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Gene: Usp49 (ubiquitin specific peptidase 49) Rattus norvegicus

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Symbol:

Usp49

Name:

ubiquitin specific peptidase 49

RGD ID:

1310513

Description:

Predicted to enable histone binding activity and peptidase activity. Predicted to be involved in mRNA splicing, via spliceosome; negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; and protein deubiquitination. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Orthologous to human USP49 (ubiquitin specific peptidase 49); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC316211; RGD1310513; similar to hypothetical protein MGC20741; ubiquitin carboxyl-terminal hydrolase 49; ubiquitin thioesterase 49

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	USP49 (ubiquitin specific peptidase 49)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Mus musculus (house mouse):	Usp49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Usp49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	USP49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	USP49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Usp49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	USP49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	USP49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Usp49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Usp49 (ubiquitin specific peptidase 49)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	USP49 (ubiquitin specific peptidase 49)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Usp49 (ubiquitin specific peptidase 49)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	usp49 (ubiquitin specific peptidase 49)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	usp49	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	20,803,177 - 20,867,681 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	20,804,921 - 20,863,667 (-)	Ensembl				GRCr8
mRatBN7.2	9	13,305,640 - 13,366,132 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	13,308,178 - 13,366,132 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	21,888,201 - 21,945,900 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	26,952,281 - 27,010,031 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	25,251,607 - 25,309,304 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	9	24,653,749 - 24,711,497 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	9	20,431,716 - 20,489,462 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	9	20,521,453 - 20,579,198 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	9	22,473,392 - 22,531,089 (-)	NCBI		F344_StmMcwi
Rnor_6.0	9	15,314,875 - 15,375,365 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	15,317,413 - 15,375,365 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	14,239,085 - 14,299,667 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	8,774,333 - 8,832,285 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	11,060,638 - 11,117,551 (-)	NCBI		Celera
RGSC_v3.1	9	8,778,351 - 8,786,793 (-)	NCBI
Cytogenetic Map	9	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bromobenzene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

copper atom (ISO)

copper(0) (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethyl methanesulfonate (ISO)

fenvalerate (EXP)

formaldehyde (ISO)

gentamycin (EXP)

hydralazine (ISO)

hydrogen peroxide (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (EXP)

okadaic acid (ISO)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

pentanal (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

rac-lactic acid (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

Soman (EXP)

sunitinib (ISO)

temozolomide (ISO)

tetrachloromethane (EXP)

thimerosal (ISO)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin organization (IEA)

chromatin remodeling (IEA)

mRNA processing (IEA)

mRNA splicing, via spliceosome (IEA,ISO)

negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA,ISO)

protein deubiquitination (IEA,ISO)

proteolysis (IEA)

RNA splicing (IEA)

Cellular Component

cytoplasm (IBA,IEA)

nucleus (IEA)

Molecular Function

cysteine-type deubiquitinase activity (IEA,ISO)

cysteine-type endopeptidase activity (IEA,ISO)

cysteine-type peptidase activity (IEA)

histone binding (IEA,ISO)

histone H2B deubiquitinase activity (IEA,ISO)

hydrolase activity (IEA)

metal ion binding (IEA)

peptidase activity (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:14715245	PMID:15632090	PMID:23824326

Genomics

Comparative Map Data

Usp49
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	20,803,177 - 20,867,681 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	20,804,921 - 20,863,667 (-)	Ensembl				GRCr8
mRatBN7.2	9	13,305,640 - 13,366,132 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	13,308,178 - 13,366,132 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	21,888,201 - 21,945,900 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	26,952,281 - 27,010,031 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	25,251,607 - 25,309,304 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	9	24,653,749 - 24,711,497 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	9	20,431,716 - 20,489,462 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	9	20,521,453 - 20,579,198 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	9	22,473,392 - 22,531,089 (-)	NCBI		F344_StmMcwi
Rnor_6.0	9	15,314,875 - 15,375,365 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	15,317,413 - 15,375,365 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	14,239,085 - 14,299,667 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	8,774,333 - 8,832,285 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	11,060,638 - 11,117,551 (-)	NCBI		Celera
RGSC_v3.1	9	8,778,351 - 8,786,793 (-)	NCBI
Cytogenetic Map	9	q12	NCBI

USP49
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	41,789,896 - 41,895,375 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	41,789,896 - 41,895,375 (-)	Ensembl			hg38	GRCh38
GRCh37	6	41,757,634 - 41,863,113 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	41,873,361 - 41,971,077 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	6	43,318,714 - 43,416,439 (-)	NCBI		Celera
Cytogenetic Map	6	p21.1	NCBI
HuRef	6	41,484,106 - 41,581,878 (-)	NCBI		HuRef
CHM1_1	6	41,768,743 - 41,866,405 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	41,618,461 - 41,723,935 (-)	NCBI		T2T-CHM13v2.0

Usp49
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	47,941,615 - 47,997,664 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	47,941,615 - 47,997,663 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	47,630,690 - 47,686,739 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	47,630,690 - 47,686,738 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	47,767,639 - 47,821,016 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	47,093,881 - 47,147,258 (+)	NCBI		MGSCv36	mm8
Celera	17	51,067,647 - 51,120,972 (+)	NCBI		Celera
Cytogenetic Map	17	C	NCBI
cM Map	17	23.72	NCBI

Usp49
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	8,191,236 - 8,198,809 (-)	Ensembl
ChiLan1.0	NW_004955437	8,187,118 - 8,237,910 (-)	NCBI	ChiLan1.0	ChiLan1.0

USP49
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	56,282,907 - 56,389,693 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	52,152,885 - 52,256,921 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	41,375,083 - 41,479,143 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	42,678,680 - 42,781,748 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	42,683,149 - 42,695,707 (-)	Ensembl			panPan2	panpan1.1

USP49
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	10,474,873 - 10,556,900 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	10,479,733 - 10,577,918 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	10,504,358 - 10,589,769 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	10,955,129 - 11,041,174 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	10,955,164 - 11,051,627 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	10,485,701 - 10,567,699 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	10,569,381 - 10,654,952 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	10,663,097 - 10,748,867 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Usp49
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	45,957,669 - 46,049,495 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	17,991,688 - 18,000,794 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	17,946,875 - 18,002,081 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP49
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	36,981,383 - 37,052,568 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	36,978,291 - 37,054,027 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	42,393,547 - 42,458,617 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

USP49
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	30,265,322 - 30,373,547 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	30,356,698 - 30,366,940 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	41,783,918 - 41,895,090 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Usp49
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	17,266,561 - 17,274,926 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	17,226,723 - 17,281,206 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Usp49
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	82,195,210 - 82,263,698 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Usp49
575 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	656
Count of miRNA genes:	293
Interacting mature miRNAs:	357
Transcripts:	ENSRNOT00000018550
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
10054141	Gmadr4	Adrenal mass QTL 4	2.45	0.0074	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	9	1	21707400	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	1	31250552	Rat
1578675	Bss17	Bone structure and strength QTL 17	3.8		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	9	3605355	21031556	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	41763315	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	6714888	29567695	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
23	13	82	211	91	90	59	151	59	6	480	276	22	189	114	124	31	34	34

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001136470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC129162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000018550 ⟹ ENSRNOP00000018550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	20,805,715 - 20,863,667 (-)	Ensembl
mRatBN7.2 Ensembl	9	13,308,178 - 13,366,132 (-)	Ensembl
Rnor_6.0 Ensembl	9	15,317,413 - 15,375,365 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154159 ⟹ ENSRNOP00000105669

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	20,804,921 - 20,863,667 (-)	Ensembl

RefSeq Acc Id:

NM_001136470 ⟹ NP_001129942

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	20,805,715 - 20,863,667 (-)	NCBI
mRatBN7.2	9	13,308,178 - 13,366,132 (-)	NCBI
Dahl_SR_JrHsd	9	24,653,749 - 24,711,497 (-)	NCBI
Lyon_Normotensive	9	20,431,716 - 20,489,462 (-)	NCBI
Lyon_Hypertensive	9	20,521,453 - 20,579,198 (-)	NCBI
F344_StmMcwi	9	22,473,392 - 22,531,089 (-)	NCBI
Rnor_6.0	9	15,317,413 - 15,375,365 (-)	NCBI
Rnor_5.0	9	14,239,085 - 14,299,667 (-)	NCBI
RGSC_v3.4	9	8,774,333 - 8,832,285 (-)	RGD
Celera	9	11,060,638 - 11,117,551 (-)	RGD

Sequence:

show sequence

CTTGCAAGGGAGCCTTTCTGTTTCAGAATGGACTTTATCCCTCTCGGAAGTCCTTGAGGCCACT
GCCACCTAGGTCTGATTTATTTCCCAGTCCCTATTTGGGGAGCGATGAACCTTTTCTAGTCCCG
TCGAAGAGGATTTCGTAAAACAGCTGAATGCTGCCTGAGTCATCAGTGGCAAAAGTCCACACGT
GTGTGTTTGTCTGGGAGCCAAGAGTAACTTTTGCAAAACGCTGTCGTCTCGAGAACCTCCAGGT
TCGCTGGCTGCTGCTACACCGTAAAGAAAACAACAAAACATAAAAATACGCGGAAGTGGAAAGG
CCTCTTTGGAGCGGTGAGACACAGAAGGTAACAGAGAAGAGGCAAACCAGCCAGTGATTATGTG
AGAATATGGAAGACGATGGGAGCGGCTTGTTCAATGGATTAAGAAAGTGGCGACTGCGCTAAAA
CATGGATAGATGCAAACATGTAGGGCGGTTACGGCTCGCCCAGGATCACTCCATCCTGAACCCC
CAGAAGTGGTGCTGTCTGGAGTGCGCCACCACCGAGTCTGCGTGGGCTTGCCTCAAGTGCTCCC
ACGTGGCTTGCGGCCGCTACATTGAAGACCATGCACTAAAACACTTTGAAGAGACCGGACACCC
GCTGGCCATGGAGGTCCGGGATCTCTACGTGTTCTGCTACCTGTGCAAGGATTACGTGCTCAAT
GACAACCCCGAAGGGGACCTGAAGTTGCTAAGAAGCTCCCTCCTGGCTGTTCGAGGCCAGAAGC
AGGACCTGCCCGCGAGGCGTGGGCGGACGCTGCGGTCCACAGCTGCAGGCGAGGACGTGGTCCC
GCCGCAGCGTACTCCTCAGGGACAGCCGCAGATGCTCACGGCTCTGTGGTACCGGCGCCAGCGC
TTGCTGGCCAAGACGCTGCGGCTCTGGTTTGAGAAGAGCTCCCGCGGCCGTGCGCAGCTGGAGC
AGCGGCGGCAGGAGGAGGCGCTGGAGCGTAAGAAGGAGGCGGCGCGGCAGCGACGGCGCGAGGT
CAAGAGGCGGCTGCTGGAGGAGCTGGCCAGCGCGCCGCCGCGGAAGAGTGCGCGCCTGCTCCTG
CACGCTCCCGGGCCCGTGGCCGTGCGCCCTGCTACCCTCGCTACCTCCCGGCGCATGTCCGCTG
CTGCCCTCAAGCCGCGCCGTCAGCTGGCGGTGGCCCCGGGTGTTACTGGGCTGCGCAACCTGGG
TAACACCTGCTACATGAACTCCATCCTCCAGGTGCTCAGCCACCTCCAGAAGTTCCGGGAATGT
TTCCTGAACCTCGACCCCTCCACCTCCGAGCACCTGTTTCCCCAAGCAACCAACGGGAAGGCTC
AGATCCCTAGCAGGCCAGCCAGCAGCACTGCCGCGGGGTTCTCAGTAAGGAGTGACCGGGCCCA
GGGGTTCGAACCTCAGGGCTTCTGCTGGAGCAGCGGAGCCTCCATCAGCAGGAGCCTAGAGCTC
ATTCAGAACAAGGAACCCAGCTCAAAGCACATTTCTCTCTGCCACGAACTGCACACCCTCTTCC
GAGTCATGTGGTCTGGGAAGTGGGCGCTGGTATCACCCTTTGCCATGCTTCACTCCGTGTGGAG
CCTGATTCCCGCCTTCCGAGGCTACGATCAGCAGGATGCGCAGGAATTTCTCTGCGAACTGCTG
CACAAGGTACAGCAGGAGCTTGAGTCTGAGGGCTCCACACGCCGGATCCTCATCCCCTTCTCCC
AGAGGAAGCTCACCAAGCAGGTCTTAAAGGTGGTGAACACTATATTTCATGGGCAGCTGCTCAG
TCAGGTCACATGTGTATCATGCAATTATAAATCCAATACCATTGAGCCCTTTTGGGATCTATCC
CTGGAATTTCCTGAACGATACCACTGCGTAGAGAAGGGGTTTGTCCCTTTGAATCAGACAGAGT
GCCTGCTCACTGAAATGCTAGCCAAGTTCACCGAGACAGAGGCCCTGGAGGGGAGAATCTACGC
TTGTGACCAGTGTAACAGCAAACGACGAAAGTCCAACCCCAAACCCCTTGTTCTGAGTGAAGCT
AGGAAGCAGTTAATGATCTACAGACTACCTCAGGTCCTCCGGCTACACCTTAAAAGATTCAGGT
GGTCTGGCCGTAACCATCGTGAGAAGATCGGGGTCCATGTCGTCTTTGATCAGGTGTTAACCAT
GGAACCTTACTGCTGCGGGGACATGCTCTCCTCCCTTGACAAAGACACCTTTGCCTATGACCTC
TCCGCAGTGGTCATGCATCACGGGAAAGGGTTTGGCTCAGGACACTACACAGCCTATTGCTACA
ACACAGAGGGAGGTTTTTGGGTCCACTGCAATGACTCAAAGCTGGATGTATGCAGTGTGGAGGA
AGTGTGCAAAACCCAGGCCTACATTCTTTTTTACACTCGAAGAACAGTTCAGGGCAGCGCAAAA
CTCTCAGAACCCCATCTCCGAGCTCAGGTGCACTCCAGCAGCAAGGACGATCGCAGAACATACA
CATTTCCCTGACTGGGAGGCAAGCATCAAAATGGCCTCCAGCTCTCCTCTCGGGAAATAAGGCT
TGCCACAGTAACAGATTCCTGGGGTTGCCACACTGGGTCTAGGGGAGAAATGCCCTGTGATTCC
TGCTCTGTCAAAAAATTGGTAGTTACTTTCTTGTGAAACCATGCAAATCCCTCCTTTCATAAAA
ACAATCTAAAGGAGTAGCTTCTATGAAGATTCTTTTGTCAGATGCTTCTGGAAAACAGGGACCT
GGGTAGAGGAGACGGGGTAAGCGATGAGCCAGCCATGAGAACAGTCATGTCTGTCTGTCATGAG
TCCCCTATTCATCAGGCCCTCCCCGAAGCACTGCACAGAGTACATGAGGGCCCCGGGCTGAGAG
CTGGTGGCAAAGACTGGTCCCAACACAGAAGGTGAAGTCACAGGAGTTATTCACTCTAAGAAGG
TAACCATCAAGAGTCATAGCTTGCAGACTTCATTTCTTAGGAGAGAACAGTTGAAGAGTGAGGG
GCATGGAGCCCCTCCATGCCAACGGGAAGGCTGTCTGTCATAGCTTGTCTTCTCCTGAGCTGTT
GTCACCTTGTCACTCCACATGGTGAAGCTGAGACTTGAGCCATCCCTAAGGCAGTCAGGAGGAC
ACATAGACCTGTGTGTGCATGGTCTGTGTGAGCTAAGCCATGGACACTCCTGACTTCCCCAGTC
CTGTAGCAAGGGCTGGGCTCAGAGTCATGGCTTGGTTTGGATCGGTTTTTGTCAGTTGTCAGAA
GCTTTCACAGAATGCAGTGAGGGTGAGCTGGGCTTGTCTGAATGACTGCTGCCCCTAAGGCCTC
ACCTTATGTGACATGAAGGTTCTCCCCTGCCCCTTGCTTCCCTGTGTGTGAGCAGTGCTTAGGG
ATCGGCTGTGTGGCTGCTGTGGCCCTGGCCTGTTCTATCCCAGTGTGCTGTTCTTCACCCCTGC
TGCTTTGGCCACAAGGAATACAGCAAGACTGTCTCTTACTCTGGAATCAGTAAAAACACATCTC
TAAAGTCCACTCCGTCTCTGCGGGAGGAGTGCTCAGAGCCTTCCTGTCAGGCACAGTAAGCTTC
TTCCCCTTGGCAGTGGCGACTGCGGTGCCCCACAGCCTCCCCTGCGAGTGCTGTCTTGATTACG
TAGCTCGTGTTGATGTCTGCGTTCAGGCAGAGCAGTTGTCACTTGGTGGGAGTTGTAGGGGTGG
GGAACAGGATGGGGAGGCTGAGGAGGCACCACCACACGTCCAGGCACATCTGTGGTGTTTACTG
CTGCTCTCCTTTGAGGTGAGCTCTCCTGTAGGCCTGCCAGACATCAGCAACACGGAAGAAATCA
GACAGAAAGTGGCTCATCCTGACAGGGATGGCGTGCTGGATTTGAACTTGCTTTTTAATAACAC
TGTGAGGTTTCTGTAATATTTAGCTTTTATTTGGAAGCGATAACGTAAGGCATTGTTGTGCTGT
TTGGTTTTTACTGCCTATTTCAGGCTTTTTTCTGAGCTTTGCTTGGGCTCCTCCTCTCCTGGGC
ACTGTTTTAGGGTGTCCCGGCTGCCCACCCTGCCTGAGGTTCTGATGTAAAGCTGTACCCCTTC
AGGGAGGTCTACATTGCTAAGATGGCTGATGGTGATGATTTGCTACCGTGGTAGGAAAGCCCAT
TCGAAATCAAAACCTGTGCTGACACACCCTGTAAGGCCAGCACTCGTTAGGCTGAGGCAGGGGG
ATCATGAATTCAAAGCTCCATTGTGAGGCCCTGTTTGAAAAGCAAAATCAACAAACTATAGAGA
ATAGAAAACAAAGGAAGTAAGACTGGACTGCACCTCACCTTAAACCTGTGTTGTTTTTTCTAGA
AGGAGAACCTGTAGGCAGAGAACACAGACCTGCCTGTCTAGGGGGAACACATTAGAAGACTCTT
ACTCAGTTTTTAAAGATAGTTTTATAGCAGCTATCAGCAGGACTGGTAAGCACATTAGGGACTT
CATAAAGCTTAACTGCCCACCCACCTATGAGATTAGTAAAATCGCTTAAAGTAAGTGGGAACTG
AAACCAGCTTCTCCACTGAGCCACCCTCAGGGAGGTGGACACCTAGCACTGGAAGCAGCAGCGT
GAGGGAGGTAAGAGTGTGGTGCTTAAGGAGACCTCTGCTGCAGAGGAGCTATAGGGTCCGGGCT
GCTATGCTGCACTGTCCTCTGCTCTGGTGCCTGCACAGCCAAAGCACAGCACTGTCAGCTGCAT
CACAGTGAAACATTCTAAAAAGAAAGGACAGACAGATCTTGACTAGCTGACTCCAGGACAAACC
CTAGTGCTGCTCTCCCAGCTGCAGTCTCGGTCTGTGAACCCTTTGTAATTGGCTGGTGTGTTTA
CTTACTGCTGTAGCCAGCCAAGACAAATATACCCCAGCCCTCAAAAATGACTTCTTACCTCAGT
CTAGCCTGGCCCTCATGCTGTGGTTGCCTCTCAGAGCAGGTACCATCACTAGTACCAAGACAGC
AGGGACACCTTGGCACCCAGAACCGCAGCTCTCACCCCAGGGCAGGAGAGCTTTTAGATGTTGC
TTGGAGCGTCAAGAATAAAACTGGAAACTGTGGAAGAGTTACTGTGTCCTATGGACTCAATAGC
AGAGTTTATTTTTGTTCACAGTGGCAAGGTCCATGATTGTATGAGGTCCCTGCTCTGGCTATGC
CTTCAGCTCCATCCACATTCAGGGGAAGAACCAATGAGGTGGACTGGCCAGCAGTGCCCCGAGT
AAGCCGAGTCGATGGTACAGAACAAAAATTGAGGGGAGGGGGGATCTGAAATTTGTTTTACTGA
AAAAGCTTTGTGAACTAATTTTCTACAATTGATAAAATTTGGTGCCTTGTA

hide sequence

RefSeq Acc Id:

XM_006244435 ⟹ XP_006244497

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	20,803,177 - 20,826,448 (-)	NCBI
mRatBN7.2	9	13,305,640 - 13,323,918 (-)	NCBI
Rnor_6.0	9	15,314,875 - 15,333,131 (-)	NCBI
Rnor_5.0	9	14,239,085 - 14,299,667 (-)	NCBI

Sequence:

show sequence

CCTTGGTGCTGGGGTTAGAGGTGTGAGCTACCATGTCCAGATTAAGAAAGTGGCGACTGCGCTA
AAACATGGATAGATGCAAACATGTAGGGCGGTTACGGCTCGCCCAGGATCACTCCATCCTGAAC
CCCCAGAAGTGGTGCTGTCTGGAGTGCGCCACCACCGAGTCTGCGTGGGCTTGCCTCAAGTGCT
CCCACGTGGCTTGCGGCCGCTACATTGAAGACCATGCACTAAAACACTTTGAAGAGACCGGACA
CCCGCTGGCCATGGAGGTCCGGGATCTCTACGTGTTCTGCTACCTGTGCAAGGATTACGTGCTC
AATGACAACCCCGAAGGGGACCTGAAGTTGCTAAGAAGCTCCCTCCTGGCTGTTCGAGGCCAGA
AGCAGGACCTGCCCGCGAGGCGTGGGCGGACGCTGCGGTCCACAGCTGCAGGCGAGGACGTGGT
CCCGCCGCAGCGTACTCCTCAGGGACAGCCGCAGATGCTCACGGCTCTGTGGTACCGGCGCCAG
CGCTTGCTGGCCAAGACGCTGCGGCTCTGGTTTGAGAAGAGCTCCCGCGGCCGTGCGCAGCTGG
AGCAGCGGCGGCAGGAGGAGGCGCTGGAGCGTAAGAAGGAGGCGGCGCGGCAGCGACGGCGCGA
GGTCAAGAGGCGGCTGCTGGAGGAGCTGGCCAGCGCGCCGCCGCGGAAGAGTGCGCGCCTGCTC
CTGCACGCTCCCGGGCCCGTGGCCGTGCGCCCTGCTACCCTCGCTACCTCCCGGCGCATGTCCG
CTGCTGCCCTCAAGCCGCGCCGTCAGCTGGCGGTGGCCCCGGGTGTTACTGGGCTGCGCAACCT
GGGTAACACCTGCTACATGAACTCCATCCTCCAGGTGCTCAGCCACCTCCAGAAGTTCCGGGAA
TGTTTCCTGAACCTCGACCCCTCCACCTCCGAGCACCTGTTTCCCCAAGCAACCAACGGGAAGG
CTCAGATCCCTAGCAGGCCAGCCAGCAGCACTGCCGCGGGGTTCTCAGTAAGGAGTGACCGGGC
CCAGGGGTTCGAACCTCAGGGCTTCTGCTGGAGCAGCGGAGCCTCCATCAGCAGGAGCCTAGAG
CTCATTCAGAACAAGGAACCCAGCTCAAAGCACATTTCTCTCTGCCACGAACTGCACACCCTCT
TCCGAGTCATGTGGTCTGGGAAGTGGGCGCTGGTATCACCCTTTGCCATGCTTCACTCCGTGTG
GAGCCTGATTCCCGCCTTCCGAGGCTACGATCAGCAGGATGCGCAGGAATTTCTCTGCGAACTG
CTGCACAAGGTACAGCAGGAGCTTGAGTCTGAGGGCTCCACACGCCGGATCCTCATCCCCTTCT
CCCAGAGGAAGCTCACCAAGCAGGTCTTAAAGGTGGTGAACACTATATTTCATGGGCAGCTGCT
CAGTCAGGTCACATGTGTATCATGCAATTATAAATCCAATACCATTGAGCCCTTTTGGGATCTA
TCCCTGGAATTTCCTGAACGATACCACTGCGTAGAGAAGGGGTTTGTCCCTTTGAATCAGACAG
AGTGCCTGCTCACTGAAATGCTAGCCAAGTTCACCGAGACAGAGGCCCTGGAGGGGAGAATCTA
CGCTTGTGACCAGTGTAACAGCAAACGACGAAAGTCCAACCCCAAACCCCTTGTTCTGAGTGAA
GCTAGGAAGCAGTTAATGATCTACAGACTACCTCAGGTCCTCCGGCTACACCTTAAAAGATTCA
GGTGGTCTGGCCGTAACCATCGTGAGAAGATCGGGGTCCATGTCGTCTTTGATCAGGTGTTAAC
CATGGAACCTTACTGCTGCGGGGACATGCTCTCCTCCCTTGACAAAGACACCTTTGCCTATGAC
CTCTCCGCAGTGGTCATGCATCACGGGAAAGGGTTTGGCTCAGGACACTACACAGCCTATTGCT
ACAACACAGAGGGAGGTTTTTGGGTCCACTGCAATGACTCAAAGCTGGATGTATGCAGTGTGGA
GGAAGTGTGCAAAACCCAGGCCTACATTCTTTTTTACACTCGAAGAACAGTTCAGGGCAGCGCA
AAACTCTCAGAACCCCATCTCCGAGCTCAGGTGCACTCCAGCAGCAAGGACGATCGCAGAACAT
ACACATTTCCCTGACTGGGAGGCAAGCATCAAAATGGCCTCCAGCTCTCCTCTCGGGAAATAAG
GCTTGCCACAGTAACAGATTCCTGGGGTTGCCACACTGGGTCTAGGGGAGAAATGCCCTGTGAT
TCCTGCTCTGTCAAAAAATTGGTAGTTACTTTCTTGTGAAACCATGCAAATCCCTCCTTTCATA
AAAACAATCTAAAGGAGTAGCTTCTATGAAGATTCTTTTGTCAGATGCTTCTGGAAAACAGGGA
CCTGGGTAGAGGAGACGGGGTAAGCGATGAGCCAGCCATGAGAACAGTCATGTCTGTCTGTCAT
GAGTCCCCTATTCATCAGGCCCTCCCCGAAGCACTGCACAGAGTACATGAGGGCCCCGGGCTGA
GAGCTGGTGGCAAAGACTGGTCCCAACACAGAAGGTGAAGTCACAGGAGTTATTCACTCTAAGA
AGGTAACCATCAAGAGTCATAGCTTGCAGACTTCATTTCTTAGGAGAGAACAGTTGAAGAGTGA
GGGGCATGGAGCCCCTCCATGCCAACGGGAAGGCTGTCTGTCATAGCTTGTCTTCTCCTGAGCT
GTTGTCACCTTGTCACTCCACATGGTGAAGCTGAGACTTGAGCCATCCCTAAGGCAGTCAGGAG
GACACATAGACCTGTGTGTGCATGGTCTGTGTGAGCTAAGCCATGGACACTCCTGACTTCCCCA
GTCCTGTAGCAAGGGCTGGGCTCAGAGTCATGGCTTGGTTTGGATCGGTTTTTGTCAGTTGTCA
GAAGCTTTCACAGAATGCAGTGAGGGTGAGCTGGGCTTGTCTGAATGACTGCTGCCCCTAAGGC
CTCACCTTATGTGACATGAAGGTTCTCCCCTGCCCCTTGCTTCCCTGTGTGTGAGCAGTGCTTA
GGGATCGGCTGTGTGGCTGCTGTGGCCCTGGCCTGTTCTATCCCAGTGTGCTGTTCTTCACCCC
TGCTGCTTTGGCCACAAGGAATACAGCAAGACTGTCTCTTACTCTGGAATCAGTAAAAACACAT
CTCTAAAGTCCACTCCGTCTCTGCGGGAGGAGTGCTCAGAGCCTTCCTGTCAGGCACAGTAAGC
TTCTTCCCCTTGGCAGTGGCGACTGCGGTGCCCCACAGCCTCCCCTGCGAGTGCTGTCTTGATT
ACGTAGCTCGTGTTGATGTCTGCGTTCAGGCAGAGCAGTTGTCACTTGGTGGGAGTTGTAGGGG
TGGGGAACAGGATGGGGAGGCTGAGGAGGCACCACCACACGTCCAGGCACATCTGTGGTGTTTA
CTGCTGCTCTCCTTTGAGGTGAGCTCTCCTGTAGGCCTGCCAGACATCAGCAACACGGAAGAAA
TCAGACAGAAAGTGGCTCATCCTGACAGGGATGGCGTGCTGGATTTGAACTTGCTTTTTAATAA
CACTGTGAGGTTTCTGTAATATTTAGCTTTTATTTGGAAGCGATAACGTAAGGCATTGTTGTGC
TGTTTGGTTTTTACTGCCTATTTCAGGCTTTTTTCTGAGCTTTGCTTGGGCTCCTCCTCTCCTG
GGCACTGTTTTAGGGTGTCCCGGCTGCCCACCCTGCCTGAGGTTCTGATGTAAAGCTGTACCCC
TTCAGGGAGGTCTACATTGCTAAGATGGCTGATGGTGATGATTTGCTACCGTGGTAGGAAAGCC
CATTCGAAATCAAAACCTGTGCTGACACACCCTGTAAGGCCAGCACTCGTTAGGCTGAGGCAGG
GGGATCATGAATTCAAAGCTCCATTGTGAGGCCCTGTTTGAAAAGCAAAATCAACAAACTATAG
AGAATAGAAAACAAAGGAAGTAAGACTGGACTGCACCTCACCTTAAACCTGTGTTGTTTTTTCT
AGAAGGAGAACCTGTAGGCAGAGAACACAGACCTGCCTGTCTAGGGGGAACACATTAGAAGACT
CTTACTCAGTTTTTAAAGATAGTTTTATAGCAGCTATCAGCAGGACTGGTAAGCACATTAGGGA
CTTCATAAAGCTTAACTGCCCACCCACCTATGAGATTAGTAAAATCGCTTAAAGTAAGTGGGAA
CTGAAACCAGCTTCTCCACTGAGCCACCCTCAGGGAGGTGGACACCTAGCACTGGAAGCAGCAG
CGTGAGGGAGGTAAGAGTGTGGTGCTTAAGGAGACCTCTGCTGCAGAGGAGCTATAGGGTCCGG
GCTGCTATGCTGCACTGTCCTCTGCTCTGGTGCCTGCACAGCCAAAGCACAGCACTGTCAGCTG
CATCACAGTGAAACATTCTAAAAAGAAAGGACAGACAGATCTTGACTAGCTGACTCCAGGACAA
ACCCTAGTGCTGCTCTCCCAGCTGCAGTCTCGGTCTGTGAACCCTTTGTAATTGGCTGGTGTGT
TTACTTACTGCTGTAGCCAGCCAAGACAAATATACCCCAGCCCTCAAAAATGACTTCTTACCTC
AGTCTAGCCTGGCCCTCATGCTGTGGTTGCCTCTCAGAGCAGGTACCATCACTAGTACCAAGAC
AGCAGGGACACCTTGGCACCCAGAACCGCAGCTCTCACCCCAGGGCAGGAGAGCTTTTAGATGT
TGCTTGGAGCGTCAAGAATAAAACTGGAAACTGTGGAAGAGTTACTGTGTCCTATGGACTCAAT
AGCAGAGTTTATTTTTGTTCACAGTGGCAAGGTCCATGATTGTATGAGGTCCCTGCTCTGGCTA
TGCCTTCAGCTCCATCCACATTCAGGGGAAGAACCAATGAGGTGGACTGGCCAGCAGTGCCCCG
AGTAAGCCGAGTCGATGGTACAGAACAAAAATTGAGGGGAGGGGGGATCTGAAATTTGTTTTAC
TGAAAAAGCTTTGTGAACTAATTTTCTACAATTGATAAAATTTGGTGCCTTGTACTTGATTGTG
GTTTGCATGAGAGTTAAGGGGGAGGGCTCCTTTTTGTTGTGTCAAGTGGCAGATGGGTCTGTAG
TGTTTAAAGGATACGTGCTATCAGATTTTTAGAGCATTCCTTTCTTAGGTACGAATGTAAATTG
TTCTTACCAGCAAGTTCTAGAGTTTTAATGTCCAAATTGTATTTGTAATCAATCATTCCTCAAA
TGTCTGAATACCACTATTCGTTGCCCCTTGTACATGCCAAACGTTAATGTTGGACTTTTCTGGA
GGTGACCCTTTCCTGAATGTGTATCACATCCCTGTGCGGGATTGCAGCTTATGTGTGCAAGGGT
TTCCAGTTAGTTGGGAGAGCACAAATGATCAGAAAGCCTTTCTCTCGATCATGATGAAGCCGAG
GGACCAATGGCGGTAGTCTGCATTTACTCTGGAGTCCTGCGTGAACCATCAGGAAGCAGTGTTA
CAGTGATGCCCACGTGTGAGCCTTCAGACTGTAAGACAAGCCACCACCGTGTAGTAAGCAGTGA
ATCATCTAAATGACCCGTCTCCGCCACCTCGACACTTCCTGGGCAGATGACAAATGGGACAGTG
CTCCGTGGCTGAGGAAGGTATTGAGACTCCATTCAGTCAGGGCCAGTCTCAGCCAGTTCTTTCA
TTCCAACCTTGAAGTTTCTACTGAACTAGTGCAGCTTCACCCAAGTGCTCATGAACTTACCGTT
GGTTCGAGCATACTTGGTAACTGGGTCACTTGACTTCTTTATTAGCTAAGTGTGGGTCTGTCAG
TACTGAAGCTGGAAAGGCCTTAGGACGGTGAGCTTCCTCCCGTTCACATTCCGCTCTGCTCTCG
GTTCAGTCTGTCACTGACTACGCTATCCCCGTCAGCCCATGCACTCTGCGCCATGGCCCAGCAG
CTATGAAGCAAGCGGTCAGTTTGTGAGATCTGCCCGTGCTTGAACTGGCATCTTTCACTTACAA
AGAATTAGCCCTGGGAAAGGGCTCATGGCTAGAGCACTTGGCTCTCGCGGGCCGGGTCTCACCC
AGCTGCACTAAACCAGCTTAAATGAAAGAATGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAA
GGAAAAAAGAAGAAAAGAAAAGGTCATCTGGGGTTCTAAGTCTAACATACAGCTTACAAGCTTC
TTGGGCTCTGCAAGCAATGGCCTCAAGCCCAAGCCTCATCCTAGTATTCATACTCATGACCCTG
TCCACCCTGGGCCCATTTTTTTTTTTTAAAGCAGTCTCACTGTGTAGCCCTGGCTAACTTGGAA
CTTACTATGTAGAACAGGCTGGCAGTACAGAGCCATATGCATCCAGGATTAAGTGTGCGCCACC
AGGGCCTCAGCCTGTCTTCCTCCCAATGATCTCTAAAATAAACGTTTCAGAGCATCTGTAACCC
TAGGTAAATGCTAGGCCTGAGTTCATTCAGGGTGTTCCTCCTAGCTGTCCACCACATGGGCTCT
ATCTGATAAACATTCACGAGAACACGGTAATGCCCATCGAACACATGGCTAGGCATGTAGCTCA
GCAGAGCCCAGAGTTGGAGACCATCACCACATAAAGCCAGGCATAGTGCAGCCTTTAATCCTAA
CCTGTACCTGTCGTTCTAAGTGTTGGTCCATGCAAGCGGCAGGATAAGCAGTTCACAGCCACCC
TCAACCATGTAGTTATGTTTGAGGCCAGCCTGGGCTACAGACCCTGTCTCAAAAAGACAAAAAC
ACAAAAAAACTCTTTAATTGCCCCCACCCCCACCCCAATTATTTTGTGGCTCTGTGGAGGTCAA
ATTCAGAATTGAAGCCTTTTCTGCAATGAGCTAGGCCCCAGAGGACGACAGAATGAGACACAAG
CCAGCAGATCCAAGAAAGCTGCTTTGCCGTTTCCCTTAGTGAGCCGCCATAGGTAACATCTGTA
ATAGTCATGTAGCTGTGGCCCAGATCCACCAGCCCCTCCTCACTCACGCTCTGTAACCCACAAC
CAATTCAAACGGGCTGGAGCAGAAGAAGAAATTTTAAAACACCCAGTAAATTGACTAAGTGAAG
CTGTGGAGAGCCTGTCTCTCCCCGCCTGGTTTCCCACACAGGATGTCCGTGCTGCTTCTTACAC
GCTTGGAAGGACACCAGACGGCAGCACCAGCATGAGTCTCGGGGTAGGAAGCACCTTTCTTTGT
GACACATTTGCCTCCACCCACACATCACTGTCCTCTTCTGCCACCAAATCTCACTCTTCCAACA
ATGTCTCCCCGGTACCTGGAAAACCCACTGGCAAATTAAAACGCCAACCACCACCAACTTCGTC
CTCCAGGACTCAACAATAGGAACTGTCAAGCATCAGCTTTGTGGTGTGTCTGCATCCCTGAGGA
GTGGGGGTTCCAGTCCCATCTCATCTCCACTGCAGCTCCTGTTTGGGGCTCACTCCTGCCTCTT
GAGTGTGAAATACAAGTCATGTTTATTTGATTTTTGTAAACTGACTTTTTACACCTTGTTTTTG
TAAGAAATTTCTTATTAAAAGAATAAAACACC

hide sequence

RefSeq Acc Id:

XM_017596410 ⟹ XP_017451899

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	20,803,177 - 20,863,303 (-)	NCBI
mRatBN7.2	9	13,305,640 - 13,365,484 (-)	NCBI
Rnor_6.0	9	15,314,875 - 15,374,664 (-)	NCBI

Sequence:

show sequence

GACGATAAGAGGCGTGGTCCGCCCGCTCGTCTCGCGCCCCGGTGACAGCTCGCGCGTGCTGATG
ATGGCGGTAACAGAGAAGAGGCAAACCAGCCAGTGATTATGTGAGAATATGGAAGACGATGGGA
GCGGCTTGTTCAATGGATTAAGAAAGTGGCGACTGCGCTAAAACATGGATAGATGCAAACATGT
AGGGCGGTTACGGCTCGCCCAGGATCACTCCATCCTGAACCCCCAGAAGTGGTGCTGTCTGGAG
TGCGCCACCACCGAGTCTGCGTGGGCTTGCCTCAAGTGCTCCCACGTGGCTTGCGGCCGCTACA
TTGAAGACCATGCACTAAAACACTTTGAAGAGACCGGACACCCGCTGGCCATGGAGGTCCGGGA
TCTCTACGTGTTCTGCTACCTGTGCAAGGATTACGTGCTCAATGACAACCCCGAAGGGGACCTG
AAGTTGCTAAGAAGCTCCCTCCTGGCTGTTCGAGGCCAGAAGCAGGACCTGCCCGCGAGGCGTG
GGCGGACGCTGCGGTCCACAGCTGCAGGCGAGGACGTGGTCCCGCCGCAGCGTACTCCTCAGGG
ACAGCCGCAGATGCTCACGGCTCTGTGGTACCGGCGCCAGCGCTTGCTGGCCAAGACGCTGCGG
CTCTGGTTTGAGAAGAGCTCCCGCGGCCGTGCGCAGCTGGAGCAGCGGCGGCAGGAGGAGGCGC
TGGAGCGTAAGAAGGAGGCGGCGCGGCAGCGACGGCGCGAGGTCAAGAGGCGGCTGCTGGAGGA
GCTGGCCAGCGCGCCGCCGCGGAAGAGTGCGCGCCTGCTCCTGCACGCTCCCGGGCCCGTGGCC
GTGCGCCCTGCTACCCTCGCTACCTCCCGGCGCATGTCCGCTGCTGCCCTCAAGCCGCGCCGTC
AGCTGGCGGTGGCCCCGGGTGTTACTGGGCTGCGCAACCTGGGTAACACCTGCTACATGAACTC
CATCCTCCAGGTGCTCAGCCACCTCCAGAAGTTCCGGGAATGTTTCCTGAACCTCGACCCCTCC
ACCTCCGAGCACCTGTTTCCCCAAGCAACCAACGGGAAGGCTCAGATCCCTAGCAGGCCAGCCA
GCAGCACTGCCGCGGGGTTCTCAGTAAGGAGTGACCGGGCCCAGGGGTTCGAACCTCAGGGCTT
CTGCTGGAGCAGCGGAGCCTCCATCAGCAGGAGCCTAGAGCTCATTCAGAACAAGGAACCCAGC
TCAAAGCACATTTCTCTCTGCCACGAACTGCACACCCTCTTCCGAGTCATGTGGTCTGGGAAGT
GGGCGCTGGTATCACCCTTTGCCATGCTTCACTCCGTGTGGAGCCTGATTCCCGCCTTCCGAGG
CTACGATCAGCAGGATGCGCAGGAATTTCTCTGCGAACTGCTGCACAAGGTACAGCAGGAGCTT
GAGTCTGAGGGCTCCACACGCCGGATCCTCATCCCCTTCTCCCAGAGGAAGCTCACCAAGCAGG
TCTTAAAGGTGGTGAACACTATATTTCATGGGCAGCTGCTCAGTCAGGTCACATGTGTATCATG
CAATTATAAATCCAATACCATTGAGCCCTTTTGGGATCTATCCCTGGAATTTCCTGAACGATAC
CACTGCGTAGAGAAGGGGTTTGTCCCTTTGAATCAGACAGAGTGCCTGCTCACTGAAATGCTAG
CCAAGTTCACCGAGACAGAGGCCCTGGAGGGGAGAATCTACGCTTGTGACCAGTGTAACAGCAA
ACGACGAAAGTCCAACCCCAAACCCCTTGTTCTGAGTGAAGCTAGGAAGCAGTTAATGATCTAC
AGACTACCTCAGGTCCTCCGGCTACACCTTAAAAGATTCAGGTGGTCTGGCCGTAACCATCGTG
AGAAGATCGGGGTCCATGTCGTCTTTGATCAGGTGTTAACCATGGAACCTTACTGCTGCGGGGA
CATGCTCTCCTCCCTTGACAAAGACACCTTTGCCTATGACCTCTCCGCAGTGGTCATGCATCAC
GGGAAAGGGTTTGGCTCAGGACACTACACAGCCTATTGCTACAACACAGAGGGAGGTTTTTGGG
TCCACTGCAATGACTCAAAGCTGGATGTATGCAGTGTGGAGGAAGTGTGCAAAACCCAGGCCTA
CATTCTTTTTTACACTCGAAGAACAGTTCAGGGCAGCGCAAAACTCTCAGAACCCCATCTCCGA
GCTCAGGTGCACTCCAGCAGCAAGGACGATCGCAGAACATACACATTTCCCTGACTGGGAGGCA
AGCATCAAAATGGCCTCCAGCTCTCCTCTCGGGAAATAAGGCTTGCCACAGTAACAGATTCCTG
GGGTTGCCACACTGGGTCTAGGGGAGAAATGCCCTGTGATTCCTGCTCTGTCAAAAAATTGGTA
GTTACTTTCTTGTGAAACCATGCAAATCCCTCCTTTCATAAAAACAATCTAAAGGAGTAGCTTC
TATGAAGATTCTTTTGTCAGATGCTTCTGGAAAACAGGGACCTGGGTAGAGGAGACGGGGTAAG
CGATGAGCCAGCCATGAGAACAGTCATGTCTGTCTGTCATGAGTCCCCTATTCATCAGGCCCTC
CCCGAAGCACTGCACAGAGTACATGAGGGCCCCGGGCTGAGAGCTGGTGGCAAAGACTGGTCCC
AACACAGAAGGTGAAGTCACAGGAGTTATTCACTCTAAGAAGGTAACCATCAAGAGTCATAGCT
TGCAGACTTCATTTCTTAGGAGAGAACAGTTGAAGAGTGAGGGGCATGGAGCCCCTCCATGCCA
ACGGGAAGGCTGTCTGTCATAGCTTGTCTTCTCCTGAGCTGTTGTCACCTTGTCACTCCACATG
GTGAAGCTGAGACTTGAGCCATCCCTAAGGCAGTCAGGAGGACACATAGACCTGTGTGTGCATG
GTCTGTGTGAGCTAAGCCATGGACACTCCTGACTTCCCCAGTCCTGTAGCAAGGGCTGGGCTCA
GAGTCATGGCTTGGTTTGGATCGGTTTTTGTCAGTTGTCAGAAGCTTTCACAGAATGCAGTGAG
GGTGAGCTGGGCTTGTCTGAATGACTGCTGCCCCTAAGGCCTCACCTTATGTGACATGAAGGTT
CTCCCCTGCCCCTTGCTTCCCTGTGTGTGAGCAGTGCTTAGGGATCGGCTGTGTGGCTGCTGTG
GCCCTGGCCTGTTCTATCCCAGTGTGCTGTTCTTCACCCCTGCTGCTTTGGCCACAAGGAATAC
AGCAAGACTGTCTCTTACTCTGGAATCAGTAAAAACACATCTCTAAAGTCCACTCCGTCTCTGC
GGGAGGAGTGCTCAGAGCCTTCCTGTCAGGCACAGTAAGCTTCTTCCCCTTGGCAGTGGCGACT
GCGGTGCCCCACAGCCTCCCCTGCGAGTGCTGTCTTGATTACGTAGCTCGTGTTGATGTCTGCG
TTCAGGCAGAGCAGTTGTCACTTGGTGGGAGTTGTAGGGGTGGGGAACAGGATGGGGAGGCTGA
GGAGGCACCACCACACGTCCAGGCACATCTGTGGTGTTTACTGCTGCTCTCCTTTGAGGTGAGC
TCTCCTGTAGGCCTGCCAGACATCAGCAACACGGAAGAAATCAGACAGAAAGTGGCTCATCCTG
ACAGGGATGGCGTGCTGGATTTGAACTTGCTTTTTAATAACACTGTGAGGTTTCTGTAATATTT
AGCTTTTATTTGGAAGCGATAACGTAAGGCATTGTTGTGCTGTTTGGTTTTTACTGCCTATTTC
AGGCTTTTTTCTGAGCTTTGCTTGGGCTCCTCCTCTCCTGGGCACTGTTTTAGGGTGTCCCGGC
TGCCCACCCTGCCTGAGGTTCTGATGTAAAGCTGTACCCCTTCAGGGAGGTCTACATTGCTAAG
ATGGCTGATGGTGATGATTTGCTACCGTGGTAGGAAAGCCCATTCGAAATCAAAACCTGTGCTG
ACACACCCTGTAAGGCCAGCACTCGTTAGGCTGAGGCAGGGGGATCATGAATTCAAAGCTCCAT
TGTGAGGCCCTGTTTGAAAAGCAAAATCAACAAACTATAGAGAATAGAAAACAAAGGAAGTAAG
ACTGGACTGCACCTCACCTTAAACCTGTGTTGTTTTTTCTAGAAGGAGAACCTGTAGGCAGAGA
ACACAGACCTGCCTGTCTAGGGGGAACACATTAGAAGACTCTTACTCAGTTTTTAAAGATAGTT
TTATAGCAGCTATCAGCAGGACTGGTAAGCACATTAGGGACTTCATAAAGCTTAACTGCCCACC
CACCTATGAGATTAGTAAAATCGCTTAAAGTAAGTGGGAACTGAAACCAGCTTCTCCACTGAGC
CACCCTCAGGGAGGTGGACACCTAGCACTGGAAGCAGCAGCGTGAGGGAGGTAAGAGTGTGGTG
CTTAAGGAGACCTCTGCTGCAGAGGAGCTATAGGGTCCGGGCTGCTATGCTGCACTGTCCTCTG
CTCTGGTGCCTGCACAGCCAAAGCACAGCACTGTCAGCTGCATCACAGTGAAACATTCTAAAAA
GAAAGGACAGACAGATCTTGACTAGCTGACTCCAGGACAAACCCTAGTGCTGCTCTCCCAGCTG
CAGTCTCGGTCTGTGAACCCTTTGTAATTGGCTGGTGTGTTTACTTACTGCTGTAGCCAGCCAA
GACAAATATACCCCAGCCCTCAAAAATGACTTCTTACCTCAGTCTAGCCTGGCCCTCATGCTGT
GGTTGCCTCTCAGAGCAGGTACCATCACTAGTACCAAGACAGCAGGGACACCTTGGCACCCAGA
ACCGCAGCTCTCACCCCAGGGCAGGAGAGCTTTTAGATGTTGCTTGGAGCGTCAAGAATAAAAC
TGGAAACTGTGGAAGAGTTACTGTGTCCTATGGACTCAATAGCAGAGTTTATTTTTGTTCACAG
TGGCAAGGTCCATGATTGTATGAGGTCCCTGCTCTGGCTATGCCTTCAGCTCCATCCACATTCA
GGGGAAGAACCAATGAGGTGGACTGGCCAGCAGTGCCCCGAGTAAGCCGAGTCGATGGTACAGA
ACAAAAATTGAGGGGAGGGGGGATCTGAAATTTGTTTTACTGAAAAAGCTTTGTGAACTAATTT
TCTACAATTGATAAAATTTGGTGCCTTGTACTTGATTGTGGTTTGCATGAGAGTTAAGGGGGAG
GGCTCCTTTTTGTTGTGTCAAGTGGCAGATGGGTCTGTAGTGTTTAAAGGATACGTGCTATCAG
ATTTTTAGAGCATTCCTTTCTTAGGTACGAATGTAAATTGTTCTTACCAGCAAGTTCTAGAGTT
TTAATGTCCAAATTGTATTTGTAATCAATCATTCCTCAAATGTCTGAATACCACTATTCGTTGC
CCCTTGTACATGCCAAACGTTAATGTTGGACTTTTCTGGAGGTGACCCTTTCCTGAATGTGTAT
CACATCCCTGTGCGGGATTGCAGCTTATGTGTGCAAGGGTTTCCAGTTAGTTGGGAGAGCACAA
ATGATCAGAAAGCCTTTCTCTCGATCATGATGAAGCCGAGGGACCAATGGCGGTAGTCTGCATT
TACTCTGGAGTCCTGCGTGAACCATCAGGAAGCAGTGTTACAGTGATGCCCACGTGTGAGCCTT
CAGACTGTAAGACAAGCCACCACCGTGTAGTAAGCAGTGAATCATCTAAATGACCCGTCTCCGC
CACCTCGACACTTCCTGGGCAGATGACAAATGGGACAGTGCTCCGTGGCTGAGGAAGGTATTGA
GACTCCATTCAGTCAGGGCCAGTCTCAGCCAGTTCTTTCATTCCAACCTTGAAGTTTCTACTGA
ACTAGTGCAGCTTCACCCAAGTGCTCATGAACTTACCGTTGGTTCGAGCATACTTGGTAACTGG
GTCACTTGACTTCTTTATTAGCTAAGTGTGGGTCTGTCAGTACTGAAGCTGGAAAGGCCTTAGG
ACGGTGAGCTTCCTCCCGTTCACATTCCGCTCTGCTCTCGGTTCAGTCTGTCACTGACTACGCT
ATCCCCGTCAGCCCATGCACTCTGCGCCATGGCCCAGCAGCTATGAAGCAAGCGGTCAGTTTGT
GAGATCTGCCCGTGCTTGAACTGGCATCTTTCACTTACAAAGAATTAGCCCTGGGAAAGGGCTC
ATGGCTAGAGCACTTGGCTCTCGCGGGCCGGGTCTCACCCAGCTGCACTAAACCAGCTTAAATG
AAAGAATGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAGGAAAAAAGAAGAAAAGAAAAGGT
CATCTGGGGTTCTAAGTCTAACATACAGCTTACAAGCTTCTTGGGCTCTGCAAGCAATGGCCTC
AAGCCCAAGCCTCATCCTAGTATTCATACTCATGACCCTGTCCACCCTGGGCCCATTTTTTTTT
TTTAAAGCAGTCTCACTGTGTAGCCCTGGCTAACTTGGAACTTACTATGTAGAACAGGCTGGCA
GTACAGAGCCATATGCATCCAGGATTAAGTGTGCGCCACCAGGGCCTCAGCCTGTCTTCCTCCC
AATGATCTCTAAAATAAACGTTTCAGAGCATCTGTAACCCTAGGTAAATGCTAGGCCTGAGTTC
ATTCAGGGTGTTCCTCCTAGCTGTCCACCACATGGGCTCTATCTGATAAACATTCACGAGAACA
CGGTAATGCCCATCGAACACATGGCTAGGCATGTAGCTCAGCAGAGCCCAGAGTTGGAGACCAT
CACCACATAAAGCCAGGCATAGTGCAGCCTTTAATCCTAACCTGTACCTGTCGTTCTAAGTGTT
GGTCCATGCAAGCGGCAGGATAAGCAGTTCACAGCCACCCTCAACCATGTAGTTATGTTTGAGG
CCAGCCTGGGCTACAGACCCTGTCTCAAAAAGACAAAAACACAAAAAAACTCTTTAATTGCCCC
CACCCCCACCCCAATTATTTTGTGGCTCTGTGGAGGTCAAATTCAGAATTGAAGCCTTTTCTGC
AATGAGCTAGGCCCCAGAGGACGACAGAATGAGACACAAGCCAGCAGATCCAAGAAAGCTGCTT
TGCCGTTTCCCTTAGTGAGCCGCCATAGGTAACATCTGTAATAGTCATGTAGCTGTGGCCCAGA
TCCACCAGCCCCTCCTCACTCACGCTCTGTAACCCACAACCAATTCAAACGGGCTGGAGCAGAA
GAAGAAATTTTAAAACACCCAGTAAATTGACTAAGTGAAGCTGTGGAGAGCCTGTCTCTCCCCG
CCTGGTTTCCCACACAGGATGTCCGTGCTGCTTCTTACACGCTTGGAAGGACACCAGACGGCAG
CACCAGCATGAGTCTCGGGGTAGGAAGCACCTTTCTTTGTGACACATTTGCCTCCACCCACACA
TCACTGTCCTCTTCTGCCACCAAATCTCACTCTTCCAACAATGTCTCCCCGGTACCTGGAAAAC
CCACTGGCAAATTAAAACGCCAACCACCACCAACTTCGTCCTCCAGGACTCAACAATAGGAACT
GTCAAGCATCAGCTTTGTGGTGTGTCTGCATCCCTGAGGAGTGGGGGTTCCAGTCCCATCTCAT
CTCCACTGCAGCTCCTGTTTGGGGCTCACTCCTGCCTCTTGAGTGTGAAATACAAGTCATGTTT
ATTTGATTTTTGTAAACTGACTTTTTACACCTTGTTTTTGTAAGAAATTTCTTATTAAAAGAAT
AAAACACC

hide sequence

RefSeq Acc Id:

XM_017596411 ⟹ XP_017451900

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	20,803,177 - 20,862,630 (-)	NCBI
mRatBN7.2	9	13,305,640 - 13,365,041 (-)	NCBI
Rnor_6.0	9	15,314,875 - 15,374,185 (-)	NCBI

Sequence:

show sequence

AAGGCAGGCTGGGGCGGGGGTTTGCTATGAGATGAGGAGGATTAGGAGAGAAAGGGTTAGAAGC
CGGAGAGAGGAGTGAGGAAGAAACCCAGGCTGGCCCGGGGATGAGGTTAGGAAGCCCGGGGCTA
GGAAGAGGGATCCGGGGTCAGGGCTAGGAGCAGGGGTCTGGAAGACGCCAGGCTTGGCAGGTGG
GAGGTGTCGGGGTGAGAGGTGCCGGGGGCAGAAGAGTTGCAAGTGGAAGACAAGGAAGGAGCAG
AGCCGGGGTAGTAGTTGGGAGTAGAGGAGGGAGAGTGATTAAGAGCCAGACGTGACAAGGGTGT
GAACTAGTGCAGAGCTGGGATGAGCTGAAGGGCTGGGAGCCGCTGGGGTGGGATCGACAAGGTG
TGGGTCAGTAGCTGGTGAGGGGTGTAAATTCTGCAAAGTGAGGGAGACAGGAGACCTGGATCAC
AACCTGGTGGAATCAAGATTCGGAGCGTTAGTGGAAGGGCTAAGGGGAAGCAAGCTGAGAGATG
GGCGTTAATAGGACAGTTGTGAGAGAAAAAGGAAAAGGCTGAAAGGACGCTAGAAGCAGGCTGT
AAGGAATGATGGTGAGCTGGGACCGAGAAACTGGGGACTTGTTTATTGAAGAGGTTCAGCAAGG
TAATGATAGTCGAGTCAAAAGACTGGCTGAAAAGCAGCCCGAGGAGATGAGCAAGGAAGAGATG
GGCCCTGGGATTTAAAGGATGGAATGGGGAGAAGGGGGAGAGAAAGGAGATTAAGGGAAGCTAG
GGGAGTCCTGATGGGTGTAGAACTGGGGTGGGCTGCACAGGAGTGGGAACCGAATACTGCTTTG
CCCTGAGGTGCCCCAGAAGGTCTGGAAGGGGCAGGGCACAAACGCTATAGTAAAGAATCCAATG
TAGGGAGCCTTTGGTGCAGAAGATAAGGAACCATGGTAACAGAGAAGAGGCAAACCAGCCAGTG
ATTATGTGAGAATATGGAAGACGATGGGAGCGGCTTGTTCAATGGATTAAGAAAGTGGCGACTG
CGCTAAAACATGGATAGATGCAAACATGTAGGGCGGTTACGGCTCGCCCAGGATCACTCCATCC
TGAACCCCCAGAAGTGGTGCTGTCTGGAGTGCGCCACCACCGAGTCTGCGTGGGCTTGCCTCAA
GTGCTCCCACGTGGCTTGCGGCCGCTACATTGAAGACCATGCACTAAAACACTTTGAAGAGACC
GGACACCCGCTGGCCATGGAGGTCCGGGATCTCTACGTGTTCTGCTACCTGTGCAAGGATTACG
TGCTCAATGACAACCCCGAAGGGGACCTGAAGTTGCTAAGAAGCTCCCTCCTGGCTGTTCGAGG
CCAGAAGCAGGACCTGCCCGCGAGGCGTGGGCGGACGCTGCGGTCCACAGCTGCAGGCGAGGAC
GTGGTCCCGCCGCAGCGTACTCCTCAGGGACAGCCGCAGATGCTCACGGCTCTGTGGTACCGGC
GCCAGCGCTTGCTGGCCAAGACGCTGCGGCTCTGGTTTGAGAAGAGCTCCCGCGGCCGTGCGCA
GCTGGAGCAGCGGCGGCAGGAGGAGGCGCTGGAGCGTAAGAAGGAGGCGGCGCGGCAGCGACGG
CGCGAGGTCAAGAGGCGGCTGCTGGAGGAGCTGGCCAGCGCGCCGCCGCGGAAGAGTGCGCGCC
TGCTCCTGCACGCTCCCGGGCCCGTGGCCGTGCGCCCTGCTACCCTCGCTACCTCCCGGCGCAT
GTCCGCTGCTGCCCTCAAGCCGCGCCGTCAGCTGGCGGTGGCCCCGGGTGTTACTGGGCTGCGC
AACCTGGGTAACACCTGCTACATGAACTCCATCCTCCAGGTGCTCAGCCACCTCCAGAAGTTCC
GGGAATGTTTCCTGAACCTCGACCCCTCCACCTCCGAGCACCTGTTTCCCCAAGCAACCAACGG
GAAGGCTCAGATCCCTAGCAGGCCAGCCAGCAGCACTGCCGCGGGGTTCTCAGTAAGGAGTGAC
CGGGCCCAGGGGTTCGAACCTCAGGGCTTCTGCTGGAGCAGCGGAGCCTCCATCAGCAGGAGCC
TAGAGCTCATTCAGAACAAGGAACCCAGCTCAAAGCACATTTCTCTCTGCCACGAACTGCACAC
CCTCTTCCGAGTCATGTGGTCTGGGAAGTGGGCGCTGGTATCACCCTTTGCCATGCTTCACTCC
GTGTGGAGCCTGATTCCCGCCTTCCGAGGCTACGATCAGCAGGATGCGCAGGAATTTCTCTGCG
AACTGCTGCACAAGGTACAGCAGGAGCTTGAGTCTGAGGGCTCCACACGCCGGATCCTCATCCC
CTTCTCCCAGAGGAAGCTCACCAAGCAGGTCTTAAAGGTGGTGAACACTATATTTCATGGGCAG
CTGCTCAGTCAGGTCACATGTGTATCATGCAATTATAAATCCAATACCATTGAGCCCTTTTGGG
ATCTATCCCTGGAATTTCCTGAACGATACCACTGCGTAGAGAAGGGGTTTGTCCCTTTGAATCA
GACAGAGTGCCTGCTCACTGAAATGCTAGCCAAGTTCACCGAGACAGAGGCCCTGGAGGGGAGA
ATCTACGCTTGTGACCAGTGTAACAGCAAACGACGAAAGTCCAACCCCAAACCCCTTGTTCTGA
GTGAAGCTAGGAAGCAGTTAATGATCTACAGACTACCTCAGGTCCTCCGGCTACACCTTAAAAG
ATTCAGGTGGTCTGGCCGTAACCATCGTGAGAAGATCGGGGTCCATGTCGTCTTTGATCAGGTG
TTAACCATGGAACCTTACTGCTGCGGGGACATGCTCTCCTCCCTTGACAAAGACACCTTTGCCT
ATGACCTCTCCGCAGTGGTCATGCATCACGGGAAAGGGTTTGGCTCAGGACACTACACAGCCTA
TTGCTACAACACAGAGGGAGGTTTTTGGGTCCACTGCAATGACTCAAAGCTGGATGTATGCAGT
GTGGAGGAAGTGTGCAAAACCCAGGCCTACATTCTTTTTTACACTCGAAGAACAGTTCAGGGCA
GCGCAAAACTCTCAGAACCCCATCTCCGAGCTCAGGTGCACTCCAGCAGCAAGGACGATCGCAG
AACATACACATTTCCCTGACTGGGAGGCAAGCATCAAAATGGCCTCCAGCTCTCCTCTCGGGAA
ATAAGGCTTGCCACAGTAACAGATTCCTGGGGTTGCCACACTGGGTCTAGGGGAGAAATGCCCT
GTGATTCCTGCTCTGTCAAAAAATTGGTAGTTACTTTCTTGTGAAACCATGCAAATCCCTCCTT
TCATAAAAACAATCTAAAGGAGTAGCTTCTATGAAGATTCTTTTGTCAGATGCTTCTGGAAAAC
AGGGACCTGGGTAGAGGAGACGGGGTAAGCGATGAGCCAGCCATGAGAACAGTCATGTCTGTCT
GTCATGAGTCCCCTATTCATCAGGCCCTCCCCGAAGCACTGCACAGAGTACATGAGGGCCCCGG
GCTGAGAGCTGGTGGCAAAGACTGGTCCCAACACAGAAGGTGAAGTCACAGGAGTTATTCACTC
TAAGAAGGTAACCATCAAGAGTCATAGCTTGCAGACTTCATTTCTTAGGAGAGAACAGTTGAAG
AGTGAGGGGCATGGAGCCCCTCCATGCCAACGGGAAGGCTGTCTGTCATAGCTTGTCTTCTCCT
GAGCTGTTGTCACCTTGTCACTCCACATGGTGAAGCTGAGACTTGAGCCATCCCTAAGGCAGTC
AGGAGGACACATAGACCTGTGTGTGCATGGTCTGTGTGAGCTAAGCCATGGACACTCCTGACTT
CCCCAGTCCTGTAGCAAGGGCTGGGCTCAGAGTCATGGCTTGGTTTGGATCGGTTTTTGTCAGT
TGTCAGAAGCTTTCACAGAATGCAGTGAGGGTGAGCTGGGCTTGTCTGAATGACTGCTGCCCCT
AAGGCCTCACCTTATGTGACATGAAGGTTCTCCCCTGCCCCTTGCTTCCCTGTGTGTGAGCAGT
GCTTAGGGATCGGCTGTGTGGCTGCTGTGGCCCTGGCCTGTTCTATCCCAGTGTGCTGTTCTTC
ACCCCTGCTGCTTTGGCCACAAGGAATACAGCAAGACTGTCTCTTACTCTGGAATCAGTAAAAA
CACATCTCTAAAGTCCACTCCGTCTCTGCGGGAGGAGTGCTCAGAGCCTTCCTGTCAGGCACAG
TAAGCTTCTTCCCCTTGGCAGTGGCGACTGCGGTGCCCCACAGCCTCCCCTGCGAGTGCTGTCT
TGATTACGTAGCTCGTGTTGATGTCTGCGTTCAGGCAGAGCAGTTGTCACTTGGTGGGAGTTGT
AGGGGTGGGGAACAGGATGGGGAGGCTGAGGAGGCACCACCACACGTCCAGGCACATCTGTGGT
GTTTACTGCTGCTCTCCTTTGAGGTGAGCTCTCCTGTAGGCCTGCCAGACATCAGCAACACGGA
AGAAATCAGACAGAAAGTGGCTCATCCTGACAGGGATGGCGTGCTGGATTTGAACTTGCTTTTT
AATAACACTGTGAGGTTTCTGTAATATTTAGCTTTTATTTGGAAGCGATAACGTAAGGCATTGT
TGTGCTGTTTGGTTTTTACTGCCTATTTCAGGCTTTTTTCTGAGCTTTGCTTGGGCTCCTCCTC
TCCTGGGCACTGTTTTAGGGTGTCCCGGCTGCCCACCCTGCCTGAGGTTCTGATGTAAAGCTGT
ACCCCTTCAGGGAGGTCTACATTGCTAAGATGGCTGATGGTGATGATTTGCTACCGTGGTAGGA
AAGCCCATTCGAAATCAAAACCTGTGCTGACACACCCTGTAAGGCCAGCACTCGTTAGGCTGAG
GCAGGGGGATCATGAATTCAAAGCTCCATTGTGAGGCCCTGTTTGAAAAGCAAAATCAACAAAC
TATAGAGAATAGAAAACAAAGGAAGTAAGACTGGACTGCACCTCACCTTAAACCTGTGTTGTTT
TTTCTAGAAGGAGAACCTGTAGGCAGAGAACACAGACCTGCCTGTCTAGGGGGAACACATTAGA
AGACTCTTACTCAGTTTTTAAAGATAGTTTTATAGCAGCTATCAGCAGGACTGGTAAGCACATT
AGGGACTTCATAAAGCTTAACTGCCCACCCACCTATGAGATTAGTAAAATCGCTTAAAGTAAGT
GGGAACTGAAACCAGCTTCTCCACTGAGCCACCCTCAGGGAGGTGGACACCTAGCACTGGAAGC
AGCAGCGTGAGGGAGGTAAGAGTGTGGTGCTTAAGGAGACCTCTGCTGCAGAGGAGCTATAGGG
TCCGGGCTGCTATGCTGCACTGTCCTCTGCTCTGGTGCCTGCACAGCCAAAGCACAGCACTGTC
AGCTGCATCACAGTGAAACATTCTAAAAAGAAAGGACAGACAGATCTTGACTAGCTGACTCCAG
GACAAACCCTAGTGCTGCTCTCCCAGCTGCAGTCTCGGTCTGTGAACCCTTTGTAATTGGCTGG
TGTGTTTACTTACTGCTGTAGCCAGCCAAGACAAATATACCCCAGCCCTCAAAAATGACTTCTT
ACCTCAGTCTAGCCTGGCCCTCATGCTGTGGTTGCCTCTCAGAGCAGGTACCATCACTAGTACC
AAGACAGCAGGGACACCTTGGCACCCAGAACCGCAGCTCTCACCCCAGGGCAGGAGAGCTTTTA
GATGTTGCTTGGAGCGTCAAGAATAAAACTGGAAACTGTGGAAGAGTTACTGTGTCCTATGGAC
TCAATAGCAGAGTTTATTTTTGTTCACAGTGGCAAGGTCCATGATTGTATGAGGTCCCTGCTCT
GGCTATGCCTTCAGCTCCATCCACATTCAGGGGAAGAACCAATGAGGTGGACTGGCCAGCAGTG
CCCCGAGTAAGCCGAGTCGATGGTACAGAACAAAAATTGAGGGGAGGGGGGATCTGAAATTTGT
TTTACTGAAAAAGCTTTGTGAACTAATTTTCTACAATTGATAAAATTTGGTGCCTTGTACTTGA
TTGTGGTTTGCATGAGAGTTAAGGGGGAGGGCTCCTTTTTGTTGTGTCAAGTGGCAGATGGGTC
TGTAGTGTTTAAAGGATACGTGCTATCAGATTTTTAGAGCATTCCTTTCTTAGGTACGAATGTA
AATTGTTCTTACCAGCAAGTTCTAGAGTTTTAATGTCCAAATTGTATTTGTAATCAATCATTCC
TCAAATGTCTGAATACCACTATTCGTTGCCCCTTGTACATGCCAAACGTTAATGTTGGACTTTT
CTGGAGGTGACCCTTTCCTGAATGTGTATCACATCCCTGTGCGGGATTGCAGCTTATGTGTGCA
AGGGTTTCCAGTTAGTTGGGAGAGCACAAATGATCAGAAAGCCTTTCTCTCGATCATGATGAAG
CCGAGGGACCAATGGCGGTAGTCTGCATTTACTCTGGAGTCCTGCGTGAACCATCAGGAAGCAG
TGTTACAGTGATGCCCACGTGTGAGCCTTCAGACTGTAAGACAAGCCACCACCGTGTAGTAAGC
AGTGAATCATCTAAATGACCCGTCTCCGCCACCTCGACACTTCCTGGGCAGATGACAAATGGGA
CAGTGCTCCGTGGCTGAGGAAGGTATTGAGACTCCATTCAGTCAGGGCCAGTCTCAGCCAGTTC
TTTCATTCCAACCTTGAAGTTTCTACTGAACTAGTGCAGCTTCACCCAAGTGCTCATGAACTTA
CCGTTGGTTCGAGCATACTTGGTAACTGGGTCACTTGACTTCTTTATTAGCTAAGTGTGGGTCT
GTCAGTACTGAAGCTGGAAAGGCCTTAGGACGGTGAGCTTCCTCCCGTTCACATTCCGCTCTGC
TCTCGGTTCAGTCTGTCACTGACTACGCTATCCCCGTCAGCCCATGCACTCTGCGCCATGGCCC
AGCAGCTATGAAGCAAGCGGTCAGTTTGTGAGATCTGCCCGTGCTTGAACTGGCATCTTTCACT
TACAAAGAATTAGCCCTGGGAAAGGGCTCATGGCTAGAGCACTTGGCTCTCGCGGGCCGGGTCT
CACCCAGCTGCACTAAACCAGCTTAAATGAAAGAATGCCCTGGGTTCGGTCCCCAGCTCCGAAA
AAAAAGGAAAAAAGAAGAAAAGAAAAGGTCATCTGGGGTTCTAAGTCTAACATACAGCTTACAA
GCTTCTTGGGCTCTGCAAGCAATGGCCTCAAGCCCAAGCCTCATCCTAGTATTCATACTCATGA
CCCTGTCCACCCTGGGCCCATTTTTTTTTTTTAAAGCAGTCTCACTGTGTAGCCCTGGCTAACT
TGGAACTTACTATGTAGAACAGGCTGGCAGTACAGAGCCATATGCATCCAGGATTAAGTGTGCG
CCACCAGGGCCTCAGCCTGTCTTCCTCCCAATGATCTCTAAAATAAACGTTTCAGAGCATCTGT
AACCCTAGGTAAATGCTAGGCCTGAGTTCATTCAGGGTGTTCCTCCTAGCTGTCCACCACATGG
GCTCTATCTGATAAACATTCACGAGAACACGGTAATGCCCATCGAACACATGGCTAGGCATGTA
GCTCAGCAGAGCCCAGAGTTGGAGACCATCACCACATAAAGCCAGGCATAGTGCAGCCTTTAAT
CCTAACCTGTACCTGTCGTTCTAAGTGTTGGTCCATGCAAGCGGCAGGATAAGCAGTTCACAGC
CACCCTCAACCATGTAGTTATGTTTGAGGCCAGCCTGGGCTACAGACCCTGTCTCAAAAAGACA
AAAACACAAAAAAACTCTTTAATTGCCCCCACCCCCACCCCAATTATTTTGTGGCTCTGTGGAG
GTCAAATTCAGAATTGAAGCCTTTTCTGCAATGAGCTAGGCCCCAGAGGACGACAGAATGAGAC
ACAAGCCAGCAGATCCAAGAAAGCTGCTTTGCCGTTTCCCTTAGTGAGCCGCCATAGGTAACAT
CTGTAATAGTCATGTAGCTGTGGCCCAGATCCACCAGCCCCTCCTCACTCACGCTCTGTAACCC
ACAACCAATTCAAACGGGCTGGAGCAGAAGAAGAAATTTTAAAACACCCAGTAAATTGACTAAG
TGAAGCTGTGGAGAGCCTGTCTCTCCCCGCCTGGTTTCCCACACAGGATGTCCGTGCTGCTTCT
TACACGCTTGGAAGGACACCAGACGGCAGCACCAGCATGAGTCTCGGGGTAGGAAGCACCTTTC
TTTGTGACACATTTGCCTCCACCCACACATCACTGTCCTCTTCTGCCACCAAATCTCACTCTTC
CAACAATGTCTCCCCGGTACCTGGAAAACCCACTGGCAAATTAAAACGCCAACCACCACCAACT
TCGTCCTCCAGGACTCAACAATAGGAACTGTCAAGCATCAGCTTTGTGGTGTGTCTGCATCCCT
GAGGAGTGGGGGTTCCAGTCCCATCTCATCTCCACTGCAGCTCCTGTTTGGGGCTCACTCCTGC
CTCTTGAGTGTGAAATACAAGTCATGTTTATTTGATTTTTGTAAACTGACTTTTTACACCTTGT
TTTTGTAAGAAATTTCTTATTAAAAGAATAAAACACC

hide sequence

RefSeq Acc Id:

XM_039083485 ⟹ XP_038939413

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	20,803,177 - 20,862,751 (-)	NCBI
mRatBN7.2	9	13,305,640 - 13,365,194 (-)	NCBI

RefSeq Acc Id:

XM_063267083 ⟹ XP_063123153

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	20,803,177 - 20,867,681 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001129942	(Get FASTA)	NCBI Sequence Viewer
	XP_006244497	(Get FASTA)	NCBI Sequence Viewer
	XP_017451899	(Get FASTA)	NCBI Sequence Viewer
	XP_017451900	(Get FASTA)	NCBI Sequence Viewer
	XP_038939413	(Get FASTA)	NCBI Sequence Viewer
	XP_063123153	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM18893	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000018550
	ENSRNOP00000018550.5
	ENSRNOP00000105669.1

RefSeq Acc Id:

NP_001129942 ⟸ NM_001136470

- UniProtKB:

D3ZJ49 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGHP
LAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQKQDLPARRGRTLRSTAAGEDVVP
PQRTPQGQPQMLTALWYRRQRLLAKTLRLWFEKSSRGRAQLEQRRQEEALERKKEAARQRRREV
KRRLLEELASAPPRKSARLLLHAPGPVAVRPATLATSRRMSAAALKPRRQLAVAPGVTGLRNLG
NTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQIPSRPASSTAAGFSVRSDRAQ
GFEPQGFCWSSGASISRSLELIQNKEPSSKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWS
LIPAFRGYDQQDAQEFLCELLHKVQQELESEGSTRRILIPFSQRKLTKQVLKVVNTIFHGQLLS
QVTCVSCNYKSNTIEPFWDLSLEFPERYHCVEKGFVPLNQTECLLTEMLAKFTETEALEGRIYA
CDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQVLTM
EPYCCGDMLSSLDKDTFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEE
VCKTQAYILFYTRRTVQGSAKLSEPHLRAQVHSSSKDDRRTYTFP

hide sequence

RefSeq Acc Id:	XP_006244497 ⟸ XM_006244435
- Peptide Label:	isoform X1
- UniProtKB:	D3ZJ49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGHP LAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQKQDLPARRGRTLRSTAAGEDVVP PQRTPQGQPQMLTALWYRRQRLLAKTLRLWFEKSSRGRAQLEQRRQEEALERKKEAARQRRREV KRRLLEELASAPPRKSARLLLHAPGPVAVRPATLATSRRMSAAALKPRRQLAVAPGVTGLRNLG NTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQIPSRPASSTAAGFSVRSDRAQ GFEPQGFCWSSGASISRSLELIQNKEPSSKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWS LIPAFRGYDQQDAQEFLCELLHKVQQELESEGSTRRILIPFSQRKLTKQVLKVVNTIFHGQLLS QVTCVSCNYKSNTIEPFWDLSLEFPERYHCVEKGFVPLNQTECLLTEMLAKFTETEALEGRIYA CDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQVLTM EPYCCGDMLSSLDKDTFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEE VCKTQAYILFYTRRTVQGSAKLSEPHLRAQVHSSSKDDRRTYTFP hide sequence

RefSeq Acc Id:	XP_017451899 ⟸ XM_017596410
- Peptide Label:	isoform X1
- UniProtKB:	D3ZJ49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGHP LAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQKQDLPARRGRTLRSTAAGEDVVP PQRTPQGQPQMLTALWYRRQRLLAKTLRLWFEKSSRGRAQLEQRRQEEALERKKEAARQRRREV KRRLLEELASAPPRKSARLLLHAPGPVAVRPATLATSRRMSAAALKPRRQLAVAPGVTGLRNLG NTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQIPSRPASSTAAGFSVRSDRAQ GFEPQGFCWSSGASISRSLELIQNKEPSSKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWS LIPAFRGYDQQDAQEFLCELLHKVQQELESEGSTRRILIPFSQRKLTKQVLKVVNTIFHGQLLS QVTCVSCNYKSNTIEPFWDLSLEFPERYHCVEKGFVPLNQTECLLTEMLAKFTETEALEGRIYA CDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQVLTM EPYCCGDMLSSLDKDTFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEE VCKTQAYILFYTRRTVQGSAKLSEPHLRAQVHSSSKDDRRTYTFP hide sequence

RefSeq Acc Id:	XP_017451900 ⟸ XM_017596411
- Peptide Label:	isoform X1
- UniProtKB:	D3ZJ49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGHP LAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQKQDLPARRGRTLRSTAAGEDVVP PQRTPQGQPQMLTALWYRRQRLLAKTLRLWFEKSSRGRAQLEQRRQEEALERKKEAARQRRREV KRRLLEELASAPPRKSARLLLHAPGPVAVRPATLATSRRMSAAALKPRRQLAVAPGVTGLRNLG NTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQIPSRPASSTAAGFSVRSDRAQ GFEPQGFCWSSGASISRSLELIQNKEPSSKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWS LIPAFRGYDQQDAQEFLCELLHKVQQELESEGSTRRILIPFSQRKLTKQVLKVVNTIFHGQLLS QVTCVSCNYKSNTIEPFWDLSLEFPERYHCVEKGFVPLNQTECLLTEMLAKFTETEALEGRIYA CDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQVLTM EPYCCGDMLSSLDKDTFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEE VCKTQAYILFYTRRTVQGSAKLSEPHLRAQVHSSSKDDRRTYTFP hide sequence

Ensembl Acc Id:

ENSRNOP00000018550 ⟸ ENSRNOT00000018550

RefSeq Acc Id:	XP_038939413 ⟸ XM_039083485
- Peptide Label:	isoform X1
- UniProtKB:	D3ZJ49 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123153 ⟸ XM_063267083
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000105669 ⟸ ENSRNOT00000154159

Protein Domains

UBP-type USP

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZJ49-F1-model_v2	AlphaFold	D3ZJ49	1-685	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310513	AgrOrtholog
BioCyc Gene	G2FUF-28276	BioCyc
Ensembl Genes	ENSRNOG00000013866	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000018550	ENTREZGENE
	ENSRNOT00000018550.7	UniProtKB/TrEMBL
	ENSRNOT00000154159.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
	Cysteine proteinases	UniProtKB/TrEMBL
InterPro	Papain_like_cys_pep_sf	UniProtKB/TrEMBL
	Pept_C19ubi-hydrolase_C_CS	UniProtKB/TrEMBL
	Peptidase_C19	UniProtKB/TrEMBL
	Ub_carboxyl-term_hydrolase	UniProtKB/TrEMBL
	UCH/PAN2	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
	Znf_UBP	UniProtKB/TrEMBL
KEGG Report	rno:316211	UniProtKB/TrEMBL
NCBI Gene	316211	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 49	UniProtKB/TrEMBL
Pfam	UCH	UniProtKB/TrEMBL
	zf-UBP	UniProtKB/TrEMBL
PhenoGen	Usp49	PhenoGen
PROSITE	UCH_2_1	UniProtKB/TrEMBL
	UCH_2_2	UniProtKB/TrEMBL
	UCH_2_3	UniProtKB/TrEMBL
	ZF_UBP	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000013866	RatGTEx
SMART	ZnF_UBP	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
	SSF54001	UniProtKB/TrEMBL
UniProt	A0ABK0L6U3_RAT	UniProtKB/TrEMBL
	D3ZJ49	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Usp49	ubiquitin specific peptidase 49	Usp49_predicted	ubiquitin specific peptidase 49 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Usp49_predicted	ubiquitin specific peptidase 49 (predicted)	RGD1310513_predicted	similar to hypothetical protein MGC20741 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1310513_predicted	similar to hypothetical protein MGC20741 (predicted)	LOC316211_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316211_predicted	similar to hypothetical protein MGC20741 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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