rbms3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118186,376,394 - 187,690,709 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647319,764,760 - 20,822,818 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647320,169,383 - 20,828,355 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RBMS3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1314,970,324 - 16,462,743 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11314,968,921 - 16,458,470 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21316,934,391 - 17,687,893 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RBMS3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11573,084,392 - 74,535,601 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604146,279,677 - 47,808,341 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rbms3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247886,711,857 - 7,841,182 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247887,035,449 - 7,847,614 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Rbms3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v18107,870,509 - 108,535,612 (-)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:44
Interacting mature miRNAs:49
Transcripts:ENSRNOT00000036642, ENSRNOT00000036672, ENSRNOT00000039904, ENSRNOT00000041548
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
1599689Iddm24Insulin dependent diabetes mellitus QTL 244.720.001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)8122879213126360737Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat

Markers in Region
D8Mit11  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28116,824,149 - 116,824,306 (+)MAPPERmRatBN7.2
Rnor_6.08125,366,471 - 125,366,627NCBIRnor6.0
Rnor_5.08124,622,009 - 124,622,165UniSTSRnor5.0
RGSC_v3.48121,654,633 - 121,654,790RGDRGSC3.4
RGSC_v3.48121,654,634 - 121,654,790UniSTSRGSC3.4
Celera8116,023,953 - 116,024,109UniSTS
RGSC_v3.18121,674,318 - 121,674,702RGD
RH 3.4 Map81298.7RGD
RH 3.4 Map81298.7UniSTS
RH 2.0 Map81002.8RGD
SHRSP x BN Map883.48RGD
Cytogenetic Map8q32UniSTS
D8Rat117  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr88125,753,165 - 125,753,323 (+)Marker Load Pipeline
mRatBN7.28116,875,123 - 116,875,281 (+)MAPPERmRatBN7.2
Rnor_6.08125,428,671 - 125,428,828NCBIRnor6.0
Rnor_5.08124,682,254 - 124,682,411UniSTSRnor5.0
RGSC_v3.48121,705,265 - 121,705,423RGDRGSC3.4
RGSC_v3.48121,705,266 - 121,705,423UniSTSRGSC3.4
Celera8116,075,226 - 116,075,393UniSTS
RGSC_v3.18121,725,003 - 121,725,160RGD
RH 3.4 Map81296.3UniSTS
RH 3.4 Map81296.3RGD
RH 2.0 Map8999.4RGD
SHRSP x BN Map881.9299RGD
Cytogenetic Map8q32UniSTS
D8Rat199  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.08125,045,607 - 125,045,844NCBIRnor6.0
Rnor_5.08124,312,772 - 124,313,009UniSTSRnor5.0
RGSC_v3.48121,318,263 - 121,318,500UniSTSRGSC3.4
RGSC_v3.48121,318,262 - 121,318,501RGDRGSC3.4
Celera8115,714,712 - 115,714,939UniSTS
RGSC_v3.18121,337,999 - 121,338,238RGD
RH 3.4 Map81222.6RGD
RH 3.4 Map81222.6UniSTS
RH 2.0 Map8987.4RGD
SHRSP x BN Map883.31RGD
Cytogenetic Map8q32UniSTS
D8Got188  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.08125,333,447 - 125,333,639NCBIRnor6.0
RGSC_v3.48121,619,817 - 121,619,994UniSTSRGSC3.4
RGSC_v3.48121,619,816 - 121,619,994RGDRGSC3.4
Celera8115,993,440 - 115,993,615UniSTS
RGSC_v3.18121,639,554 - 121,639,731RGD
RH 3.4 Map81297.0RGD
RH 3.4 Map81297.0UniSTS
RH 2.0 Map81000.9RGD
Cytogenetic Map8q32UniSTS
D8Sunn9  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28116,735,896 - 116,736,098 (+)MAPPERmRatBN7.2
Rnor_6.08125,275,655 - 125,275,856NCBIRnor6.0
Rnor_5.08124,536,415 - 124,536,616UniSTSRnor5.0
RGSC_v3.48121,565,353 - 121,565,554UniSTSRGSC3.4
Celera8115,937,073 - 115,937,274UniSTS
Cytogenetic Map8q32UniSTS
BF404019  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr88125,331,809 - 125,331,982 (+)Marker Load Pipeline
mRatBN7.28116,453,718 - 116,453,891 (+)MAPPERmRatBN7.2
Rnor_6.08124,978,513 - 124,978,685NCBIRnor6.0
Rnor_5.08124,245,764 - 124,245,936UniSTSRnor5.0
RGSC_v3.48121,263,363 - 121,263,535UniSTSRGSC3.4
Celera8115,658,456 - 115,658,628UniSTS
RH 3.4 Map81315.9UniSTS
Cytogenetic Map8q32UniSTS
AW531036  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28116,684,582 - 116,684,734 (+)MAPPERmRatBN7.2
Rnor_6.08125,223,956 - 125,224,107NCBIRnor6.0
Rnor_5.08124,485,481 - 124,485,632UniSTSRnor5.0
Celera8115,885,293 - 115,885,444UniSTS
RH 3.4 Map81296.3UniSTS
Cytogenetic Map8q32UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
10 16 12 150 249 91 90 65 52 59 22 398 244 11 228 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001401889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001061329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006244039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000036642   ⟹   ENSRNOP00000037094
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8116,314,713 - 116,842,222 (-)Ensembl
Rnor_6.0 Ensembl8124,840,160 - 125,544,427 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000036672   ⟹   ENSRNOP00000029127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 126,260,199 (-)Ensembl
mRatBN7.2 Ensembl8116,309,882 - 117,382,220 (-)Ensembl
Rnor_6.0 Ensembl8124,840,160 - 125,645,898 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000039904   ⟹   ENSRNOP00000041726
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,734,217 (-)Ensembl
mRatBN7.2 Ensembl8116,314,713 - 116,842,222 (-)Ensembl
Rnor_6.0 Ensembl8124,840,160 - 125,544,427 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000041548   ⟹   ENSRNOP00000039967
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,868,962 (-)Ensembl
mRatBN7.2 Ensembl8116,311,266 - 116,990,424 (-)Ensembl
Rnor_6.0 Ensembl8124,661,839 - 125,544,427 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000094447   ⟹   ENSRNOP00000077991
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,868,962 (-)Ensembl
mRatBN7.2 Ensembl8116,310,261 - 116,990,421 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000095366   ⟹   ENSRNOP00000079325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,819,752 (-)Ensembl
mRatBN7.2 Ensembl8116,309,882 - 116,941,631 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098379   ⟹   ENSRNOP00000085414
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,868,962 (-)Ensembl
mRatBN7.2 Ensembl8116,309,882 - 116,990,424 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117887   ⟹   ENSRNOP00000094964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 126,503,586 (-)Ensembl
mRatBN7.2 Ensembl8116,309,882 - 117,625,423 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000137037   ⟹   ENSRNOP00000109537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,868,962 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000156456   ⟹   ENSRNOP00000103863
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8125,183,315 - 125,868,962 (-)Ensembl
RefSeq Acc Id: NM_001401889   ⟹   NP_001388818
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,315 - 125,868,962 (-)NCBI
mRatBN7.28116,305,227 - 116,990,934 (-)NCBI
Dahl_SR_JrHsd8126,055,377 - 126,736,721 (-)NCBI
Lyon_Normotensive8128,159,287 - 128,840,658 (-)NCBI
Lyon_Hypertensive8126,645,237 - 127,326,586 (-)NCBI
F344_StmMcwi8118,053,124 - 118,734,422 (-)NCBI
RefSeq Acc Id: XM_001061329   ⟹   XP_001061329
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,827 (-)NCBI
mRatBN7.28116,308,360 - 116,991,274 (-)NCBI
Rnor_6.08124,833,804 - 125,544,622 (-)NCBI
Rnor_5.08124,098,342 - 125,493,242 (-)NCBI
RGSC_v3.48121,107,780 - 121,821,324 (-)RGD
Sequence:
RefSeq Acc Id: XM_006244039   ⟹   XP_006244101
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,192,801 - 125,872,835 (-)NCBI
mRatBN7.28116,314,713 - 116,991,274 (-)NCBI
Rnor_6.08124,840,157 - 125,544,622 (-)NCBI
Rnor_5.08124,098,342 - 125,493,242 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596199   ⟹   XP_017451688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,970,239 (-)NCBI
mRatBN7.28116,308,360 - 117,625,725 (-)NCBI
Rnor_6.08124,833,804 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596200   ⟹   XP_017451689
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,192,801 - 125,970,239 (-)NCBI
mRatBN7.28116,314,713 - 117,625,729 (-)NCBI
Rnor_6.08124,840,157 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596201   ⟹   XP_017451690
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,970,239 (-)NCBI
mRatBN7.28116,308,360 - 117,625,729 (-)NCBI
Rnor_6.08124,833,804 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596202   ⟹   XP_017451691
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,970,239 (-)NCBI
mRatBN7.28116,308,360 - 117,625,726 (-)NCBI
Rnor_6.08124,833,804 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596203   ⟹   XP_017451692
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,970,239 (-)NCBI
mRatBN7.28116,308,360 - 117,625,727 (-)NCBI
Rnor_6.08124,833,804 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596206   ⟹   XP_017451695
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,192,801 - 125,970,239 (-)NCBI
mRatBN7.28116,314,713 - 117,625,730 (-)NCBI
Rnor_6.08124,840,157 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596207   ⟹   XP_017451696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,823,591 (-)NCBI
mRatBN7.28116,308,360 - 116,945,577 (-)NCBI
Rnor_6.08124,833,804 - 125,497,198 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596208   ⟹   XP_017451697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,970,239 (-)NCBI
mRatBN7.28116,308,360 - 117,625,727 (-)NCBI
Rnor_6.08124,833,804 - 125,645,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039082840   ⟹   XP_038938768
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,970,239 (-)NCBI
mRatBN7.28116,308,360 - 117,625,730 (-)NCBI
RefSeq Acc Id: XM_039082842   ⟹   XP_038938770
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,829 (-)NCBI
mRatBN7.28116,308,360 - 116,991,274 (-)NCBI
RefSeq Acc Id: XM_039082844   ⟹   XP_038938772
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,823,590 (-)NCBI
mRatBN7.28116,308,360 - 116,945,577 (-)NCBI
RefSeq Acc Id: XM_039082845   ⟹   XP_038938773
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,722,668 (-)NCBI
mRatBN7.28116,308,360 - 116,844,924 (-)NCBI
RefSeq Acc Id: XM_039082846   ⟹   XP_038938774
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,585,572 (-)NCBI
mRatBN7.28116,308,360 - 116,707,547 (-)NCBI
RefSeq Acc Id: XM_039082847   ⟹   XP_038938775
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,520,771 (-)NCBI
mRatBN7.28116,308,360 - 116,642,708 (-)NCBI
RefSeq Acc Id: XM_063266122   ⟹   XP_063122192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,835 (-)NCBI
RefSeq Acc Id: XM_063266123   ⟹   XP_063122193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,737,594 (-)NCBI
RefSeq Acc Id: XM_063266124   ⟹   XP_063122194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,835 (-)NCBI
RefSeq Acc Id: XM_063266125   ⟹   XP_063122195
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,838 (-)NCBI
RefSeq Acc Id: XM_063266126   ⟹   XP_063122196
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,830 (-)NCBI
RefSeq Acc Id: XM_063266127   ⟹   XP_063122197
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,823,592 (-)NCBI
RefSeq Acc Id: XM_063266128   ⟹   XP_063122198
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,872,839 (-)NCBI
RefSeq Acc Id: XM_063266129   ⟹   XP_063122199
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88125,183,311 - 125,520,771 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001388818 (Get FASTA)   NCBI Sequence Viewer  
  XP_001061329 (Get FASTA)   NCBI Sequence Viewer  
  XP_006244101 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451688 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451689 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451690 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451691 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451692 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451695 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451696 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451697 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938768 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938770 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938773 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938774 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938775 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122192 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122193 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122194 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122195 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122196 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122197 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122198 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122199 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000029127
  ENSRNOP00000029127.7
  ENSRNOP00000039967
  ENSRNOP00000039967.7
  ENSRNOP00000041726
  ENSRNOP00000041726.7
  ENSRNOP00000077991
  ENSRNOP00000077991.1
  ENSRNOP00000079325
  ENSRNOP00000079325.1
  ENSRNOP00000085414
  ENSRNOP00000085414.2
  ENSRNOP00000094964
  ENSRNOP00000094964.2
  ENSRNOP00000103863.1
  ENSRNOP00000109537.1
RefSeq Acc Id: XP_001061329   ⟸   XM_001061329
- Peptide Label: isoform X9
- UniProtKB: A0A8I5ZJM8 (UniProtKB/TrEMBL),   A6I3S9 (UniProtKB/TrEMBL),   A6I3T0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244101   ⟸   XM_006244039
- Peptide Label: isoform X13
- UniProtKB: A6I3S8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451697   ⟸   XM_017596208
- Peptide Label: isoform X10
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451692   ⟸   XM_017596203
- Peptide Label: isoform X5
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451691   ⟸   XM_017596202
- Peptide Label: isoform X4
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451690   ⟸   XM_017596201
- Peptide Label: isoform X3
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451688   ⟸   XM_017596199
- Peptide Label: isoform X1
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451696   ⟸   XM_017596207
- Peptide Label: isoform X12
- UniProtKB: A0A8I5ZMK2 (UniProtKB/TrEMBL),   A6I3T0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451695   ⟸   XM_017596206
- Peptide Label: isoform X6
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451689   ⟸   XM_017596200
- Peptide Label: isoform X2
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000029127   ⟸   ENSRNOT00000036672
Ensembl Acc Id: ENSRNOP00000037094   ⟸   ENSRNOT00000036642
Ensembl Acc Id: ENSRNOP00000039967   ⟸   ENSRNOT00000041548
Ensembl Acc Id: ENSRNOP00000041726   ⟸   ENSRNOT00000039904
RefSeq Acc Id: XP_038938768   ⟸   XM_039082840
- Peptide Label: isoform X7
- UniProtKB: A6I3S7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938770   ⟸   XM_039082842
- Peptide Label: isoform X11
- UniProtKB: A6I3S8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938772   ⟸   XM_039082844
- Peptide Label: isoform X14
- UniProtKB: A6I3T0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938773   ⟸   XM_039082845
- Peptide Label: isoform X18
- UniProtKB: A6I3T0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938774   ⟸   XM_039082846
- Peptide Label: isoform X21
RefSeq Acc Id: XP_038938775   ⟸   XM_039082847
- Peptide Label: isoform X22
Ensembl Acc Id: ENSRNOP00000079325   ⟸   ENSRNOT00000095366
Ensembl Acc Id: ENSRNOP00000094964   ⟸   ENSRNOT00000117887
Ensembl Acc Id: ENSRNOP00000085414   ⟸   ENSRNOT00000098379
Ensembl Acc Id: ENSRNOP00000077991   ⟸   ENSRNOT00000094447
RefSeq Acc Id: NP_001388818   ⟸   NM_001401889
- UniProtKB: A0A8I6GDD6 (UniProtKB/TrEMBL),   A6I3T0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122198   ⟸   XM_063266128
- Peptide Label: isoform X20
- UniProtKB: A6I3S8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122195   ⟸   XM_063266125
- Peptide Label: isoform X16
- UniProtKB: A6I3S8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122194   ⟸   XM_063266124
- Peptide Label: isoform X15
- UniProtKB: A6I3S9 (UniProtKB/TrEMBL),   A6I3T0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122192   ⟸   XM_063266122
- Peptide Label: isoform X8
- UniProtKB: A6I3T0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122196   ⟸   XM_063266126
- Peptide Label: isoform X17
- UniProtKB: A6I3S8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122197   ⟸   XM_063266127
- Peptide Label: isoform X19
- UniProtKB: A6I3S8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122193   ⟸   XM_063266123
- Peptide Label: isoform X14
- UniProtKB: A6I3T0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122199   ⟸   XM_063266129
- Peptide Label: isoform X22
Ensembl Acc Id: ENSRNOP00000109537   ⟸   ENSRNOT00000137037
Ensembl Acc Id: ENSRNOP00000103863   ⟸   ENSRNOT00000156456
Protein Domains
RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LVI3-F1-model_v2 AlphaFold F1LVI3 1-444 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1588240 AgrOrtholog
BioCyc Gene G2FUF-28849 BioCyc
Ensembl Genes ENSRNOG00000025881 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000036672 ENTREZGENE
  ENSRNOT00000036672.8 UniProtKB/TrEMBL
  ENSRNOT00000039904 ENTREZGENE
  ENSRNOT00000039904.8 UniProtKB/TrEMBL
  ENSRNOT00000041548 ENTREZGENE
  ENSRNOT00000041548.8 UniProtKB/TrEMBL
  ENSRNOT00000094447 ENTREZGENE
  ENSRNOT00000094447.2 UniProtKB/TrEMBL
  ENSRNOT00000095366 ENTREZGENE
  ENSRNOT00000095366.2 UniProtKB/TrEMBL
  ENSRNOT00000098379 ENTREZGENE
  ENSRNOT00000098379.2 UniProtKB/TrEMBL
  ENSRNOT00000117887 ENTREZGENE
  ENSRNOT00000117887.2 UniProtKB/TrEMBL
  ENSRNOT00000137037.1 UniProtKB/TrEMBL
  ENSRNOT00000156456.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro Hud_Sxl_RNA UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RBMS3_RRM2 UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
NCBI Gene 680726 ENTREZGENE
PANTHER RNA BINDING PROTEIN UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/TrEMBL
PhenoGen Rbms3 PhenoGen
PRINTS HUDSXLRNA UniProtKB/TrEMBL
PROSITE RRM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000025881 RatGTEx
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A8I5ZJM8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZMK2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GDD6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GKY7_RAT UniProtKB/TrEMBL
  A0ABK0LRJ0_RAT UniProtKB/TrEMBL
  A0ABK0M430_RAT UniProtKB/TrEMBL
  A6I3S7 ENTREZGENE, UniProtKB/TrEMBL
  A6I3S8 ENTREZGENE, UniProtKB/TrEMBL
  A6I3S9 ENTREZGENE, UniProtKB/TrEMBL
  A6I3T0 ENTREZGENE, UniProtKB/TrEMBL
  F1LU19_RAT UniProtKB/TrEMBL
  F1LVI3_RAT UniProtKB/TrEMBL
  F1LYR6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-21 Rbms3  RNA binding motif, single stranded interacting protein 3  LOC680726  similar to RNA binding motif, single stranded interacting protein 3 isoform 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC680726  similar to RNA binding motif, single stranded interacting protein 3 isoform 1      Symbol and Name status set to provisional 70820 PROVISIONAL