Caap1 (caspase activity and apoptosis inhibitor 1) - Rat Genome Database

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Gene: Caap1 (caspase activity and apoptosis inhibitor 1) Rattus norvegicus
Analyze
Symbol: Caap1
Name: caspase activity and apoptosis inhibitor 1
RGD ID: 1560251
Description: Predicted to be involved in negative regulation of apoptotic process. Orthologous to human CAAP1 (caspase activity and apoptosis inhibitor 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; chlormequat chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC500501; LOC103692417; MGC125002; similar to RIKEN cDNA 5830433M19; uncharacterized LOC103692417; uncharacterized protein LOC500501
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85114,428,991 - 114,530,047 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5114,432,379 - 114,530,047 (-)EnsemblGRCr8
mRatBN7.25109,313,253 - 109,414,323 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5109,361,912 - 109,414,314 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5111,936,136 - 111,992,813 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05113,661,926 - 113,718,602 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05113,724,156 - 113,780,832 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05113,479,416 - 113,532,961 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5113,480,547 - 113,532,878 (-)Ensemblrn6Rnor6.0
Rnor_5.05117,424,984 - 117,477,647 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45114,800,960 - 114,853,305 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5107,988,993 - 108,041,262 (-)NCBICelera
Cytogenetic Map5q33NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:21980415  


Genomics

Comparative Map Data
Caap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85114,428,991 - 114,530,047 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5114,432,379 - 114,530,047 (-)EnsemblGRCr8
mRatBN7.25109,313,253 - 109,414,323 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5109,361,912 - 109,414,314 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5111,936,136 - 111,992,813 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05113,661,926 - 113,718,602 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05113,724,156 - 113,780,832 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05113,479,416 - 113,532,961 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5113,480,547 - 113,532,878 (-)Ensemblrn6Rnor6.0
Rnor_5.05117,424,984 - 117,477,647 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45114,800,960 - 114,853,305 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5107,988,993 - 108,041,262 (-)NCBICelera
Cytogenetic Map5q33NCBI
CAAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38926,840,685 - 26,892,802 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl926,840,685 - 26,892,819 (-)Ensemblhg38GRCh38
GRCh37926,840,683 - 26,892,800 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36926,830,683 - 26,882,725 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34926,830,683 - 26,882,725NCBI
Celera926,768,847 - 26,820,992 (-)NCBICelera
Cytogenetic Map9p21.2NCBI
HuRef926,793,567 - 26,845,716 (-)NCBIHuRef
CHM1_1926,840,431 - 26,892,615 (-)NCBICHM1_1
T2T-CHM13v2.0926,851,324 - 26,903,417 (-)NCBIT2T-CHM13v2.0
Caap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39494,388,318 - 94,445,033 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl494,388,318 - 94,445,033 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38494,500,079 - 94,556,796 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl494,500,081 - 94,556,796 (-)Ensemblmm10GRCm38
MGSCv37494,166,770 - 94,223,487 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36493,992,099 - 94,048,802 (-)NCBIMGSCv36mm8
Celera492,907,683 - 92,964,490 (-)NCBICelera
Cytogenetic Map4C5NCBI
cM Map443.32NCBI
Caap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554727,937,866 - 7,992,440 (+)Ensembl
ChiLan1.0NW_0049554727,937,702 - 7,993,252 (+)NCBIChiLan1.0ChiLan1.0
CAAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21197,648,939 - 97,703,166 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1997,658,342 - 97,709,111 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0926,688,023 - 26,739,818 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1927,295,326 - 27,346,814 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl927,295,433 - 27,346,814 (-)EnsemblpanPan2panpan1.1
CAAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11145,063,524 - 45,112,437 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1145,064,472 - 45,109,672 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1143,738,927 - 43,787,843 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01146,008,031 - 46,057,230 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1146,008,131 - 46,054,289 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11144,665,120 - 44,714,120 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01144,554,142 - 44,604,106 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01145,301,908 - 45,350,835 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Caap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947159,906,928 - 159,957,916 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366112,710,467 - 2,761,484 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366112,710,512 - 2,761,484 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAAP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1196,229,525 - 196,274,056 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11196,229,512 - 196,273,770 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21218,678,046 - 218,722,418 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CAAP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1253,164,035 - 53,218,101 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Caap1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473631,058,348 - 31,107,036 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Caap1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12160,262,698 - 160,268,320 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Caap1
711 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:73
Count of miRNA genes:61
Interacting mature miRNAs:70
Transcripts:ENSRNOT00000010173
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5102105698152749382Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)573779642118779642Rat
2303586Gluco52Glucose level QTL 522blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)5100826632145826632Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)538207390136631402Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)584630798129630798Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)599905133172190305Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)548523123134369373Rat
1298077Bp157Blood pressure QTL 157arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5114474223121056531Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)573779642118779642Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)573779642118779642Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)592583776137583776Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)565089051166764498Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)584630798129630798Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5112142946157142946Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5112142946157142946Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5110770739155770739Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5112142946157142946Rat
1582212Livw2Liver weight QTL 23.50.0004liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)5104018576124314782Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)592583776137583776Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)598972960143972960Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)592583776137583776Rat
2303618Vencon1Ventilatory control QTL 13.8respiration trait (VT:0001943)oxygen consumption (CMO:0002169)5100826632145826632Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5111236572156236572Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)573176602118176602Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584630798129630798Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)594034903139034903Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5114131300159131300Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)569474415114474415Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)595062526133270832Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)560601597137492949Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5112142946157142946Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5112142946157142946Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)582032155127032155Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)574335621156302135Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)536460764136631402Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)589369373134369373Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)569835120114835120Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)570969494136328156Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5114131300159131300Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)597492524133270832Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)573779642118779642Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)595062526133270832Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)592881678137881678Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)5104262817153890625Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001034154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001415955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008763894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063288234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005504514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005504515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005504518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010066459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC088436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC105829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000010173   ⟹   ENSRNOP00000010173
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5114,477,241 - 114,530,047 (-)Ensembl
mRatBN7.2 Ensembl5109,361,912 - 109,414,314 (-)Ensembl
Rnor_6.0 Ensembl5113,480,547 - 113,532,878 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000152713   ⟹   ENSRNOP00000101212
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5114,432,379 - 114,530,047 (-)Ensembl
RefSeq Acc Id: NM_001034154   ⟹   NP_001029326
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,477,241 - 114,530,047 (-)NCBI
mRatBN7.25109,361,512 - 109,414,318 (-)NCBI
Rnor_6.05113,480,532 - 113,532,878 (-)NCBI
Rnor_5.05117,424,984 - 117,477,647 (-)NCBI
RGSC_v3.45114,800,960 - 114,853,305 (-)RGD
Celera5107,988,993 - 108,041,262 (-)RGD
Sequence:
RefSeq Acc Id: NM_001415955   ⟹   NP_001402884
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,477,241 - 114,530,047 (-)NCBI
mRatBN7.25109,361,512 - 109,414,318 (-)NCBI
RefSeq Acc Id: XM_063288234   ⟹   XP_063144304
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,477,234 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_005504514
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
mRatBN7.25109,313,253 - 109,414,323 (-)NCBI
RefSeq Acc Id: XR_005504515
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
mRatBN7.25109,313,253 - 109,414,323 (-)NCBI
RefSeq Acc Id: XR_005504518
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
mRatBN7.25109,313,253 - 109,414,323 (-)NCBI
RefSeq Acc Id: XR_010066452
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066453
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066454
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066455
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066456
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066457
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066458
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: XR_010066459
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,428,991 - 114,530,045 (-)NCBI
RefSeq Acc Id: NP_001029326   ⟸   NM_001034154
- Peptide Label: isoform 2
- Sequence:
Ensembl Acc Id: ENSRNOP00000010173   ⟸   ENSRNOT00000010173
RefSeq Acc Id: NP_001402884   ⟸   NM_001415955
- Peptide Label: isoform 1
- UniProtKB: Q3KR90 (UniProtKB/TrEMBL),   A6JRG2 (UniProtKB/TrEMBL),   G3V6Y7 (UniProtKB/TrEMBL),   A6JRG1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063144304   ⟸   XM_063288234
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000101212   ⟸   ENSRNOT00000152713

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V6Y7-F1-model_v2 AlphaFold G3V6Y7 1-174 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693839
Promoter ID:EPDNEW_R4363
Type:initiation region
Name:Caap1_1
Description:caspase activity and apoptosis inhibitor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05113,532,918 - 113,532,978EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560251 AgrOrtholog
BioCyc Gene G2FUF-40713 BioCyc
Ensembl Genes ENSRNOG00000007299 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000010173 ENTREZGENE
  ENSRNOT00000010173.7 UniProtKB/TrEMBL
  ENSRNOT00000152713.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7382013 IMAGE-MGC_LOAD
InterPro CAAP1 UniProtKB/TrEMBL
KEGG Report rno:500501 UniProtKB/TrEMBL
MGC_CLONE MGC:125002 IMAGE-MGC_LOAD
NCBI Gene 500501 ENTREZGENE
PANTHER CASPASE ACTIVITY AND APOPTOSIS INHIBITOR 1 UniProtKB/TrEMBL
  PTHR14740 UniProtKB/TrEMBL
Pfam CAAP1 UniProtKB/TrEMBL
PhenoGen Caap1 PhenoGen
RatGTEx ENSRNOG00000007299 RatGTEx
UniProt A0A8J8Y1F1_RAT UniProtKB/TrEMBL
  A0ABK0LLS7_RAT UniProtKB/TrEMBL
  A6JRG1 ENTREZGENE, UniProtKB/TrEMBL
  A6JRG2 ENTREZGENE, UniProtKB/TrEMBL
  G3V6Y7 ENTREZGENE, UniProtKB/TrEMBL
  Q3KR90 ENTREZGENE
UniProt Secondary Q3KR90 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Caap1  caspase activity and apoptosis inhibitor 1  LOC103692417  uncharacterized LOC103692417  Data merged from RGD:9436070 737654 PROVISIONAL
2014-08-25 LOC103692417  uncharacterized LOC103692417      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-10-05 Caap1  caspase activity and apoptosis inhibitor 1  MGC125002  similar to RIKEN cDNA 5830433M19  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 MGC125002  similar to RIKEN cDNA 5830433M19      Symbol and Name status set to provisional 70820 PROVISIONAL