Or9k7 (olfactory receptor family 9 subfamily K member 7) - Rat Genome Database

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Gene: Or9k7 (olfactory receptor family 9 subfamily K member 7) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Or9k7
Name: olfactory receptor family 9 subfamily K member 7
RGD ID: 1333941
Description: Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in plasma membrane; INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: olfactory receptor 1072; olfactory receptor gene Olr1072; olfactory receptor Olr1072; Olr1072
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr877,670,898 - 7,671,866 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.277,020,092 - 7,021,060 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl77,017,315 - 7,024,390 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx79,943,870 - 9,944,838 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0711,819,529 - 11,820,497 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.079,627,691 - 9,628,659 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.079,629,643 - 9,630,611 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl79,629,643 - 9,630,611 (-)Ensemblrn6Rnor6.0
Rnor_5.079,795,002 - 9,795,970 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.478,465,001 - 8,465,969 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera75,237,090 - 5,238,058 (-)NCBICelera
RGSC_v3.178,465,000 - 8,465,969 (-)NCBI
Cytogenetic Map7q11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Or9k7
10 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:8
Count of miRNA genes:8
Interacting mature miRNAs:8
Transcripts:ENSRNOT00000011176
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7166965846669658Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)7123748937Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7721609752216097Rat
2290372Gluco33Glucose level QTL 332.71blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)7131777942Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7170952746709527Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7132612984Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7129716167Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134650782Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7132612984Rat


Expression

RNA-SEQ Expression

appendage
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
1 20 15 2 3 17 14 11 2 6 2

Sequence


Ensembl Acc Id: ENSRNOT00000011176   ⟹   ENSRNOP00000011176
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl79,629,643 - 9,630,611 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105859   ⟹   ENSRNOP00000080841
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl77,017,315 - 7,024,390 (-)Ensembl
RefSeq Acc Id: NM_001000062   ⟹   NP_001000062
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr877,670,898 - 7,671,866 (-)NCBI
mRatBN7.277,020,092 - 7,021,060 (-)NCBI
Rnor_6.079,629,643 - 9,630,611 (-)NCBI
Rnor_5.079,795,002 - 9,795,970 (-)NCBI
RGSC_v3.478,465,001 - 8,465,969 (-)RGD
Celera75,237,090 - 5,238,058 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001000062 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL89111 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001000062   ⟸   NM_001000062
- UniProtKB: D4A7M1 (UniProtKB/TrEMBL),   A6K841 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000011176   ⟸   ENSRNOT00000011176
Ensembl Acc Id: ENSRNOP00000080841   ⟸   ENSRNOT00000105859
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A7M1-F1-model_v2 AlphaFold D4A7M1 1-322 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1333941 AgrOrtholog
BioCyc Gene G2FUF-35080 BioCyc
Ensembl Genes ENSRNOG00000008460 Ensembl
  ENSRNOG00000068277 Ensembl
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report rno:288822 UniProtKB/TrEMBL
NCBI Gene 288822 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or9k7 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008460 RatGTEx
  ENSRNOG00000068277 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A6K841 ENTREZGENE, UniProtKB/TrEMBL
  D4A7M1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or9k7  olfactory receptor family 9 subfamily K member 7  Olr1072  olfactory receptor 1072  Symbol and Name Changed 1299863 APPROVED
2008-04-30 Olr1072  olfactory receptor 1072   Olr1072_predicted  olfactory receptor 1072 (predicted)  'predicted' is removed 2292626 APPROVED
2005-02-04 Olr1072_predicted  olfactory receptor 1072 (predicted)      Symbol and Name status set to approved 70820 APPROVED