Zdhhc13 (zDHHC palmitoyltransferase 13) - Rat Genome Database

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Gene: Zdhhc13 (zDHHC palmitoyltransferase 13) Rattus norvegicus
Analyze
Symbol: Zdhhc13
Name: zDHHC palmitoyltransferase 13 (Ensembl:zinc finger DHHC-type palmitoyltransferase 13)
RGD ID: 1309736
Description: Predicted to enable magnesium ion transmembrane transporter activity and palmitoyltransferase activity. Predicted to be involved in magnesium ion transmembrane transport. Predicted to be located in Golgi membrane; Golgi-associated vesicle membrane; and endoplasmic reticulum. Orthologous to human ZDHHC13 (zDHHC palmitoyltransferase 13); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC365252; MGC156470; palmitoyltransferase ZDHHC13; probable palmitoyltransferase ZDHHC13; zinc finger DHHC-type palmitoyltransferase 13; zinc finger, DHHC domain containing 13; zinc finger, DHHC-type containing 13
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81107,623,599 - 107,662,178 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1107,623,599 - 107,662,178 (+)EnsemblGRCr8
mRatBN7.2198,487,319 - 98,525,906 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl198,487,358 - 98,525,905 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1103,840,944 - 103,879,523 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01112,312,882 - 112,351,461 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01105,635,615 - 105,674,195 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1106,235,316 - 106,273,274 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1111,345,359 - 111,383,317 (+)NCBILyon_Normotensive
Lyon_Hypertensive1107,878,620 - 107,916,574 (+)NCBILyon_Hypertensive
F344_StmMcwi1106,334,725 - 106,372,683 (+)NCBIF344_StmMcwi
Rnor_6.01104,106,211 - 104,145,045 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1104,106,245 - 104,145,044 (+)Ensemblrn6Rnor6.0
Rnor_5.01105,165,487 - 105,204,299 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4198,560,384 - 98,599,521 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera192,695,837 - 92,733,742 (+)NCBICelera
RGSC_v3.1198,638,434 - 98,677,629 (+)NCBI
Cytogenetic Map1q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:12761501   PMID:16647879   PMID:18794299   PMID:19946888   PMID:25253725  


Genomics

Comparative Map Data
Zdhhc13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81107,623,599 - 107,662,178 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1107,623,599 - 107,662,178 (+)EnsemblGRCr8
mRatBN7.2198,487,319 - 98,525,906 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl198,487,358 - 98,525,905 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1103,840,944 - 103,879,523 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01112,312,882 - 112,351,461 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01105,635,615 - 105,674,195 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1106,235,316 - 106,273,274 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1111,345,359 - 111,383,317 (+)NCBILyon_Normotensive
Lyon_Hypertensive1107,878,620 - 107,916,574 (+)NCBILyon_Hypertensive
F344_StmMcwi1106,334,725 - 106,372,683 (+)NCBIF344_StmMcwi
Rnor_6.01104,106,211 - 104,145,045 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1104,106,245 - 104,145,044 (+)Ensemblrn6Rnor6.0
Rnor_5.01105,165,487 - 105,204,299 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4198,560,384 - 98,599,521 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera192,695,837 - 92,733,742 (+)NCBICelera
RGSC_v3.1198,638,434 - 98,677,629 (+)NCBI
Cytogenetic Map1q22NCBI
ZDHHC13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381119,117,104 - 19,176,415 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1119,117,099 - 19,177,712 (+)Ensemblhg38GRCh38
GRCh371119,138,715 - 19,197,962 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361119,095,268 - 19,154,543 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341119,095,267 - 19,154,542NCBI
Celera1119,271,160 - 19,330,447 (+)NCBICelera
Cytogenetic Map11p15.1NCBI
HuRef1118,822,638 - 18,881,941 (+)NCBIHuRef
CHM1_11119,138,047 - 19,197,312 (+)NCBICHM1_1
T2T-CHM13v2.01119,237,229 - 19,296,555 (+)NCBIT2T-CHM13v2.0
Zdhhc13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39748,438,751 - 48,477,188 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl748,438,751 - 48,477,188 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38748,788,998 - 48,827,440 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl748,789,003 - 48,827,440 (+)Ensemblmm10GRCm38
MGSCv37756,044,373 - 56,082,807 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36748,657,024 - 48,695,458 (+)NCBIMGSCv36mm8
Celera744,233,034 - 44,271,497 (+)NCBICelera
Cytogenetic Map7B4NCBI
cM Map731.11NCBI
Zdhhc13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955476105,347 - 154,615 (+)Ensembl
ChiLan1.0NW_004955476105,347 - 152,415 (+)NCBIChiLan1.0ChiLan1.0
ZDHHC13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2921,422,499 - 21,481,768 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11121,382,787 - 21,442,064 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01119,143,181 - 19,202,424 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11119,056,902 - 19,115,261 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1119,056,902 - 19,115,261 (+)EnsemblpanPan2panpan1.1
ZDHHC13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12141,243,214 - 41,292,458 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2141,243,294 - 41,291,995 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2140,722,004 - 40,770,985 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02142,366,308 - 42,415,748 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2142,366,308 - 42,415,753 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12141,369,039 - 41,418,062 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02141,546,343 - 41,595,627 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02141,923,675 - 41,972,648 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Zdhhc13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494743,659,203 - 43,706,223 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936654220,337 - 269,094 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936654220,391 - 267,383 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl240,251,246 - 40,310,455 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1240,251,511 - 40,310,455 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2243,317,076 - 43,353,151 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1145,819,877 - 45,873,302 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl145,820,339 - 45,854,299 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038143,154,568 - 143,210,976 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476610,556,645 - 10,608,083 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476610,556,715 - 10,608,070 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Zdhhc13
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12151,024,860 - 151,056,855 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zdhhc13
396 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:304
Count of miRNA genes:188
Interacting mature miRNAs:208
Transcripts:ENSRNOT00000019175
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)187889942132889942Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1102780511182384005Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)192963855109494029Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1101228864146228864Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)191302413136302413Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1102359314153680016Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)199645382182701046Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)192683681137683681Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)192683681137683681Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)197582336142582336Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1101594089146594089Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1100345976145345976Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)196717367160111531Rat

Markers in Region
RH131848  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2198,525,511 - 98,525,663 (+)MAPPERmRatBN7.2
Rnor_6.01104,144,651 - 104,144,802NCBIRnor6.0
Rnor_5.01105,203,905 - 105,204,056UniSTSRnor5.0
RGSC_v3.4198,599,127 - 98,599,278UniSTSRGSC3.4
Celera192,733,348 - 92,733,499UniSTS
RH 3.4 Map1923.79UniSTS
Cytogenetic Map1q22UniSTS
RH139123  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81107,654,995 - 107,655,130 (+)Marker Load Pipeline
mRatBN7.2198,518,723 - 98,518,858 (+)MAPPERmRatBN7.2
Rnor_6.01104,137,863 - 104,137,997NCBIRnor6.0
Rnor_5.01105,197,117 - 105,197,251UniSTSRnor5.0
RGSC_v3.4198,592,339 - 98,592,473UniSTSRGSC3.4
Celera192,726,560 - 92,726,694UniSTS
Cytogenetic Map1q22UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
10 16 12 150 249 91 90 65 139 59 22 485 331 11 228 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000019175   ⟹   ENSRNOP00000019175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1107,623,599 - 107,662,178 (+)Ensembl
mRatBN7.2 Ensembl198,487,358 - 98,525,897 (+)Ensembl
Rnor_6.0 Ensembl1104,106,245 - 104,145,044 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000081660   ⟹   ENSRNOP00000073740
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl198,493,601 - 98,525,905 (+)Ensembl
Rnor_6.0 Ensembl1104,106,293 - 104,144,617 (+)Ensembl
RefSeq Acc Id: NM_001395115   ⟹   NP_001382044
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81107,623,599 - 107,662,178 (+)NCBI
mRatBN7.2198,487,325 - 98,525,906 (+)NCBI
Dahl_SR_JrHsd1106,235,316 - 106,273,274 (+)NCBI
Lyon_Normotensive1111,345,359 - 111,383,317 (+)NCBI
Lyon_Hypertensive1107,878,620 - 107,916,574 (+)NCBI
F344_StmMcwi1106,334,725 - 106,372,683 (+)NCBI
RefSeq Acc Id: XM_039084990   ⟹   XP_038940918
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81107,623,613 - 107,662,178 (+)NCBI
mRatBN7.2198,487,319 - 98,525,906 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001382044 (Get FASTA)   NCBI Sequence Viewer  
  XP_038940918 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAX73391 (Get FASTA)   NCBI Sequence Viewer  
  EDM07232 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000019175
  ENSRNOP00000019175.4
Ensembl Acc Id: ENSRNOP00000073740   ⟸   ENSRNOT00000081660
Ensembl Acc Id: ENSRNOP00000019175   ⟸   ENSRNOT00000019175
RefSeq Acc Id: XP_038940918   ⟸   XM_039084990
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001382044   ⟸   NM_001395115
- UniProtKB: E9PU37 (UniProtKB/TrEMBL),   A6JBF2 (UniProtKB/TrEMBL)
Protein Domains
Palmitoyltransferase DHHC

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PU37-F1-model_v2 AlphaFold E9PU37 1-622 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690076
Promoter ID:EPDNEW_R599
Type:initiation region
Name:Zdhhc13_1
Description:zinc finger, DHHC-type containing 13
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01104,106,214 - 104,106,274EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309736 AgrOrtholog
BioCyc Gene G2FUF-59573 BioCyc
Ensembl Genes ENSRNOG00000014277 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019175 ENTREZGENE
  ENSRNOT00000019175.7 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Znf_DHHC_palmitoyltrfase UniProtKB/TrEMBL
NCBI Gene 365252 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  PTHR24161:SF16 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  zf-DHHC UniProtKB/TrEMBL
PhenoGen Zdhhc13 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  DHHC UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014277 RatGTEx
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A6JBF2 ENTREZGENE, UniProtKB/TrEMBL
  E9PU37 ENTREZGENE, UniProtKB/TrEMBL
  Q2TGJ6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2025-11-13 Zdhhc13  zDHHC palmitoyltransferase 13  Zdhhc13  zinc finger DHHC-type palmitoyltransferase 13  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2019-11-11 Zdhhc13  zinc finger DHHC-type palmitoyltransferase 13  Zdhhc13  zinc finger, DHHC-type containing 13  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-12-15 Zdhhc13  zinc finger, DHHC-type containing 13  Zdhhc13  zinc finger, DHHC domain containing 13  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 Zdhhc13  zinc finger, DHHC domain containing 13  Zdhhc13_predicted  zinc finger, DHHC domain containing 13 (predicted)  Symbol and Name status set to approved 1299863 APPROVED
2005-01-12 Zdhhc13_predicted  zinc finger, DHHC domain containing 13 (predicted)      Symbol and Name status set to approved 70820 APPROVED