Sphkap (SPHK1 interactor, AKAP domain containing) - Rat Genome Database

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Gene: Sphkap (SPHK1 interactor, AKAP domain containing) Rattus norvegicus
Analyze
Symbol: Sphkap
Name: SPHK1 interactor, AKAP domain containing
RGD ID: 1311951
Description: Predicted to enable protein kinase A binding activity. Predicted to be located in Z disc. Predicted to be active in mitochondrion. Orthologous to human SPHKAP (SPHK1 interactor, AKAP domain containing); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A-kinase anchor protein SPHKAP; LOC316561; RGD1311951; similar to sphingosine kinase type 1-interacting protein; Skip; sphingosine kinase type 1-interacting protein; SPHK1-interactor and AKAP domain-containing protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8991,957,497 - 92,105,834 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl991,957,497 - 92,105,625 (-)EnsemblGRCr8
mRatBN7.2984,509,383 - 84,657,582 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl984,510,964 - 84,657,559 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx992,939,568 - 93,087,689 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0998,068,049 - 98,216,175 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0996,457,425 - 96,609,490 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0989,050,405 - 89,195,435 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl989,050,381 - 89,195,273 (-)Ensemblrn6Rnor6.0
Rnor_5.0988,791,639 - 88,936,765 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4982,576,572 - 82,766,985 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera981,952,558 - 82,096,633 (-)NCBICelera
RGSC_v3.1982,766,883 - 82,907,353 (-)NCBI
Cytogenetic Map9q35NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA)
mitochondrion  (IBA,ISO)
Z disc  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15057822   PMID:16739995   PMID:20394097   PMID:22084075   PMID:23376485   PMID:24625528   PMID:25002582   PMID:25074585   PMID:26376412   PMID:30053369  


Genomics

Comparative Map Data
Sphkap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8991,957,497 - 92,105,834 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl991,957,497 - 92,105,625 (-)EnsemblGRCr8
mRatBN7.2984,509,383 - 84,657,582 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl984,510,964 - 84,657,559 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx992,939,568 - 93,087,689 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0998,068,049 - 98,216,175 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0996,457,425 - 96,609,490 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0989,050,405 - 89,195,435 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl989,050,381 - 89,195,273 (-)Ensemblrn6Rnor6.0
Rnor_5.0988,791,639 - 88,936,765 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4982,576,572 - 82,766,985 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera981,952,558 - 82,096,633 (-)NCBICelera
RGSC_v3.1982,766,883 - 82,907,353 (-)NCBI
Cytogenetic Map9q35NCBI
SPHKAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382227,979,955 - 228,181,687 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2227,979,955 - 228,181,687 (-)Ensemblhg38GRCh38
GRCh372228,844,671 - 229,046,403 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362228,552,919 - 228,754,586 (-)NCBIBuild 36Build 36hg18NCBI36
Celera2222,614,003 - 222,822,314 (-)NCBICelera
Cytogenetic Map2q36.3NCBI
HuRef2220,686,452 - 220,888,169 (-)NCBIHuRef
CHM1_12228,850,926 - 229,053,065 (-)NCBICHM1_1
T2T-CHM13v2.02228,462,353 - 228,663,979 (-)NCBIT2T-CHM13v2.0
Sphkap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39183,233,163 - 83,385,853 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl183,231,860 - 83,385,921 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38183,255,442 - 83,408,411 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl183,254,139 - 83,408,200 (-)Ensemblmm10GRCm38
MGSCv37183,252,356 - 83,404,775 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36183,134,466 - 83,287,190 (-)NCBIMGSCv36mm8
Celera183,319,854 - 83,471,360 (-)NCBICelera
Cytogenetic Map1C5NCBI
cM Map142.73NCBI
Sphkap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554536,530,789 - 6,702,647 (+)Ensembl
ChiLan1.0NW_0049554536,530,796 - 6,701,189 (+)NCBIChiLan1.0ChiLan1.0
SPHKAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213130,592,990 - 130,795,095 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B130,607,960 - 130,810,063 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B115,218,846 - 115,420,826 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B234,028,622 - 234,229,874 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B234,028,622 - 234,229,874 (-)EnsemblpanPan2panpan1.1
SPHKAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12540,632,996 - 40,802,565 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2540,633,588 - 40,802,798 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2541,250,337 - 41,419,322 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02540,880,231 - 41,049,636 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2540,880,240 - 41,050,368 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12540,815,791 - 40,985,112 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02540,658,057 - 40,827,017 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02540,830,789 - 40,999,842 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Sphkap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303182,813,972 - 182,968,608 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365257,970,651 - 8,126,132 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365257,970,921 - 8,125,749 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPHKAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15129,308,627 - 129,460,960 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115129,308,621 - 129,461,142 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215143,188,649 - 143,341,659 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SPHKAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110114,004,804 - 114,197,276 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10114,004,804 - 114,196,388 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604085,254,682 - 85,450,107 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sphkap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248432,131,961 - 2,248,093 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248432,133,924 - 2,285,162 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Sphkap
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14156,078,819 - 156,219,322 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Sphkap
732 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:125
Count of miRNA genes:96
Interacting mature miRNAs:106
Transcripts:ENSRNOT00000022281
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)965657365108376720Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)986720043110356905Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)986720043121768150Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)964220169109220169Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)98672213292642305Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)964220169109220169Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)99062451792642305Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)964220169109220169Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)968875497121768150Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)983161999118999486Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)985262459109044727Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)985262459118999486Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)964220169109220169Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat

Markers in Region
D9Rat51  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8991,962,975 - 91,963,144 (+)Marker Load Pipeline
mRatBN7.2984,514,861 - 84,515,030 (+)MAPPERmRatBN7.2
Rnor_6.0989,055,884 - 89,056,052NCBIRnor6.0
Rnor_5.0988,797,118 - 88,797,286UniSTSRnor5.0
RGSC_v3.4982,580,470 - 82,580,638UniSTSRGSC3.4
RGSC_v3.4982,580,469 - 82,580,638RGDRGSC3.4
Celera981,956,456 - 81,956,624UniSTS
RGSC_v3.1982,763,889 - 82,764,057RGD
RH 3.4 Map9717.2UniSTS
RH 3.4 Map9717.2RGD
FHH x ACI Map956.73RGD
FHH x ACI Map956.73UniSTS
Cytogenetic Map9q34UniSTS
RH135126  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2984,542,077 - 84,542,290 (+)MAPPERmRatBN7.2
Rnor_6.0989,081,563 - 89,081,775NCBIRnor6.0
Rnor_5.0988,822,797 - 88,823,009UniSTSRnor5.0
RGSC_v3.4982,607,690 - 82,607,902UniSTSRGSC3.4
Celera981,983,631 - 81,983,843UniSTS
Cytogenetic Map9q34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
9 10 65 152 91 90 59 28 59 6 280 124 11 125 80 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000022281   ⟹   ENSRNOP00000022281
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl991,957,497 - 92,105,625 (-)Ensembl
mRatBN7.2 Ensembl984,510,964 - 84,657,446 (-)Ensembl
Rnor_6.0 Ensembl989,051,986 - 89,195,273 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000090881   ⟹   ENSRNOP00000072661
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl991,957,497 - 92,104,145 (-)Ensembl
mRatBN7.2 Ensembl984,510,964 - 84,656,254 (-)Ensembl
Rnor_6.0 Ensembl989,050,381 - 89,193,821 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103600   ⟹   ENSRNOP00000091046
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl991,957,497 - 92,105,625 (-)Ensembl
mRatBN7.2 Ensembl984,510,964 - 84,657,559 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113629   ⟹   ENSRNOP00000076643
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl991,957,497 - 92,105,625 (-)Ensembl
mRatBN7.2 Ensembl984,510,964 - 84,633,625 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000132437   ⟹   ENSRNOP00000101111
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl991,957,497 - 92,105,601 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000134158   ⟹   ENSRNOP00000100161
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl991,957,497 - 92,104,117 (-)Ensembl
RefSeq Acc Id: NM_001395141   ⟹   NP_001382070
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,497 - 92,105,625 (-)NCBI
mRatBN7.2984,509,383 - 84,657,523 (-)NCBI
RefSeq Acc Id: NM_001395142   ⟹   NP_001382071
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,497 - 92,105,625 (-)NCBI
mRatBN7.2984,509,383 - 84,657,523 (-)NCBI
RefSeq Acc Id: XM_006245231   ⟹   XP_006245293
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,501 - 92,104,672 (-)NCBI
mRatBN7.2984,509,383 - 84,656,555 (-)NCBI
Rnor_6.0989,050,405 - 89,194,369 (-)NCBI
Rnor_5.0988,791,639 - 88,936,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245233   ⟹   XP_006245295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,501 - 92,105,834 (-)NCBI
mRatBN7.2984,509,383 - 84,657,582 (-)NCBI
Rnor_6.0989,050,405 - 89,195,435 (-)NCBI
Rnor_5.0988,791,639 - 88,936,765 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017596483   ⟹   XP_017451972
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,501 - 92,105,136 (-)NCBI
mRatBN7.2984,509,383 - 84,657,043 (-)NCBI
Rnor_6.0989,050,405 - 89,194,882 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063267234   ⟹   XP_063123304
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,501 - 92,104,671 (-)NCBI
RefSeq Acc Id: XM_063267235   ⟹   XP_063123305
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,501 - 92,104,669 (-)NCBI
RefSeq Acc Id: XM_063267237   ⟹   XP_063123307
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8991,957,501 - 92,105,834 (-)NCBI
RefSeq Acc Id: XP_006245295   ⟸   XM_006245233
- Peptide Label: isoform X4
- UniProtKB: P0C6C0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006245293   ⟸   XM_006245231
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K3J4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451972   ⟸   XM_017596483
- Peptide Label: isoform X2
- UniProtKB: F1LNS0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072661   ⟸   ENSRNOT00000090881
Ensembl Acc Id: ENSRNOP00000022281   ⟸   ENSRNOT00000022281
Ensembl Acc Id: ENSRNOP00000076643   ⟸   ENSRNOT00000113629
Ensembl Acc Id: ENSRNOP00000091046   ⟸   ENSRNOT00000103600
RefSeq Acc Id: NP_001382070   ⟸   NM_001395141
- Peptide Label: isoform 1
- UniProtKB: A0A0G2K3J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001382071   ⟸   NM_001395142
- Peptide Label: isoform 2
- UniProtKB: A6JWC2 (UniProtKB/TrEMBL),   F1LNS0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063123307   ⟸   XM_063267237
- Peptide Label: isoform X6
- UniProtKB: A0A8I6AFF4 (UniProtKB/TrEMBL),   A0A0G2K3J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063123304   ⟸   XM_063267234
- Peptide Label: isoform X3
- UniProtKB: P0C6C0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063123305   ⟸   XM_063267235
- Peptide Label: isoform X5
- UniProtKB: A0A0G2K3J4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000101111   ⟸   ENSRNOT00000132437
Ensembl Acc Id: ENSRNOP00000100161   ⟸   ENSRNOT00000134158
Protein Domains
A-kinase anchor 110kDa C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P0C6C0-F1-model_v2 AlphaFold P0C6C0 1-1683 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311951 AgrOrtholog
BioCyc Gene G2FUF-26964 BioCyc
Ensembl Genes ENSRNOG00000016388 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000090881 ENTREZGENE
  ENSRNOT00000103600 ENTREZGENE
  ENSRNOT00000113629 ENTREZGENE
  ENSRNOT00000132437 ENTREZGENE
  ENSRNOT00000134158 ENTREZGENE
InterPro AKAP_110_C UniProtKB/Swiss-Prot
  SPHK1-interactor_AKAP_110 UniProtKB/Swiss-Prot
NCBI Gene 316561 ENTREZGENE
PANTHER A-KINASE ANCHOR PROTEIN SPHKAP UniProtKB/Swiss-Prot
  PTHR10226 UniProtKB/Swiss-Prot
Pfam AKAP_110 UniProtKB/Swiss-Prot
PhenoGen Sphkap PhenoGen
RatGTEx ENSRNOG00000016388 RatGTEx
UniProt A0A0G2K3J4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y0K8_RAT UniProtKB/TrEMBL
  A0A8I6AFF4 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0KZZ2_RAT UniProtKB/TrEMBL
  A0ABK0LBM9_RAT UniProtKB/TrEMBL
  A6JWC2 ENTREZGENE, UniProtKB/TrEMBL
  F1LNS0 ENTREZGENE, UniProtKB/TrEMBL
  P0C6C0 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-06-27     Sphkap  SPHK1 interactor, AKAP domain containing  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-27 Sphkap  SPHK1 interactor, AKAP domain containing  RGD1311951_predicted  similar to sphingosine kinase type 1-interacting protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1311951_predicted  similar to sphingosine kinase type 1-interacting protein (predicted)  LOC316561_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC316561_predicted  similar to sphingosine kinase type 1-interacting protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL