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Gene: Zfp655 (zinc finger protein 655) Rattus norvegicus

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Symbol:

Zfp655

Name:

zinc finger protein 655

RGD ID:

1309158

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of G1/S transition of mitotic cell cycle and regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and nucleolus. Predicted to be active in nucleus. Orthologous to human ZNF655 (zinc finger protein 655); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC100910762; LOC103690102; LOC360764; MGC95009; RGD1309158; similar to RIKEN cDNA 2700038I16; vav-1 interacting Kruppel-like protein; zinc finger protein 205-like; zinc finger protein 655-like; Znf655

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF655 (zinc finger protein 655)	HGNC	Ensembl, HomoloGene, NCBI, Panther
Mus musculus (house mouse):	Zfp655 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF655 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF655 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101961779 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF655 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF655 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Znf655 (zinc finger protein 655)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ZNF655 (zinc finger protein 655)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp655 (zinc finger protein 655)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ZAP1	Alliance	DIOPT (Hieranoid\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	14,466,006 - 14,489,049 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	14,471,415 - 14,488,678 (-)	Ensembl				GRCr8
mRatBN7.2	12	9,349,985 - 9,375,449 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	9,357,639 - 9,374,569 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	10,163,386 - 10,180,047 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	10,786,583 - 10,803,244 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	9,810,011 - 9,826,672 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	11,122,779 - 11,146,182 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	11,806,834 - 11,808,977 (-)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	12	11,127,754 - 11,144,754 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	13,866,656 - 13,871,133 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	9,670,178 - 9,687,864 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	11,162,933 - 11,179,643 (-)	NCBI		Celera
RGSC_v3.1	12	9,700,105 - 9,717,792 (-)	NCBI
Cytogenetic Map	12	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

2-methoxyethanol (EXP)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

arsane (ISO)

arsenic atom (ISO)

benzene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

carmustine (ISO)

CGP 52608 (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

cyclophosphamide (EXP)

Dibutyl phosphate (ISO)

diethylstilbestrol (ISO)

dimethyl sulfoxide (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

ethyl methanesulfonate (ISO)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

geldanamycin (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

isoflurane (ISO)

lead diacetate (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

nickel atom (ISO)

ozone (ISO)

p-toluidine (EXP)

paracetamol (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

temozolomide (ISO)

tetrachloromethane (EXP,ISO)

thimerosal (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

negative regulation of G1/S transition of mitotic cell cycle (IEA,ISO,ISS)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

cytoplasm (IEA,ISO,ISS)

nucleolus (IEA,ISO,ISS)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA,ISO,ISS)

plasma membrane (IEA,ISO)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15558030

Genomics

Comparative Map Data

Zfp655
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	14,466,006 - 14,489,049 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	14,471,415 - 14,488,678 (-)	Ensembl				GRCr8
mRatBN7.2	12	9,349,985 - 9,375,449 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	9,357,639 - 9,374,569 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	10,163,386 - 10,180,047 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	10,786,583 - 10,803,244 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	9,810,011 - 9,826,672 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	11,122,779 - 11,146,182 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	11,806,834 - 11,808,977 (-)	Ensembl			rn6	Rnor6.0
Rnor_6.0 Ensembl	12	11,127,754 - 11,144,754 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	13,866,656 - 13,871,133 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	9,670,178 - 9,687,864 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	11,162,933 - 11,179,643 (-)	NCBI		Celera
RGSC_v3.1	12	9,700,105 - 9,717,792 (-)	NCBI
Cytogenetic Map	12	p11	NCBI

ZNF655
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	99,558,642 - 99,576,453 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	99,558,406 - 99,576,453 (+)	Ensembl			hg38	GRCh38
GRCh37	7	99,156,265 - 99,174,076 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	98,993,981 - 99,012,012 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	98,800,695 - 98,818,725	NCBI
Celera	7	93,890,274 - 93,908,309 (+)	NCBI		Celera
Cytogenetic Map	7	q22.1	NCBI
HuRef	7	93,793,044 - 93,810,988 (+)	NCBI		HuRef
CHM1_1	7	99,086,140 - 99,104,171 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	100,797,976 - 100,815,787 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	98,515,838 - 98,533,871 (+)	NCBI

Zfp655
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	145,168,503 - 145,184,116 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	145,168,525 - 145,213,723 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	145,231,595 - 145,247,306 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	145,231,715 - 145,247,302 (+)	Ensembl			mm10	GRCm38
MGSCv37	5	145,992,584 - 146,008,175 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	145,485,286 - 145,500,833 (+)	NCBI		MGSCv36	mm8
Celera	5	142,223,521 - 142,240,529 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	85.17	NCBI

ZNF655
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	117,415,978 - 117,433,768 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	165,680,613 - 165,698,403 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	91,531,547 - 91,549,581 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	105,033,053 - 105,051,724 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	105,033,721 - 105,051,724 (+)	Ensembl			panPan2	panpan1.1

ZNF655
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	9,978,125 - 9,994,715 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	9,982,293 - 9,993,404 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	11,603,997 - 11,620,801 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	9,978,085 - 9,994,891 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	9,978,088 - 9,994,642 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	9,841,451 - 9,858,256 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	9,826,317 - 9,843,105 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	10,060,716 - 10,077,515 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

LOC101961779
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	138,093,684 - 138,111,438 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936750	1,833,153 - 1,853,640 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936750	1,833,141 - 1,853,192 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF655
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	6,504,690 - 6,521,844 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	6,504,699 - 6,521,051 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	6,532,594 - 6,548,971 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF655
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	13,588,503 - 13,608,647 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	13,588,032 - 13,605,131 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666070	2,698,133 - 2,716,964 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf655
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	16	8,046,172 - 8,063,543 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfp655
83 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1240
Count of miRNA genes:	335
Interacting mature miRNAs:	468
Transcripts:	ENSRNOT00000001296
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312418	Kidm41	Kidney mass QTL 41	3.7	0.0001	kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	12	5921918	25247790	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
2306789	Ean6	Experimental allergic neuritis QTL 6	4.9		nervous system integrity trait (VT:0010566)	experimental autoimmune neuritis severity score (CMO:0001528)	12	1	29775522	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
1357337	Gluco3	Glucose level QTL 3		0.0004	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	12	1	16966671	Rat
5684888	Pia42	Pristane induced arthritis QTL 42			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	3489416	48489416	Rat
1331739	Hrtrt14	Heart rate QTL 14	3.56232		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	12	1	38687564	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
61331	Eau2	Experimental allergic uveoretinitis QTL 2		0.0005	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	12	1	33700600	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
1581516	Cm56	Cardiac mass QTL 56	4.2	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	11869600	16966542	Rat
61334	Gluco17	Glucose level QTL 17	6.3		adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)	12	1	16966671	Rat
2293684	Bmd26	Bone mineral density QTL 26	4.4	0.0002	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	12	1	38635130	Rat
6893681	Bw109	Body weight QTL 109	2.3	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28133365	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	12233000	30490641	Rat
1300174	Bw15	Body weight QTL 15	2.93		body mass (VT:0001259)	body weight loss (CMO:0001399)	12	1	28606299	Rat
1331787	Rf41	Renal function QTL 41	2.998		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	12	1	33700556	Rat
724526	Uae3	Urinary albumin excretion QTL 3	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	12	1	15486827	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
7204484	Bp358	Blood pressure QTL 358		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	1	24849755	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	41361854	Rat
1298081	Cia25	Collagen induced arthritis QTL 25	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	2747694	47747694	Rat
2303568	Bw88	Body weight QTL 88	3		body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28606299	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	3087180	48087180	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2293086	Iddm30	Insulin dependent diabetes mellitus QTL 30	3.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	7901625	33938215	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat

Markers in Region

BQ200996

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	9,368,374 - 9,368,525 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	11,138,616 - 11,138,766	NCBI	Rnor6.0
Rnor_5.0	12	13,207,831 - 13,207,981	UniSTS	Rnor5.0
RGSC_v3.4	12	9,681,726 - 9,681,876	UniSTS	RGSC3.4
Celera	12	11,173,505 - 11,173,655	UniSTS
RH 3.4 Map	12	120.1	UniSTS
Cytogenetic Map	12	p11	UniSTS

UniSTS:235362

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	9,358,854 - 9,359,057 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	11,805,716 - 11,805,918	NCBI	Rnor6.0
Rnor_6.0	12	11,128,973 - 11,129,175	NCBI	Rnor6.0
Rnor_5.0	12	13,198,790 - 13,198,992	UniSTS	Rnor5.0
Rnor_5.0	12	13,867,873 - 13,868,075	UniSTS	Rnor5.0
RGSC_v3.4	12	9,671,395 - 9,671,597	UniSTS	RGSC3.4
Celera	12	11,164,150 - 11,164,352	UniSTS
Cytogenetic Map	12	p11	UniSTS

Expression

RNA-SEQ Expression

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alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001008362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003751126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005491645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC136010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000071795 ⟹ ENSRNOP00000064091

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	14,471,415 - 14,486,625 (-)	Ensembl
mRatBN7.2 Ensembl	12	9,357,639 - 9,374,569 (-)	Ensembl
Rnor_6.0 Ensembl	12	11,806,834 - 11,808,977 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084637 ⟹ ENSRNOP00000072025

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	14,471,415 - 14,488,289 (-)	Ensembl
mRatBN7.2 Ensembl	12	9,357,639 - 9,374,513 (-)	Ensembl
Rnor_6.0 Ensembl	12	11,127,754 - 11,144,754 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105186 ⟹ ENSRNOP00000095143

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	14,481,972 - 14,488,377 (-)	Ensembl
mRatBN7.2 Ensembl	12	9,368,159 - 9,374,565 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115559 ⟹ ENSRNOP00000082698

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	14,475,787 - 14,488,678 (-)	Ensembl
mRatBN7.2 Ensembl	12	9,360,884 - 9,374,569 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116126 ⟹ ENSRNOP00000080958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	14,471,415 - 14,488,366 (-)	Ensembl
mRatBN7.2 Ensembl	12	9,357,639 - 9,371,531 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000128934 ⟹ ENSRNOP00000112588

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	14,483,128 - 14,488,678 (-)	Ensembl

RefSeq Acc Id:

NM_001008362 ⟹ NP_001008363

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,471,414 - 14,488,289 (-)	NCBI
mRatBN7.2	12	9,357,638 - 9,374,513 (-)	NCBI
Rnor_6.0	12	11,127,756 - 11,144,754 (-)	NCBI
Rnor_5.0	12	13,866,656 - 13,871,133 (-)	NCBI
RGSC_v3.4	12	9,670,178 - 9,687,864 (-)	RGD
Celera	12	11,162,933 - 11,179,643 (-)	RGD

Sequence:

show sequence

GGGACAGTCTCTAGGCCCGCCTCTCCACCTGGGGATGGAGGAAATAACATCCCAAGAAGCAGCA
GAATCACCAAGGGTCCAGTTTCAGTCTTTGGAGAGCCAGTCTGAATGTCTTTCCCCAGAGCTTC
GGTTTCTGCGGGACACAGAGATGGAGCAGGGATACACTGATGGATTTCCAATTTCCAAGCCTGA
TGGAATTTCTCAGCGGGAACAAGATCTACAAGTCTTTGATCTGGAAACTCAGAATAGAGAAGGC
GTAAGAAATGACTGTTCAGATGGAGAGACCAGAGAAGAAAACAAGCTGTTGATTCCTAAGCGGA
AAATTTCAGAAGAAGTACATTCATACAAAGTGAGAGTAGGAAAATTCAAACAAGATATTGCTCA
AGTTCCTGAGACCAGAGAGGCTTATAAGTCTGAGGACAGATTAGAAAGGCTCCAGGAGATTCTA
AGAAAATTTCTCTTTCTGGAGAGAGAGTTTAGACAAATAACAATCAGCAAGAAAACTTTCAGCA
ATGAGAAGAACACTGAACCTGAAAAAAGCTTCAGTCTAGACTCCACACTTGATACAGATCAAAG
AGTTCTTAGAATACAGACCATTGATGACAGTAAATATGACATGAACTTCAACCAGAACCCAGCT
GTTGGCGAACAAGAACCCATAAATCTAACAGAGAATTTTCAGAATACTGACTATAAGGAAAGCT
TAATGGATCTGTCCCACCTTAATAAATGGGAGAGCATGCCTACCACTGACAGATCCTATAAATG
TGATACATGTGGAAAAACCTTCCATCAGGCCTCAGCTCTTACTAGACATCAGAGAATCCACACA
AGAGAGAAACCCTACAAATGTAAGGAATGTGAGAAATCTTTTAGTCAGAGCTCAAGTCTTAGTC
GACATAAAAGAATACACACTAGAGAGAAATCCTACAGATGTGAAGCATCTGATAAATCTTGTGA
TGCCTCTGATAAGTCTTGTAGCCAGAGCTCAGATGTGCTTCAGCATAAGAAGGTTCATGCCAAA
GCCAAGTCTTACAAGTGTGGGACCTGTGAAAGAGTCTTCAGCCGAAGTGTGCATCTTACTCAGC
ATCAGAGAACACATAAGGACACGGCCTGTAAATGCACTGTGTGTGGCAGTGACTTCTGCCACAC
CTCATACTTAGTTGAACATCAGAGACTACATCATCAAGAGAAGTCCTATGAATATGATGAATGT
GGGCTGGCCTATGTTAAACAGCAAGGAATTCGTTTCCGAGAAAAGCCCTACTCGTGTAATGAAT
GTGGGAAAGACTTTAGATTGAATTCCCATCTTGTTCAGCATCAAAGAATTCACACAGGAGAAAA
ACTGCATGAATGTAATGAGCGTGGGAAAGCTTTCAGCCAGACCTCCTGCCTTAGTCAGCATCAT
AAAATGCACAGGAAAGAGAAATCATACGAATACAACAATTATGAGGAAAGTTTCAGTCACAATT
CTGATCTTACTCTGCAACAAGAAGTTCCCATTAGAGAGAGAGTCTTTGATTGTGATGCATGGGA
AGAGAACTTCAGTCAGAGAGCGCACCTCATCCCACATGAAAGGGCGCATACCAAAGAGAAACCT
TATGAATGCAATGAACTTGGGGAGACGTTTAGTCAAGTTCAGGCCTCATTCAATATGTGAGAAC
TGAGACCAGGGGAAGTCACATATGTACTGAATGTGATAATGTCTTCAGTCATAGCTTAGCCCTT
GGTCAGTATCAGAGAATTAATACCAGAGAGAAACCCGCTGAATGTGATGAATATTGGGAAGTTT
TTTTGGTGTTAAATTCTTCATTGGCTCCTGTAAATCAGTGCTAGAATATATAGACTATGGTACA
TTCTTCAGATTATTTTCATACCTTAGTCACAGTTGGGGAATTTGTACTGGAGTAAAATTCCACT
GTCAAATGTGAAAAAGCCATCAGTCAACTACCTTGTTGGTTCAGTGTCAAATTTGTGCCATGCA
TAAAGCCTGTGAGGATATAGGTGTGTATGTGAGGAAACTCAAGTCATACCCCAGTGCTTGCTCA
CATTGAAGAATCTAAACCCTTGAACAGTCTATACCCAAGAAGTCATTTGGGTGTAGTAAATGTG
GCATATCTGTGAGCACGGGTCCATCTATTGTCAGAATGTACCAGATGTGAATCTGGATATGATG
TAAATGCTAAGATCAGAACATCTGCACCAGATGAGACTGATAGAATGCAAACAGTGAAATTTAA
CCACTGTATTTTCAGGCCTTATCCAGTATCTCAAAGTATTAGAAAATGGTTACTGCTCTGTATA
ATTATTCCTATTTAGTCTCAGTCTTTTTACTGCAGAATAACTGAACCCAGAAGATAATTGGTGA
ACGAAGTCATTTTCTCACAGTATCCTTTAATAAGTATTCTAAGTAGGTACGAGTATTTTATTTA
CAGGACTCCTTTGAGTGGATTTATTTTAATTCGGCCTACATACATTAAAACACTTCTTTTCTTT
GAAATCGATTCTTGTTCACAGTTTACGTAGGATGCTGCTAATGCGCTGTGCTCACTTAGCTTCT
GGAGAGGAGCTCAATGAGCCTTCTCTGTTCTTGGCCTGAGTGCTCTCCAAAGGAGACTCAGCCT
ATTCTTTTCTGAGGACCCTACATGTTACTGTTTCTGTAGCCACACCTTGGGCTTCCAGTTGATT
TCTGCATTCTCCTTGGCAGCCTTAAATGGTGTTCTGGTTGTTAGCTTCTCACCAGCTGATAAAG
ACTTACTTCTACATCAGCCATCCATAAGTTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGG
CACCCAAACACTTGCAAGTGATGTCCAATTTTTAGCTTGTTTGCATCCACAGCCCTTTAAATGA
GATGACAAGGACATCAGGGAGCCAGTAAGACTTATGTTGGCCTAGCTACATTTCATTCAGTGCC
TACTTTGCATGTATGTGTATGTTTAGAATTCTTTTATATGCCTATATTGAAGGCCAACAAAATG
CTCAGGTCTGCTTTTGATAGGGAAACAAAGAACACACAAATCAGAATAAGGAAATAGAGCCTTC
CAATGAAGATGTTGCTGTTAGTGATGTATCTAGACAGTATTTCAAGAGCGTGGCAGGTCCGTTC
CTGGTCAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCCCTCTACTCCCTTCATCAAG
CCAGGGTAGTATTTTGAAGTGTAGACCTTTGTGCATAATTGTTTGTGCACTGCCATACTTTTGT
GTTGGGATGCAGCCTTTGCCGCCCAGGCTGGCCTTGAATTCCTGGGTTCACACAAATTTCCTGC
CTCCCAAGTAGCTGGGATTATAGGCATGCGCTCCTGTGCCTGGATTTTATTTTTGTATTTTAAT
AGCATCTGCAGGCCATTTAAAGGATCATGTCTATTTTGATTTATAGAAGTGATCACAGGTGTTG
AGTTCAGTGCCCTATATACTACATAGAGTTCATGATTCTTTACATGATGTCAAAGCATTTGTTT
TCATCTTAAAATAACATCTTGTGAATAAGAAAAGTGTTATTTAAAATTCTAGTTGTCAATCAAG
CAGTTGAGGCTTTCATAGTTCAGATGTCATAATGTTCACTAGGGATCCTCAACCAATATATAAA
ATATGCTGCTCACTCTGTAAACCTTGTGGCTAACCTAGGATAGGGATAGTCCTACCACTGTATT
TTACTTCTTTGCCATCAGCAAGCATAGTGTCTCATCAGGGCAAGAAAATTAACATATATCAAAT
TGATCTAAATGTAAAAGCAAATGAAAAATGCATGTTTTTCTGTCCCTGTCAAACATGTATACTC
TTACTTTATAGCGACCAATAGTCACTTCTGGTGACTGAGGCAGAGGATTTGATTCATCCCTAAG
TAGCAGAATCTGTAAAAATCACATGTATGCATTTGGGTTAGGAACGTGCTTTTGTATTTCTACT
TGAATAAAGGTGTGTTCAGCGCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_003751126 ⟹ XP_003751174

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,481,933 - 14,488,961 (-)	NCBI
mRatBN7.2	12	9,368,157 - 9,375,443 (-)	NCBI
Rnor_6.0	12	11,139,438 - 11,146,182 (-)	NCBI

Sequence:

show sequence

GTGTTGGTTGATGTATCTGGAGTTACAGGTGGTTGTGAGCCAACATGGGACCTGAGCTCGGATC
CTCTGTAAGAAGTTAGGGCTTTTACTTGCTAAGCCATTTCTCCAAGCCAAATAATTTTTTTGTA
TGTGCTATCCTTTGACTGAATGCATATCTGTGCATCCGGAGTGGGCAACATCTCCCGTGTCCTC
TGGAACTGAGGGACAAGGTTGTTAGCCACAGTATGAGTTCTAGGAACTAAGTGAAGCTTTGTAT
TCTGCACGAGCAACAGTGCTCTTCAATACTGAGCCATGTTTTCAGCCCCTGGGCAGTATTTTAA
AATGCTCGATTTATGAAGCGGTTGTTCTTCCTAATACTAGATAGTTATAAGATTATAGATTACA
AGATTCTGGGCTTCACTGGTTTCCGGGGAAAAAAATAATAAAACTATGGTAGCCTTAGCTTTGC
ACCTACTATTGCAAAAATGGTTGAGATAATCAACCGAGAGGAAATTTTTGTATCGTTTCACACA
ATTCACAGTTAAACTTGCTCCTTTTGTGCCTACAGTGAGGCTGCACACAGAGGAGAATTTTTGC
CCACCTCATGGTGGGCAGGTTCAAGCAAACATGAAGGGAAGAAAGGATGGGAATCAAAGCACGG
CCTGGCAGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCT
GGCAGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGC
AGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGG
AATGTCTTGGTGACTTTGGGCGAATCCTCTTGGGGAAAATGTGTATGTCCCTTCCAGATAGGGC
AAAACCTAGTACGTCCCTTTCTGTGGGCTATTTGGGGTCAGGCACTTCCCTAGGAAAAATAAGG
CCCGCCCAAATCAGTATTGGGTACAAGGGTCGTAAGGGACCAAGGAGGAGTCATTAGTAGTATT
TCCTATTCTGCCTAGGAATCCTCGTTCACGCTCCTGCGGCCTATGTCAAGGGTCTTCTAGTGCC
CGAGAAAAATCTAGGGCTCTTTCTCAACTTCTGCCGCCCTCTTGGTATAAGATGCACGCCAATC
AGCAGGGAGGGCCGTGCGACCTCGGAAAAGCCAAGCAAAACAGTAAGCAAGGCCTTGTCTAGTT
ATTCTGAGGCCCCGGGCTACGAATCCTCATCCCGTGTTAATCATCTGCTCGACCCCAGACACCC
TCACCCCTGCTCTTCATCCGGGAACCTCACCTAGGACCGTCCTCCCGCGGACTTCCGTCGCCGG
AAGTGACGTAAAGCGCCAGCCTTCTGGCAATCGAGAGTGGCCCCGGAAAGGCTGGTGAGACTCA
GCGAGGAGCGTCTCCGTGACGGGACAGTCTCTAGGCCCGCCTCTCCACCTGGTGATGGTCATTG
TCTCCCTGAACAGGGATGGAGGAAATAACATCCCAAGAAGCAGCAGAATCACCAAGGGTCCAGT
TTCAGTCTTTGGAGAGCCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCGGGACACAGA
GATGGAGCAGGGATACACTGATGCTCCACCTGTTCCCCAGGTGCCTGCCCTTCCCCATGAGGGA
AGCCCAGGAGACCAGGCAGCTGCGCTCCTGACAGCCAGGTACCAGGAGTTTGTGACATTCGAGG
ATGTGGCTGTGCATCTTACTCGAGAGGAGTGGGGATGCCTGGACCCTGTTCAGAGGGAGCTCTA
CAGAGAAGTGATGTTAGAGAATTATGGAAACGTGGTTTCACTGGGCATACTTCTCCGCCTTCCC
ACCACCCGGATTCATTGTGTGAATTCCTGCCCAGCCCTGAGTCATACCCAGGCAAGTGCTTTCT
CTGGAGAAACACTTGCAGTCCTTACAGCAGGAATCACCAAGAGATGGCCCAGGTATCGACTTTC
CATCGGGAGTGCTTGTCCCAGCACGGAAACTCCTTTTCCAAGATTGTAA

hide sequence

RefSeq Acc Id:

XM_006248895 ⟹ XP_006248957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,415 (-)	NCBI
mRatBN7.2	12	9,355,040 - 9,374,629 (-)	NCBI
Rnor_6.0	12	11,126,622 - 11,146,147 (-)	NCBI

Sequence:

show sequence

TGAGCCAACATGGGACCTGAGCTCGGATCCTCTGTAAGAAGTTAGGGCTTTTACTTGCTAAGCC
ATTTCTCCAAGCCAAATAATTTTTTTGTATGTGCTATCCTTTGACTGAATGCATATCTGTGCAT
CCGGAGTGGGCAACATCTCCCGTGTCCTCTGGAACTGAGGGACAAGGTTGTTAGCCACAGTATG
AGTTCTAGGAACTAAGTGAAGCTTTGTATTCTGCACGAGCAACAGTGCTCTTCAATACTGAGCC
ATGTTTTCAGCCCCTGGGCAGTATTTTAAAATGCTCGATTTATGAAGCGGTTGTTCTTCCTAAT
ACTAGATAGTTATAAGATTATAGATTACAAGATTCTGGGCTTCACTGGTTTCCGGGGAAAAAAA
TAATAAAACTATGGTAGCCTTAGCTTTGCACCTACTATTGCAAAAATGGTTGAGATAATCAACC
GAGAGGAAATTTTTGTATCGTTTCACACAATTCACAGTTAAACTTGCTCCTTTTGTGCCTACAG
TGAGGCTGCACACAGAGGAGAATTTTTGCCCACCTCATGGTGGGCAGGTTCAAGCAAACATGAA
GGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGGAAGGG
AAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGGAAGGGAAG
AAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAA
GGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGCGAATCCTCTTGGGG
AAAATGTGTATGTCCCTTCCAGATAGGGCAAAACCTAGTACGTCCCTTTCTGTGGGCTATTTGG
GGTCAGGCACTTCCCTAGGAAAAATAAGGCCCGCCCAAATCAGTATTGGGTACAAGGGTCGTAA
GGGACCAAGGAGGAGTCATTAGTAGTATTTCCTATTCTGCCTAGGAATCCTCGTTCACGCTCCT
GCGGCCTATGTCAAGGGTCTTCTAGTGCCCGAGAAAAATCTAGGGCTCTTTCTCAACTTCTGCC
GCCCTCTTGGTATAAGATGCACGCCAATCAGCAGGGAGGGCCGTGCGACCTCGGAAAAGCCAAG
CAAAACAGTAAGCAAGGCCTTGTCTAGTTATTCTGAGGCCCCGGGCTACGAATCCTCATCCCGT
GTTAATCATCTGCTCGACCCCAGACACCCTCACCCCTGCTCTTCATCCGGGAACCTCACCTAGG
ACCGTCCTCCCGCGGACTTCCGTCGCCGGAAGTGACGTAAAGCGCCAGCCTTCTGGCAATCGAG
AGTGGCCCCGGAAAGGCTGGTGAGACTCAGCGAGGAGCGTCTCCGTGACGGGACAGTCTCTAGG
CCCGCCTCTCCACCTGGTGATGGTCATTGTCTCCCTGAACAGGGATGGAGGAAATAACATCCCA
AGAAGCAGCAGAATCACCAAGGGTCCAGTTTCAGTCTTTGGAGAGCCAGTCTGAATGTCTTTCC
CCAGAGCTTCGGTTTCTGCGGGACACAGAGATGGAGCAGGGATACACTGATGGATTTCCAATTT
CCAAGCCTGATGGAATTTCTCAGCGGGAACAAGATCTACAAGTCTTTGATCTGGAAACTCAGAA
TAGAGAAGGCGTAAGAAATGACTGTTCAGATGGAGAGACCAGAGAAGAAAACAAGCTGTTGATT
CCTAAGCGGAAAATTTCAGAAGAAGTACATTCATACAAAGTGAGAGTAGGAAAATTCAAACAAG
ATATTGCTCAAGTTCCTGAGACCAGAGAGGCTTATAAGTCTGAGGACAGATTAGAAAGGCTCCA
GGAGATTCTAAGAAAATTTCTCTTTCTGGAGAGAGAGTTTAGACAAATAACAATCAGCAAGAAA
ACTTTCAGCAATGAGAAGAACACTGAACCTGAAAAAAGCTTCAGTCTAGACTCCACACTTGATA
CAGATCAAAGAGTTCTTAGAATACAGACCATTGATGACAGTAAATATGACATGAACTTCAACCA
GAACCCAGCTGTTGGCGAACAAGAACCCATAAATCTAACAGAGAATTTTCAGAATACTGACTAT
AAGGAAAGCTTAATGGATCTGTCCCACCTTAATAAATGGGAGAGCATGCCTACCACTGACAGAT
CCTATAAATGTGATACATGTGGAAAAACCTTCCATCAGGCCTCAGCTCTTACTAGACATCAGAG
AATCCACACAAGAGAGAAACCCTACAAATGTAAGGAATGTGAGAAATCTTTTAGTCAGAGCTCA
AGTCTTAGTCGACATAAAAGAATACACACTAGAGAGAAATCCTACAGATGTGAAGCATCTGATA
AATCTTGTGATGCCTCTGATAAGTCTTGTAGCCAGAGCTCAGATGTGCTTCAGCATAAGAAGGT
TCATGCCAAAGCCAAGTCTTACAAGTGTGGGACCTGTGAAAGAGTCTTCAGCCGAAGTGTGCAT
CTTACTCAGCATCAGAGAACACATAAGGACACGGCCTGTAAATGCACTGTGTGTGGCAGTGACT
TCTGCCACACCTCATACTTAGTTGAACATCAGAGACTACATCATCAAGAGAAGTCCTATGAATA
TGATGAATGTGGGCTGGCCTATGTTAAACAGCAAGGAATTCGTTTCCGAGAAAAGCCCTACTCG
TGTAATGAATGTGGGAAAGACTTTAGATTGAATTCCCATCTTGTTCAGCATCAAAGAATTCACA
CAGGAGAAAAACTGCATGAATGTAATGAGCGTGGGAAAGCTTTCAGCCAGACCTCCTGCCTTAG
TCAGCATCATAAAATGCACAGGAAAGAGAAATCATACGAATACAACAATTATGAGGAAAGTTTC
AGTCACAATTCTGATCTTACTCTGCAACAAGAAGTTCCCATTAGAGAGAGAGTCTTTGATTGTG
ATGCATGGGAAGAGAACTTCAGTCAGAGAGCGCACCTCATCCCACATGAAAGGGCGCATACCAA
AGAGAAACCTTATGAATGCAATGAACTTGGGGAGACGTTTAGTCAAGTTCAGGCCTCATTCAAT
ATGTGAGAACTGAGACCAGGGGAAGTCACATATGTACTGAATGTGATAATGTCTTCAGTCATAG
CTTAGCCCTTGGTCAGTATCAGAGAATTAATACCAGAGAGAAACCCGCTGAATGTGATGAATAT
TGGGAAGTTTTTTTGGTGTTAAATTCTTCATTGGCTCCTGTAAATCAGTGCTAGAATATATAGA
CTATGGTACATTCTTCAGATTATTTTCATACCTTAGTCACAGTTGGGGAATTTGTACTGGAGTA
AAATTCCACTGTCAAATGTGAAAAAGCCATCAGTCAACTACCTTGTTGGTTCAGTGTCAAATTT
GTGCCATGCATAAAGCCTGTGAGGATATAGGTGTGTATGTGAGGAAACTCAAGTCATACCCCAG
TGCTTGCTCACATTGAAGAATCTAAACCCTTGAACAGTCTATACCCAAGAAGTCATTTGGGTGT
AGTAAATGTGGCATATCTGTGAGCACGGGTCCATCTATTGTCAGAATGTACCAGATGTGAATCT
GGATATGATGTAAATGCTAAGATCAGAACATCTGCACCAGATGAGACTGATAGAATGCAAACAG
TGAAATTTAACCACTGTATTTTCAGGCCTTATCCAGTATCTCAAAGTATTAGAAAATGGTTACT
GCTCTGTATAATTATTCCTATTTAGTCTCAGTCTTTTTACTGCAGAATAACTGAACCCAGAAGA
TAATTGGTGAACGAAGTCATTTTCTCACAGTATCCTTTAATAAGTATTCTAAGTAGGTACGAGT
ATTTTATTTACAGGACTCCTTTGAGTGGATTTATTTTAATTCGGCCTACATACATTAAAACACT
TCTTTTCTTTGAAATCGATTCTTGTTCACAGTTTACGTAGGATGCTGCTAATGCGCTGTGCTCA
CTTAGCTTCTGGAGAGGAGCTCAATGAGCCTTCTCTGTTCTTGGCCTGAGTGCTCTCCAAAGGA
GACTCAGCCTATTCTTTTCTGAGGACCCTACATGTTACTGTTTCTGTAGCCACACCTTGGGCTT
CCAGTTGATTTCTGCATTCTCCTTGGCAGCCTTAAATGGTGTTCTGGTTGTTAGCTTCTCACCA
GCTGATAAAGACTTACTTCTACATCAGCCATCCATAAGTTTTGGAGGATTCAGTCTTCCTGAGT
TTGTGGCAGGCACCCAAACACTTGCAAGTGATGTCCAATTTTTAGCTTGTTTGCATCCACAGCC
CTTTAAATGAGATGACAAGGACATCAGGGAGCCAGTAAGACTTATGTTGGCCTAGCTACATTTC
ATTCAGTGCCTACTTTGCATGTATGTGTATGTTTAGAATTCTTTTATATGCCTATATTGAAGGC
CAACAAAATGCTCAGGTCTGCTTTTGATAGGGAAACAAAGAACACACAAATCAGAATAAGGAAA
TAGAGCCTTCCAATGAAGATGTTGCTGTTAGTGATGTATCTAGACAGTATTTCAAGAGCGTGGC
AGGTCCGTTCCTGGTCAAACCTTAATCATTAGGATTGCTTCTTTATCTGTTCCCCCTCTACTCC
CTTCATCAAGCCAGGGTAGTATTTTGAAGTGTAGACCTTTGTGCATAATTGTTTGTGCACTGCC
ATACTTTTGTGTTGGGATGCAGCCTTTGCCGCCCAGGCTGGCCTTGAATTCCTGGGTTCACACA
AATTTCCTGCCTCCCAAGTAGCTGGGATTATAGGCATGCGCTCCTGTGCCTGGATTTTATTTTT
GTATTTTAATAGCATCTGCAGGCCATTTAAAGGATCATGTCTATTTTGATTTATAGAAGTGATC
ACAGGTGTTGAGTTCAGTGCCCTATATACTACATAGAGTTCATGATTCTTTACATGATGTCAAA
GCATTTGTTTTCATCTTAAAATAACATCTTGTGAATAAGAAAAGTGTTATTTAAAATTCTAGTT
GTCAATCAAGCAGTTGAGGCTTTCATAGTTCAGATGTCATAATGTTCACTAGGGATCCTCAACC
AATATATAAAATATGCTGCTCACTCTGTAAACCTTGTGGCTAACCTAGGATAGGGATAGTCCTA
CCACTGTATTTTACTTCTTTGCCATCAGCAAGCATAGTGTCTCATCAGGGCAAGAAAATTAACA
TATATCAAATTGATCTAAATGTAAAAGCAAATGAAAAATGCATGTTTTTCTGTCCCTGTCAAAC
ATGTATACTCTTACTTTATAGCGACCAATAGTCACTTCTGGTGACTGAGGCAGAGGATTTGATT
CATCCCTAAGTAGCAGAATCTGTAAAAATCACATGTATGCATTTGGGTTAGGAACGTGCTTTTG
TATTTCTACTTGAATAAAGGTGTGTTCAGCGCTCTTAGACTCTTTGTTTTGAACCAAGTCTGTA
GGCCCCAGGCAGAAGCTCTGGCACCTTGGAATTCTTCACCGTGCCTGTCCCTAGCTCCTTTATG
ATACTCACAAGAGTGATTCGTTCTCTATTGATGCCTAGCTTCCCTTTCCACAGACCTCTGCAGC
CAGTTAGGTTGAGTAGTTTTGTATTTTAGATTTAATTAAAATGTTTATGAATGTTTGCCTGCAT
GTGCATGTGTGTCTGGCATTCATAGAAGACAGAAGAGGACATCAGGTCCCCTGAAACTGGAGTT
AGAGAGACATTTGAGTGGGTTCTGAAATCACTGCTGTTCTCTGCAAGAGCAGGCAGTGTTCTTA
ACTGCGGAACCAACTCTCAAGCCCCAGGAATGAATGTTGGTTCAGGTGGGATGCTTTAGTACAT
AAAATAAAATCAAACAATGTGTGATTTCAATAACGCTCTAAGAATGTTTTGGTAGGTAAAGTAA
ATTTTAAAAAAGAATGCCAAAATCGTTTTTGAAGTAACTTGTCAGTTTAAGTAGATACTTAGTT
GGTGTAGTGACAGTATGAGTTTGTATTAATTAAGCTTTTGGTCTTAGGGGAGGAAAAGAAGAAA
TCTATTAGCTGGACAGTTAGTTCATTTGTCTTCATTAACCTGTGTGCATACTTTCACGTACACA
TTCAAGCTTTCACCACAGTTCTGCATGAGAGCTTGGCTTCGCAAAAGGCTAAAGGGTTTTAGAA
CAAGTTAATGTCTGATGAAAACTGATTAATGGCCGATTCCCAGGTGACAGGGTTTTTGGAAGCT
TTTCCTACGGTATCAGTACTGTTAGCTTCAGCTGATCATACTGGCTTCCAGAGCTGATGTCAGA
GTTGGTTTGATTTGGTTTGAGACCGGACATCTCTGTATATATCCCTGACTGTTCTGGAACCGGC
TATGTAGACCAGGCTGTAGTTCACCTGCCTCCTAAGTGTCACCACCACCCAGCAGAAGAGAGTA
TCTTAAAGTAATCCGTGGACTTAGGGTAACACTGATGTAATGAGTTAACAGGTCAAACCCTCAG
ATTTTCTATCTCCTGCCCAGATATCCCTGCCCCATCATTAGTTTCCCTGTTCATTTCTCAGCAT
TCTAAATTAATTCTTAGCT

hide sequence

RefSeq Acc Id:

XM_006248899 ⟹ XP_006248961

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,475,045 - 14,488,968 (-)	NCBI
mRatBN7.2	12	9,361,220 - 9,374,629 (-)	NCBI
Rnor_6.0	12	11,126,622 - 11,146,153 (-)	NCBI

Sequence:

show sequence

TGGTTGTGAGCCAACATGGGACCTGAGCTCGGATCCTCTGTAAGAAGTTAGGGCTTTTACTTGC
TAAGCCATTTCTCCAAGCCAAATAATTTTTTTGTATGTGCTATCCTTTGACTGAATGCATATCT
GTGCATCCGGAGTGGGCAACATCTCCCGTGTCCTCTGGAACTGAGGGACAAGGTTGTTAGCCAC
AGTATGAGTTCTAGGAACTAAGTGAAGCTTTGTATTCTGCACGAGCAACAGTGCTCTTCAATAC
TGAGCCATGTTTTCAGCCCCTGGGCAGTATTTTAAAATGCTCGATTTATGAAGCGGTTGTTCTT
CCTAATACTAGATAGTTATAAGATTATAGATTACAAGATTCTGGGCTTCACTGGTTTCCGGGGA
AAAAAATAATAAAACTATGGTAGCCTTAGCTTTGCACCTACTATTGCAAAAATGGTTGAGATAA
TCAACCGAGAGGAAATTTTTGTATCGTTTCACACAATTCACAGTTAAACTTGCTCCTTTTGTGC
CTACAGTGAGGCTGCACACAGAGGAGAATTTTTGCCCACCTCATGGTGGGCAGGTTCAAGCAAA
CATGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGG
GAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGGAA
GGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGGAAGGG
AAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTGGTGACTTTGGGCGAATCCTC
TTGGGGAAAATGTGTATGTCCCTTCCAGATAGGGCAAAACCTAGTACGTCCCTTTCTGTGGGCT
ATTTGGGGTCAGGCACTTCCCTAGGAAAAATAAGGCCCGCCCAAATCAGTATTGGGTACAAGGG
TCGTAAGGGACCAAGGAGGAGTCATTAGTAGTATTTCCTATTCTGCCTAGGAATCCTCGTTCAC
GCTCCTGCGGCCTATGTCAAGGGTCTTCTAGTGCCCGAGAAAAATCTAGGGCTCTTTCTCAACT
TCTGCCGCCCTCTTGGTATAAGATGCACGCCAATCAGCAGGGAGGGCCGTGCGACCTCGGAAAA
GCCAAGCAAAACAGTAAGCAAGGCCTTGTCTAGTTATTCTGAGGCCCCGGGCTACGAATCCTCA
TCCCGTGTTAATCATCTGCTCGACCCCAGACACCCTCACCCCTGCTCTTCATCCGGGAACCTCA
CCTAGGACCGTCCTCCCGCGGACTTCCGTCGCCGGAAGTGACGTAAAGCGCCAGCCTTCTGGCA
ATCGAGAGTGGCCCCGGAAAGGCTGGTGAGACTCAGCGAGGAGCGTCTCCGTGACGGGACAGTC
TCTAGGCCCGCCTCTCCACCTGGTGATGGTCATTGTCTCCCTGAACAGGGATGGAGGAAATAAC
ATCCCAAGAAGCAGCAGAATCACCAAGGGTCCAGTTTCAGTCTTTGGAGAGCCAGTCTGAATGT
CTTTCCCCAGAGCTTCGGTTTCTGCGGGACACAGAGATGGAGCAGGGATACACTGATGCTCCAC
CTGTTCCCCAGGTGCCTGCCCTTCCCCATGAGGGAAGCCCAGGAGACCAGGCAGCTGCGCTCCT
GACAGCCAGGTACCAGGAGTTTGTGACATTCGAGGATGTGGCTGTGCATCTTACTCGAGAGGAG
TGGGGATGCCTGGACCCTGTTCAGAGGGAGCTCTACAGAGAAGTGATGTTAGAGAATTATGGAA
ACGTGGTTTCACTGGGCATACTTCTCCGCCTTCCCACCACCCGGATTCATTGTGTGAATTCCTG
CCCAGCCCTGAGTCATACCCAGGATTTCCAATTTCCAAGCCTGATGGAATTTCTCAGCGGGAAC
AAGATCTACAAGTCTTTGATCTGGAAACTCAGAATAGAGAAGGCGTAAGAAATGACTGTTCAGA
TGGAGAGACCAGAGAAGAAAACAAGCTGTTGATTCCTAAGCGGAAAATTTCAGAAGAAGTACAT
TCATACAAAGTGAGAGTAGGAAAATTCAAACAAGATATTGCTCAAGTTCCTGAGACCAGAGAGG
CTTATAAGTCTGAGGACAGATTAGAAAGGCTCCAGGAGATTCTAAGAAAATTTCTCTTTCTGGA
GAGAGAGTTTAGACAAATAACAATCAGCAAGAAAACTTTCAGCAATGAGAAGAACACTGAACCT
GAAAAAAGCTTCAGTCTAGACTCCACACTTGATACAGATCAAAGAGTTCTTAGAATACAGACCA
TTGATGACAGTAAATATGACATGAACTTCAACCAGAACCCAGCTGTTGGCGAACAAGAACCCAT
AAATCTAACAGAGAATTTTCAGAATACTGACTATAAGGAAAGCTTAATGGATCTGTCCCACCTT
AATAAATGGGAGAGCATGCCTACCACTGACAGATCCTATAAATGTGATACATGTGGAAAAACCT
TCCATCAGGCCTCAGCTCTTACTAGACATCAGAGAATCCACACAAGAGAGAAACCCTACAAATG
TAAGGAATGTGAGAAATCTTTTAGTCAGAGCTCAAGTCTTAGTCGACATAAAAGAATACACACT
AGAGAGAAATCCTACAGATGTGAAGCATCTGATAAATCTTGTGATGCCTCTGATAAGTCTTGTA
GCCAGAGCTCAGATGTGCTTCAGCATAAGAAGGTTCATGCCAAAGCCAAGTCTTACAAGTGTGG
GACCTGTGAAAGAGTCTTCAGCCGAAGTGTGCATCTTACTCAGCATCAGAGAACACATAAGGAC
ACGGCCTGTAAATGCACTGTGTGTGGCAGTGACTTCTGCCACACCTCATACTTAGTTGAACATC
AGAGACTACATCATCAAGAGAAGTCCTATGAATATGATGAATGTGGGCTGGCCTATGTTAAACA
GCAAGGAATTCGTTTCCGAGAAAAGCCCTACTCGTGTAATGAATGTGGGAAAGACTTTAGATTG
AATTCCCATCTTGTTCAGCATCAAAGAATTCACACAGGAGAAAAACTGCATGAATGTAATGAGC
GTGGGAAAGCTTTCAGCCAGACCTCCTGCCTTAGTCAGCATCATAAAATGCACAGGAAAGAGAA
ATCATACGAATACAACAATTATGAGGAAAGTTTCAGTCACAATTCTGATCTTACTCTGCAACAA
GAAGTTCCCATTAGAGAGAGAGTCTTTGATTGTGATGCATGGGAAGAGAACTTCAGTCAGAGAG
CGCACCTCATCCCACATGAAAGGGCGCATACCAAAGAGAAACCTTATGAATGCAATGAACTTGG
GGAGACGTTTAGTCAAGTTCAGGCCTCATTCAATATGTGAGAACTGAGACCAGGGGAAGTCACA
TATGTACTGAATGTGATAATGTCTTCAGTCATAGCTTAGCCCTTGGTCAGTATCAGAGAATTAA
TACCAGAGAGAAACCCGCTGAATGTGATGAATATTGGGAAGTTTTTTTGGTGTTAAATTCTTCA
TTGGCTCCTGTAAATCAGTGCTAGAATATATAGACTATGGTACATTCTTCAGATTATTTTCATA
CCTTAGTCACAGTTGGGGAATTTGTACTGGAGTAAAATTCCACTGTCAAATGTGAAAAAGCCAT
CAGTCAACTACCTTGTTGGTTCAGTGTCAAATTTGTGCCATGCATAAAGCCTGTGAGGATATAG
GTGTGTATGTGAGGAAACTCAAGTCATACCCCAGTGCTTGCTCACATTGAAGAATCTAAACCCT
TGAACAGTCTATACCCAAGAAGTCATTTGGGTGTAGTAAATGTGGCATATCTGTGAGCACGGGT
CCATCTATTGTCAGAATGTACCAGATGTGAATCTGGATATGATGTAAATGCTAAGATCAGAACA
TCTGCACCAGATGAGACTGATAGAATGCAAACAGTGAAATTTAACCACTGTATTTTCAGGCCTT
ATCCAGTATCTCAAAGTATTAGAAAATGGTTACTGCTCTGTATAATTATTCCTATTTAGTCTCA
GTCTTTTTACTGCAGAATAACTGAACCCAGAAGATAATTGGTGAACGAAGTCATTTTCTCACAG
TATCCTTTAATAAGTATTCTAAGTAGGTACGAGTATTTTATTTACAGGACTCCTTTGAGTGGAT
TTATTTTAATTCGGCCTACATACATTAAAACACTTCTTTTCTTTGAAATCGATTCTTGTTCACA
GTTTACGTAGGATGCTGCTAATGCGCTGTGCTCACTTAGCTTCTGGAGAGGAGCTCAATGAGCC
TTCTCTGTTCTTGGCCTGAGTGCTCTCCAAAGGAGACTCAGCCTATTCTTTTCTGAGGACCCTA
CATGTTACTGTTTCTGTAGCCACACCTTGGGCTTCCAGTTGATTTCTGCATTCTCCTTGGCAGC
CTTAAATGGTGTTCTGGTTGTTAGCTTCTCACCAGCTGATAAAGACTTACTTCTACATCAGCCA
TCCATAAGTTTTGGAGGATTCAGTCTTCCTGAGTTTGTGGCAGGCACCCAAACACTTGCAAGTG
ATGTCCAATTTTTAGCTTGTTTGCATCCACAGCCCTTTAAATGAGATGACAAGGACATCAGGGA
GCCAGTAAGACTTATGTTGGCCTAGCTACATTTCATTCAGTGCCTACTTTGCATGTATGTGTAT
GTTTAGAATTCTTTTATATGCCTATATTGAAGGCCAACAAAATGCTCAGGTCTGCTTTTGATAG
GGAAACAAAGAACACACAAATCAGAATAAGGAAATAGAGCCTTCCAATGAAGATGTTGCTGTTA
GTGATGTATCTAGACAGTATTTCAAGAGCGTGGCAGGTCCGTTCCTGGTCAAACCTTAATCATT
AGGATTGCTTCTTTATCTGTTCCCCCTCTACTCCCTTCATCAAGCCAGGGTAGTATTTTGAAGT
GTAGACCTTTGTGCATAATTGTTTGTGCACTGCCATACTTTTGTGTTGGGATGCAGCCTTTGCC
GCCCAGGCTGGCCTTGAATTCCTGGGTTCACACAAATTTCCTGCCTCCCAAGTAGCTGGGATTA
TAGGCATGCGCTCCTGTGCCTGGATTTTATTTTTGTATTTTAATAGCATCTGCAGGCCATTTAA
AGGATCATGTCTATTTTGATTTATAGAAGTGATCACAGGTGTTGAGTTCAGTGCCCTATATACT
ACATAGAGTTCATGATTCTTTACATGATGTCAAAGCATTTGTTTTCATCTTAAAATAACATCTT
GTGAATAAGAAAAGTGTTATTTAAAATTCTAGTTGTCAATCAAGCAGTTGAGGCTTTCATAGTT
CAGATGTCATAATGTTCACTAGGGATCCTCAACCAATATATAAAATATGCTGCTCACTCTGTAA
ACCTTGTGGCTAACCTAGGATAGGGATAGTCCTACCACTGTATTTTACTTCTTTGCCATCAGCA
AGCATAGTGTCTCATCAGGGCAAGAAAATTAACATATATCAAATTGATCTAAATGTAAAAGCAA
ATGAAAAATGCATGTTTTTCTGTCCCTGTCAAACATGTATACTCTTACTTTATAGCGACCAATA
GTCACTTCTGGTGACTGAGGCAGAGGATTTGATTCATCCCTAAGTAGCAGAATCTGTAAAAATC
ACATGTATGCATTTGGGTTAGGAACGTGCTTTTGTATTTCTACTTGAATAAAGGTGTGTTCAGC
GCTCTTAGACTCTTTGTTTTGAACCAAGTCTGTAGGCCCCAGGCAGAAGCTCTGGCACCTTGGA
ATTCTTCACCGTGCCTGTCCCTAGCTCCTTTATGATACTCACAAGAGTGATTCGTTCTCTATTG
ATGCCTAGCTTCCCTTTCCACAGACCTCTGCAGCCAGTTAGGTTGAGTAGTTTTGTATTTTAGA
TTTAATTAAAATGTTTATGAATGTTTGCCTGCATGTGCATGTGTGTCTGGCATTCATAGAAGAC
AGAAGAGGACATCAGGTCCCCTGAAACTGGAGTTAGAGAGACATTTGAGTGGGTTCTGAAATCA
CTGCTGTTCTCTGCAAGAGCAGGCAGTGTTCTTAACTGCGGAACCAACTCTCAAGCCCCAGGAA
TGAATGTTGGTTCAGGTGGGATGCTTTAGTACATAAAATAAAATCAAACAATGTGTGATTTCAA
TAACGCTCTAAGAATGTTTTGGTAGGTAAAGTAAATTTTAAAAAAGAATGCCAAAATCGTTTTT
GAAGTAACTTGTCAGTTTAAGTAGATACTTAGTTGGTGTAGTGACAGTATGAGTTTGTATTAAT
TAAGCTTTTGGTCTTAGGGGAGGAAAAGAAGAAATCTATTAGCTGGACAGTTAGTTCATTTGTC
TTCATTAACCTGTGTGCATACTTTCACGTACACATTCAAGCTTTCACCACAGTTCTGCATGAGA
GCTTGGCTTCGCAAAAGGCTAAAGGGTTTTAGAACAAGTTAATGTCTGATGAAAACTGATTAAT
GGCCGATTCCCAGGTGACAGGGTTTTTGGAAGCTTTTCCTACGGTATCAGTACTGTTAGCTTCA
GCTGATCATACTGGCTTCCAGAGCTGATGTCAGAGTTGGTTTGATTTGGTTTGAGACCGGACAT
CTCTGTATATATCCCTGACTGTTCTGGAACCGGCTATGTAGACCAGGCTGTAGTTCACCTGCCT
CCTAAGTGTCACCACCACCCAGCAGAAGAGAGTATCTTAAAGTAATCCGTGGACTTAGGGTAAC
ACTGATGTAATGAGTTAACAGGTCAAACCCTCAGATTTTCTATCTCCTGCCCAGATATCCCTGC
CCCATCATTAGTTTCCCTGTTCATTTCTCAGCATTCTAAATTAATTCTTAGCT

hide sequence

RefSeq Acc Id:

XM_008768981 ⟹ XP_008767203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,481,933 - 14,488,937 (-)	NCBI
mRatBN7.2	12	9,368,157 - 9,374,629 (-)	NCBI
Rnor_6.0	12	11,139,438 - 11,146,173 (-)	NCBI

Sequence:

show sequence

GATGTATCTGGAGTTACAGGTGGTTGTGAGCCAACATGGGACCTGAGCTCGGATCCTCTGTAAG
AAGTTAGGGCTTTTACTTGCTAAGCCATTTCTCCAAGCCAAATAATTTTTTTGTATGTGCTATC
CTTTGACTGAATGCATATCTGTGCATCCGGAGTGGGCAACATCTCCCGTGTCCTCTGGAACTGA
GGGACAAGGTTGTTAGCCACAGTATGAGTTCTAGGAACTAAGTGAAGCTTTGTATTCTGCACGA
GCAACAGTGCTCTTCAATACTGAGCCATGTTTTCAGCCCCTGGGCAGTATTTTAAAATGCTCGA
TTTATGAAGCGGTTGTTCTTCCTAATACTAGATAGTTATAAGATTATAGATTACAAGATTCTGG
GCTTCACTGGTTTCCGGGGAAAAAAATAATAAAACTATGGTAGCCTTAGCTTTGCACCTACTAT
TGCAAAAATGGTTGAGATAATCAACCGAGAGGAAATTTTTGTATCGTTTCACACAATTCACAGT
TAAACTTGCTCCTTTTGTGCCTACAGTGAGGCTGCACACAGAGGAGAATTTTTGCCCACCTCAT
GGTGGGCAGGTTCAAGCAAACATGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGG
AATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAAT
GTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTC
TTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGGAATGTCTTG
GTGACTTTGGGCGAATCCTCTTGGGGAAAATGTGTATGTCCCTTCCAGATAGGGCAAAACCTAG
TACGTCCCTTTCTGTGGGCTATTTGGGGTCAGGCACTTCCCTAGGAAAAATAAGGCCCGCCCAA
ATCAGTATTGGGTACAAGGGTCGTAAGGGACCAAGGAGGAGTCATTAGTAGTATTTCCTATTCT
GCCTAGGAATCCTCGTTCACGCTCCTGCGGCCTATGTCAAGGGTCTTCTAGTGCCCGAGAAAAA
TCTAGGGCTCTTTCTCAACTTCTGCCGCCCTCTTGGTATAAGATGCACGCCAATCAGCAGGGAG
GGCCGTGCGACCTCGGAAAAGCCAAGCAAAACAGTAAGCAAGGCCTTGTCTAGTTATTCTGAGG
CCCCGGGCTACGAATCCTCATCCCGTGTTAATCATCTGCTCGACCCCAGACACCCTCACCCCTG
CTCTTCATCCGGGAACCTCACCTAGGACCGTCCTCCCGCGGACTTCCGTCGCCGGAAGTGACGT
AAAGCGCCAGCCTTCTGGCAATCGAGAGTGGCCCCGGAAAGGCTGGTGAGACTCAGCGAGGAGC
GTCTCCGTGACGGGACAGTCTCTAGGCCCGCCTCTCCACCTGGTGATGGTCATTGTCTCCCTGA
ACAGGGATGGAGGAAATAACATCCCAAGAAGCAGCAGAATCACCAAGGGTCCAGTTTCAGTCTT
TGGAGAGCCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCGGGACACAGAGATGGAGCA
GGGATACACTGATGGCATACTTCTCCGCCTTCCCACCACCCGGATTCATTGTGTGAATTCCTGC
CCAGCCCTGAGTCATACCCAGGCAAGTGCTTTCTCTGGAGAAACACTTGCAGTCCTTACAGCAG
GAATCACCAAGAGATGGCCCAGGTATCGACTTTCCATCGGGAGTGCTTGTCCCAGCACGGAAAC
TCCTTTTCCAAGATTGTAA

hide sequence

RefSeq Acc Id:

XM_039089550 ⟹ XP_038945478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,415 (-)	NCBI
mRatBN7.2	12	9,355,040 - 9,374,629 (-)	NCBI

RefSeq Acc Id:

XM_039089554 ⟹ XP_038945482

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,969 (-)	NCBI
mRatBN7.2	12	9,355,040 - 9,375,448 (-)	NCBI

RefSeq Acc Id:

XM_039089557 ⟹ XP_038945485

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,475,784 - 14,488,938 (-)	NCBI
mRatBN7.2	12	9,362,008 - 9,374,629 (-)	NCBI

RefSeq Acc Id:

XM_063271445 ⟹ XP_063127515

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,415 (-)	NCBI

RefSeq Acc Id:

XM_063271446 ⟹ XP_063127516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,397 (-)	NCBI

RefSeq Acc Id:

XM_063271447 ⟹ XP_063127517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,247 (-)	NCBI

RefSeq Acc Id:

XM_063271448 ⟹ XP_063127518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,247 (-)	NCBI

RefSeq Acc Id:

XM_063271449 ⟹ XP_063127519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,247 (-)	NCBI

RefSeq Acc Id:

XM_063271450 ⟹ XP_063127520

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,277 (-)	NCBI

RefSeq Acc Id:

XM_063271451 ⟹ XP_063127521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,486,595 (-)	NCBI

RefSeq Acc Id:

XM_063271452 ⟹ XP_063127522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,486,514 (-)	NCBI

RefSeq Acc Id:

XM_063271453 ⟹ XP_063127523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,481,933 - 14,489,006 (-)	NCBI

RefSeq Acc Id:

XM_063271454 ⟹ XP_063127524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,466,006 - 14,488,970 (-)	NCBI

RefSeq Acc Id:

XM_063271455 ⟹ XP_063127525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,967 (-)	NCBI

RefSeq Acc Id:

XM_063271456 ⟹ XP_063127526

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,481,933 - 14,488,991 (-)	NCBI

RefSeq Acc Id:

XM_063271457 ⟹ XP_063127527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,481,933 - 14,489,049 (-)	NCBI

RefSeq Acc Id:

XR_001840600

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,466,006 - 14,488,968 (-)	NCBI
mRatBN7.2	12	9,349,985 - 9,375,449 (-)	NCBI
Rnor_6.0	12	11,122,779 - 11,146,182 (-)	NCBI

Sequence:

show sequence

GTGTTGGTTGATGTATCTGGAGTTACAGGTGGTTGTGAGCCAACATGGGACCTGAGCTCGGATC
CTCTGTAAGAAGTTAGGGCTTTTACTTGCTAAGCCATTTCTCCAAGCCAAATAATTTTTTTGTA
TGTGCTATCCTTTGACTGAATGCATATCTGTGCATCCGGAGTGGGCAACATCTCCCGTGTCCTC
TGGAACTGAGGGACAAGGTTGTTAGCCACAGTATGAGTTCTAGGAACTAAGTGAAGCTTTGTAT
TCTGCACGAGCAACAGTGCTCTTCAATACTGAGCCATGTTTTCAGCCCCTGGGCAGTATTTTAA
AATGCTCGATTTATGAAGCGGTTGTTCTTCCTAATACTAGATAGTTATAAGATTATAGATTACA
AGATTCTGGGCTTCACTGGTTTCCGGGGAAAAAAATAATAAAACTATGGTAGCCTTAGCTTTGC
ACCTACTATTGCAAAAATGGTTGAGATAATCAACCGAGAGGAAATTTTTGTATCGTTTCACACA
ATTCACAGTTAAACTTGCTCCTTTTGTGCCTACAGTGAGGCTGCACACAGAGGAGAATTTTTGC
CCACCTCATGGTGGGCAGGTTCAAGCAAACATGAAGGGAAGAAAGGATGGGAATCAAAGCACGG
CCTGGCAGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCT
GGCAGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGC
AGGAATGTCTTGGTGACTTTGGGGAAGGGAAGAAAGGATGGGAATCAAAGCACGGCCTGGCAGG
AATGTCTTGGTGACTTTGGGCGAATCCTCTTGGGGAAAATGTGTATGTCCCTTCCAGATAGGGC
AAAACCTAGTACGTCCCTTTCTGTGGGCTATTTGGGGTCAGGCACTTCCCTAGGAAAAATAAGG
CCCGCCCAAATCAGTATTGGGTACAAGGGTCGTAAGGGACCAAGGAGGAGTCATTAGTAGTATT
TCCTATTCTGCCTAGGAATCCTCGTTCACGCTCCTGCGGCCTATGTCAAGGGTCTTCTAGTGCC
CGAGAAAAATCTAGGGCTCTTTCTCAACTTCTGCCGCCCTCTTGGTATAAGATGCACGCCAATC
AGCAGGGAGGGCCGTGCGACCTCGGAAAAGCCAAGCAAAACAGTAAGCAAGGCCTTGTCTAGTT
ATTCTGAGGCCCCGGGCTACGAATCCTCATCCCGTGTTAATCATCTGCTCGACCCCAGACACCC
TCACCCCTGCTCTTCATCCGGGAACCTCACCTAGGACCGTCCTCCCGCGGACTTCCGTCGCCGG
AAGTGACGTAAAGCGCCAGCCTTCTGGCAATCGAGAGTGGCCCCGGAAAGGCTGGTGAGACTCA
GCGAGGAGCGTCTCCGTGACGGGACAGTCTCTAGGCCCGCCTCTCCACCTGGTGATGGTCATTG
TCTCCCTGAACAGGGATGGAGGAAATAACATCCCAAGAAGCAGCAGAATCACCAAGGGTCCAGT
TTCAGTCTTTGGAGAGCCAGTCTGAATGTCTTTCCCCAGAGCTTCGGTTTCTGCGGGACACAGA
GATGGAGCAGGGATACACTGATGCTCCACCTGTTCCCCAGGTGCCTGCCCTTCCCCATGAGGGA
AGCCCAGGAGACCAGGCAGCTGCGCTCCTGACAGCCAGGTACCAGGAGTTTGTGACATTCGAGG
ATGTGGCTGTGCATCTTACTCGAGAGGAGTGGGGATGCCTGGACCCTGTTCAGAGGGAGCTCTA
CAGAGAAGTGATGTTAGAGAATTATGGAAACGTGGTTTCACTGGGCATACTTCTCCGCCTTCCC
ACCACCCGGATTCATTGTGTGAATTCCTGCCCAGCCCTGAGTCATACCCAGGCAAGTGCTTTCT
CTGGAGAAACACTTGCAGTCCTTACAGCAGGAATCACCAAGAGATGGCCCAGGTATCGACTTTC
CATCGGGAGTGCTTGTCCCAGCACGGAAACTCCTTTTCCAAGATTGATTTCCAATTTCCAAGCC
TGATGGAATTTCTCAGCGGGAACAAGATCTACAAGTCTTTGATCTGGAAACTCAGAATAGAGAA
GGCGTAAGAAATGACTGTTCAGGCGATCTCTGCTCTGGATCAGTATGTTCTACGACAGATTCTG
AAGGACCACCTGAGTGATGTCACCGGAGTCCGTTTCAAGAGTGGGAGCCTTGCCAGACTAAAGG
CAGTCAGTGCTCTTAACTGCTGAGCCATCTTTCCAGCCTGATTAAAATTGTTTCTAAGGCTTCC
CCA

hide sequence

RefSeq Acc Id:

XR_005491645

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,475,045 - 14,488,968 (-)	NCBI
mRatBN7.2	12	9,361,220 - 9,375,444 (-)	NCBI

RefSeq Acc Id:

XR_010056400

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,968 (-)	NCBI

RefSeq Acc Id:

XR_010056401

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,468,817 - 14,488,967 (-)	NCBI

RefSeq Acc Id:

XR_010056402

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,475,045 - 14,488,966 (-)	NCBI

RefSeq Acc Id:

XR_010056403

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,475,787 - 14,488,938 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001008363	(Get FASTA)	NCBI Sequence Viewer
	NP_001424413	(Get FASTA)	NCBI Sequence Viewer
	NP_001424414	(Get FASTA)	NCBI Sequence Viewer
	XP_003751174	(Get FASTA)	NCBI Sequence Viewer
	XP_006248957	(Get FASTA)	NCBI Sequence Viewer
	XP_006248961	(Get FASTA)	NCBI Sequence Viewer
	XP_008767203	(Get FASTA)	NCBI Sequence Viewer
	XP_038945478	(Get FASTA)	NCBI Sequence Viewer
	XP_038945482	(Get FASTA)	NCBI Sequence Viewer
	XP_038945485	(Get FASTA)	NCBI Sequence Viewer
	XP_063127515	(Get FASTA)	NCBI Sequence Viewer
	XP_063127516	(Get FASTA)	NCBI Sequence Viewer
	XP_063127517	(Get FASTA)	NCBI Sequence Viewer
	XP_063127518	(Get FASTA)	NCBI Sequence Viewer
	XP_063127519	(Get FASTA)	NCBI Sequence Viewer
	XP_063127520	(Get FASTA)	NCBI Sequence Viewer
	XP_063127521	(Get FASTA)	NCBI Sequence Viewer
	XP_063127522	(Get FASTA)	NCBI Sequence Viewer
	XP_063127523	(Get FASTA)	NCBI Sequence Viewer
	XP_063127524	(Get FASTA)	NCBI Sequence Viewer
	XP_063127525	(Get FASTA)	NCBI Sequence Viewer
	XP_063127526	(Get FASTA)	NCBI Sequence Viewer
	XP_063127527	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH85937	(Get FASTA)	NCBI Sequence Viewer
	EDL89598	(Get FASTA)	NCBI Sequence Viewer
	EDL89599	(Get FASTA)	NCBI Sequence Viewer
	EDL89600	(Get FASTA)	NCBI Sequence Viewer
	EDL89601	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000064091
	ENSRNOP00000064091.2
	ENSRNOP00000072025
	ENSRNOP00000072025.1
	ENSRNOP00000080958
	ENSRNOP00000080958.2
	ENSRNOP00000082698.1
	ENSRNOP00000095143
	ENSRNOP00000095143.1
	ENSRNOP00000112588
	ENSRNOP00000112588.1

RefSeq Acc Id:

NP_001008363 ⟸ NM_001008362

- UniProtKB:

Q5RKG8 (UniProtKB/TrEMBL), A0A0G2K1X7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEEITSQEAAESPRVQFQSLESQSECLSPELRFLRDTEMEQGYTDGFPISKPDGISQREQDLQV
FDLETQNREGVRNDCSDGETREENKLLIPKRKISEEVHSYKVRVGKFKQDIAQVPETREAYKSE
DRLERLQEILRKFLFLEREFRQITISKKTFSNEKNTEPEKSFSLDSTLDTDQRVLRIQTIDDSK
YDMNFNQNPAVGEQEPINLTENFQNTDYKESLMDLSHLNKWESMPTTDRSYKCDTCGKTFHQAS
ALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKSYRCEASDKSCDASDKSCSQSSD
VLQHKKVHAKAKSYKCGTCERVFSRSVHLTQHQRTHKDTACKCTVCGSDFCHTSYLVEHQRLHH
QEKSYEYDECGLAYVKQQGIRFREKPYSCNECGKDFRLNSHLVQHQRIHTGEKLHECNERGKAF
SQTSCLSQHHKMHRKEKSYEYNNYEESFSHNSDLTLQQEVPIRERVFDCDAWEENFSQRAHLIP
HERAHTKEKPYECNELGETFSQVQASFNM

hide sequence

RefSeq Acc Id:

XP_006248957 ⟸ XM_006248895

- Peptide Label:

isoform X3

- Sequence:

show sequence

MEEITSQEAAESPRVQFQSLESQSECLSPELRFLRDTEMEQGYTDGFPISKPDGISQREQDLQV
FDLETQNREGVRNDCSDGETREENKLLIPKRKISEEVHSYKVRVGKFKQDIAQVPETREAYKSE
DRLERLQEILRKFLFLEREFRQITISKKTFSNEKNTEPEKSFSLDSTLDTDQRVLRIQTIDDSK
YDMNFNQNPAVGEQEPINLTENFQNTDYKESLMDLSHLNKWESMPTTDRSYKCDTCGKTFHQAS
ALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKSYRCEASDKSCDASDKSCSQSSD
VLQHKKVHAKAKSYKCGTCERVFSRSVHLTQHQRTHKDTACKCTVCGSDFCHTSYLVEHQRLHH
QEKSYEYDECGLAYVKQQGIRFREKPYSCNECGKDFRLNSHLVQHQRIHTGEKLHECNERGKAF
SQTSCLSQHHKMHRKEKSYEYNNYEESFSHNSDLTLQQEVPIRERVFDCDAWEENFSQRAHLIP
HERAHTKEKPYECNELGETFSQVQASFNM

hide sequence

RefSeq Acc Id:

XP_006248961 ⟸ XM_006248899

- Peptide Label:

isoform X8

- Sequence:

show sequence

MPGPCSEGALQRSDVRELWKRGFTGHTSPPSHHPDSLCEFLPSPESYPGFPISKPDGISQREQD
LQVFDLETQNREGVRNDCSDGETREENKLLIPKRKISEEVHSYKVRVGKFKQDIAQVPETREAY
KSEDRLERLQEILRKFLFLEREFRQITISKKTFSNEKNTEPEKSFSLDSTLDTDQRVLRIQTID
DSKYDMNFNQNPAVGEQEPINLTENFQNTDYKESLMDLSHLNKWESMPTTDRSYKCDTCGKTFH
QASALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKSYRCEASDKSCDASDKSCSQ
SSDVLQHKKVHAKAKSYKCGTCERVFSRSVHLTQHQRTHKDTACKCTVCGSDFCHTSYLVEHQR
LHHQEKSYEYDECGLAYVKQQGIRFREKPYSCNECGKDFRLNSHLVQHQRIHTGEKLHECNERG
KAFSQTSCLSQHHKMHRKEKSYEYNNYEESFSHNSDLTLQQEVPIRERVFDCDAWEENFSQRAH
LIPHERAHTKEKPYECNELGETFSQVQASFNM

hide sequence

RefSeq Acc Id:	XP_008767203 ⟸ XM_008768981
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6AKX0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEITSQEAAESPRVQFQSLESQSECLSPELRFLRDTEMEQGYTDGILLRLPTTRIHCVNSCPA LSHTQASAFSGETLAVLTAGITKRWPRYRLSIGSACPSTETPFPRL hide sequence

RefSeq Acc Id:	XP_003751174 ⟸ XM_003751126
- Peptide Label:	isoform X6
- Sequence:	show sequence MEEITSQEAAESPRVQFQSLESQSECLSPELRFLRDTEMEQGYTDAPPVPQVPALPHEGSPGDQ AAALLTARYQEFVTFEDVAVHLTREEWGCLDPVQRELYREVMLENYGNVVSLGILLRLPTTRIH CVNSCPALSHTQASAFSGETLAVLTAGITKRWPRYRLSIGSACPSTETPFPRL hide sequence

Ensembl Acc Id:

ENSRNOP00000072025 ⟸ ENSRNOT00000084637

RefSeq Acc Id:	XP_038945482 ⟸ XM_039089554
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038945478 ⟸ XM_039089550
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038945485 ⟸ XM_039089557
- Peptide Label:	isoform X11
- UniProtKB:	A6K1E3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000064091 ⟸ ENSRNOT00000071795

Ensembl Acc Id:

ENSRNOP00000095143 ⟸ ENSRNOT00000105186

Ensembl Acc Id:

ENSRNOP00000080958 ⟸ ENSRNOT00000116126

Ensembl Acc Id:

ENSRNOP00000082698 ⟸ ENSRNOT00000115559

RefSeq Acc Id:	XP_063127524 ⟸ XM_063271454
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063127525 ⟸ XM_063271455
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063127515 ⟸ XM_063271445
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063127516 ⟸ XM_063271446
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063127520 ⟸ XM_063271450
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K1X7 (UniProtKB/TrEMBL), Q5RKG8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127519 ⟸ XM_063271449
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K1X7 (UniProtKB/TrEMBL), Q5RKG8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127518 ⟸ XM_063271448
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063127517 ⟸ XM_063271447
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063127521 ⟸ XM_063271451
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063127522 ⟸ XM_063271452
- Peptide Label:	isoform X5
- UniProtKB:	A6K1E1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127527 ⟸ XM_063271457
- Peptide Label:	isoform X11
- UniProtKB:	A6K1E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127523 ⟸ XM_063271453
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063127526 ⟸ XM_063271456
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6AKX0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000112588 ⟸ ENSRNOT00000128934

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R415-F1-model_v2	AlphaFold	M0R415	1-496	view protein structure
AF-Q5RKG8-F1-model_v2	AlphaFold	Q5RKG8	1-541	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698410

Promoter ID:

EPDNEW_R8935

Type:

initiation region

Name:

Zfp655_1

Description:

zinc finger protein 655

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	12	11,144,810 - 11,144,870	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309158	AgrOrtholog
BioCyc Gene	G2FUF-20063	BioCyc
Ensembl Genes	ENSRNOG00000046761	Ensembl
	ENSRNOG00000060129	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000071795	ENTREZGENE
	ENSRNOT00000071795.3	UniProtKB/TrEMBL
	ENSRNOT00000084637	ENTREZGENE
	ENSRNOT00000084637.3	UniProtKB/TrEMBL
	ENSRNOT00000105186	ENTREZGENE
	ENSRNOT00000105186.2	UniProtKB/TrEMBL
	ENSRNOT00000115559	ENTREZGENE
	ENSRNOT00000115559.2	UniProtKB/TrEMBL
	ENSRNOT00000116126	ENTREZGENE
	ENSRNOT00000116126.2	UniProtKB/TrEMBL
	ENSRNOT00000128934	ENTREZGENE
	ENSRNOT00000128934.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7121505	IMAGE-MGC_LOAD
InterPro	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:360764	UniProtKB/TrEMBL
MGC_CLONE	MGC:95009	IMAGE-MGC_LOAD
NCBI Gene	360764	ENTREZGENE
PANTHER	GASTRULA ZINC FINGER PROTEIN XLCGF26.1-LIKE-RELATED	UniProtKB/TrEMBL
	ZINC FINGER AND BTB DOMAIN-CONTAINING	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PhenoGen	Zfp655	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000046761	RatGTEx
	ENSRNOG00000060129	RatGTEx
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2K1X7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZQZ7_RAT	UniProtKB/TrEMBL
	A0A8I5ZXK7_RAT	UniProtKB/TrEMBL
	A0A8I6AKX0	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M0X8_RAT	UniProtKB/TrEMBL
	A6K1E1	ENTREZGENE, UniProtKB/TrEMBL
	A6K1E2_RAT	UniProtKB/TrEMBL
	A6K1E3	ENTREZGENE, UniProtKB/TrEMBL
	M0R415_RAT	UniProtKB/TrEMBL
	Q5RKG8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Zfp655	zinc finger protein 655	LOC103690102	zinc finger protein 655-like	Data merged from RGD:9264030	737654	PROVISIONAL
2015-07-29	Zfp655	zinc finger protein 655	LOC100910762	zinc finger protein 205-like	Data merged from RGD:6496474	737654	PROVISIONAL
2014-08-25	LOC103690102	zinc finger protein 655-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2012-07-05	LOC100910762	zinc finger protein 205-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2011-07-19	Zfp655	zinc finger protein 655	Znf655	zinc finger protein 655	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-25	Znf655	zinc finger protein 655	Zfp655	zinc finger protein 655	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Zfp655	zinc finger protein 655	RGD1309158	similar to RIKEN cDNA 2700038I16	Symbol and Name updated	1299863	APPROVED
2005-12-06	RGD1309158	similar to RIKEN cDNA 2700038I16	RGD1309158_predicted	similar to RIKEN cDNA 2700038I16 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1309158_predicted	similar to RIKEN cDNA 2700038I16 (predicted)	LOC360764_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC360764_predicted	similar to RIKEN cDNA 2700038I16 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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