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Gene: Peli2 (pellino E3 ubiquitin protein ligase family member 2) Rattus norvegicus

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Symbol:

Peli2

Name:

pellino E3 ubiquitin protein ligase family member 2

RGD ID:

1565884

Description:

Predicted to enable protein-macromolecule adaptor activity and ubiquitin protein ligase activity. Predicted to be involved in protein polyubiquitination. Predicted to act upstream of or within positive regulation of MAPK cascade. Predicted to be located in cytosol and membrane. Orthologous to human PELI2 (pellino E3 ubiquitin protein ligase family member 2); PARTICIPATES IN interleukin-1 signaling pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

E3 ubiquitin-protein ligase pellino homolog 2; LOC305835; pellino 2; pellino homolog 2; pellino homolog 2 (Drosophila); RGD1565884; similar to Pellino protein homolog 2 (Pellino 2)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	23,872,984 - 24,017,448 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	23,872,984 - 24,014,817 (+)	Ensembl				GRCr8
mRatBN7.2	15	21,393,262 - 21,537,737 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	21,393,262 - 21,535,106 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	24,173,903 - 24,315,895 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	25,131,901 - 25,274,059 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	23,382,352 - 23,524,344 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	24,942,218 - 25,086,350 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	24,942,218 - 25,083,931 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	28,874,964 - 29,015,968 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	24,227,734 - 24,371,242 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	21,777,356 - 21,917,575 (+)	NCBI		Celera
Cytogenetic Map	15	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

basal cell carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,4-methylenedioxymethamphetamine (ISO)

3,7-dihydropurine-6-thione (EXP)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

astemizole (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cisplatin (ISO)

clofibrate (ISO)

clothianidin (ISO)

cyclosporin A (ISO)

diazinon (ISO)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

folic acid (ISO)

genistein (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

hydrogen cyanide (ISO)

lead diacetate (ISO)

mercaptopurine (EXP)

Monobutylphthalate (EXP,ISO)

nickel atom (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

potassium cyanide (ISO)

propiconazole (ISO)

purine-6-thiol (EXP)

resveratrol (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

temozolomide (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

positive regulation of MAPK cascade (ISO)

positive regulation of protein phosphorylation (ISO)

protein polyubiquitination (IBA,IEA)

protein ubiquitination (IEA)

regulation of Toll signaling pathway (IEA)

Cellular Component

cytosol (ISO)

membrane (ISO)

Molecular Function

protein binding (ISO)

protein-macromolecule adaptor activity (ISO)

transferase activity (IEA)

ubiquitin protein ligase activity (IBA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

interleukin-1 signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Comprehensive gene review and curation	RGD comprehensive gene curation
4.	Interleukin-1 (IL-1) pathway.	Weber A, etal., Sci Signal. 2010 Jan 19;3(105):cm1. doi: 10.1126/scisignal.3105cm1.

Additional References at PubMed

PMID:12804775	PMID:16831874

Genomics

Comparative Map Data

Peli2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	23,872,984 - 24,017,448 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	23,872,984 - 24,014,817 (+)	Ensembl				GRCr8
mRatBN7.2	15	21,393,262 - 21,537,737 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	21,393,262 - 21,535,106 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	24,173,903 - 24,315,895 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	25,131,901 - 25,274,059 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	23,382,352 - 23,524,344 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	24,942,218 - 25,086,350 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	24,942,218 - 25,083,931 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	28,874,964 - 29,015,968 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	24,227,734 - 24,371,242 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	21,777,356 - 21,917,575 (+)	NCBI		Celera
Cytogenetic Map	15	p14	NCBI

PELI2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	56,118,411 - 56,301,524 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	56,117,814 - 56,301,524 (+)	Ensembl			hg38	GRCh38
GRCh37	14	56,585,129 - 56,768,242 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	55,654,846 - 55,837,784 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	55,654,955 - 55,837,773	NCBI
Celera	14	36,634,745 - 36,817,661 (+)	NCBI		Celera
Cytogenetic Map	14	q22.3	NCBI
HuRef	14	36,750,325 - 36,932,809 (+)	NCBI		HuRef
CHM1_1	14	56,523,869 - 56,706,776 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	50,324,186 - 50,507,449 (+)	NCBI		T2T-CHM13v2.0

Peli2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	48,358,096 - 48,519,035 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	48,358,280 - 48,519,032 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	48,120,777 - 48,281,578 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	48,120,823 - 48,281,575 (+)	Ensembl			mm10	GRCm38
MGSCv37	14	48,740,544 - 48,880,558 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	47,042,891 - 47,178,775 (+)	NCBI		MGSCv36	mm8
Celera	14	44,316,653 - 44,456,842 (+)	NCBI		Celera
Cytogenetic Map	14	C1	NCBI
cM Map	14	24.6	NCBI

Peli2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	10,227,112 - 10,335,515 (+)	Ensembl
ChiLan1.0	NW_004955466	10,228,101 - 10,335,129 (+)	NCBI	ChiLan1.0	ChiLan1.0

PELI2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	57,234,878 - 57,417,897 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	56,451,392 - 56,634,412 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	36,700,217 - 36,883,224 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	54,971,311 - 55,154,435 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	55,031,362 - 55,150,067 (+)	Ensembl			panPan2	panpan1.1

PELI2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	31,834,287 - 32,013,387 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	31,833,909 - 32,012,092 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	31,602,071 - 31,782,087 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	32,088,573 - 32,266,054 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	32,088,152 - 32,265,946 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	31,689,504 - 31,869,587 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	31,767,532 - 31,944,848 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	32,140,269 - 32,317,670 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Peli2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	73,180,190 - 73,311,503 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	875,645 - 1,012,081 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	895,903 - 1,011,486 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PELI2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	185,397,812 - 185,599,780 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	185,397,807 - 185,604,160 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	206,187,017 - 206,220,942 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PELI2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	33,319,212 - 33,669,878 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	33,319,402 - 33,505,705 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	21,536,460 - 21,732,032 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Peli2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624884	1,101,550 - 1,282,444 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624884	1,101,636 - 1,286,610 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Peli2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	74,782,406 - 74,915,983 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Peli2
938 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	915
Count of miRNA genes:	314
Interacting mature miRNAs:	429
Transcripts:	ENSRNOT00000016629
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1641913	Colcr2	Colorectal carcinoma resistance QTL 2	6.57	0.0197	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	15	2315759	47315759	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	15	19155762	87086765	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	2785923	47785923	Rat
5684946	Bss98	Bone structure and strength QTL 98	3.9	0.0026	tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	15	1	39411584	Rat
1354657	Despr13	Despair related QTL 13		0.0022	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	15	1	32342855	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	14926594	71614418	Rat
1641887	Alcrsp14	Alcohol response QTL 14			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	15	1	44836456	Rat
631550	Bw7	Body weight QTL 7	3.6		body mass (VT:0001259)	body weight (CMO:0000012)	15	22336351	67336351	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2315759	53331089	Rat
10755503	Bp391	Blood pressure QTL 391	2.37		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	15	22728353	42072050	Rat
5685002	Bss103	Bone structure and strength QTL 103	2.8		tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	15	16911521	32439851	Rat
2324620	Coatc3	Coat color QTL 3			coat/hair pigmentation trait (VT:0010463)	pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)	15	22336351	52597086	Rat

Markers in Region

BF406292

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	21,533,232 - 21,533,425 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	25,082,058 - 25,082,250	NCBI	Rnor6.0
Rnor_5.0	15	29,013,776 - 29,013,968	UniSTS	Rnor5.0
RGSC_v3.4	15	24,369,050 - 24,369,242	UniSTS	RGSC3.4
Celera	15	21,915,404 - 21,915,596	UniSTS
RH 3.4 Map	15	125.43	UniSTS
Cytogenetic Map	15	p14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	85	59	6	349	185	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016629 ⟹ ENSRNOP00000016629

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	23,872,984 - 24,014,817 (+)	Ensembl
mRatBN7.2 Ensembl	15	21,393,262 - 21,535,106 (+)	Ensembl
Rnor_6.0 Ensembl	15	24,942,218 - 25,083,931 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097636 ⟹ ENSRNOP00000078130

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	23,873,772 - 24,014,817 (+)	Ensembl
mRatBN7.2 Ensembl	15	21,442,162 - 21,535,106 (+)	Ensembl

RefSeq Acc Id:

NM_001107259 ⟹ NP_001100729

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	23,872,984 - 24,015,136 (+)	NCBI
mRatBN7.2	15	21,393,262 - 21,535,425 (+)	NCBI
Rnor_6.0	15	24,942,218 - 25,084,250 (+)	NCBI
Rnor_5.0	15	28,874,964 - 29,015,968 (+)	NCBI
RGSC_v3.4	15	24,227,734 - 24,371,242 (+)	RGD
Celera	15	21,777,356 - 21,917,575 (+)	RGD

Sequence:

show sequence

GGCTCCGGTCGCCGCTCGCATTCCTAGTCCGGTCCCGCTCGCAGCGGCGGAAGAGCGTGTAGCT
CCGGGGAAGCCGGCGGGCGACGCTCGCAGCCACGACGGAGCAGCCGCGGGACTGGCCGCCCCGC
GCCCCGTTCGCCGCCGTGCCGTTTCCCGGCGCGCTCACCCCGTTCTCGGGATGGGAGTGTAGCG
GCGGCGCGGACTCGGCGGGGATCGCGGCGGAGGCGGCTGCGGCGGCGGCCGAGCACGGCTCCAT
GTTTTCACCCGGCCAGGAGGAACCCAGCTCCCCCAACAAGGAGCCGGTGAAATACGGGGAGCTG
GTGGTCCTGGGGTACAATGGTGCTTTACCTAATGGTGACAGGGGCAGGAGGAAAAGCAGATTTG
CCCTGTATAAGCGGACCAAGGCCAACGGTGTCAAACCCAGCACAATCCACGTGGTCTCCACACC
CCAGGCATCCAAGGCCATCAGCTGCAAAGGTCAACACAGCATATCGTACACTTTGTCACGGAAC
CAGACCGTAGTGGTGGAGTACACACATGATAATGACACGGACATGTTTCAGGTGGGCAGGTCAA
CAGAAAGTCCCATCGACTTCGTGGTCACAGACACGGTTTCCGGCGGTCAGAACGACGATGCCCA
GATCACACAGAGCACCATCTCTAGGTTTGCCTGCAGGATCGTGTGCGACAGGAACGAGCCATAC
ACAGCACGCATATTCGCAGCAGGGTTCGATTCTTCCAAAAATATATTCCTCGGCGAGAAGGCGG
CAAAGTGGAAAAACCCTGGCGGGCACATGGACGGACTCACCACCAACGGCGTCCTGGTAATGCA
CCCAAGAGGAGGCTTCACGGATGAGTCCCAGCCCGGAGTCTGGAGAGAGATCTCCGTCTGTGGA
GACGTGTACACCTTGAGGGAGACCAGGTCGGCCCAGCAGAGGGGGAAGCTGGTGGAAAGCGAGA
CCAATGTCCTGCAAGATGGCTCCCTCATTGACCTGTGCGGGGCCACGCTCCTCTGGAGAACCGC
CGACGGCCTCTTCCACGCACCGACTCAGAAGCACATTGAAGCCCTCCGGCAGGAGATCAACGCA
GCCCGACCCCAGTGTCCCGTGGGCCTCAACACCCTGGCCTTCCCCAGCATCAACCGGAAGGAAG
TGGTAGAAGAGAAGCAGCCCTGGGCGTACCTGAGCTGCGGTCACGTGCACGGCTACCACAGCTG
GGGCCATCGGAGCGACGGCGAAGCCAACGAGCGGGAGTGTCCCATGTGCAGGACTGTGGGCCCC
TATGTCCCCCTCTGGCTGGGCTGTGAGGCAGGGTTTTATGTCGATGCAGGACCTCCAACTCACG
CTTTCACCCCCTGTGGGCACGTCTGTTCGGAGAAGTCCGCAAAGTACTGGTCCCAGATTCCACT
GCCCCACGGAACCCACGCATTTCACGCCGCCTGTCCGTTCTGTGCCACGCAGCTGGTTGGTGAA
CAAAACTGCATCAAATTGATTTTCCAAGGTCCAGTGGACTGACACCCTGGACGACCGTCTACAT
GACGATAACACGTTACTGTGAAGATTTCGCCACTAACTGTAGATCCTACCTTTTTGTAAGGCTC
TTTGTTGAGGGGACGGCGGACTGAGTTGGGACGACAGAGGTGGGGCAGGCGATGACAGATACCA
CTGTGTTTGGCATGCCCAGAACAGCAGCCTCACCTGAGGTCTGCCTGACTAAACTTTAATACCT
GTGTAATGATTAGATTTCAACTGCCATGCTTTTATTTTTAACTTTAGGTTTTTAACCAGATTTT
TTTCCCCCTTTGTAAACTTGGGTAAGATTTTACAAATGTAGAAGAAGGGTACTCTGCAGATGTC
TCTTAGAGCACAGCCTGCAGAGCTGTGTGGCACAGGAGTCACACATCTGGTGATGTTCAGTGGT
TGGGAATACTTGACAGTGGCCAGAATCTGACCCAGTACCAAAGGGCCAGCTCTGTTGGCCCTGC
CACAAACACCCGTGGACAGGAGGCGTAGACCATGCACTTGTCTTGAACTCTGTAGCTTTTCCTC
ACTTTTTTTTTTTTTTTTTTTTTTTTACTTTGGGTGGAAGAGAGAATCCATATACTGTTTCATT
TTAACTTTAGTGGAATTCACTTACATATTCACTCATCAGATATGTGGCATGTCAAACAAAGAAC
CCCCCCCCATGGTCCTAGCCTGCCCTGTTATTAATTTTGCTTAGCGTGACACTTACATGTCAAG
AAGTGATTGGTTGGTTGGTTAACTGATTGATTGATGATTGAATTCATGAACTGAGGGTGGCAGC
AGCGGGCGTGTCCTAGGTACTCTAACATCAGTTTTATCTGCACACCAGAAAACTTAAGACCCAA
GTGGGATTTAAAATACGCTTTTACTTCTAAAACCACTTGCTGGCACGTCCTGTGTTTCCTTTCT
CTTCTTCTTAGGAAAGCCCAAGATTTTTTAAGCCCAGAAGCAACAAGCAACAGCGAGATTGTCA
TTTCTGTCCCCTACCTTCCCACCATCTGTCACCTTCCCTCACAGCTTAAGGAACCCCATAAGGT
TTTTGGTTTTGTTTTTTGTTTTTTGTTTTTTTTAATGTTTGCAAATCAAGCTAAATCTAAATGT
GATTGTCAGCTACACGGAGCACTGAGTGGCATGTGTGTAGAGATTGGTCGAGATTCCTGCTTTT
GAGAGGGCAAGTGAGTGTTTACTGGGGAATCATTAAATCAGTTTCATATGAGCTGCACTGCCCC
TCTCTGTTTCATCTTGCATTGATTGATAATGCCTGAGTGCTTGTTTTCTATGCTTGGTGACAGT
GGTATCAGAGGCTCCCAGAATGTCAGCATGGAGACACACTGCTGGGCTTAGCTGCATTCCACCC
CATTCCCAGGGAGAAAGTCTTCGGTTAAATTAACATCTGCTCAGAGGGACCGCCAACAGATCTG
ATCTGCCTGTTTTAGCTTTTGTAAATATAAATAATTTATATGATTATGACATATCCATACTTGA
ATCGGTTTTTCCATATCTTGCCTATTAGCAGATATTTCACCTATTTTCAACCAATTAAACCTAT
TTGAGTAGTTTTTCCTGAAGGCAAAACGGTAATATTAATTCCTCTGTAGTGTTGCTGCTTAGTT
CGACTCAATTTGCTGGAGTTACCTGTCATTTTAAAAATAGCTTTATTTTCCCTTGGAGACTGTT
AAGAATTATGAGAGAGTTTTTTGTTTTAATTATATTTATTAACGAGATAAAAGTTTACGTTATA
CCACTAAACTCTAGTCCGAAACTTACTACCTCAGCTGAGAATCGAGACAAGAGAGAAAGAGAGA
GAGAGAGAGAAAGAGAGAGAGAGAGAGAGAAGAGAACTTTCTAGAGAAACCTAGGGTGCCACCT
GGTGCAGCCAGCGTTTTTATCACTGGTTTTCCTCCCCACCCCACCCCACCCCGCCTCTAGTTAT
ATGGAAATTTATAGTTTGAGGGTTCCTGTCGTAATCTTGTAAGATAAAGGGTCTCACACCCAGT
AAGGTTAAATTTTATATTTCACCCATC

hide sequence

RefSeq Acc Id:

XM_017599664 ⟹ XP_017455153

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	23,873,351 - 24,017,448 (+)	NCBI
mRatBN7.2	15	21,393,613 - 21,537,737 (+)	NCBI
Rnor_6.0	15	24,942,555 - 25,086,350 (+)	NCBI

Sequence:

show sequence

TGAGGACGCGGGCGGCGGGGCGTCGCGGAGGGATGCGCTCCTGAGGGCCCGGGTCCCCGGGGCG
CTCGTTGCTGCGGCCCGGAGGGCGCTCCTGCACCGCGCGGGGTCGCTCGGTGCAGCCGGGAGCC
CGTGGCCGCTGGGGACTTCTCGTTCCTGAGGACCGCGAACGCGGAGCCCTGTCCCCGGAGCCCA
GAGCCCAGTCCGCGGGGGTTAAGCATTGTTCCAGTCTGTGACCCGGGCGGCCGGCTGGCCTCCG
CTTCTTTGGCGCCGGGAGTGAGATCGGCCAAGGGCCTGGACCTGGTCCTGGTTTTCCCGGGTCC
TCTCAACAACGTTTCCCGGATCCCCCGGGTGTCCATACCTCTTGGGTCTCCGTACCCCTTGATC
CCCTTACCCCTGGGGTCCCTGCACCCCTCGAGCCTCGGCCTTGCCGATGCCCCCGCCAGCGGCG
GGGAGCTCGCCACCCTGCCCGCCTTGGCTTCCACTCCGCTGGTAAAAATCACATTGTGAAGATA
GTAATTATCCACAATCGTTAAACGGCAGCAATTAAGAGACTTCATCTACTTCCCGAGTTTCCTT
GTGACATTTCTATTGTTTACCCTTAATAAACCCGGAGGGAGGCTTCGCAGGATTAAAGCAGGTT
AAAGTGGGCAATGAAAAGGGTGTGGGTGGGGGAGGCGGAAAGTGCAGGAAACTCGGCGCTGGAG
CAACTTGGGTTTAGTGCTGCAGGGGAAGGATTGTTTTCCCTTTGGATGTGCCGCTCTGGGGAAC
CCGCGCTTTTGTCCTCTGTTGAAAGATCTGTATTCAGACCCACACGGGTGCTGATGGGTGGACT
TAGAGACACGCGAGGAAGCGACCCCCCCTCCCCCACCAGCAGAGACTCAGGGAACTCTGAGAAA
CGTGTTTTGATTACTACCTCGAAGTACAATGGTGCTTTACCTAATGGTGACAGGGGCAGGAGGA
AAAGCAGATTTGCCCTGTATAAGCGGACCAAGGCCAACGGTGTCAAACCCAGCACAATCCACGT
GGTCTCCACACCCCAGGCATCCAAGGCCATCAGCTGCAAAGGTCAACACAGCATATCGTACACT
TTGTCACGGAACCAGACCGTAGTGGTGGAGTACACACATGATAATGACACGGACATGTTTCAGG
TGGGCAGGTCAACAGAAAGTCCCATCGACTTCGTGGTCACAGACACGGTTTCCGGCGGTCAGAA
CGACGATGCCCAGATCACACAGAGCACCATCTCTAGGTTTGCCTGCAGGATCGTGTGCGACAGG
AACGAGCCATACACAGCACGCATATTCGCAGCAGGGTTCGATTCTTCCAAAAATATATTCCTCG
GCGAGAAGGCGGCAAAGTGGAAAAACCCTGGCGGGCACATGGACGGACTCACCACCAACGGCGT
CCTGGTAATGCACCCAAGAGGAGGCTTCACGGATGAGTCCCAGCCCGGAGTCTGGAGAGAGATC
TCCGTCTGTGGAGACGTGTACACCTTGAGGGAGACCAGGTCGGCCCAGCAGAGGGGGAAGCTGG
TGGAAAGCGAGACCAATGTCCTGCAAGATGGCTCCCTCATTGACCTGTGCGGGGCCACGCTCCT
CTGGAGAACCGCCGACGGCCTCTTCCACGCACCGACTCAGAAGCACATTGAAGCCCTCCGGCAG
GAGATCAACGCAGCCCGACCCCAGTGTCCCGTGGGCCTCAACACCCTGGCCTTCCCCAGCATCA
ACCGGAAGGAAGTGGTAGAAGAGAAGCAGCCCTGGGCGTACCTGAGCTGCGGTCACGTGCACGG
CTACCACAGCTGGGGCCATCGGAGCGACGGCGAAGCCAACGAGCGGGAGTGTCCCATGTGCAGG
ACTGTGGGCCCCTATGTCCCCCTCTGGCTGGGCTGTGAGGCAGGGTTTTATGTCGATGCAGGAC
CTCCAACTCACGCTTTCACCCCCTGTGGGCACGTCTGTTCGGAGAAGTCCGCAAAGTACTGGTC
CCAGATTCCACTGCCCCACGGAACCCACGCATTTCACGCCGCCTGTCCGTTCTGTGCCACGCAG
CTGGTTGGTGAACAAAACTGCATCAAATTGATTTTCCAAGGTCCAGTGGACTGACACCCTGGAC
GACCGTCTACATGACGATAACACGTTACTGTGAAGATTTCGCCACTAACTGTAGATCCTACCTT
TTTGTAAGGCTCTTTGTTGAGGGGACGGCGGACTGAGTTGGGACGACAGAGGTGGGGCAGGCGA
TGACAGATACCACTGTGTTTGGCATGCCCAGAACAGCAGCCTCACCTGAGGTCTGCCTGACTAA
ACTTTAATACCTGTGTAATGATTAGATTTCAACTGCCATGCTTTTATTTTTAACTTTAGGTTTT
TAACCAGATTTTTTTCCCCCTTTGTAAACTTGGGTAAGATTTTACAAATGTAGAAGAAGGGTAC
TCTGCAGATGTCTCTTAGAGCACAGCCTGCAGAGCTGTGTGGCACAGGAGTCACACATCTGGTG
ATGTTCAGTGGTTGGGAATACTTGACAGTGGCCAGAATCTGACCCAGTACCAAAGGGCCAGCTC
TGTTGGCCCTGCCACAAACACCCGTGGACAGGAGGCGTAGACCATGCACTTGTCTTGAACTCTG
TAGCTTTTCCTCACTTTTTTTTTTTTTTTTTTTTTTTTACTTTGGGTGGAAGAGAGAATCCATA
TACTGTTTCATTTTAACTTTAGTGGAATTCACTTACATATTCACTCATCAGATATGTGGCATGT
CAAACAAAGAACCCCCCCCCATGGTCCTAGCCTGCCCTGTTATTAATTTTGCTTAGCGTGACAC
TTACATGTCAAGAAGTGATTGGTTGGTTGGTTAACTGATTGATTGATGATTGAATTCATGAACT
GAGGGTGGCAGCAGCGGGCGTGTCCTAGGTACTCTAACATCAGTTTTATCTGCACACCAGAAAA
CTTAAGACCCAAGTGGGATTTAAAATACGCTTTTACTTCTAAAACCACTTGCTGGCACGTCCTG
TGTTTCCTTTCTCTTCTTCTTAGGAAAGCCCAAGATTTTTTAAGCCCAGAAGCAACAAGCAACA
GCGAGATTGTCATTTCTGTCCCCTACCTTCCCACCATCTGTCACCTTCCCTCACAGCTTAAGGA
ACCCCATAAGGTTTTTGGTTTTGTTTTTTGTTTTTTGTTTTTTTTAATGTTTGCAAATCAAGCT
AAATCTAAATGTGATTGTCAGCTACACGGAGCACTGAGTGGCATGTGTGTAGAGATTGGTCGAG
ATTCCTGCTTTTGAGAGGGCAAGTGAGTGTTTACTGGGGAATCATTAAATCAGTTTCATATGAG
CTGCACTGCCCCTCTCTGTTTCATCTTGCATTGATTGATAATGCCTGAGTGCTTGTTTTCTATG
CTTGGTGACAGTGGTATCAGAGGCTCCCAGAATGTCAGCATGGAGACACACTGCTGGGCTTAGC
TGCATTCCACCCCATTCCCAGGGAGAAAGTCTTCGGTTAAATTAACATCTGCTCAGAGGGACCG
CCAACAGATCTGATCTGCCTGTTTTAGCTTTTGTAAATATAAATAATTTATATGATTATGACAT
ATCCATACTTGAATCGGTTTTTCCATATCTTGCCTATTAGCAGATATTTCACCTATTTTCAACC
AATTAAACCTATTTGAGTAGTTTTTCCTGAAGGCAAAACGGTAATATTAATTCCTCTGTAGTGT
TGCTGCTTAGTTCGACTCAATTTGCTGGAGTTACCTGTCATTTTAAAAATAGCTTTATTTTCCC
TTGGAGACTGTTAAGAATTATGAGAGAGTTTTTTGTTTTAATTATATTTATGATGTGAAAATCC
AACAACAGTCTTTTTACTGGTAGCTCGCTATGCTCTACATAGATAACCTGCAGAACCCAATGAA
ATAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAA
GAGAACTTTCTAGAGAAACCTAGGGTGCCACCTGGTGCAGCCAGCGTTTTTATCACTGGTTTTC
CTCCCCACCCCACCCCACCCCGCCTCTAGTTATATGGAAATTTATAGTTTGAGGGTTCCTGTCG
TAATCTTGTAAGATAAAGGGTCTCACACCCAGTAAGGTTAAATTTTATATTTCACCCATCAAAA
ATAAAAAACAAAAACAAAAGAAGAAAAGCACCAAACTTGTTTTTTCAAGGAAGTTCACTCTGAT
ACCAGACTACTCTGTGTCAAGAACCATGTCTGGCACATACCTCGGAATAAGGCAAGCATCCCAG
CATCAGAGGTCATAACATGGCGAACTCGGTAATAAACCACAGGCTCTCCGTAGGGGCCACCTTA
GCTCTTTGGTTTCCAGGTGAGGTCCCACCCCCGACCCCTGCCAGAGGAATAGTCAGCCTGCAAA
GGCAGCCACGCCACCGCGACTGGGGCAGCTTCTGATGAGTCGCTTCTCTACTGAGGAAAGGTTT
TTAAGTTTGAAAAACGGTTTGTTTGGTTTTTTTTGAGAATGAAGAACTGAAGTTCACCCACGTA
GAATGAGACCGTGGAGAGAAGGAAGCTTCTCCAAGGTCAGCTCTGGGTGTTCCGGTTGGGCTGC
CATCACTTGAACGATGAGCCCCACACCTCCTCCCACTTGTATATAAGAAAACCACCGACCGCTC
ATCCTGGTCTCACCCCGACCAGTCGTCTTTTCAAATAGGTTTCCAGAAGTCAAGCCCTTGTGAC
ACACCTCCATAGATGCTATTTTTTTTTTCAGTTGTTTGTGTCATTTTCTTACAAAAGAAAAATC
AGAGTGAATGGGATATAGCTCTGAGTATTTTTCTAGTGTTTTTTATTATTGTTGTTGTTGTTGT
TGTTGTTGTTAATAAACGGTGCTGCCGGGTCATGCACACCGTGGTTCTCAACATTTCTCTGATT
TCGTTCAGCTTTTGCAAAAAATAAAAAAAAGAAAAAGGGCTACACAGTTCACACTGCAGAGTTA
AGCATTAAGCTTTCCAAGTCCTTCCCCCATCCCCGTCCGTCTGTGGCCCAGAAGAATTAAAATC
TTGTAATATAAATAGAGCATATTTATATCATTCCTCAATAGTTAATTATAGGGTTTGGTACCTT
TGTGCCTCAGGGAAGCCACGTGATTATAACTGGTTATAGACTTTCAGGGTTAGGGTGTAGAGAA
AGGAGAAAGCCATTAGAAAACATTGGAGGCCATTATGGAGGCGAGCTAATCTAGGTGCAGAAGA
TGCCAGGACCGGCGTAAGTGCGATTGTAGTAGAATTTGTTTCCCAGTGCTAGTAGGGAAATCGT
TTTTAAGTTATTACGTATACTGTATTTGGAGAGTCGAGAACTTTCCATAAAGCAGCAAGGGCCC
CTATTTTTGCTTACCAGTCTCTGCAAGTAAGAGCTCAGTATTGATTTCTGAACCCCTTTAAGAG
TTTAGTGTACACATGCTCTACATATGTGCACTAACGGTTGCTCCTTGGTTCCACTCCCTGCTTT
TCTTCCCCAGAGGTGTTCTTTCCTTTCGGTGGGCACAGAGGTGGGCAGTCATGCCACTCTCAGT
ACTGGCTTCATGCAGTCTTGCCTCTAACAGTAGAAATTAAGAGAGACAAGCCCCAGGACCTTGA
TTTCACCAGATGTGATTCTGTTCCCAGAGCTGTCAATCTCATGACCCCAGAGCTCCGCCTTTGG
GCTGAGGGTCCAAAGCTCCTGCGGTGGTGAGCATAGGTCGCTGTGGTGGTGAGCATAGGTCGAG
GCTCCAGCCCTTGCTTCATAACCCAGGGCCAATGAGAGAACTTGAGAATATTTGTAAAGGAAGC
TAAGCATTCCTGAAGTGGTAAAAAAACACAAGAATTCTGTCATTACTTTTTAGTAACACGTCCT
CACAAATGTCCACGTGCCCTCATGACTCCCTAATGGGCAGTAGGGAAAACAAACTTATTTTCCA
GGTCTGCTTAACTTTCTAAACAAAAATAAACATGCTGAAAAGGATGTTCTGCCTCTTAAGGTGA
TATCACAGGCCGCTTCTCTGTGTTAAATAATCTAGAAGTTAGGGGGCTGGGTCATATTTACCAT
GTATAGTGTTACGAGCAGTTAAATTTTATGGCTATATTTGTAAAATCTGTTCTTTTATATTTCA
TGTCAAATCAAGAAATTTATTTCTTCACTGTTGTACCTGTGGAAATACAAGCCATTTTACAGGG
GAAAAAAAATCTCCAAAAGCTATTAAACGAATCTCACCATGTTTGTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100729	(Get FASTA)	NCBI Sequence Viewer
	XP_017455153	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL88365	(Get FASTA)	NCBI Sequence Viewer
	EDL88366	(Get FASTA)	NCBI Sequence Viewer
	EDL88367	(Get FASTA)	NCBI Sequence Viewer
	EDL88368	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016629
	ENSRNOP00000016629.5
	ENSRNOP00000078130
	ENSRNOP00000078130.2

RefSeq Acc Id:

NP_001100729 ⟸ NM_001107259

- UniProtKB:

D3ZSK3 (UniProtKB/TrEMBL), A6KE60 (UniProtKB/TrEMBL), A0A8I5YCN0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFSPGQEEPSSPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRTKANGVKPSTIHVVST
PQASKAISCKGQHSISYTLSRNQTVVVEYTHDNDTDMFQVGRSTESPIDFVVTDTVSGGQNDDA
QITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPGGHMDGLTTNGVLVM
HPRGGFTDESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRT
ADGLFHAPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKEVVEEKQPWAYLSCGHVHGYHS
WGHRSDGEANERECPMCRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIP
LPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPVD

hide sequence

RefSeq Acc Id:	XP_017455153 ⟸ XM_017599664
- Peptide Label:	isoform X1
- UniProtKB:	A6KE62 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKRVWVGEAESAGNSALEQLGFSAAGEGLFSLWMCRSGEPALLSSVERSVFRPTRVLMGGLRDT RGSDPPSPTSRDSGNSEKRVLITTSKYNGALPNGDRGRRKSRFALYKRTKANGVKPSTIHVVST PQASKAISCKGQHSISYTLSRNQTVVVEYTHDNDTDMFQVGRSTESPIDFVVTDTVSGGQNDDA QITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPGGHMDGLTTNGVLVM HPRGGFTDESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRT ADGLFHAPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKEVVEEKQPWAYLSCGHVHGYHS WGHRSDGEANERECPMCRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIP LPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPVD hide sequence

Ensembl Acc Id:

ENSRNOP00000016629 ⟸ ENSRNOT00000016629

Ensembl Acc Id:

ENSRNOP00000078130 ⟸ ENSRNOT00000097636

Protein Domains

Pellino FHA Pellino RING

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZSK3-F1-model_v2	AlphaFold	D3ZSK3	1-419	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699615

Promoter ID:

EPDNEW_R10139

Type:

single initiation site

Name:

Peli2_1

Description:

pellino E3 ubiquitin protein ligase family member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	24,942,237 - 24,942,297	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565884	AgrOrtholog
BioCyc Gene	G2FUF-14129	BioCyc
Ensembl Genes	ENSRNOG00000012363	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000016629	ENTREZGENE
	ENSRNOT00000016629.7	UniProtKB/TrEMBL
	ENSRNOT00000097636	ENTREZGENE
	ENSRNOT00000097636.2	UniProtKB/TrEMBL
InterPro	Pellino	UniProtKB/TrEMBL
	Pellino_FHA	UniProtKB/TrEMBL
	Pellino_RING	UniProtKB/TrEMBL
KEGG Report	rno:305835	UniProtKB/TrEMBL
NCBI Gene	305835	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE PELLINO HOMOLOG 2	UniProtKB/TrEMBL
	PTHR12098	UniProtKB/TrEMBL
Pfam	Pellino	UniProtKB/TrEMBL
	Pellino_RING	UniProtKB/TrEMBL
PhenoGen	Peli2	PhenoGen
PIRSF	Pellino	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012363	RatGTEx
UniProt	A0A8I5YCN0	ENTREZGENE, UniProtKB/TrEMBL
	A6KE60	ENTREZGENE, UniProtKB/TrEMBL
	A6KE62	ENTREZGENE, UniProtKB/TrEMBL
	D3ZSK3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-10-05	Peli2	pellino E3 ubiquitin protein ligase family member 2	Peli2	pellino homolog 2 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-01-20	Peli2	pellino homolog 2 (Drosophila)	Peli2	pellino 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Peli2	pellino 2	RGD1565884_predicted	similar to Pellino protein homolog 2 (Pellino 2) (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565884_predicted	similar to Pellino protein homolog 2 (Pellino 2) (predicted)	LOC305835	similar to Pellino protein homolog 2 (Pellino 2)	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC305835	similar to Pellino protein homolog 2 (Pellino 2)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

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Imported Disease Annotations - CTD

RGD Manual Annotations