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Gene: Apol2 (apolipoprotein L2) Rattus norvegicus

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Symbol:

Apol2

Name:

apolipoprotein L2

RGD ID:

1309591

Description:

Predicted to enable lipid binding activity. Predicted to be involved in lipid transport and lipoprotein metabolic process. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in schizophrenia. Orthologous to several human genes including APOL2 (apolipoprotein L2); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Apol8; apolipoprotein L 8; apolipoprotein L, 2; apolipoprotein L2-like; apolipoprotein L3-like; LOC100911804; LOC315111

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	APOL2 (apolipoprotein L2)	HGNC	Ensembl, HomoloGene, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Apol8 (apolipoprotein L 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LOC100982122 (apolipoprotein L2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LOC100156062 (apolipoprotein L3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	APOL2 (apolipoprotein L2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	APOL3 (apolipoprotein L3)	HGNC	EggNOG, Ensembl, Panther
Homo sapiens (human):	APOL4 (apolipoprotein L4)	HGNC	Ensembl, Panther
Homo sapiens (human):	APOL1 (apolipoprotein L1)	HGNC	Ensembl, Panther
Alliance orthologs ³
Homo sapiens (human):	APOL2 (apolipoprotein L2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Homo sapiens (human):	APOL2 (apolipoprotein L2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Homo sapiens (human):	APOL1 (apolipoprotein L1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Apol8 (apolipoprotein L 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Apol8 (apolipoprotein L 8)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:cabz01007802.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:cabz01007802.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	apol1 (apolipoprotein L, 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	apol1 (apolipoprotein L, 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	si:cabz01007807.1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:cabz01007807.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:rp71-1g18.13	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	F07F6.7	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER)
Caenorhabditis elegans (roundworm):	F07F6.8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	F07F6.8	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	LOC101730357	Alliance	DIOPT (Hieranoid\|InParanoid\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	111,211,944 - 111,219,209 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	111,211,893 - 111,217,223 (-)	Ensembl				GRCr8
mRatBN7.2	7	109,331,367 - 109,338,632 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,558 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	7	113,239,233 - 113,246,443 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	7	114,187,619 - 114,194,837 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	7	114,313,251 - 114,320,473 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	7	112,801,041 - 112,808,246 (-)	NCBI		F344_StmMcwi
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,728,617 - 118,732,738 (-)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,979,608 - 118,983,984 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	115,668,899 - 115,673,029 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	105,672,006 - 105,679,878 (-)	NCBI		Celera
RGSC_v3.1	7	115,703,128 - 115,711,697 (-)	NCBI
Cytogenetic Map	7	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cannabis abuse (ISO)

Cocaine-Related Disorders (ISO)

phencyclidine abuse (ISO)

Premature Aging (ISO)

schizophrenia (ISO)

substance abuse (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

17beta-estradiol (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,4'-trichlorobiphenyl (ISO)

2,4-dinitrotoluene (EXP)

2,6-dimethoxyphenol (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

actinomycin D (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

cisplatin (ISO)

clofibric acid (EXP)

cobalt dichloride (ISO)

cocaine (ISO)

drometrizole (ISO)

endosulfan (EXP)

ethylparaben (ISO)

etoposide (ISO)

furfural (ISO)

gentamycin (EXP)

ivermectin (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

Monobutylphthalate (EXP)

N-methyl-4-phenylpyridinium (EXP)

N-nitrosodiethylamine (EXP)

nefazodone (EXP)

nickel atom (ISO)

nickel dichloride (ISO)

nimesulide (EXP)

nitrofen (EXP)

Nutlin-3 (ISO)

okadaic acid (ISO)

oxybenzone (EXP)

paracetamol (EXP,ISO)

PCB138 (ISO)

perfluorooctanoic acid (ISO)

phencyclidine (ISO)

pirinixic acid (EXP)

potassium chromate (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

tributylstannane (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

lipid transport (IEA)

lipoprotein metabolic process (IEA)

Cellular Component

extracellular region (IEA)

Molecular Function

lipid binding (IBA,IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Transcriptional changes common to human cocaine, cannabis and phencyclidine abuse.	Lehrmann E, etal., PLoS One. 2006 Dec 27;1(1):e114. doi: 10.1371/journal.pone.0000114.
4.	Epigenetic aging is accelerated in alcohol use disorder and regulated by genetic variation in APOL2.	Luo A, etal., Neuropsychopharmacology. 2020 Jan;45(2):327-336. doi: 10.1038/s41386-019-0500-y. Epub 2019 Aug 29.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
7.	GOA pipeline	RGD automated data pipeline
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Comprehensive gene review and curation	RGD comprehensive gene curation

Genomics

Comparative Map Data

Apol2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	111,211,944 - 111,219,209 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	111,211,893 - 111,217,223 (-)	Ensembl				GRCr8
mRatBN7.2	7	109,331,367 - 109,338,632 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,558 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	7	113,239,233 - 113,246,443 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	7	114,187,619 - 114,194,837 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	7	114,313,251 - 114,320,473 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	7	112,801,041 - 112,808,246 (-)	NCBI		F344_StmMcwi
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,728,617 - 118,732,738 (-)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	7	118,979,608 - 118,983,984 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	115,668,899 - 115,673,029 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	105,672,006 - 105,679,878 (-)	NCBI		Celera
RGSC_v3.1	7	115,703,128 - 115,711,697 (-)	NCBI
Cytogenetic Map	7	q34	NCBI

APOL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	36,226,209 - 36,239,954 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	36,226,209 - 36,239,954 (-)	Ensembl			hg38	GRCh38
GRCh37	22	36,622,255 - 36,636,000 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	34,952,201 - 34,965,946 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	22	34,946,754 - 34,960,500	NCBI
Celera	22	20,424,825 - 20,438,568 (-)	NCBI		Celera
Cytogenetic Map	22	q12.3	NCBI
HuRef	22	19,590,366 - 19,604,109 (-)	NCBI		HuRef
CHM1_1	22	36,581,376 - 36,595,119 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	36,686,335 - 36,700,070 (-)	NCBI		T2T-CHM13v2.0

Apol8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	77,629,309 - 77,641,306 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	77,631,998 - 77,641,203 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	77,745,109 - 77,757,062 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	77,747,798 - 77,757,003 (-)	Ensembl			mm10	GRCm38
MGSCv37	15	77,579,043 - 77,585,659 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	77,575,052 - 77,582,522 (-)	NCBI		MGSCv36	mm8
Celera	15	79,215,063 - 79,221,679 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	36.79	NCBI

LOC100982122
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	46,111,536 - 46,125,016 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	48,803,106 - 48,816,584 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	17,172,486 - 17,186,260 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	35,011,137 - 35,024,913 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	35,011,137 - 35,024,913 (-)	Ensembl			panPan2	panpan1.1

LOC100156062
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	5	11,543,551 - 11,567,675 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	9,313,095 - 9,331,836 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

APOL2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	18,945,972 - 18,956,039 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666045	106,942,769 - 106,954,000 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in Apol2
28 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	160
Count of miRNA genes:	106
Interacting mature miRNAs:	113
Transcripts:	ENSRNOT00000074293, ENSRNOT00000075248
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	92388565	119280177	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	82111245	123048330	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	104186212	135371468	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	73618702	118618702	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	93302009	131686183	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	71621154	114982716	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	85043242	130043242	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	85497398	130497398	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1331723	Bw25	Body weight QTL 25	3.348		body mass (VT:0001259)	body weight (CMO:0000012)	7	96700404	111672180	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	83626689	128626689	Rat
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	82111382	132099989	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	98549867	137014596	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	77807807	122807807	Rat
631201	Panci1	Pancreas inflammation QTL 1	0	0.001	pancreas integrity trait (VT:0010560)	percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)	7	73557047	118557047	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	82111245	123048330	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	96700404	118618702	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
1331748	Bp215	Blood pressure QTL 215	4.043		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	110725024	135371468	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
10450862	Kidm55	Kidney mass QTL 55	4.9		kidney mass (VT:0002707)	kidney weight (CMO:0000081)	7	72725037	117725037	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	100548246	137014596	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	82111245	134948181	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	77807807	122807807	Rat
10450856	Livw4	Liver weight QTL 4	3.8		liver mass (VT:0003402)	liver weight (CMO:0000092)	7	72725037	117725037	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
10402855	Bp379	Blood pressure QTL 379		0.21	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	78682549	123682549	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	71621154	119349044	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat

Markers in Region

RH94614

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	109,344,893 - 109,345,018 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	118,992,427 - 118,992,551	NCBI	Rnor6.0
Rnor_6.0	7	118,741,181 - 118,741,305	NCBI	Rnor6.0
Rnor_5.0	7	118,988,103 - 118,988,227	UniSTS	Rnor5.0
Rnor_5.0	7	118,738,730 - 118,738,854	UniSTS	Rnor5.0
RGSC_v3.4	7	115,681,472 - 115,681,596	UniSTS	RGSC3.4
Celera	7	105,685,604 - 105,685,728	UniSTS
RH 3.4 Map	7	811.2	UniSTS
Cytogenetic Map	7	q34	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	exocrine system	hemolymphoid system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	sensory system	visual system
6	6	1	92	79	6	115	12	250	222	11	78	28	28	8	8

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001075828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_235465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000074293 ⟹ ENSRNOP00000067230

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,012 (-)	Ensembl
Rnor_6.0 Ensembl	7	118,728,617 - 118,732,738 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075248 ⟹ ENSRNOP00000066906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	111,211,893 - 111,217,223 (-)	Ensembl
mRatBN7.2 Ensembl	7	109,331,392 - 109,338,558 (-)	Ensembl
Rnor_6.0 Ensembl	7	118,979,608 - 118,983,984 (-)	Ensembl

RefSeq Acc Id:

NM_001432640 ⟹ NP_001419569

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	7	113,239,233 - 113,246,443 (-)	NCBI
Lyon_Normotensive	7	114,187,619 - 114,194,837 (-)	NCBI
Lyon_Hypertensive	7	114,313,251 - 114,320,473 (-)	NCBI
F344_StmMcwi	7	112,801,041 - 112,808,246 (-)	NCBI

RefSeq Acc Id:

XM_006241942 ⟹ XP_006242004

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,276 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,452 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

TAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACAC
CCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCAC
AGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAGT
CTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACT
TGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAG
GCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCC
CTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGT
GGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGC
ACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCAC
AGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGTC
AGTGCAAGGCTTTACTGAGGGGCCAAAGAATTGAGACTGGGGGCTTTCTTTGCATATGAACTTC
TCTGCCTGGGGGTGGGGAGTGAGTAGTCACCACTAAGACAAGAATAACAGAGCAAGAAGATTTT
ATCTGCTTATGAAAGGACAGAATATTGATGAACCTTCTGAGAAGACATTGAGAAACTCTCCTCC
TTGTTGCTCTTGCAGGAACTGGGGTTCTTGGTCCTGGCGGCTGGTAGGTGCCTTCCCAGAGCTC
CAGAGAGTTTGTTTTCTCCTCCTTGCAGCTTGGGGCAGAGATCCTGCATTTGACACCATGGACC
CTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCA
GCACACGTCGGGCAGGGACGACCTGAAGCTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTT
GTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTGATGCCCTCAATGCGCTCA
CAGCAAACATGGCTGAGGAAGACCAGAACAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTT
CATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTT
GCAGACAAGGTTGACAAGGTTCACAGGGACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCA
GTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAG
TCTGGTGCTCTTGGCAACAGGGATGGGTCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACG
GGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCA
GCATGGTTAAAGTGAAGATGGCTGCAGAGGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTT
ATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACC
AAAGCCAACCCTGCCTTAGCAGCTAGTGTCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCC
AAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCG
GATCATGGGCATAGCCACCGCAGGTGTGTCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAG
TCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGG
AGCTGGAGGAGAAATTGGAGGTGCTTGTCCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCA
GTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTT
GTCAAGGGACCAGGGTGCTCTTGAGGACCAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTG
GGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGACAGGTCAAGAGATTTTGT
AGCATGTCCAGGTCGGCCAGCCTGTGGTCATGAGACATACCTTTTCAGAGGCACAGCTTCCTCA
GGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCACCTCTCTGCTCATCTTCC
TCTGTTACCCTGTGTTCTATGTAGACTTTAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAA
CGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGT
TTAGGATGTGGGATTGGAGAGCATCCACCCTTATCCTAACCACCTAACAGCTAGATCCACAGCC
CCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTT
ATTCTGCTCATAGATCAGCACCAGAGGAATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGG
AAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGA
CCCTTTATGCTATTCTGTGTCTAAGACCACACCAGATCCTTCCTCTGGACCTTTATTGTGAACT
TGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTC
ATGTCGTGAGCTTTATTGTGCACACAGATTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACT
TGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_006241944 ⟹ XP_006242006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,177 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,598 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,176 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

GGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAGGCTTGAGGCCTGGAGTTCTG
GCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCCCTTAGAAGGAGCAAGCTGTC
TTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGTGGGTCGGGCTTTGCTTGATT
GCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGCACAGCTGGCCAGAAGCAGGG
CGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCACAGCCGCGTTAAGAGGTCCAC
TGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGTTTGTTTTCTCCTCCTTGCAGCT
TGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCA
GAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCT
GCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGAC
GCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACA
GGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGA
GCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGAC
TGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTG
GCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCT
GGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCA
GCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGG
CCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTG
CATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTC
AAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTA
AAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTC
CCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCA
AAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCC
AGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGAT
GAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCA
ATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTG
ACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCA
TGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGG
GTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTA
GCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGT
CATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCC
TTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGG
GGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAAT
CAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGA
AGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCAC
ACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAA
GAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATT
GAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAA
CTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_006241946 ⟹ XP_006242008

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,190 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,612 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,452 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

TAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACAC
CCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCAC
AGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAGT
CTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACT
TGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAG
GCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCC
CTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGT
GGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGC
ACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCAC
AGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGCTT
GGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAG
AACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCTG
CTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACG
CAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACAG
GCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAG
CTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGACT
GCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGG
CCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCTG
GGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAG
CCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGGC
CGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGC
ATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTCA
AGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAA
AGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTCC
CTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAA
AGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCCA
GATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATG
AGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCAA
TGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGA
CCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCAT
GAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGG
TGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTAG
CTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTC
ATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCCT
TATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGG
GTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAATC
AGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAA
GGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCACA
CCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAG
AGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATTG
AGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAAC
TACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_006241948 ⟹ XP_006242010

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,131 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,548 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,452 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI

Sequence:

show sequence

TAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACAC
CCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCAC
AGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAGT
CTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCACT
TGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCAG
GCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACCC
CTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGGT
GGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTGC
ACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCAC
AGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGAA
CTGGGGTTCTTGGTCCTGGCGGCTGTTTGTTTTCTCCTCCTTGCAGCTTGGGGCAGAGATCCTG
CATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAGCAGAACCTTCATTGAGGA
AGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAGCTGCTGCTGACTGAAGAT
GGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTGACGCAGACACTTTACGTG
ATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAACAGGCTCCAACATGACCT
GCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTGGAGCTGGAGAGACACGTC
AGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGGACTGCACCATTTCCAAGG
TGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCTTGGCCTCGCTCTGGTACC
TGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGTCTGGGAGCAGCAGCGGCT
GTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCATCAGCCCAAACAGAAGCCA
GCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGAGGCCGTGGTTTATTCAGG
ACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGGTGCATTGAGCAGAGCGTC
TATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTGTCAAGCGCCTCATGACCG
TGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTTTAAAGGCACTGCCCTGGC
AATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTGTCCCTCATTGGGGATGTG
ATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAGCAAAGTCTGCCGAGGAGT
TGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGTCCAGATCTATGACGGTTT
GCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTGATGAGTGGGGGTGATGAC
AGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGACCAATGAAATTCTATTGAC
TCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAGTGACCCAGATTGGACTGA
CAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGTCATGAGACATACCTTTTC
AGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGAGGGTGATGGACAAGACCA
CCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTTTAGCTCAAAGAATATTAG
CCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAAGTCATAGGAAAGGAAAAC
AAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCACCCTTATCCTAACCACCTA
ACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCAGGGGTAGAGCACAGCCTC
GTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGAATCAGGAGGTTAACACCA
GATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCAGAAGGTTGGGAGCAGATA
TGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACCACACCAGATCCTTCCTCT
GGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGAAAGAGGTCATGTGTACAG
AAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGATTGAGTTAATTATTACCA
AGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATAAACTACCTGGGGCAAGAT
CCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_017595249 ⟹ XP_017450738

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,518 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI

Sequence:

show sequence

CTAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACA
CCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCA
CAGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAG
TCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCAC
TTGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCA
GGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACC
CCTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGG
TGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTG
CACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCA
CAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGT
CAGTGCAAGGCTTTACTGAGGGGCCAAAGAATTGAGACTGGGGGCTTTCTTTGCATATGAACTT
CTCTGCCTGGGGGTGGGGAGTGAGTAGTCACCACTAAGACAAGAATAACAGAGCAAGAAGATTT
TATCTGCTTATGAAAGGACAGAATATTGATGAACCTTCTGAGAAGACATTGAGAAACTCTCCTC
CTTGTTGCTCTTGCAGGAACTGGGGTTCTTGGTCCTGGCGGCTGGTAGGTGCCTTCCCAGAGCT
CCAGAGAGGTGGGGAGAGCCAGACAAGTCTTGGTTAAGTTAACCCTGTGGTAGTTAACCCTGTA
ATGGAGTGCCTCGGTGTACCAAGTGTGCATGCAGAGCTGGGCAGGATTGGAAATGGCAGTGAAG
CTTGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGCAAG
CAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTGAAG
CTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAGCTG
ACGCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCAGAA
CAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAACTG
GAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACAGGG
ACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCTCCT
TGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATGGGT
CTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGTCAT
CAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGCAGA
GGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTACGG
TGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTAGTG
TCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGCCTT
TAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGTGTG
TCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAAAAG
CAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCTTGT
CCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTGGTG
ATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAGGAC
CAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGGGAG
TGACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGTGGT
CATGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGGGGA
GGGTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGACTT
TAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCCAAA
GTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATCCAC
CCTTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGTCCA
GGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGAGGA
ATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGCCCA
GAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAGACC
ACACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTATGA
AAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACACAGA
TTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAAATA
AACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

RefSeq Acc Id:

XM_039080557 ⟹ XP_038936485

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,518 (-)	NCBI

RefSeq Acc Id:

XM_039080558 ⟹ XP_038936486

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,518 (-)	NCBI

RefSeq Acc Id:

XM_063264681 ⟹ XP_063120751

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,095 (-)	NCBI

RefSeq Acc Id:

XM_235465 ⟹ XP_235465

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	111,211,944 - 111,219,209 (-)	NCBI
mRatBN7.2	7	109,331,367 - 109,338,632 (-)	NCBI
Rnor_6.0	7	118,727,658 - 118,735,453 (-)	NCBI
Rnor_5.0	7	118,725,207 - 118,732,485 (-)	NCBI
RGSC_v3.4	7	115,668,899 - 115,673,029 (-)	RGD

Sequence:

show sequence

CTAAATCCCCAACCCCCAGAACCTGTGTTTTCAACTGATGGACACATCGTTTGTGCTGCTGACA
CCCCAAAGGCCACTGCCCACCTGTGGGATGGGGTTGGCGTCTCTACAGTGGGAGGAAGGTGCCA
CAGCCACTGTGGGGAGATGAAGGGTCAGGAAGAATAGAAGTGTCTCACTGTGGAGTGTGAAAAG
TCTCACTAGAGGGTCAGTCACAGCAAAGACGTGGAGGTGTCACAGTCAGTGGGGCAGGATGCAC
TTGAAGGTGTATGATAGAATTGGATGGTTGGGAGGGAAGGAGGGAGGACAGAGGGGCTGCAGCA
GGCTTGAGGCCTGGAGTTCTGGCTAGAGGGGCTTCAACATGACCCTGAAAGGTCATCAGGGACC
CCTTAGAAGGAGCAAGCTGTCTTCACTTCCTCCCTCCCTACCCTGAGGATGCCCTGAGAAGGGG
TGGGTCGGGCTTTGCTTGATTGCTGGAGCTCCAGCTGGGAAGAAGAGGGTTCCTATCAGGGCTG
CACAGCTGGCCAGAAGCAGGGCGGGGTAGTCCTTCCTGGAACAGCCTTTCTATAAACCGAGTCA
CAGCCGCGTTAAGAGGTCCACTGTGCCCATATTAGCACCCGGCTACAGCAGCACGGGACCAGGA
ACTGGGGTTCTTGGTCCTGGCGGCTGGTAGGTGCCTTCCCAGAGCTCCAGAGAGGTGGGGAGAG
CCAGACAAGTCTTGGTTAAGTTAACCCTGTGGTAGTTAACCCTGTAATGGAGTGCCTCGGTGTA
CCAAGTGTGCATGCAGAGCTGGGCAGGATTGGAAATGGCAGTGAAGTTTGTTTTCTCCTCCTTG
CAGCTTGGGGCAGAGATCCTGCATTTGACACCATGGACCCTTCAGATGGCGAGGACTCTCCAGC
AAGCAGAACCTTCATTGAGGAAGCCACTGAGTATCTGCAGCACACGTCGGGCAGGGACGACCTG
AAGCTGCTGCTGACTGAAGATGGAGCCTGGGAGGCCTTTGTGGCTGAGGCTGAGTTGTCCAGAG
CTGACGCAGACACTTTACGTGATGCCCTCAATGCGCTCACAGCAAACATGGCTGAGGAAGACCA
GAACAGGCTCCAACATGACCTGCAGGATGTGGAGAGGTTCATAGATGTGTTTCCCCAGGTGAAA
CTGGAGCTGGAGAGACACGTCAGGAAGCTTCGCACCCTTGCAGACAAGGTTGACAAGGTTCACA
GGGACTGCACCATTTCCAAGGTGGTAGCTGGCTCTACCAGTACTGTGTCTGGAGTCCTGACCCT
CCTTGGCCTCGCTCTGGTACCTGTGACAGCTGGGGTCAGTCTGGTGCTCTTGGCAACAGGGATG
GGTCTGGGAGCAGCAGCGGCTGTGACTAGTGTCTCCACGGGTATCGTGGACTACACAAGTAAGT
CATCAGCCCAAACAGAAGCCAGCCACCTGGTGTCAACCAGCATGGTTAAAGTGAAGATGGCTGC
AGAGGCCGTGGTTTATTCAGGACCCCAAGTCTTTTCCTTATCTGAGAGTTGCTGCCGAGTCCTA
CGGTGCATTGAGCAGAGCGTCTATGCCATCAAGCTTACCAAAGCCAACCCTGCCTTAGCAGCTA
GTGTCAAGCGCCTCATGACCGTGGGAAGCATTTCTGCCCAAAGCGATAAGCATGTGAAGAAAGC
CTTTAAAGGCACTGCCCTGGCAATGAGCAGAAGAACCCGGATCATGGGCATAGCCACCGCAGGT
GTGTCCCTCATTGGGGATGTGATCAGCCTGGTGAAAGAGTCCAAGAATTTGTACAAGGGCGCAA
AAGCAAAGTCTGCCGAGGAGTTGAGGCAGCAGGCTCGGGAGCTGGAGGAGAAATTGGAGGTGCT
TGTCCAGATCTATGACGGTTTGCAGTCAGGCTCAACTCAGTCGTCCTAGATGACAGTGGTGGTG
GTGATGAGTGGGGGTGATGACAGAGTGGGCACAAGAGTTGTCAAGGGACCAGGGTGCTCTTGAG
GACCAATGAAATTCTATTGACTCTCTCTAGGGTGTGCTGGGATGGTGATTGATTTAGGGCTGGG
GAGTGACCCAGATTGGACTGACAGGTCAAGAGATTTTGTAGCATGTCCAGGTCGGCCAGCCTGT
GGTCATGAGACATACCTTTTCAGAGGCACAGCTTCCTCAGGAGACGGGGGAGGGGGATATTGGG
GGAGGGTGATGGACAAGACCACCTCTCTGCTCATCTTCCTCTGTTACCCTGTGTTCTATGTAGA
CTTTAGCTCAAAGAATATTAGCCAACTACTCTAGGAAAACGGGGCATCCCAGACTGAAGGTCCC
AAAGTCATAGGAAAGGAAAACAAGGCATTAGAGCAGGGTTTAGGATGTGGGATTGGAGAGCATC
CACCCTTATCCTAACCACCTAACAGCTAGATCCACAGCCCCTTCTGTGAGGCAATGTACTCGGT
CCAGGGGTAGAGCACAGCCTCGTAGGAGGCCCAGAGGTTATTCTGCTCATAGATCAGCACCAGA
GGAATCAGGAGGTTAACACCAGATTTATTCCTTCAAAGGAAGGGATGTACAACCTGTTATCTGC
CCAGAAGGTTGGGAGCAGATATGGTTAATAGTTTGGTGACCCTTTATGCTATTCTGTGTCTAAG
ACCACACCAGATCCTTCCTCTGGACCTTTATTGTGAACTTGTCCACCTATAGAACCCATCTTTA
TGAAAGAGGTCATGTGTACAGAAAGAGTTTGATGTAGTCATGTCGTGAGCTTTATTGTGCACAC
AGATTGAGTTAATTATTACCAAGAAAGTGTTGCCCAACTTGTGGTATGCTTCAATATGCCTAAA
ATAAACTACCTGGGGCAAGATCCCAGCAGTTTGAACCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001419569	(Get FASTA)	NCBI Sequence Viewer
	XP_006242004	(Get FASTA)	NCBI Sequence Viewer
	XP_006242006	(Get FASTA)	NCBI Sequence Viewer
	XP_006242008	(Get FASTA)	NCBI Sequence Viewer
	XP_006242010	(Get FASTA)	NCBI Sequence Viewer
	XP_017450738	(Get FASTA)	NCBI Sequence Viewer
	XP_038936485	(Get FASTA)	NCBI Sequence Viewer
	XP_038936486	(Get FASTA)	NCBI Sequence Viewer
	XP_063120751	(Get FASTA)	NCBI Sequence Viewer
	XP_235465	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM15907	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066906
	ENSRNOP00000066906.4

RefSeq Acc Id:	XP_235465 ⟸ XM_235465
- Peptide Label:	isoform X2
- UniProtKB:	M0RBH1 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MECLGVPSVHAELGRIGNGSEVCFLLLAAWGRDPAFDTMDPSDGEDSPASRTFIEEATEYLQHT SGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTANMAEEDQNRLQHDLQDVERFID VFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAGSTSTVSGVLTLLGLALVPVTAGVSLV LLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSE SCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSISAQSDKHVKKAFKGTALAMSRRTRIM GIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:

XP_006242008 ⟸ XM_006241946

- Peptide Label:

isoform X4

- Sequence:

show sequence

MDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALN
ALTANMAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAG
STSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLV
STSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSI
SAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQ
ARELEEKLEVLVQIYDGLQSGSTQSS

hide sequence

RefSeq Acc Id:	XP_006242006 ⟸ XM_006241944
- Peptide Label:	isoform X4
- UniProtKB:	M0RCB7 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALN ALTANMAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAG STSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLV STSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSI SAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQ ARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:	XP_006242010 ⟸ XM_006241948
- Peptide Label:	isoform X4
- UniProtKB:	M0RCB7 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPSDGEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALN ALTANMAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAG STSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLV STSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSI SAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQ ARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:	XP_006242004 ⟸ XM_006241942
- Peptide Label:	isoform X1
- UniProtKB:	A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGQNIDEPSEKTLRNSPPCCSCRNWGSWSWRLVGAFPELQRVCFLLLAAWGRDPAFDTMDPSD GEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRADADTLRDALNALTAN MAEEDQNRLQHDLQDVERFIDVFPQVKLELERHVRKLRTLADKVDKVHRDCTISKVVAGSTSTV SGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMV KVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKANPALAASVKRLMTVGSISAQSD KHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGAKAKSAEELRQQARELE EKLEVLVQIYDGLQSGSTQSS hide sequence

RefSeq Acc Id:	XP_017450738 ⟸ XM_017595249
- Peptide Label:	isoform X3
- UniProtKB:	A6HSG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MECLGVPSVHAELGRIGNGSEAWGRDPAFDTMDPSDGEDSPASRTFIEEATEYLQHTSGRDDLK LLLTEDGAWEAFVAEAELSRADADTLRDALNALTANMAEEDQNRLQHDLQDVERFIDVFPQVKL ELERHVRKLRTLADKVDKVHRDCTISKVVAGSTSTVSGVLTLLGLALVPVTAGVSLVLLATGMG LGAAAAVTSVSTGIVDYTSKSSAQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSESCCRVLR CIEQSVYAIKLTKANPALAASVKRLMTVGSISAQSDKHVKKAFKGTALAMSRRTRIMGIATAGV SLIGDVISLVKESKNLYKGAKAKSAEELRQQARELEEKLEVLVQIYDGLQSGSTQSS hide sequence

Ensembl Acc Id:

ENSRNOP00000067230 ⟸ ENSRNOT00000074293

RefSeq Acc Id:	XP_038936486 ⟸ XM_039080558
- Peptide Label:	isoform X4
- UniProtKB:	M0RCB7 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936485 ⟸ XM_039080557
- Peptide Label:	isoform X2
- UniProtKB:	M0RBH1 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000066906 ⟸ ENSRNOT00000075248

RefSeq Acc Id:	XP_063120751 ⟸ XM_063264681
- Peptide Label:	isoform X4
- UniProtKB:	M0RCB7 (UniProtKB/TrEMBL), A6HSG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

NP_001419569 ⟸ NM_001432640

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0RCB7-F1-model_v2	AlphaFold	M0RCB7	1-344	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309591	AgrOrtholog
BioCyc Gene	G2FUF-32867	BioCyc
Ensembl Genes	ENSRNOG00000048451	Ensembl
	ENSRNOG00000048970	Ensembl
	ENSRNOG00000070111	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075248	ENTREZGENE
	ENSRNOT00000075248.4	UniProtKB/TrEMBL
InterPro	ApoL	UniProtKB/TrEMBL
NCBI Gene	315111	ENTREZGENE
PANTHER	APOLIPOPROTEIN L 8	UniProtKB/TrEMBL
	PTHR14096	UniProtKB/TrEMBL
Pfam	ApoL	UniProtKB/TrEMBL
PhenoGen	Apol2	PhenoGen
RatGTEx	ENSRNOG00000048451	RatGTEx
	ENSRNOG00000048970	RatGTEx
	ENSRNOG00000070111	RatGTEx
UniProt	A6HSG5	ENTREZGENE, UniProtKB/TrEMBL
	M0RBH1	ENTREZGENE, UniProtKB/TrEMBL
	M0RCB7	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-03-29	Apol2	apolipoprotein L2	Apol2	apolipoprotein L, 2	Name changed	629549	APPROVED
2022-06-02	Apol2	apolipoprotein L, 2	Apol2	apolipoprotein L, 2	Data merged from RGD:149736259	737654	PROVISIONAL
2021-08-09	Apol2	apolipoprotein L, 2			Symbol and Name status set to provisional	45752	PROVISIONAL
2021-03-09	Apol2	apolipoprotein L, 2	LOC100911804	apolipoprotein L3-like	Data merged from RGD:6490440	737654	PROVISIONAL
2012-07-05	LOC100911804	apolipoprotein L3-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-09-25	Apol2	apolipoprotein L, 2	Apol8	apolipoprotein L 8	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-03	Apol8	apolipoprotein L 8	Apol2_predicted	apolipoprotein L, 2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Apol2_predicted	apolipoprotein L, 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM