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Gene: Mical3 (microtubule associated monooxygenase, calponin and LIM domain containing 3) Rattus norvegicus

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Symbol:

Mical3

Name:

microtubule associated monooxygenase, calponin and LIM domain containing 3

RGD ID:

1359504

Description:

Predicted to enable actin binding activity and molecular adaptor activity. Predicted to be involved in actin filament depolymerization. Predicted to be located in nucleus. Orthologous to human MICAL3 (microtubule associated monooxygenase, calponin and LIM domain containing 3); INTERACTS WITH 6-propyl-2-thiouracil; atrazine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

F-actin-monooxygenase MICAL3; flavoprotein oxidoreductase MICAL3; LOC312683; LOC685601; microtubule associated monoxygenase, calponin and LIM domain containing 3; protein MICAL-3; protein-methionine sulfoxide oxidase MICAL3; similar to MICAL CG33208-PB, isoform B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	155,824,941 - 156,025,003 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl				GRCr8
mRatBN7.2	4	154,152,776 - 154,353,274 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	154,153,834 - 154,302,590 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	160,418,411 - 160,567,975 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	156,202,017 - 156,351,581 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	154,825,481 - 154,975,045 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	153,484,876 - 153,631,986 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	153,484,876 - 153,593,773 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	220,570,995 - 220,769,680 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	157,338,110 - 157,519,926 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	142,997,731 - 143,143,890 (-)	NCBI		Celera
RGSC_v3.1	4	157,718,223 - 157,764,768 (-)	NCBI
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(-)-demecolcine (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

butanal (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

cannabidiol (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

clobetasol (ISO)

coumarin (ISO)

Cuprizon (EXP)

dicrotophos (ISO)

doxorubicin (ISO)

ethanol (ISO)

fenthion (ISO)

FR900359 (ISO)

fulvestrant (ISO)

glycidol (EXP)

hydralazine (ISO)

inulin (ISO)

ivermectin (ISO)

lead(0) (ISO)

maneb (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methamphetamine (ISO)

methapyrilene (EXP)

methotrexate (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

monosodium L-glutamate (ISO)

N,N-diethyl-m-toluamide (EXP)

okadaic acid (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

paraquat (ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (ISO)

permethrin (EXP)

quercetin (ISO)

sodium arsenite (ISO)

tetrachloromethane (ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IBA)

actin filament depolymerization (IBA,IEA,ISO)

cytoskeleton organization (IEA,ISO)

exocytosis (IEA)

sulfur oxidation (IEA)

Cellular Component

cytoskeleton (IEA)

cytosol (IEA,ISO)

Flemming body (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

plasma membrane (IBA)

Molecular Function

actin binding (IBA,IEA,ISO)

F-actin monooxygenase activity (IEA)

FAD binding (IEA)

metal ion binding (IEA)

molecular adaptor activity (ISO)

monooxygenase activity (IEA)

oxidoreductase activity (IEA)

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (IBA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	The MICAL proteins and rab1: a possible link to the cytoskeleton?	Fischer J, etal., Biochem Biophys Res Commun. 2005 Mar 11;328(2):415-23.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:16230022	PMID:24440334

Genomics

Comparative Map Data

Mical3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	155,824,941 - 156,025,003 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl				GRCr8
mRatBN7.2	4	154,152,776 - 154,353,274 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	154,153,834 - 154,302,590 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	160,418,411 - 160,567,975 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	156,202,017 - 156,351,581 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	154,825,481 - 154,975,045 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	153,484,876 - 153,631,986 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	153,484,876 - 153,593,773 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	220,570,995 - 220,769,680 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	157,338,110 - 157,519,926 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	142,997,731 - 143,143,890 (-)	NCBI		Celera
RGSC_v3.1	4	157,718,223 - 157,764,768 (-)	NCBI
Cytogenetic Map	4	q42	NCBI

MICAL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	17,787,649 - 18,024,561 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	17,787,649 - 18,024,561 (-)	Ensembl			hg38	GRCh38
GRCh37	22	18,270,415 - 18,507,327 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	16,650,415 - 16,694,766 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	22	1,890,073 - 2,127,001 (-)	NCBI		Celera
Cytogenetic Map	22	q11.21	NCBI
HuRef	22	2,084,615 - 2,320,580 (-)	NCBI		HuRef
CHM1_1	22	18,269,994 - 18,507,198 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	18,455,325 - 18,695,978 (-)	NCBI		T2T-CHM13v2.0

Mical3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	120,908,507 - 121,150,716 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	120,908,668 - 121,107,959 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	120,931,546 - 121,173,757 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	120,931,707 - 121,130,999 (-)	Ensembl			mm10	GRCm38
MGSCv37	6	120,957,258 - 121,031,627 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	120,972,859 - 121,047,209 (-)	NCBI		MGSCv36	mm8
Celera	6	122,848,315 - 122,922,629 (-)	NCBI		Celera
Cytogenetic Map	6	F1	NCBI
cM Map	6	57.03	NCBI

Mical3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	5,820,299 - 5,983,101 (-)	Ensembl
ChiLan1.0	NW_004955454	5,820,291 - 5,983,262 (-)	NCBI	ChiLan1.0	ChiLan1.0

MICAL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	28,105,325 - 28,342,516 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	30,652,922 - 30,890,367 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	1,218,210 - 1,454,979 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	16,648,755 - 16,767,797 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	16,651,820 - 16,767,723 (-)	Ensembl			panPan2	panpan1.1

MICAL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	45,399,370 - 45,618,306 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	45,403,392 - 45,550,055 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	1,088,297 - 1,284,230 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	45,769,139 - 45,965,171 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	45,773,173 - 45,965,191 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	45,697,212 - 45,893,090 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	45,670,781 - 45,866,655 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	441,275 - 637,231 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mical3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	109,960,195 - 110,176,667 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936807	769,461 - 888,423 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936807	769,417 - 985,752 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MICAL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	69,887,892 - 70,059,494 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	69,887,884 - 70,132,969 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	72,156,759 - 72,254,310 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MICAL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	19	1,997,701 - 2,201,218 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

Mical3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	9,332,682 - 9,545,157 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624735	9,332,637 - 9,545,164 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mical3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	25,617,251 - 25,814,824 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mical3
1526 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	52
Count of miRNA genes:	50
Interacting mature miRNAs:	52
Transcripts:	ENSRNOT00000038551
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	146370897	184426481	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	134095016	179095016	Rat
1582237	Kidm34	Kidney mass QTL 34	4	0.0001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	4	149763204	169799698	Rat
61446	Coreg2	Compensatory renal growth QTL 2	3.5		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	4	150095743	159267220	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	146370897	184426481	Rat
6478757	Anxrr44	Anxiety related response QTL 44		0.01087	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
1358364	Sradr4	Stress Responsive Adrenal Weight QTL 4	4.92		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	131384565	176384565	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
6478763	Anxrr46	Anxiety related response QTL 46		0.07428	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	112427331	157427331	Rat
6478760	Anxrr45	Anxiety related response QTL 45		0.06717	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	112427331	157427331	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	123870974	168870974	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	117559384	162559384	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	140059299	181024663	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
7207480	Bss105	Bone structure and strength QTL 105	8.1		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	4	111383604	156383604	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	94638356	168870820	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	106848959	168870974	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	127263297	172263297	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	126334185	171334185	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	147299608	184426481	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
6478782	Anxrr52	Anxiety related response QTL 52		0.02091	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
1549832	Bss3	Bone structure and strength QTL 3	11		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	4	111383604	156383604	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	124700988	169700988	Rat
6478720	Alc23	Alcohol consumption QTL 23		0.00509	drinking behavior trait (VT:0001422)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	155834926	184426481	Rat
6478785	Anxrr53	Anxiety related response QTL 53		0.01397	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	100752691	179366077	Rat
1581566	Eae21	Experimental allergic encephalomyelitis QTL 21	6.2		body mass (VT:0001259)	maximum body weight loss to initial body weight ratio (CMO:0001400)	4	137447185	182447185	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	45429709	157555683	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	137430611	182430611	Rat
6478728	Anxrr36	Anxiety related response QTL 36		0.01061	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	86709649	168870974	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	134199006	168870974	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	148121375	176967367	Rat
6478733	Anxrr37	Anxiety related response QTL 37		0.00095	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	65495851	159259805	Rat
6478737	Anxrr38	Anxiety related response QTL 38		0.00159	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	116184844	161184844	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
12798525	Anxrr57	Anxiety related response QTL 57	3.21	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	148834094	168870974	Rat

Markers in Region

BE108442

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	154,220,036 - 154,220,192 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	153,549,606 - 153,549,761	NCBI	Rnor6.0
Rnor_5.0	4	220,638,885 - 220,639,040	UniSTS	Rnor5.0
RGSC_v3.4	4	157,418,345 - 157,418,500	UniSTS	RGSC3.4
Celera	4	143,062,236 - 143,062,391	UniSTS
RH 3.4 Map	4	995.6	UniSTS
Cytogenetic Map	4	q42	UniSTS

BF393440

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	154,220,920 - 154,221,056 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	153,550,490 - 153,550,625	NCBI	Rnor6.0
Rnor_5.0	4	220,639,769 - 220,639,904	UniSTS	Rnor5.0
RGSC_v3.4	4	157,419,229 - 157,419,364	UniSTS	RGSC3.4
Celera	4	143,063,120 - 143,063,255	UniSTS
RH 3.4 Map	4	994.2	UniSTS
Cytogenetic Map	4	q42	UniSTS

BF412662

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	154,266,535 - 154,266,777 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	153,596,233 - 153,596,474	NCBI	Rnor6.0
Rnor_5.0	4	220,685,295 - 220,685,536	UniSTS	Rnor5.0
RGSC_v3.4	4	157,482,108 - 157,482,349	UniSTS	RGSC3.4
Celera	4	143,108,417 - 143,108,658	UniSTS
RH 3.4 Map	4	998.6	UniSTS
Cytogenetic Map	4	q42	UniSTS

RH138455

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	154,236,687 - 154,236,876 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	153,566,386 - 153,566,574	NCBI	Rnor6.0
Rnor_5.0	4	220,655,448 - 220,655,636	UniSTS	Rnor5.0
RGSC_v3.4	4	157,452,260 - 157,452,448	UniSTS	RGSC3.4
Celera	4	143,078,576 - 143,078,764	UniSTS
RH 3.4 Map	4	998.8	UniSTS
Cytogenetic Map	4	q42	UniSTS

RH140373

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	154,187,043 - 154,187,182 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	153,516,135 - 153,516,273	NCBI	Rnor6.0
Rnor_5.0	4	220,605,249 - 220,605,387	UniSTS	Rnor5.0
RGSC_v3.4	4	157,368,992 - 157,369,130	UniSTS	RGSC3.4
Celera	4	143,028,991 - 143,029,129	UniSTS
RH 3.4 Map	4	999.6	UniSTS
Cytogenetic Map	4	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010065679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC123213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC160830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000082982 ⟹ ENSRNOP00000072316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,153,834 - 154,264,075 (-)	Ensembl
Rnor_6.0 Ensembl	4	153,484,876 - 153,593,773 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096166 ⟹ ENSRNOP00000094529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,153,834 - 154,264,075 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104269 ⟹ ENSRNOP00000087542

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,153,834 - 154,264,075 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110199 ⟹ ENSRNOP00000076562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,153,834 - 154,264,075 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110930 ⟹ ENSRNOP00000088019

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,929,974 - 155,974,734 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,257,821 - 154,302,590 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115735 ⟹ ENSRNOP00000086464

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,153,834 - 154,264,075 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119761 ⟹ ENSRNOP00000090105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl
mRatBN7.2 Ensembl	4	154,153,834 - 154,264,075 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000146641 ⟹ ENSRNOP00000101630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148842 ⟹ ENSRNOP00000101431

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	155,824,946 - 156,005,238 (-)	Ensembl

RefSeq Acc Id:

NM_001191085 ⟹ NP_001178014

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 155,974,725 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,302,581 (-)	NCBI
Rnor_6.0	4	153,484,876 - 153,631,986 (-)	NCBI
Rnor_5.0	4	220,570,995 - 220,769,680 (-)	NCBI
Celera	4	142,997,731 - 143,143,890 (-)	NCBI

Sequence:

show sequence

TGGTGCTGAGGGACACGGAGTGAGGCATGGAATGACAGCCCAGTGCAGCAAGCTACCTTTCCTG
GCTTTGCCATTCCAGAATTTCTTGCTCAAGCCAAGGAGGAGAGGCTGGGGTTGACACTGTTGCC
AGCTTTGTCCTTGTGAGACAGACAGCCCTGGGGGTAATGTCATTTTGCTTATTCCATTTCAGTG
GCATTTGGCCTGGGATTGGAGAGCCGACTCCCTCAACCTCCATCAGCCAGAAGTTGGTTTTCTC
AAGTCCTCTGTCACAGTGAAGGAAGGCTAATACCATGGCAGGATTAAGGTGACAGTGCTGGGCG
GATCAGCACCATTCCACCGCCCCTCTGTGGAGCCGTGCCAAGAGTAGGGGAACATGGAGGAGAG
GAAGCAGGAGACAACGAACCAAGCTCACGTCCTCTTCGACCGCTTTGTTCAGGCCACCACCTGC
AAGGGGACCCTCAGGGCCTTCCAAGAGCTCTGTGACCACCTGGAGCTGAAGCCCAAGGACTACC
GTTCCTTCTACCACAAACTCAAGTCCAAGCTCAACTACTGGAAGGCCAAAGCCCTCTGGGCCAA
ATTGGACAAGCGGGGCAGTCACAAAGACTACAAAAAGGGCAAAGCCTGCACGAACACAAAGTGT
CTCATCATTGGAGCTGGCCCCTGTGGTCTCCGCACGGCCATCGACCTGTCCTTGTTGGGAGCCA
AGGTGGTGGTTATTGAAAAGCGAGATGCCTTCTCCCGCAACAATGTCTTACATCTCTGGCCTTT
CACCATACATGATCTTCGAGGTCTGGGCGCCAAGAAATTCTACGGCAAGTTCTGTGCCGGAGCC
ATCGACCACATCAGTATCCGTCAGCTCCAGCTAATCCTCCTGAAGGTAGCCTTGATCTTGGGCA
TTGAAATTCATGTCAATGTGGAATTCCAAGGACTTGTCCAGCCTCCCGAGGACCAAGAGAACGA
ACGGATAGGGTGGCGAGCATTGGTGCACCCCAAAACTCATCCTGTATCAGAATATGAATTTGAA
GTGATCATCGGTGGGGATGGACGTAGGAACACGTTGGAAGGATTTCGTCGAAAAGAATTCCGTG
GCAAGCTAGCCATCGCCATTACGGCTAATTTTATCAACCGCAACACAACCGCAGAGGCCAAAGT
GGAGGAGATCAGTGGGGTGGCTTTTATATTTAACCAAAAGTTTTTCCAAGAGCTGAGAGAAGCC
ACAGGTATCGACTTAGAGAACATCGTCTACTACAAAGATGACACGCACTACTTTGTCATGACGG
CCAAAAAGCAGAGTTTGCTGGACAAAGGGGTGATACTGCATGACTACACAGACACGGAGCTGTT
GCTTTCCCGGGAGAACGTGGACCAGGAGGCCCTGCTGAACTACGCCCGGGAGGCTGCAGACTTC
TCTACCCAGCAGCAGCTGCCTTCCCTGGATTTTGCCATCAATCACTACGGGCAGCCGGACGTGG
CCATGTTTGACTTCACCTGCATGTACGCCTCTGAAAATGCTGCCTTGGTACGGGAGCAGAATGG
ACACCAGTTACTAGTAGCTTTGGTTGGGGACAGCCTCCTGGAGCCTTTCTGGCCAATGGGGACA
GGGATAGCCCGGGGCTTTCTGGCTGCTATGGACTCTGCCTGGATGGTACGAAGCTGGTCCCTGG
GCACCAGCCCCTTGGAAGTCCTGGCAGAAAGGGAAAGCATTTATAGGTTGCTGCCTCAGACCAC
CCCTGAGAACGTGAGCAAGAACTTCAGCCAGTACAGCATCGACCCTGTCACTAGGTATCCCAAT
ATTAACATCAACTTCCTCAGGCCAAGCCAGGTGCGCCATTTATACGATAGCGGGGAATCAAAAG
ATATCCACCTGGAAATGGAGAACCTGGTGAATTCCCGAACCACTCCCAAGCTGACGCGCAATGA
GTCTGTAGCTCGTTCAAGCAAACTGCTGGGGTGGTGCCAGAGACAGACAGACGGCTACTCAGGA
GTCAATGTGACAGATCTCACTATGTCTTGGAAGAGTGGTCTGGCCCTGTGTGCCATCATCCACA
GATACCGCCCGGATCTTATAGACTTTGACTCTTTGGATGAGCAAAACGTGGAGCAGAATAACCA
GCTGGCCTTTGACATCGCTGAGAAGGAACTGGGTATTTCTCCCATCATGACGGGCAAGGAGATG
GCTTCGGTGGGGGAGCCGGACAAGTTGTCCATGGTGATGTACCTCACGCAGTTCTACGAGATGT
TCAAGGACTCGCTCTCCTCCAGCGACACCCTGGACCTGAACGCAGAGGAAAAAGCTGTCCTGAT
AGCCAGCACCAAATCCCCCATCTCCTTCCTGAGCAAGCTCGGACAGACCATCTCTCGGAAGCGG
TCACCCAAGGATAAAAAGGAAAAGGATTCAGATGGGGCTGGAAAGAGGAGAAAAACCAGTCAAT
CAGAGGAGGAGGAGCCTCCCCGGAGCTATAAAGGAGAAAGGCCTACCCTGGTGAGCACCCTGAC
GGACAGGCGGATGGATGCTGCCATCGGAAACCAGAACAAAGTAAAGTTTATGGCAACCCAGCTG
CTGGCCAAGTTTGAAGAGAATGCGCCTGCTCAGTCCACTGGCGTGAGGAGACAGGGCTCCATAA
AGAAAGAGTTCCCGCAGAACCTGGGGGGCAGCGACACGTGCTACTTCTGCCAAAAGCGCGTCTA
CGTGATGGAGAGGCTGAGCGCTGAGGGCAAGTTCTTCCACCGCAGCTGCTTCAAGTGCGACTAC
TGTGCCACCACGCTGCGCCTCTCAGCCTACGCCTATGATATCGAGGACGGCAAATTCTACTGTA
AACCGCGCTACTGTTACCGACTGTCTGGCTACGCGCAAAGGAAGAGGCCAGCGGTGGCGCCACT
GTCTGGAAAGGAAGCCAAAGGACCCCTGCAGGATGGCCCCACCGCAGACACAAACGGACTGGCC
AGCGCCGCCACCAGCTCAGCCGAGAGAAGTCCAGGTGCCAGCATGAACGGCCTGGAGGAACCCA
GCATCGCCAAGAGGCTGAGGGGCACCCCCGAGAGGATCGAGCTGGAGAACTACCGCCGATCGGT
GAGGCAGGTGGAGGAGCTGGAGGAGGTACCTGAGGAGACGCAGGCCGAGCACAACCTGAGCAGC
GTGTTAGACAAAGGCACCGAAGAGGATGCGGCCAGCAGCAGTTCTGAGTCAGAGATGGAGGAGG
AGGAAGAGGAGGATGAAGAGGACCAGCTCCCCACCTCTGACCTGGGCGGGGTTCCCTGGAAGGA
GGCAGTCAGGATCCATGCCCTTCTGAAGGGAAGGAGTGAAGAGGAGCTGGAAGCCTCCAAGAAC
TTCGAGCCTGAGGAAGAGGAGGAAGAGGAGGAATATGAAGACGACGAGGAGGAGTATGATGAAG
AGGAAGAGGAGTCCAGTGAAGCCGGGAACAAGAGGCTTCAGCAGATCATAACCGCAGCGGATCC
CTTGGCGATCCAGGCTGATGTGCACTGGACACACATCCGTGAGAGAGAGGAGGAGGAGAGGATG
CTCCCACCCTCTGAGTCCTCCACTTCTAGAGCTCCTCTGGATGAGGATGACCTAGAAGAGGACG
TGGACTCTGAGCCAGCAGAGACCGAAGGGGAAGCAGCAGAGGATGGAGACCCTGGAGACACTGG
TGCTGAACTGGACGATCAGCACTGGTCTGATGATATCCCTTCTGATGCGGAAACGGAACATCGC
TTACAGAGCCAGACCAAGGTGAAAGCAGACCTGGAGCTCCGAGTGTCAGAAAACGAGGAAGAGA
AGCCATCTGATACACCAAAGCAAGAGGAGAGAGGTCCTTCCCAAGTCTCCAGCCCTAGCCAGCC
ACCTCAGAAACAAGCTGTTCTGTTCTCCCCAGCCCACAGCCCGGGGGCAGAGGAGGCCAAGCCC
CCACCTGCCTCCATTACCACCAAGGTGAAGTCCCCCGCTGAGGAGCCACTTTTCCCTGCACCTC
TGCTCCTCAGAGAAAAGCCCAAAGCTGAAGGCCCGGAGGAACAGAAAACTGTGCACTCCCCGAT
CCGATCCCAGCCCGTGGCCCTGCCCGAAGCCAGGTCGCCTACCTCACCCACCAGCAGCCTGCAG
CCGGAGTCCCTGCTGGCCCCTCCCACTCCTCCCACACCTCCCTCCACCCAACTCCCCATCTGTT
CCCAGCCCCAGCCTTCCTCGGATGCTTCCATCCCATCACCCACCAAGTCCCCCATACGCTTCCA
GCCAGTTCCAGCCAAAACATCCACACCCCTCACCCCACTCCCTGTGAAGAGCCAAGGAGACCCC
AAAGACAGGCTGAGTGGCCCTCTGGCTGTGGAGGAGGCCTTGAAGCGGAGCGATCTGGTGGAGG
AATTCTGGATGAAGAGTGCTGAGATCCGCCGCAGCCTGGGCCTTACTCCTGTGGACCGGAACAA
GGGGTCAGAGCCCAGCCTCCCCTCCCCTGCCTTGAAGCCAATATCCCTAAAGTCCTACTCAGTT
GACAAGTCACCTCAGGACGAGGGTCTCTGCCTTCTGAAACCTCCATCTGTTCCCAAGAGGTTGG
GCCTGCCAAAGTCAGCCGGTGACCAGCCCCCACTGCTGACCCCAAAGTCGCCCTCTGACAAGGA
GCTGAGGAGCAACCAGGAGGAGCGAAGGGACCTATCCAGCAGCTCGGGTCTGGGCCTCCACGGC
AGCTCCTCCAACATGAAGACCTTGGGCAGCCAGAGCTTCAACACCTCAGACTCCACCATGCTCA
CGCCACCTTCCAGCCCGCCCCCGCCCCCACCCCCCAATGAGGAACCTGCAACCCTTCGAAGGAA
ACCCCGTCAGACTTTTGAGCGCAGGGAGGCCTCGGTTATCCCCCCTCCCACTCCTGCCTCATTC
ATGCGGCCCCCTCGGGAGGCAGCCCAGCCCCCCAGGGAGGAGGTTCGTAAGTCCTTTGTGGAGA
GCGTGGATGAGATCCCCTTTGCTGATGATGTGGAGGACACCTACGATGATAAGACTGAGGACTC
CAGTCTGCAGGAGAAGTTCTTCACGCCCCCCTCCTGCTGGTCCCGTTCAGAGAAGCTCCCGGCC
AAGGAGAACGGGCGGCTCCCTCCGCTGGAGCAAGAGGTGCAGCCACAGAAAAGGGCACTGCCTC
TGGTCTCCGCAGAGGCCAAGGAGCTGGCCGAGGAGCGCATGCGAGCCCGGGAGAAGTCTGTGAA
AAGCCAGGCGCTGCGAGACGCCATGGCCAAACAGCTGAGCAGGATGCAGGCCATGGAGATGGTG
TCCTCCAGGTCCCGACCGGCACCATCCCCGGGCAAGGAACCCGGGTTGGAGGCCACCAAACACC
CAAGCCTCCGAGGCTCCCAGGAGCCCACCCTGAAGCACGAAGCTACCAGCGAAGAGATCCTCTC
CCCTCCGTCAGACTCAGGAGGCCCCGATGGCTCTGTCACCTCATCTGAGGGCTCCAGTGGAAAG
AGCAAAAAGAGGTCGTCCCTCTTCTCCCCGCGCAGGAACAAGAAAGAGAAGAAATCCAAAGGCG
AAGGAGGCCGGCCCCCAGAGAAACCCAGCCTAAGCCTCCCAGAAGATGTGGCAGCTAAGCCCAA
GTCCCTATGGAAATCAGTCTTCTCTGGGTACAAGAAGGACAAGAAGAAGAAGAGTGATGAGAAG
TCGTGCTCTAGCACACCATCCAGTGGCGCCACAGTGGACTCCGGCCAGCGCAGGGCATCTCCAA
TTGTGAGAGCAGAGCTGCATCTCCGACGCCAGCTGAGTTTCTCAGAGGACTCAGACCTGTCCAG
TGATGACATCCTTGAGAGGTCTTCCCAGAAGTCCAAACGAGAGCCCAGAACCTACACTGAGGAG
GAGCTGAGCGCTAAGCTGACACGGCGTGTGCAGAAGGCAGCTCGGAGGCAGGCTAAGCAGGAGG
AACTGAAGCGGCTGCACCGAGCCCAGATCATCCAGCGGCAACTGGAGCAAGTGGAGGAGAAGCA
GAGGCAGCTGGAGGAGAGGGGCGTTGCGGTCGAGAAGGCTCTGCGAGGCGAAGCAGGTATGGGC
AAAAAGGATGACCCCAAGCTGATGCAGGAGTGGTTCAAGCTGGTGCAGGAGAAAAACGCCATGG
TGCGCTACGAGTCGGAGCTGATGATTTTCGCCCGGGAACTGGAGCTGGAAGACCGGCAGAGCCG
GCTGCAGCAGGAGCTGAGGGAGCGGATGGCCGTGGAAGATCACCTGAAGACCGAGGAGGAGCTC
TCAGAGGAGAAGAAGATCCTGAACGAGATGCTGGAGGTGGTGGAGCAGAGAGACTCGCTGGTGG
CCCTGTTGGAGGAGCAGCGACTGCGGGAGAAAGAGGAGGACAAGGACCTGGAGGCTGCTATGCT
GTGCAAGGGCTTCAGCCTGGACTGGTCCTGA

hide sequence

RefSeq Acc Id:

NM_001415882 ⟹ NP_001402811

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,238 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,096 (-)	NCBI

RefSeq Acc Id:

XM_039107869 ⟹ XP_038963797

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107870 ⟹ XP_038963798

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,025,003 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,353,274 (-)	NCBI

RefSeq Acc Id:

XM_039107871 ⟹ XP_038963799

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 155,953,836 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,281,689 (-)	NCBI

RefSeq Acc Id:

XM_039107872 ⟹ XP_038963800

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,006,192 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,334,038 (-)	NCBI

RefSeq Acc Id:

XM_039107873 ⟹ XP_038963801

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107874 ⟹ XP_038963802

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107875 ⟹ XP_038963803

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107876 ⟹ XP_038963804

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107877 ⟹ XP_038963805

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107878 ⟹ XP_038963806

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107879 ⟹ XP_038963807

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107880 ⟹ XP_038963808

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107881 ⟹ XP_038963809

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107882 ⟹ XP_038963810

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107884 ⟹ XP_038963812

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107886 ⟹ XP_038963814

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 155,915,959 (-)	NCBI
mRatBN7.2	4	154,152,776 - 154,243,801 (-)	NCBI

RefSeq Acc Id:

XM_039107887 ⟹ XP_038963815

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,859,045 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,186,882 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_039107888 ⟹ XP_038963816

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,889,942 - 156,005,260 (-)	NCBI
mRatBN7.2	4	154,217,786 - 154,333,111 (-)	NCBI

RefSeq Acc Id:

XM_063286321 ⟹ XP_063142391

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 155,988,381 (-)	NCBI

RefSeq Acc Id:

XM_063286322 ⟹ XP_063142392

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI

RefSeq Acc Id:

XM_063286323 ⟹ XP_063142393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 156,005,260 (-)	NCBI

RefSeq Acc Id:

XM_063286324 ⟹ XP_063142394

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,824,941 - 155,923,160 (-)	NCBI

RefSeq Acc Id:

XM_063286325 ⟹ XP_063142395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,859,045 - 156,005,260 (-)	NCBI

RefSeq Acc Id:

XM_063286326 ⟹ XP_063142396

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,859,045 - 156,005,260 (-)	NCBI

RefSeq Acc Id:

XM_063286327 ⟹ XP_063142397

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,859,045 - 156,024,730 (-)	NCBI

RefSeq Acc Id:

XM_063286328 ⟹ XP_063142398

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,889,942 - 156,024,729 (-)	NCBI

RefSeq Acc Id:

XM_063286329 ⟹ XP_063142399

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,889,942 - 156,005,260 (-)	NCBI

RefSeq Acc Id:

XM_063286330 ⟹ XP_063142400

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,889,942 - 156,024,722 (-)	NCBI

RefSeq Acc Id:

XM_063286331 ⟹ XP_063142401

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,920,524 - 155,974,920 (-)	NCBI

RefSeq Acc Id:

XM_063286332 ⟹ XP_063142402

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,920,524 - 156,024,723 (-)	NCBI

RefSeq Acc Id:

XM_063286333 ⟹ XP_063142403

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,922,871 - 155,974,920 (-)	NCBI

RefSeq Acc Id:

XM_063286334 ⟹ XP_063142404

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,922,871 - 156,024,720 (-)	NCBI

RefSeq Acc Id:

XM_063286335 ⟹ XP_063142405

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,922,871 - 155,938,119 (-)	NCBI

RefSeq Acc Id:

XR_010065679

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	155,914,908 - 156,005,260 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178014	(Get FASTA)	NCBI Sequence Viewer
	NP_001402811	(Get FASTA)	NCBI Sequence Viewer
	XP_038963797	(Get FASTA)	NCBI Sequence Viewer
	XP_038963798	(Get FASTA)	NCBI Sequence Viewer
	XP_038963799	(Get FASTA)	NCBI Sequence Viewer
	XP_038963800	(Get FASTA)	NCBI Sequence Viewer
	XP_038963801	(Get FASTA)	NCBI Sequence Viewer
	XP_038963802	(Get FASTA)	NCBI Sequence Viewer
	XP_038963803	(Get FASTA)	NCBI Sequence Viewer
	XP_038963804	(Get FASTA)	NCBI Sequence Viewer
	XP_038963805	(Get FASTA)	NCBI Sequence Viewer
	XP_038963806	(Get FASTA)	NCBI Sequence Viewer
	XP_038963807	(Get FASTA)	NCBI Sequence Viewer
	XP_038963808	(Get FASTA)	NCBI Sequence Viewer
	XP_038963809	(Get FASTA)	NCBI Sequence Viewer
	XP_038963810	(Get FASTA)	NCBI Sequence Viewer
	XP_038963812	(Get FASTA)	NCBI Sequence Viewer
	XP_038963814	(Get FASTA)	NCBI Sequence Viewer
	XP_038963815	(Get FASTA)	NCBI Sequence Viewer
	XP_038963816	(Get FASTA)	NCBI Sequence Viewer
	XP_063142391	(Get FASTA)	NCBI Sequence Viewer
	XP_063142392	(Get FASTA)	NCBI Sequence Viewer
	XP_063142393	(Get FASTA)	NCBI Sequence Viewer
	XP_063142394	(Get FASTA)	NCBI Sequence Viewer
	XP_063142395	(Get FASTA)	NCBI Sequence Viewer
	XP_063142396	(Get FASTA)	NCBI Sequence Viewer
	XP_063142397	(Get FASTA)	NCBI Sequence Viewer
	XP_063142398	(Get FASTA)	NCBI Sequence Viewer
	XP_063142399	(Get FASTA)	NCBI Sequence Viewer
	XP_063142400	(Get FASTA)	NCBI Sequence Viewer
	XP_063142401	(Get FASTA)	NCBI Sequence Viewer
	XP_063142402	(Get FASTA)	NCBI Sequence Viewer
	XP_063142403	(Get FASTA)	NCBI Sequence Viewer
	XP_063142404	(Get FASTA)	NCBI Sequence Viewer
	XP_063142405	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83659	(Get FASTA)	NCBI Sequence Viewer
	AAI60830	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000072316
	ENSRNOP00000072316.2
	ENSRNOP00000076562
	ENSRNOP00000076562.1
	ENSRNOP00000086464.2
	ENSRNOP00000087542
	ENSRNOP00000087542.2
	ENSRNOP00000088019.1
	ENSRNOP00000090105.2
	ENSRNOP00000094529.2
	ENSRNOP00000101431.1
	ENSRNOP00000101630
	ENSRNOP00000101630.1

RefSeq Acc Id:

NP_001178014 ⟸ NM_001191085

- UniProtKB:

D3ZGN7 (UniProtKB/TrEMBL), A0A8I6AA21 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEERKQETTNQAHVLFDRFVQATTCKGTLRAFQELCDHLELKPKDYRSFYHKLKSKLNYWKAKA
LWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNVLH
LWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVNVEFQGLVQPPED
QENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGKLAIAITANFINRNTTA
EAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFVMTAKKQSLLDKGVILHDYTD
TELLLSRENVDQEALLNYAREAADFSTQQQLPSLDFAINHYGQPDVAMFDFTCMYASENAALVR
EQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMDSAWMVRSWSLGTSPLEVLAERESIYRLL
PQTTPENVSKNFSQYSIDPVTRYPNININFLRPSQVRHLYDSGESKDIHLEMENLVNSRTTPKL
TRNESVARSSKLLGWCQRQTDGYSGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVE
QNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKDSLSSSDTLDLNAEEK
AVLIASTKSPISFLSKLGQTISRKRSPKDKKEKDSDGAGKRRKTSQSEEEEPPRSYKGERPTLV
STLTDRRMDAAIGNQNKVKFMATQLLAKFEENAPAQSTGVRRQGSIKKEFPQNLGGSDTCYFCQ
KRVYVMERLSAEGKFFHRSCFKCDYCATTLRLSAYAYDIEDGKFYCKPRYCYRLSGYAQRKRPA
VAPLSGKEAKGPLQDGPTADTNGLASAATSSAERSPGASMNGLEEPSIAKRLRGTPERIELENY
RRSVRQVEELEEVPEETQAEHNLSSVLDKGTEEDAASSSSESEMEEEEEEDEEDQLPTSDLGGV
PWKEAVRIHALLKGRSEEELEASKNFEPEEEEEEEEYEDDEEEYDEEEEESSEAGNKRLQQIIT
AADPLAIQADVHWTHIREREEEERMLPPSESSTSRAPLDEDDLEEDVDSEPAETEGEAAEDGDP
GDTGAELDDQHWSDDIPSDAETEHRLQSQTKVKADLELRVSENEEEKPSDTPKQEERGPSQVSS
PSQPPQKQAVLFSPAHSPGAEEAKPPPASITTKVKSPAEEPLFPAPLLLREKPKAEGPEEQKTV
HSPIRSQPVALPEARSPTSPTSSLQPESLLAPPTPPTPPSTQLPICSQPQPSSDASIPSPTKSP
IRFQPVPAKTSTPLTPLPVKSQGDPKDRLSGPLAVEEALKRSDLVEEFWMKSAEIRRSLGLTPV
DRNKGSEPSLPSPALKPISLKSYSVDKSPQDEGLCLLKPPSVPKRLGLPKSAGDQPPLLTPKSP
SDKELRSNQEERRDLSSSSGLGLHGSSSNMKTLGSQSFNTSDSTMLTPPSSPPPPPPPNEEPAT
LRRKPRQTFERREASVIPPPTPASFMRPPREAAQPPREEVRKSFVESVDEIPFADDVEDTYDDK
TEDSSLQEKFFTPPSCWSRSEKLPAKENGRLPPLEQEVQPQKRALPLVSAEAKELAEERMRARE
KSVKSQALRDAMAKQLSRMQAMEMVSSRSRPAPSPGKEPGLEATKHPSLRGSQEPTLKHEATSE
EILSPPSDSGGPDGSVTSSEGSSGKSKKRSSLFSPRRNKKEKKSKGEGGRPPEKPSLSLPEDVA
AKPKSLWKSVFSGYKKDKKKKSDEKSCSSTPSSGATVDSGQRRASPIVRAELHLRRQLSFSEDS
DLSSDDILERSSQKSKREPRTYTEEELSAKLTRRVQKAARRQAKQEELKRLHRAQIIQRQLEQV
EEKQRQLEERGVAVEKALRGEAGMGKKDDPKLMQEWFKLVQEKNAMVRYESELMIFARELELED
RQSRLQQELRERMAVEDHLKTEEELSEEKKILNEMLEVVEQRDSLVALLEEQRLREKEEDKDLE
AAMLCKGFSLDWS

hide sequence

Ensembl Acc Id:

ENSRNOP00000072316 ⟸ ENSRNOT00000082982

RefSeq Acc Id:	XP_038963798 ⟸ XM_039107870
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963800 ⟸ XM_039107872
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963812 ⟸ XM_039107884
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I5Y064 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963810 ⟸ XM_039107882
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I5Y064 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963804 ⟸ XM_039107876
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963801 ⟸ XM_039107873
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963809 ⟸ XM_039107881
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963805 ⟸ XM_039107877
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963807 ⟸ XM_039107879
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963802 ⟸ XM_039107874
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963808 ⟸ XM_039107880
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963803 ⟸ XM_039107875
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963806 ⟸ XM_039107878
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963797 ⟸ XM_039107869
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963799 ⟸ XM_039107871
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963814 ⟸ XM_039107886
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_038963815 ⟸ XM_039107887
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_038963816 ⟸ XM_039107888
- Peptide Label:	isoform X21

Ensembl Acc Id:

ENSRNOP00000076562 ⟸ ENSRNOT00000110199

Ensembl Acc Id:

ENSRNOP00000087542 ⟸ ENSRNOT00000104269

Ensembl Acc Id:

ENSRNOP00000090105 ⟸ ENSRNOT00000119761

Ensembl Acc Id:

ENSRNOP00000094529 ⟸ ENSRNOT00000096166

Ensembl Acc Id:

ENSRNOP00000086464 ⟸ ENSRNOT00000115735

Ensembl Acc Id:

ENSRNOP00000088019 ⟸ ENSRNOT00000110930

RefSeq Acc Id:	NP_001402811 ⟸ NM_001415882
- UniProtKB:	D3ZGN7 (UniProtKB/TrEMBL), A0A8I6AA21 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142393 ⟸ XM_063286323
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6AHY7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142392 ⟸ XM_063286322
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142391 ⟸ XM_063286321
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A4K7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142394 ⟸ XM_063286324
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063142397 ⟸ XM_063286327
- Peptide Label:	isoform X20

RefSeq Acc Id:	XP_063142396 ⟸ XM_063286326
- Peptide Label:	isoform X19

RefSeq Acc Id:	XP_063142395 ⟸ XM_063286325
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_063142398 ⟸ XM_063286328
- Peptide Label:	isoform X22

RefSeq Acc Id:	XP_063142400 ⟸ XM_063286330
- Peptide Label:	isoform X23

RefSeq Acc Id:	XP_063142399 ⟸ XM_063286329
- Peptide Label:	isoform X23

RefSeq Acc Id:	XP_063142402 ⟸ XM_063286332
- Peptide Label:	isoform X24

RefSeq Acc Id:	XP_063142401 ⟸ XM_063286331
- Peptide Label:	isoform X24

RefSeq Acc Id:	XP_063142404 ⟸ XM_063286334
- Peptide Label:	isoform X25

RefSeq Acc Id:	XP_063142403 ⟸ XM_063286333
- Peptide Label:	isoform X25

RefSeq Acc Id:	XP_063142405 ⟸ XM_063286335
- Peptide Label:	isoform X25

Ensembl Acc Id:

ENSRNOP00000101630 ⟸ ENSRNOT00000146641

Ensembl Acc Id:

ENSRNOP00000101431 ⟸ ENSRNOT00000148842

Protein Domains

[F-actin]-monooxygenase MICAL1-3-like Rossman bMERB Calponin-homology (CH) FAD-binding LIM zinc-binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZGN7-F1-model_v2	AlphaFold	D3ZGN7	1-1997	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359504	AgrOrtholog
BioCyc Gene	G2FUF-43187	BioCyc
Ensembl Genes	ENSRNOG00000053203	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000082982	ENTREZGENE
	ENSRNOT00000082982.3	UniProtKB/TrEMBL
	ENSRNOT00000096166.2	UniProtKB/TrEMBL
	ENSRNOT00000104269	ENTREZGENE
	ENSRNOT00000104269.2	UniProtKB/TrEMBL
	ENSRNOT00000110199	ENTREZGENE
	ENSRNOT00000110199.2	UniProtKB/TrEMBL
	ENSRNOT00000110930.2	UniProtKB/TrEMBL
	ENSRNOT00000115735.2	UniProtKB/TrEMBL
	ENSRNOT00000119761.2	UniProtKB/TrEMBL
	ENSRNOT00000146641	ENTREZGENE
	ENSRNOT00000146641.1	UniProtKB/TrEMBL
	ENSRNOT00000148842.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.418.10	UniProtKB/TrEMBL
	3.50.50.60	UniProtKB/TrEMBL
	Cysteine Rich Protein	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7453653	IMAGE-MGC_LOAD
InterPro	Calponin-like_dom_sf	UniProtKB/TrEMBL
	CH-domain	UniProtKB/TrEMBL
	DUF3585	UniProtKB/TrEMBL
	F-actin_Monoox_Mical	UniProtKB/TrEMBL
	FAD/NAD-bd_sf	UniProtKB/TrEMBL
	mOase_FAD-bd	UniProtKB/TrEMBL
	Rossman_Mical	UniProtKB/TrEMBL
	Znf_LIM	UniProtKB/TrEMBL
MGC_CLONE	MGC:187522	IMAGE-MGC_LOAD
NCBI Gene	362427	ENTREZGENE
PANTHER	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	UniProtKB/TrEMBL
	PTHR23167:SF51	UniProtKB/TrEMBL
Pfam	DUF3585	UniProtKB/TrEMBL
	FAD_binding_3	UniProtKB/TrEMBL
	LIM	UniProtKB/TrEMBL
	PF00307	UniProtKB/TrEMBL
	Rossman_Mical	UniProtKB/TrEMBL
PhenoGen	Mical3	PhenoGen
PRINTS	RNGMNOXGNASE	UniProtKB/TrEMBL
PROSITE	BMERB	UniProtKB/TrEMBL
	LIM_DOMAIN_1	UniProtKB/TrEMBL
	LIM_DOMAIN_2	UniProtKB/TrEMBL
	PS50021	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000053203	RatGTEx
SMART	DUF3585	UniProtKB/TrEMBL
	LIM	UniProtKB/TrEMBL
	SM00033	UniProtKB/TrEMBL
Superfamily-SCOP	Calponin-homology	UniProtKB/TrEMBL
	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
	SSF51905	UniProtKB/TrEMBL
UniProt	A0A8I5Y064	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A4K7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A690_RAT	UniProtKB/TrEMBL
	A0A8I6AA21	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AHY7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L0V3_RAT	UniProtKB/TrEMBL
	A0ABK0L9Y9_RAT	UniProtKB/TrEMBL
	D3ZGN7	ENTREZGENE, UniProtKB/TrEMBL
	Q5XIM1_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Mical3	microtubule associated monooxygenase, calponin and LIM domain containing 3	LOC685601	similar to MICAL CG33208-PB, isoform B	Data merged from RGD:1591411	737654	PROVISIONAL
2013-04-04	Mical3	microtubule associated monooxygenase, calponin and LIM domain containing 3	Mical3	microtubule associated monoxygenase, calponin and LIM domain containing 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-01-09	LOC685601	similar to MICAL CG33208-PB, isoform B	RGD1306314_predicted	similar to KIAA0819 protein (predicted)	Data merged from RGD:1306314	1643240	APPROVED
2006-11-20	LOC685601	similar to MICAL CG33208-PB, isoform B			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-07-29	Mical3	microtubule associated monoxygenase, calponin and LIM domain containing 3			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-01-20	RGD1306314_predicted	similar to KIAA0819 protein (predicted)	LOC312683_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC312683_predicted	similar to KIAA0819 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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