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Gene: Slc46a3 (solute carrier family 46, member 3) Rattus norvegicus

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Symbol:

Slc46a3

Name:

solute carrier family 46, member 3

RGD ID:

1307594

Description:

Predicted to enable copper ion transmembrane transporter activity. Predicted to be involved in cellular response to 2,3,7,8-tetrachlorodibenzodioxine and vacuolar transmembrane transport. Predicted to be located in lysosome and membrane. Predicted to be active in lysosomal membrane. Orthologous to human SLC46A3 (solute carrier family 46 member 3); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC288454; lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3; MGC108818; RGD1307594; similar to RIKEN cDNA 1200006F02; solute carrier family 46 member 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC46A3 (solute carrier family 46 member 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Slc46a3 (solute carrier family 46, member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc46a3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC46A3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC46A3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc46a3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC46A3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC46A3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc46a3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Slc46a3 (solute carrier family 46 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Slc46a3 (solute carrier family 46, member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SLC46A3 (solute carrier family 46 member 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-5g14.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc46a3 (solute carrier family 46 member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG15553	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YJL163C	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	CG15890	Alliance	DIOPT (OMA\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	CG15890	Alliance	DIOPT (OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y43F8A.5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	Y43F8A.5	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	Y4C6B.5	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG30344	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG30345	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG42514	Alliance	DIOPT (OMA\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	CG42514	Alliance	DIOPT (OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8046	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8008	Alliance	DIOPT (InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc46a3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc46a3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	12,176,776 - 12,193,256 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	12,176,807 - 12,193,255 (+)	Ensembl				GRCr8
mRatBN7.2	12	7,140,610 - 7,157,093 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	7,140,668 - 7,157,092 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	7,824,133 - 7,840,474 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	8,447,273 - 8,463,614 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	7,475,247 - 7,491,591 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	8,725,479 - 8,741,944 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	8,725,517 - 8,741,951 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	10,842,174 - 10,858,621 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	7,698,889 - 7,715,296 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	8,884,584 - 8,901,010 (+)	NCBI		Celera
RGSC_v3.1	12	7,728,816 - 7,745,223 (+)	NCBI
Cytogenetic Map	12	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

7,12-dimethyltetraphene (ISO)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

Benzo[k]fluoranthene (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

cefaloridine (EXP)

chlorpyrifos (ISO)

chromium(6+) (ISO)

chrysene (ISO)

cisplatin (ISO)

clofibrate (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dibenzofurans (ISO)

Dibutyl phosphate (ISO)

dichloroacetic acid (ISO)

diclofenac (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

epoxiconazole (ISO)

ethylparaben (ISO)

ferric oxide (ISO)

gentamycin (EXP)

glafenine (EXP)

GSK-J4 (ISO)

indometacin (ISO)

isotretinoin (ISO)

lipopolysaccharide (ISO)

metformin (EXP)

Muraglitazar (EXP)

nickel sulfate (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

progesterone (ISO)

resveratrol (ISO)

rifampicin (ISO)

rotenone (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (EXP)

sunitinib (ISO)

Tesaglitazar (EXP)

tetrachloroethene (ISO)

tetrachloromethane (EXP,ISO)

tetraphene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

tremolite asbestos (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ISO)

copper ion transmembrane transport (IEA)

transmembrane transport (IEA)

vacuolar transmembrane transport (IBA,IEA,ISO)

Cellular Component

lysosomal membrane (IBA,IEA,ISO)

Molecular Function

copper ion transmembrane transporter activity (ISO)

protein binding (ISO)

symporter activity (IEA)

transmembrane transporter activity (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19056867	PMID:33436590

Genomics

Comparative Map Data

Slc46a3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	12,176,776 - 12,193,256 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	12,176,807 - 12,193,255 (+)	Ensembl				GRCr8
mRatBN7.2	12	7,140,610 - 7,157,093 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	7,140,668 - 7,157,092 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	7,824,133 - 7,840,474 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	8,447,273 - 8,463,614 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	7,475,247 - 7,491,591 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	8,725,479 - 8,741,944 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	8,725,517 - 8,741,951 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	10,842,174 - 10,858,621 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	7,698,889 - 7,715,296 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	8,884,584 - 8,901,010 (+)	NCBI		Celera
RGSC_v3.1	12	7,728,816 - 7,745,223 (+)	NCBI
Cytogenetic Map	12	p11	NCBI

SLC46A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	28,700,080 - 28,718,970 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	28,700,064 - 28,719,012 (-)	Ensembl			hg38	GRCh38
GRCh37	13	29,274,217 - 29,293,107 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	28,172,217 - 28,190,962 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	13	10,349,991 - 10,368,926 (-)	NCBI		Celera
Cytogenetic Map	13	q12.3	NCBI
HuRef	13	10,095,902 - 10,114,829 (-)	NCBI		HuRef
CHM1_1	13	29,242,542 - 29,261,446 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	27,923,367 - 27,942,251 (-)	NCBI		T2T-CHM13v2.0

Slc46a3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	147,812,707 - 147,831,670 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	147,815,247 - 147,831,625 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	147,875,897 - 147,894,861 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	147,878,437 - 147,894,815 (-)	Ensembl			mm10	GRCm38
MGSCv37	5	148,690,017 - 148,706,378 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	148,188,801 - 148,205,164 (-)	NCBI		MGSCv36	mm8
Celera	5	145,873,979 - 145,890,370 (-)	NCBI		Celera
Cytogenetic Map	5	G3	NCBI
cM Map	5	87.58	NCBI

Slc46a3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955497	8,015,017 - 8,033,302 (-)	Ensembl
ChiLan1.0	NW_004955497	8,015,244 - 8,034,195 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC46A3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	28,293,837 - 28,312,729 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	19,390,548 - 19,417,946 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	9,987,309 - 10,007,152 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	28,327,633 - 28,347,534 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	28,327,633 - 28,347,534 (-)	Ensembl			panPan2	panpan1.1

SLC46A3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	11,031,696 - 11,050,265 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	11,032,483 - 11,049,433 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	11,094,651 - 11,113,196 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	11,157,872 - 11,176,420 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	11,157,843 - 11,176,420 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	11,055,394 - 11,073,937 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	11,047,803 - 11,066,347 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	11,089,745 - 11,108,290 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slc46a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	172,152,152 - 172,177,932 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	23,778,967 - 23,800,738 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	23,779,294 - 23,800,088 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC46A3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	5,982,443 - 6,000,701 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	11	5,983,198 - 6,000,728 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	5,678,731 - 5,692,527 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC46A3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	7,802,170 - 7,819,608 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	7,801,728 - 7,819,584 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666057	36,569,879 - 36,587,647 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc46a3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624776	9,783,816 - 9,801,495 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624776	9,783,827 - 9,802,993 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Slc46a3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	16	5,960,832 - 5,976,304 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Slc46a3
154 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	323
Count of miRNA genes:	187
Interacting mature miRNAs:	216
Transcripts:	ENSRNOT00000001243
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312418	Kidm41	Kidney mass QTL 41	3.7	0.0001	kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	12	5921918	25247790	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
2306789	Ean6	Experimental allergic neuritis QTL 6	4.9		nervous system integrity trait (VT:0010566)	experimental autoimmune neuritis severity score (CMO:0001528)	12	1	29775522	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
1357337	Gluco3	Glucose level QTL 3		0.0004	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	12	1	16966671	Rat
5684888	Pia42	Pristane induced arthritis QTL 42			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	3489416	48489416	Rat
1331739	Hrtrt14	Heart rate QTL 14	3.56232		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	12	1	38687564	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
61331	Eau2	Experimental allergic uveoretinitis QTL 2		0.0005	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	12	1	33700600	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
1581516	Cm56	Cardiac mass QTL 56	4.2	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	11869600	16966542	Rat
61334	Gluco17	Glucose level QTL 17	6.3		adipocyte glucose uptake trait (VT:0004185)	adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)	12	1	16966671	Rat
2293684	Bmd26	Bone mineral density QTL 26	4.4	0.0002	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	12	1	38635130	Rat
6893681	Bw109	Body weight QTL 109	2.3	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28133365	Rat
1300174	Bw15	Body weight QTL 15	2.93		body mass (VT:0001259)	body weight loss (CMO:0001399)	12	1	28606299	Rat
1331787	Rf41	Renal function QTL 41	2.998		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	12	1	33700556	Rat
724526	Uae3	Urinary albumin excretion QTL 3	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	12	1	15486827	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
7204484	Bp358	Blood pressure QTL 358		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	1	24849755	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	41361854	Rat
1298081	Cia25	Collagen induced arthritis QTL 25	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	2747694	47747694	Rat
2303568	Bw88	Body weight QTL 88	3		body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28606299	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	3087180	48087180	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2293086	Iddm30	Insulin dependent diabetes mellitus QTL 30	3.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	7901625	33938215	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat

Markers in Region

RH127449

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	7,156,728 - 7,156,936 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	8,741,580 - 8,741,787	NCBI	Rnor6.0
Rnor_5.0	12	10,858,257 - 10,858,464	UniSTS	Rnor5.0
RGSC_v3.4	12	7,714,933 - 7,715,140	UniSTS	RGSC3.4
Celera	12	8,900,644 - 8,900,851	UniSTS
RH 3.4 Map	12	73.5	UniSTS
Cytogenetic Map	12	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	92	59	6	355	192	11	138	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC091179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ218873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000001243 ⟹ ENSRNOP00000001243

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	12,176,807 - 12,193,255 (+)	Ensembl
mRatBN7.2 Ensembl	12	7,140,668 - 7,157,092 (+)	Ensembl
Rnor_6.0 Ensembl	12	8,725,517 - 8,741,951 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000150698 ⟹ ENSRNOP00000106055

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	12,182,998 - 12,193,255 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154078 ⟹ ENSRNOP00000099276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	12,176,810 - 12,193,255 (+)	Ensembl

RefSeq Acc Id:

NM_001024968 ⟹ NP_001020139

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	12,176,834 - 12,193,256 (+)	NCBI
mRatBN7.2	12	7,140,668 - 7,157,093 (+)	NCBI
Rnor_6.0	12	8,725,536 - 8,741,944 (+)	NCBI
Rnor_5.0	12	10,842,174 - 10,858,621 (+)	NCBI
RGSC_v3.4	12	7,698,889 - 7,715,296 (+)	RGD
Celera	12	8,884,584 - 8,901,010 (+)	RGD

Sequence:

show sequence

CGGCGACCGAGCCACCACTAGGGCCCAAAGAACCAGAGTGCAGCGAAGCGGGGAGCGGAGGAGA
CTGAGTCCAGGGCCACTAAAGCCCCGGAGGTGTGCTTATCTATCTTTGGCTTCTAACAGACCTC
CAGTGTCCCGTTCCAAGGGACGTCCCCCTCTCGCGGTCCAGTCCACCTCTCTGCCCTGTCCTTT
GGCTGTCCCCAGCTGGAAAACCGTGCTGAAAAGACGGGGGCCGCTGCGCCCCGCACTGGGTAAC
CGAGAACACAGTGCTGAGCTCGGTCCAACCTGTGCCGTGCCTAGCAGGAAGACCTTAACCGTGG
GACTCCACCAGCCCGCTTGAGCAGATATGAAGATCTCATTCATCGAGCCCGCCATTCTCCTTTA
CGCCTTTGCTATGACGCTGACCATCCCGCTGACAGCGCAGTATGTGTACCGGAGGATATGGGAA
GAAACCGGTAACTACACCTTTACCTCCAGTAGCAATGTCTCTGAATGCGAGCAAAACAAAAGCA
GTTCCACCTTTGCATTCCAGGAGGAAGTTCAGAAAAAGGCATCTCTCTTCAGCCTGCAGGTGGA
AATAAGTGGGTTAATTCCTGGTCTAGTGTCTACCTTCATGCTTTTATCGAGTAGCGACAACCAC
GGACGGAAACTTCCCATGGTCCTGTCATCTCTTGGCTCTCTGGGAACCAACCTTTGGCTGTGTG
CGATGTCCTACTTTGACCTTCCCCTCCAGCTTCTGGTAGCATCCACCTTTATTGGCGCCCTCTT
TGGGAATTACACCACGTTCTGGGGAGCTTGCTTCGCCTACATTGTGGATCAGGAGAAAGAATAC
AAGCACAGAATCATCCGCATAGCCGTCCTGGATTTTATGCTGGGAGTCGTTACTGGGCTAACAG
GCCTGTCGTCTGGCTATTTCATCCGAGAGCTGGGTTTTGCGTGGTCCTATTTCATTATTGCCGT
AGTTGTTCTAGTCAACCTGGCCTACATTCTATTTTTCCTCAGTGATCCCATAAAGGAGTCTTCA
TCTCAGATAGTCACTATGTCCTGTAGTGAAAGCCTCAAGGACCTATTTTACCGGACTTACATGC
TGTTTAAAAATGGTTCCTGTAAGCGGCGTTCTTTGCTCTGTCTGCTGATTTTTACCCTTGTCGT
CTATTTTTTTGTGGTCTTCGGCATCACCCCGGTTTTCACACTCTATGAGCTGGGTCCTCCGCTC
TGCTGGAATGAGGTCTACATAGGCTATGGCTCAGCTTTGGGCAGCCTCTCCTTCCTGAGTAGTT
TCCTGGGCATCTGGCTGTTCTCTTACTGTTTGAAGGATATTCACATCGCCTATGTCGGCATTTT
TACCACGATGGTGGGAATGATGCTCACCGCCTTCACCAGGACCACTCTGATGATGTTTTTAGTC
CGAATATCGTTCTTTTTCACCATCATGCCACTTTCCATTCTGAGGTCCATGCTGTCAAAGGTGG
TCCACTCAACGGAACAAGGTGTGCTGTTTGCTTGCATAGCTTTCTTAGAAACGCTTGGCGGCGT
CACTTCGACCTCGGCGTATAATGGGATTTATTCAGCCACTGTTGCCTGGTACCCTGGGTTCGTC
TTCCTGCTGTCCGCTGGCCTCCTGGTCCTCCCAGCCGTCAGTCTCTGCATGGTCAAATGCATTG
GCTGGGAAGAGGGAAGCTATACACTGCTCATCCATGACGAGCCCAGTGAGCACACATCAGACTC
GTGACAGCAGCAATGCACACGCCCTGTGTGCGACTCCTGAAGAACTGCGACTCCTGAAGAACTG
CTCCGCAGTCAGTATTTCACTAGCGATCCACGTGACAAAACCCTGTCTCCAACCAAGTGAGTTG
GGAGGACACACCGAGCTCTGCTGCTTCTGGGGCCACCCAGCAGCACACTGGGTTCTTCAAAGAG
CAGACCCCAGTACCGTCCTCACTTCTCCATGGACCAGAGAAACACAGTGGAGAGCAGAGGAATG
CTTGCGAAACCTTGCTAAAACTTTAAAGCAATAACTTCACTGACATGCTCCAGTCTCCCATGAG
GAGACTAAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGCCTCTCAGGGA
TTTTTTTGAAGACACAATGAGGAATTTTTATTTGCAATAATCACTGAAATGGAAATGTCTCAGG
CATTTCTAGTTCTTCCTGGACTTGACTGACGTTTCAAGAGCCTGTCAAGGCTTTACTAATGGAA
TGAAAAATGAAGCACCTTTTAAAATGTGTTTTTCATTTTTCCTAGTGTTTTATTCTGTGACAAG
CCTGATGATGTTTTTATATGTAATGAAGGGGGTGGGTAGAAAATCAGATTATAAATAAAATCGT
CCTAATGTGAAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

hide sequence

RefSeq Acc Id:

XM_006248833 ⟹ XP_006248895

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	12,176,776 - 12,193,256 (+)	NCBI
mRatBN7.2	12	7,140,610 - 7,157,089 (+)	NCBI
Rnor_6.0	12	8,725,479 - 8,741,944 (+)	NCBI
Rnor_5.0	12	10,842,174 - 10,858,621 (+)	NCBI

Sequence:

show sequence

GGAGGCGGGTGGCAGCTCGGGCCGAAGATTACCACCTCCAAGCCGAGTGATGATGCTCGGCGAC
CGAGCCACCACTAGGGCCCAAAGAACCAGAGTGCAGCGAAGCGGGGAGCGGAGGAGACTGAGTC
CAGGGCCACTAAAGCCCCGGAGACTCCACCAGCCCGCTTGAGCAGATATGAAGATCTCATTCAT
CGAGCCCGCCATTCTCCTTTACGCCTTTGCTATGACGCTGACCATCCCGCTGACAGCGCAGTAT
GTGTACCGGAGGATATGGGAAGAAACCGGTAACTACACCTTTACCTCCAGTAGCAATGTCTCTG
AATGCGAGCAAAACAAAAGCAGTTCCACCTTTGCATTCCAGGAGGAAGTTCAGAAAAAGGCATC
TCTCTTCAGCCTGCAGGTGGAAATAAGTGGGTTAATTCCTGGTCTAGTGTCTACCTTCATGCTT
TTATCGAGTAGCGACAACCACGGACGGAAACTTCCCATGGTCCTGTCATCTCTTGGCTCTCTGG
GAACCAACCTTTGGCTGTGTGCGATGTCCTACTTTGACCTTCCCCTCCAGCTTCTGGTAGCATC
CACCTTTATTGGCGCCCTCTTTGGGAATTACACCACGTTCTGGGGAGCTTGCTTCGCCTACATT
GTGGATCAGGAGAAAGAATACAAGCACAGAATCATCCGCATAGCCGTCCTGGATTTTATGCTGG
GAGTCGTTACTGGGCTAACAGGCCTGTCGTCTGGCTATTTCATCCGAGAGCTGGGTTTTGCGTG
GTCCTATTTCATTATTGCCGTAGTTGTTCTAGTCAACCTGGCCTACATTCTATTTTTCCTCAGT
GATCCCATAAAGGAGTCTTCATCTCAGATAGTCACTATGTCCTGTAGTGAAAGCCTCAAGGACC
TATTTTACCGGACTTACATGCTGTTTAAAAATGGTTCCTGTAAGCGGCGTTCTTTGCTCTGTCT
GCTGATTTTTACCCTTGTCGTCTATTTTTTTGTGGTCTTCGGCATCACCCCGGTTTTCACACTC
TATGAGCTGGGTCCTCCGCTCTGCTGGAATGAGGTCTACATAGGCTATGGCTCAGCTTTGGGCA
GCCTCTCCTTCCTGAGTAGTTTCCTGGGCATCTGGCTGTTCTCTTACTGTTTGAAGGATATTCA
CATCGCCTATGTCGGCATTTTTACCACGATGGTGGGAATGATGCTCACCGCCTTCACCAGGACC
ACTCTGATGATGTTTTTAGTCCGAATATCGTTCTTTTTCACCATCATGCCACTTTCCATTCTGA
GGTCCATGCTGTCAAAGGTGGTCCACTCAACGGAACAAGGTGTGCTGTTTGCTTGCATAGCTTT
CTTAGAAACGCTTGGCGGCGTCACTTCGACCTCGGCGTATAATGGGATTTATTCAGCCACTGTT
GCCTGGTACCCTGGGTTCGTCTTCCTGCTGTCCGCTGGCCTCCTGGTCCTCCCAGCCGTCAGTC
TCTGCATGGTCAAATGCATTGGCTGGGAAGAGGGAAGCTATACACTGCTCATCCATGACGAGCC
CAGTGAGCACACATCAGACTCGTGACAGCAGCAATGCACACGCCCTGTGTGCGACTCCTGAAGA
ACTGCGACTCCTGAAGAACTGCTCCGCAGTCAGTATTTCACTAGCGATCCACGTGACAAAACCC
TGTCTCCAACCAAGTGAGTTGGGAGGACACACCGAGCTCTGCTGCTTCTGGGGCCACCCAGCAG
CACACTGGGTTCTTCAAAGAGCAGACCCCAGTACCGTCCTCACTTCTCCATGGACCAGAGAAAC
ACAGTGGAGAGCAGAGGAATGCTTGCGAAACCTTGCTAAAACTTTAAAGCAATAACTTCACTGA
CATGCTCCAGTCTCCCATGAGGAGACTAAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATG
GGCTTGCTGGCCTCTCAGGGATTTTTTTGAAGACACAATGAGGAATTTTTATTTGCAATAATCA
CTGAAATGGAAATGTCTCAGGCATTTCTAGTTCTTCCTGGACTTGACTGACGTTTCAAGAGCCT
GTCAAGGCTTTACTAATGGAATGAAAAATGAAGCACCTTTTAAAATGTGTTTTTCATTTTTCCT
AGTGTTTTATTCTGTGACAAGCCTGATGATGTTTTTATATGTAATGAAGGGGGTGGGTAGAAAA
TCAGATTATAAATAAAATCGTCCTAATGTGAAAACTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001020139	(Get FASTA)	NCBI Sequence Viewer
	XP_006248895	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91179	(Get FASTA)	NCBI Sequence Viewer
	EDL89550	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000001243
	ENSRNOP00000001243.4
	ENSRNOP00000106055
GenBank Protein	Q5BK75	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001020139 ⟸ NM_001024968
- Peptide Label:	precursor
- UniProtKB:	Q5BK75 (UniProtKB/Swiss-Prot), A6K192 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKISFIEPAILLYAFAMTLTIPLTAQYVYRRIWEETGNYTFTSSSNVSECEQNKSSSTFAFQEE VQKKASLFSLQVEISGLIPGLVSTFMLLSSSDNHGRKLPMVLSSLGSLGTNLWLCAMSYFDLPL QLLVASTFIGALFGNYTTFWGACFAYIVDQEKEYKHRIIRIAVLDFMLGVVTGLTGLSSGYFIR ELGFAWSYFIIAVVVLVNLAYILFFLSDPIKESSSQIVTMSCSESLKDLFYRTYMLFKNGSCKR RSLLCLLIFTLVVYFFVVFGITPVFTLYELGPPLCWNEVYIGYGSALGSLSFLSSFLGIWLFSY CLKDIHIAYVGIFTTMVGMMLTAFTRTTLMMFLVRISFFFTIMPLSILRSMLSKVVHSTEQGVL FACIAFLETLGGVTSTSAYNGIYSATVAWYPGFVFLLSAGLLVLPAVSLCMVKCIGWEEGSYTL LIHDEPSEHTSDS hide sequence

RefSeq Acc Id:	XP_006248895 ⟸ XM_006248833
- Peptide Label:	isoform X1
- UniProtKB:	Q5BK75 (UniProtKB/Swiss-Prot), A6K192 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKISFIEPAILLYAFAMTLTIPLTAQYVYRRIWEETGNYTFTSSSNVSECEQNKSSSTFAFQEE VQKKASLFSLQVEISGLIPGLVSTFMLLSSSDNHGRKLPMVLSSLGSLGTNLWLCAMSYFDLPL QLLVASTFIGALFGNYTTFWGACFAYIVDQEKEYKHRIIRIAVLDFMLGVVTGLTGLSSGYFIR ELGFAWSYFIIAVVVLVNLAYILFFLSDPIKESSSQIVTMSCSESLKDLFYRTYMLFKNGSCKR RSLLCLLIFTLVVYFFVVFGITPVFTLYELGPPLCWNEVYIGYGSALGSLSFLSSFLGIWLFSY CLKDIHIAYVGIFTTMVGMMLTAFTRTTLMMFLVRISFFFTIMPLSILRSMLSKVVHSTEQGVL FACIAFLETLGGVTSTSAYNGIYSATVAWYPGFVFLLSAGLLVLPAVSLCMVKCIGWEEGSYTL LIHDEPSEHTSDS hide sequence

Ensembl Acc Id:

ENSRNOP00000001243 ⟸ ENSRNOT00000001243

Ensembl Acc Id:

ENSRNOP00000099276 ⟸ ENSRNOT00000154078

Ensembl Acc Id:

ENSRNOP00000106055 ⟸ ENSRNOT00000150698

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BK75-F1-model_v2	AlphaFold	Q5BK75	1-461	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698397

Promoter ID:

EPDNEW_R8922

Type:

initiation region

Name:

Slc46a3_1

Description:

solute carrier family 46, member 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	12	8,725,523 - 8,725,583	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307594	AgrOrtholog
BioCyc Gene	G2FUF-20127	BioCyc
Ensembl Genes	ENSRNOG00000000937	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000001243	ENTREZGENE
	ENSRNOT00000001243.7	UniProtKB/Swiss-Prot
	ENSRNOT00000150698	ENTREZGENE
Gene3D-CATH	1.20.1250.20	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7325773	IMAGE-MGC_LOAD
InterPro	MFS	UniProtKB/Swiss-Prot
	MFS_trans_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:288454	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:108818	IMAGE-MGC_LOAD
NCBI Gene	288454	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 46 MEMBER 3	UniProtKB/Swiss-Prot
	ZGC:174356	UniProtKB/Swiss-Prot
Pfam	MFS_1	UniProtKB/Swiss-Prot
PhenoGen	Slc46a3	PhenoGen
RatGTEx	ENSRNOG00000000937	RatGTEx
Superfamily-SCOP	SSF103473	UniProtKB/Swiss-Prot
UniProt	A0ABK0L4V6_RAT	UniProtKB/TrEMBL
	A0ABK0LKB3_RAT	UniProtKB/TrEMBL
	A6K192	ENTREZGENE, UniProtKB/TrEMBL
	Q5BK75	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Slc46a3	solute carrier family 46, member 3	RGD1307594	similar to RIKEN cDNA 1200006F02	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1307594	similar to RIKEN cDNA 1200006F02	RGD1307594_predicted	similar to RIKEN cDNA 1200006F02 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1307594_predicted	similar to RIKEN cDNA 1200006F02 (predicted)	LOC288454_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC288454_predicted	similar to RIKEN cDNA 1200006F02 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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