Tln2 (talin 2) - Rat Genome Database

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Gene: Tln2 (talin 2) Rattus norvegicus
Analyze
Symbol: Tln2
Name: talin 2
RGD ID: 1565416
Description: Predicted to enable integrin binding activity. Predicted to be involved in cell-cell adhesion and presynaptic actin cytoskeleton organization. Is active in presynapse. Orthologous to human TLN2 (talin 2); PARTICIPATES IN integrin mediated signaling pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC108351746; LOC315776; RGD1565416; similar to talin 2; talin-2; uncharacterized LOC108351746
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8876,712,112 - 77,133,361 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl876,712,112 - 77,133,361 (-)EnsemblGRCr8
mRatBN7.2867,830,920 - 68,252,240 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl867,834,326 - 68,252,219 (-)EnsemblmRatBN7.2
Rnor_6.0873,009,980 - 73,441,536 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl873,014,137 - 73,194,837 (-)Ensemblrn6Rnor6.0
Rnor_5.0877,342,736 - 77,771,053 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4871,532,270 - 71,964,142 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera873,455,547 - 73,874,934 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,4'-trichlorobiphenyl  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-methoxyethanol  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
7,12-dimethyltetraphene  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
Aroclor 1254  (ISO)
arsenic trichloride  (ISO)
atrazine  (EXP)
benzatropine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
cisplatin  (EXP,ISO)
clozapine  (ISO)
cobalt dichloride  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
decabromodiphenyl ether  (ISO)
dicrotophos  (ISO)
dimethyl sulfoxide  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (ISO)
folic acid  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
haloperidol  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
ivermectin  (ISO)
lead diacetate  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
methoxychlor  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
O-methyleugenol  (ISO)
okadaic acid  (ISO)
ouabain  (ISO)
ozone  (EXP,ISO)
paracetamol  (ISO)
PCB138  (ISO)
pirinixic acid  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (EXP,ISO)
Soman  (EXP)
sunitinib  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP)
tetraphene  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
anchoring junction  (IEA)
cytoplasm  (IBA,IEA)
cytoskeleton  (IEA)
cytosol  (ISO)
fascia adherens  (ISO)
focal adhesion  (IBA,IEA,ISO)
plasma membrane  (IBA,IEA)
presynapse  (IDA)
ruffle  (IEA)
synapse  (ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Talins and kindlins: partners in integrin-mediated adhesion. Calderwood DA, etal., Nat Rev Mol Cell Biol. 2013 Aug;14(8):503-17. doi: 10.1038/nrm3624. Epub 2013 Jul 17.
2. Recruitment and regulation of phosphatidylinositol phosphate kinase type 1 gamma by the FERM domain of talin. Di Paolo G, etal., Nature. 2002 Nov 7;420(6911):85-9. doi: 10.1038/nature01147.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:11732910   PMID:15128768   PMID:21423176  


Genomics

Comparative Map Data
Tln2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8876,712,112 - 77,133,361 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl876,712,112 - 77,133,361 (-)EnsemblGRCr8
mRatBN7.2867,830,920 - 68,252,240 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl867,834,326 - 68,252,219 (-)EnsemblmRatBN7.2
Rnor_6.0873,009,980 - 73,441,536 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl873,014,137 - 73,194,837 (-)Ensemblrn6Rnor6.0
Rnor_5.0877,342,736 - 77,771,053 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4871,532,270 - 71,964,142 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera873,455,547 - 73,874,934 (+)NCBICelera
Cytogenetic Map8q24NCBI
TLN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381562,390,550 - 62,844,631 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1562,390,512 - 62,844,631 (+)Ensemblhg38GRCh38
GRCh371562,682,749 - 63,136,830 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361560,726,802 - 60,923,883 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341560,726,801 - 60,920,733NCBI
Celera1539,819,286 - 40,016,441 (+)NCBICelera
Cytogenetic Map15q22.2NCBI
HuRef1539,762,354 - 39,959,569 (+)NCBIHuRef
CHM1_11563,058,568 - 63,256,014 (+)NCBICHM1_1
T2T-CHM13v2.01560,194,145 - 60,648,431 (+)NCBIT2T-CHM13v2.0
Tln2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39967,124,371 - 67,541,357 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl967,124,369 - 67,466,985 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38967,217,085 - 67,634,045 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl967,217,087 - 67,559,703 (-)Ensemblmm10GRCm38
MGSCv37967,064,892 - 67,407,510 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36967,017,280 - 67,338,759 (-)NCBIMGSCv36mm8
MGSCv36967,820,018 - 68,028,925 (-)NCBIMGSCv36mm8
Celera964,440,386 - 64,782,550 (-)NCBICelera
Cytogenetic Map9CNCBI
cM Map936.39NCBI
Tln2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545012,394,377 - 12,728,925 (-)Ensembl
ChiLan1.0NW_00495545012,391,049 - 12,740,232 (-)NCBIChiLan1.0ChiLan1.0
TLN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21651,638,537 - 52,092,397 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11555,814,626 - 56,268,524 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01541,337,084 - 41,790,949 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11559,635,488 - 60,088,662 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1559,892,920 - 60,088,414 (+)EnsemblpanPan2panpan1.1
TLN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13027,023,731 - 27,452,575 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3027,257,948 - 27,449,267 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3026,939,212 - 27,366,590 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03027,192,437 - 27,619,533 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3027,192,442 - 27,616,357 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13027,129,804 - 27,556,957 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03027,191,240 - 27,619,171 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03027,434,199 - 27,862,607 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tln2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640105,225,660 - 105,631,223 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647123,135,006 - 23,479,288 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647123,073,267 - 23,479,286 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TLN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1109,208,672 - 109,584,727 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11109,208,663 - 109,680,663 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21120,431,291 - 120,698,794 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TLN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12620,688,048 - 21,140,585 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2620,691,779 - 20,940,450 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666048120,250,091 - 120,703,945 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tln2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247819,623,413 - 9,965,960 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247819,626,031 - 10,030,427 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Tln2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1861,564,959 - 61,802,014 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tln2
2898 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:266
Count of miRNA genes:113
Interacting mature miRNAs:131
Transcripts:ENSRNOT00000012026, ENSRNOT00000024885, ENSRNOT00000031988, ENSRNOT00000064613
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83975280384752803Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)849849908118871671Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)839106363103375781Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)85076395195763951Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83910625884106258Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)85158969999045312Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)839106363103375781Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)84447792689477926Rat
4889938Bss89Bone structure and strength QTL 893.8tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)85899169791341052Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)839106258103375958Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83910625891341052Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)863404444108404444Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)835464071107982864Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)84754141992541419Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83910625884106258Rat
1359033Bp273Blood pressure QTL 273arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83910625884106258Rat
1331769Rf39Renal function QTL 393.871urine output (VT:0003620)timed urine volume (CMO:0000260)850763951107970527Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84444783789447837Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)84961020494610204Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)835464071107982864Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)839106363114525825Rat
1582254Kidm31Kidney mass QTL 313kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)84924517894245178Rat
724540Uae8Urinary albumin excretion QTL 85urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)839106258103375958Rat
10402857Bp380Blood pressure QTL 3800.95arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)862848139107848139Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)835464071107982864Rat
1582243Bw66Body weight QTL 663.40.0048body mass (VT:0001259)body weight (CMO:0000012)84924517894245178Rat
5684973Bss100Bone structure and strength QTL 1004.7tibia area (VT:1000281)tibia area measurement (CMO:0001382)85899169791341052Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)84447504389475043Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83910625891341052Rat
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)862848139107848139Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)863141536109261840Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)858337123103337123Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)862848139107848139Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83910625891341052Rat
1331804Cm30Cardiac mass QTL 303.77443heart mass (VT:0007028)heart wet weight (CMO:0000069)862970527107970527Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)862848139107848139Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)862848139107848139Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)862848139107848139Rat
12879883Kidm65Kidney mass QTL 650.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)862848139107848139Rat
71120Niddm21Non-insulin dependent diabetes mellitus QTL 213.73blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)866992095111992095Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)860248093105248093Rat
2313086Bss60Bone structure and strength QTL 604.10.0001tibia length (VT:0004357)tibia length (CMO:0000450)85899169791341052Rat
2293697Bmd39Bone mineral density QTL 39femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)862848139107848139Rat
1331837Bw23Body weight QTL 234.190.00007body mass (VT:0001259)body weight (CMO:0000012)855428416107963099Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)862963099107963099Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)868690349119799881Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83910625891341052Rat
2301402Bp316Blood pressure QTL 3160.005arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)862848139107848139Rat
631664Hcar3Hepatocarcinoma resistance QTL 32.90.0005liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)862982864107982864Rat

Markers in Region
D8Rat101  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8876,994,227 - 76,994,458 (+)Marker Load Pipeline
mRatBN7.2868,113,059 - 68,113,292 (+)MAPPERmRatBN7.2
Rnor_6.0873,301,526 - 73,301,756NCBIRnor6.0
Rnor_5.0877,634,371 - 77,634,601UniSTSRnor5.0
RGSC_v3.4871,823,272 - 71,823,503RGDRGSC3.4
RGSC_v3.4871,823,273 - 71,823,503UniSTSRGSC3.4
Celera873,592,919 - 73,593,149UniSTS
RGSC_v3.1871,842,326 - 71,842,557RGD
SHRSP x BN Map844.83RGD
SHRSP x BN Map844.83UniSTS
FHH x ACI Map851.31RGD
Cytogenetic Map8q24UniSTS
D8Rat74  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2867,860,359 - 67,860,578 (+)MAPPERmRatBN7.2
Rnor_6.0873,039,421 - 73,039,639NCBIRnor6.0
Rnor_5.0877,372,177 - 77,372,395UniSTSRnor5.0
RGSC_v3.4871,558,395 - 71,558,614RGDRGSC3.4
RGSC_v3.4871,558,396 - 71,558,614UniSTSRGSC3.4
Celera873,845,239 - 73,845,457UniSTS
RGSC_v3.1871,577,449 - 71,577,668RGD
SHRSP x BN Map844.82RGD
SHRSP x BN Map844.82UniSTS
Cytogenetic Map8q24UniSTS
D8Arb15  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2868,133,439 - 68,133,571 (+)MAPPERmRatBN7.2
Rnor_6.0873,320,439 - 73,320,570NCBIRnor6.0
Rnor_5.0877,653,284 - 77,653,415UniSTSRnor5.0
RGSC_v3.4871,843,628 - 71,843,760RGDRGSC3.4
RGSC_v3.4871,843,629 - 71,843,760UniSTSRGSC3.4
Celera873,572,661 - 73,572,792UniSTS
RGSC_v3.1871,862,683 - 71,862,814RGD
RH 3.4 Map8860.9RGD
RH 3.4 Map8860.9UniSTS
RH 2.0 Map8624.1RGD
SHRSP x BN Map845.61RGD
FHH x ACI Map851.3799RGD
Cytogenetic Map8q24UniSTS
D8Rat181  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8876,881,450 - 76,881,770 (+)Marker Load Pipeline
mRatBN7.2868,000,271 - 68,000,591 (+)MAPPERmRatBN7.2
Rnor_6.0873,188,197 - 73,188,516NCBIRnor6.0
Rnor_5.0877,521,499 - 77,521,818UniSTSRnor5.0
RGSC_v3.4871,710,673 - 71,710,992UniSTSRGSC3.4
RGSC_v3.4871,710,672 - 71,710,992RGDRGSC3.4
Celera873,705,137 - 73,705,456UniSTS
RGSC_v3.1871,729,726 - 71,730,046RGD
SHRSP x BN Map844.82UniSTS
SHRSP x BN Map844.82RGD
Cytogenetic Map8q24UniSTS
D8Got105  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8877,083,693 - 77,083,839 (+)Marker Load Pipeline
mRatBN7.2868,202,567 - 68,202,713 (+)MAPPERmRatBN7.2
Rnor_6.0873,391,980 - 73,392,125NCBIRnor6.0
Rnor_5.0877,721,561 - 77,721,706UniSTSRnor5.0
RGSC_v3.4871,912,856 - 71,913,002RGDRGSC3.4
RGSC_v3.4871,912,857 - 71,913,002UniSTSRGSC3.4
Celera873,504,660 - 73,504,805UniSTS
RGSC_v3.1871,931,911 - 71,932,056RGD
RH 3.4 Map8860.9RGD
RH 3.4 Map8860.9UniSTS
RH 2.0 Map8624.3RGD
Cytogenetic Map8q24UniSTS
D8Got107  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2868,044,881 - 68,045,003 (+)MAPPERmRatBN7.2
Rnor_6.0873,233,045 - 73,233,166NCBIRnor6.0
Rnor_5.0877,566,347 - 77,566,468UniSTSRnor5.0
RGSC_v3.4871,755,276 - 71,755,398RGDRGSC3.4
RGSC_v3.4871,755,277 - 71,755,398UniSTSRGSC3.4
Celera873,660,981 - 73,661,102UniSTS
RGSC_v3.1871,774,330 - 71,774,452RGD
RH 3.4 Map8884.9RGD
RH 3.4 Map8884.9UniSTS
RH 2.0 Map8630.5RGD
Cytogenetic Map8q24UniSTS
D8Got106  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2868,044,883 - 68,044,993 (+)MAPPERmRatBN7.2
Rnor_6.0873,233,047 - 73,233,156NCBIRnor6.0
Rnor_5.0877,566,349 - 77,566,458UniSTSRnor5.0
RGSC_v3.4871,755,278 - 71,755,412RGDRGSC3.4
RGSC_v3.4871,755,279 - 71,755,388UniSTSRGSC3.4
Celera873,660,991 - 73,661,100UniSTS
RGSC_v3.1871,774,333 - 71,774,442RGD
RH 3.4 Map8860.9UniSTS
RH 3.4 Map8860.9RGD
Cytogenetic Map8q24UniSTS
D8Got340  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2867,948,494 - 67,948,686 (+)MAPPERmRatBN7.2
Rnor_6.0873,136,650 - 73,136,839NCBIRnor6.0
Rnor_5.0877,469,698 - 77,469,887UniSTSRnor5.0
RGSC_v3.4871,646,892 - 71,647,081UniSTSRGSC3.4
Celera873,757,182 - 73,757,371UniSTS
Cytogenetic Map8q24UniSTS
AU047610  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8876,874,111 - 76,874,304 (+)Marker Load Pipeline
mRatBN7.2867,992,932 - 67,993,125 (+)MAPPERmRatBN7.2
Rnor_6.0873,180,859 - 73,181,050NCBIRnor6.0
Rnor_5.0877,514,161 - 77,514,352UniSTSRnor5.0
RGSC_v3.4871,703,334 - 71,703,526UniSTSRGSC3.4
Celera873,712,603 - 73,712,783UniSTS
Cytogenetic Map8q24UniSTS
RH134711  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2867,834,391 - 67,834,611 (+)MAPPERmRatBN7.2
Rnor_6.0873,013,452 - 73,013,671NCBIRnor6.0
Rnor_5.0877,346,208 - 77,346,427UniSTSRnor5.0
RGSC_v3.4871,532,428 - 71,532,647UniSTSRGSC3.4
Celera873,871,243 - 73,871,462UniSTS
RH 3.4 Map8859.1UniSTS
Cytogenetic Map8q24UniSTS
RH138905  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2868,224,463 - 68,224,643 (+)MAPPERmRatBN7.2
Rnor_6.0873,413,878 - 73,414,057NCBIRnor6.0
Rnor_5.0877,743,459 - 77,743,638UniSTSRnor5.0
RGSC_v3.4871,936,488 - 71,936,667UniSTSRGSC3.4
Celera873,483,117 - 73,483,296UniSTS
RH 3.4 Map8861.5UniSTS
Cytogenetic Map8q24UniSTS
AI787438  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8876,715,936 - 76,716,049 (+)Marker Load Pipeline
mRatBN7.2867,834,744 - 67,834,856 (+)MAPPERmRatBN7.2
Rnor_6.0873,013,805 - 73,013,916NCBIRnor6.0
Rnor_5.0877,346,561 - 77,346,672UniSTSRnor5.0
RGSC_v3.4871,532,781 - 71,532,892UniSTSRGSC3.4
Celera873,870,998 - 73,871,109UniSTS
Cytogenetic Map8q24UniSTS
BF394962  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2868,088,380 - 68,088,582 (+)MAPPERmRatBN7.2
Rnor_6.0873,276,939 - 73,277,140NCBIRnor6.0
Rnor_5.0877,610,241 - 77,610,442UniSTSRnor5.0
RGSC_v3.4871,798,929 - 71,799,130UniSTSRGSC3.4
Celera873,617,578 - 73,617,779UniSTS
RH 3.4 Map8862.1UniSTS
Cytogenetic Map8q24UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 47 59 6 311 147 11 142 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001419941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000012026   ⟹   ENSRNOP00000012026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,712,112 - 76,815,768 (-)Ensembl
mRatBN7.2 Ensembl867,834,326 - 67,934,583 (-)Ensembl
Rnor_6.0 Ensembl873,014,137 - 73,122,740 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000024885   ⟹   ENSRNOP00000024885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,712,112 - 76,981,091 (-)Ensembl
mRatBN7.2 Ensembl867,834,326 - 68,094,024 (-)Ensembl
Rnor_6.0 Ensembl873,014,137 - 73,194,837 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000031988   ⟹   ENSRNOP00000030866
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,746,372 - 77,133,361 (-)Ensembl
mRatBN7.2 Ensembl867,865,180 - 67,974,220 (-)Ensembl
Rnor_6.0 Ensembl873,044,277 - 73,164,620 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000064613   ⟹   ENSRNOP00000061714
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,712,112 - 77,133,361 (-)Ensembl
mRatBN7.2 Ensembl867,834,326 - 68,252,219 (-)Ensembl
Rnor_6.0 Ensembl873,016,749 - 73,194,837 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000081450   ⟹   ENSRNOP00000069105
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,712,112 - 77,133,361 (-)Ensembl
mRatBN7.2 Ensembl867,834,326 - 68,252,219 (-)Ensembl
Rnor_6.0 Ensembl873,014,137 - 73,194,837 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118305   ⟹   ENSRNOP00000076906
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,712,112 - 77,133,361 (-)Ensembl
mRatBN7.2 Ensembl867,834,326 - 68,252,219 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000121208   ⟹   ENSRNOP00000099929
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl876,712,112 - 77,133,361 (-)Ensembl
RefSeq Acc Id: NM_001419941   ⟹   NP_001406870
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,361 (-)NCBI
mRatBN7.2867,830,920 - 68,252,240 (-)NCBI
RefSeq Acc Id: XM_008766402   ⟹   XP_008764624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 76,975,201 (-)NCBI
mRatBN7.2867,830,920 - 68,094,011 (-)NCBI
Rnor_6.0873,009,980 - 73,282,506 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008766403   ⟹   XP_008764625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 76,906,778 (-)NCBI
mRatBN7.2867,830,920 - 68,025,593 (-)NCBI
Rnor_6.0873,009,980 - 73,213,535 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596080   ⟹   XP_017451569
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,347 (-)NCBI
mRatBN7.2867,830,920 - 68,252,223 (-)NCBI
Rnor_6.0873,009,980 - 73,441,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596082   ⟹   XP_017451571
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,308 (-)NCBI
mRatBN7.2867,830,920 - 68,252,223 (-)NCBI
Rnor_6.0873,009,980 - 73,441,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596083   ⟹   XP_017451572
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,347 (-)NCBI
mRatBN7.2867,830,920 - 68,252,223 (-)NCBI
Rnor_6.0873,009,980 - 73,441,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063265534   ⟹   XP_063121604
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,066,134 (-)NCBI
RefSeq Acc Id: XM_063265535   ⟹   XP_063121605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,340 (-)NCBI
RefSeq Acc Id: XM_063265536   ⟹   XP_063121606
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,340 (-)NCBI
RefSeq Acc Id: XM_063265537   ⟹   XP_063121607
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 77,133,347 (-)NCBI
RefSeq Acc Id: XM_063265538   ⟹   XP_063121608
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 76,789,559 (-)NCBI
RefSeq Acc Id: XM_063265539   ⟹   XP_063121609
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8876,712,112 - 76,789,232 (-)NCBI
RefSeq Acc Id: XP_008764624   ⟸   XM_008766402
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUI0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764625   ⟸   XM_008766403
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUI0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451571   ⟸   XM_017596082
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUI0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451572   ⟸   XM_017596083
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y6H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451569   ⟸   XM_017596080
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUI0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000012026   ⟸   ENSRNOT00000012026
Ensembl Acc Id: ENSRNOP00000030866   ⟸   ENSRNOT00000031988
Ensembl Acc Id: ENSRNOP00000069105   ⟸   ENSRNOT00000081450
Ensembl Acc Id: ENSRNOP00000024885   ⟸   ENSRNOT00000024885
Ensembl Acc Id: ENSRNOP00000061714   ⟸   ENSRNOT00000064613
Ensembl Acc Id: ENSRNOP00000076906   ⟸   ENSRNOT00000118305
RefSeq Acc Id: NP_001406870   ⟸   NM_001419941
- UniProtKB: A0A8I5Y6H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121607   ⟸   XM_063265537
- Peptide Label: isoform X4
- UniProtKB: D4A3B0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121606   ⟸   XM_063265536
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y6H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121605   ⟸   XM_063265535
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUI0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121604   ⟸   XM_063265534
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUI0 (UniProtKB/TrEMBL),   A0A8I5Y6H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121608   ⟸   XM_063265538
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063121609   ⟸   XM_063265539
- Peptide Label: isoform X6
Ensembl Acc Id: ENSRNOP00000099929   ⟸   ENSRNOT00000121208
Protein Domains
FERM   I/LWEQ

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZA84-F1-model_v2 AlphaFold D3ZA84 1-2542 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565416 AgrOrtholog
BioCyc Gene G2FUF-29992 BioCyc
Ensembl Genes ENSRNOG00000018373 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000012026.7 UniProtKB/TrEMBL
  ENSRNOT00000024885 ENTREZGENE
  ENSRNOT00000024885.9 UniProtKB/TrEMBL
  ENSRNOT00000031988.8 UniProtKB/TrEMBL
  ENSRNOT00000064613 ENTREZGENE
  ENSRNOT00000064613.6 UniProtKB/TrEMBL
  ENSRNOT00000081450 ENTREZGENE
  ENSRNOT00000081450.3 UniProtKB/TrEMBL
  ENSRNOT00000118305.2 UniProtKB/TrEMBL
  ENSRNOT00000121208 ENTREZGENE
  ENSRNOT00000121208.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  Alpha-catenin/vinculin-like UniProtKB/TrEMBL
  I/LWEQ domain UniProtKB/TrEMBL
  Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 UniProtKB/TrEMBL
  Talin, central domain UniProtKB/TrEMBL
InterPro Alpha-catenin/vinculin-like_sf UniProtKB/TrEMBL
  Band_41_domain UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_3-hlx UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_CS UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FERM_f0 UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  I/LWEQ_dom_sf UniProtKB/TrEMBL
  ILWEQ UniProtKB/TrEMBL
  IRS_PTB UniProtKB/TrEMBL
  PH_like_dom UniProtKB/TrEMBL
  Talin1/2-RS UniProtKB/TrEMBL
  Talin1/2_VBS2 UniProtKB/TrEMBL
  Talin_cent UniProtKB/TrEMBL
  Talin_cent_sf UniProtKB/TrEMBL
  Talin_IBS2B UniProtKB/TrEMBL
  Talin_R4 UniProtKB/TrEMBL
  TLN1-like_RS UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
  Vinculin-bd_dom UniProtKB/TrEMBL
NCBI Gene 315776 ENTREZGENE
PANTHER TALIN UniProtKB/TrEMBL
  TALIN-2 UniProtKB/TrEMBL
Pfam FERM_f0 UniProtKB/TrEMBL
  FERM_M UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  I_LWEQ UniProtKB/TrEMBL
  IRS UniProtKB/TrEMBL
  Talin_IBS2B UniProtKB/TrEMBL
  Talin_middle UniProtKB/TrEMBL
  Talin_R4 UniProtKB/TrEMBL
  Talin_VBS2 UniProtKB/TrEMBL
  TLN1-like_RS UniProtKB/TrEMBL
  VBS UniProtKB/TrEMBL
PhenoGen Tln2 PhenoGen
PROSITE FERM_2 UniProtKB/TrEMBL
  FERM_3 UniProtKB/TrEMBL
  I_LWEQ UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018373 RatGTEx
SMART B41 UniProtKB/TrEMBL
  ILWEQ UniProtKB/TrEMBL
  IRS UniProtKB/TrEMBL
Superfamily-SCOP FERM_3-hlx UniProtKB/TrEMBL
  PH domain-like UniProtKB/TrEMBL
  SSF109885 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
  Talin_cent UniProtKB/TrEMBL
  Vinculin/catenin UniProtKB/TrEMBL
UniProt A0A0G2JUI0 ENTREZGENE
  A0A8I5Y6H9 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0KYB7_RAT UniProtKB/TrEMBL
  D3ZA84_RAT UniProtKB/TrEMBL
  D3ZE09_RAT UniProtKB/TrEMBL
  D3ZT58_RAT UniProtKB/TrEMBL
  D4A3B0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A0G2JUI0 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Tln2  talin 2  LOC108351746  uncharacterized LOC108351746  Data merged from RGD:11495169 737654 PROVISIONAL
2016-08-02 LOC108351746  uncharacterized LOC108351746      Symbol and Name status set to provisional 70820 PROVISIONAL
2010-05-05 Tln2  talin 2  RGD1565416  similar to talin 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1565416  similar to talin 2   RGD1565416_predicted  similar to talin 2 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1565416_predicted  similar to talin 2 (predicted)  LOC315776  similar to talin 2  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC315776  similar to talin 2      Symbol and Name status set to provisional 70820 PROVISIONAL