Zfp521 (zinc finger protein 521) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Zfp521 (zinc finger protein 521) Rattus norvegicus
Analyze
Symbol: Zfp521
Name: zinc finger protein 521
RGD ID: 1307345
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and protein domain specific binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to act upstream of or within neuron fate commitment. Predicted to be located in nucleus. Orthologous to human ZNF521 (zinc finger protein 521); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC307579; Znf521
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8185,050,297 - 5,343,188 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl185,056,236 - 5,343,054 (-)EnsemblGRCr8
mRatBN7.2184,775,952 - 5,068,592 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl184,787,295 - 5,068,458 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx185,005,649 - 5,287,716 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0185,793,291 - 6,075,378 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,052,734 - 5,334,363 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0185,022,042 - 5,315,242 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl185,032,029 - 5,314,585 (-)Ensemblrn6Rnor6.0
Rnor_5.0185,006,330 - 5,165,477 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4184,986,104 - 5,148,485 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera184,826,586 - 5,105,763 (-)NCBICelera
RGSC_v3.1184,986,099 - 5,271,638 (-)NCBI
Cytogenetic Map18p13NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
3-methylcholanthrene  (ISO)
4-hydroxyphenyl retinamide  (ISO)
7,12-dimethyltetraphene  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (EXP)
chloroprene  (ISO)
clothianidin  (ISO)
cobalt dichloride  (ISO)
Cuprizon  (EXP)
D-glucose  (ISO)
dexamethasone  (ISO)
dibenz[a,h]anthracene  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
folic acid  (ISO)
fucoxanthin  (ISO)
furan  (EXP)
gemcitabine  (ISO)
genistein  (EXP)
gentamycin  (EXP)
glucose  (ISO)
lipopolysaccharide  (ISO)
melphalan  (ISO)
mercury dibromide  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
Moniliformin  (ISO)
nickel atom  (ISO)
O-methyleugenol  (ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP)
PCB138  (EXP)
pentanal  (ISO)
phenylmercury acetate  (ISO)
pioglitazone  (ISO)
pirinixic acid  (ISO)
progesterone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sevoflurane  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sulforaphane  (ISO)
testosterone  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA,ISO)
nucleus  (IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11984006   PMID:12393497   PMID:25834056   PMID:28707663  


Genomics

Comparative Map Data
Zfp521
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8185,050,297 - 5,343,188 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl185,056,236 - 5,343,054 (-)EnsemblGRCr8
mRatBN7.2184,775,952 - 5,068,592 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl184,787,295 - 5,068,458 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx185,005,649 - 5,287,716 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0185,793,291 - 6,075,378 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,052,734 - 5,334,363 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0185,022,042 - 5,315,242 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl185,032,029 - 5,314,585 (-)Ensemblrn6Rnor6.0
Rnor_5.0185,006,330 - 5,165,477 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4184,986,104 - 5,148,485 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera184,826,586 - 5,105,763 (-)NCBICelera
RGSC_v3.1184,986,099 - 5,271,638 (-)NCBI
Cytogenetic Map18p13NCBI
ZNF521
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381825,061,924 - 25,352,166 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1825,061,924 - 25,352,194 (-)Ensemblhg38GRCh38
GRCh371822,641,888 - 22,932,130 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361820,895,889 - 21,186,114 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341820,895,888 - 21,186,114NCBI
Celera1819,457,304 - 19,745,858 (-)NCBICelera
Cytogenetic Map18q11.2NCBI
HuRef1819,498,620 - 19,787,560 (-)NCBIHuRef
CHM1_11822,568,594 - 22,858,896 (-)NCBICHM1_1
T2T-CHM13v2.01825,256,507 - 25,546,798 (-)NCBIT2T-CHM13v2.0
Zfp521
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391813,820,070 - 14,105,812 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1813,820,070 - 14,105,844 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381813,687,013 - 13,972,749 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1813,687,013 - 13,972,787 (-)Ensemblmm10GRCm38
MGSCv371813,845,522 - 14,131,242 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361813,831,384 - 14,115,932 (-)NCBIMGSCv36mm8
Celera1813,916,487 - 14,200,147 (-)NCBICelera
Cytogenetic Map18A1NCBI
cM Map187.68NCBI
Znf521
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540213,299,432 - 13,571,898 (-)Ensembl
ChiLan1.0NW_00495540213,299,670 - 13,570,188 (-)NCBIChiLan1.0ChiLan1.0
ZNF521
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21742,492,748 - 42,784,198 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11828,185,342 - 28,476,796 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01818,319,311 - 18,611,564 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11821,930,832 - 22,220,607 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1822,062,675 - 22,220,607 (-)EnsemblpanPan2panpan1.1
ZNF521
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1763,146,696 - 63,421,790 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl763,146,690 - 63,421,792 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha762,588,683 - 62,863,819 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0763,196,796 - 63,473,255 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl763,195,842 - 63,473,243 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1762,869,901 - 63,144,909 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0762,883,806 - 63,158,788 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0763,187,769 - 63,463,157 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Znf521
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494459,217,012 - 59,486,169 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365504,330,695 - 4,572,028 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365504,329,911 - 4,599,052 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF521
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6109,833,614 - 110,124,798 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.16109,833,610 - 110,122,920 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26102,988,148 - 103,009,488 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF521
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11855,189,003 - 55,482,150 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1855,188,366 - 55,482,211 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605029,929,664 - 30,222,618 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf521
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247707,025,544 - 7,264,606 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247707,025,678 - 7,264,481 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Znf521
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11529,809,889 - 30,092,711 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zfp521
1877 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:440
Count of miRNA genes:233
Interacting mature miRNAs:284
Transcripts:ENSRNOT00000022637
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18131610627Rat
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18126032889Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18144930869Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18125022372Rat
1331781Scl28Serum cholesterol level QTL 283.995blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)18125071266Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18115642423Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18381190230809809Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134566578Rat
6903345Bp349Blood pressure QTL 3493.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18126032889Rat
6903347Bp350Blood pressure QTL 3504.4arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18131610627Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18448264849482648Rat
6903349Bp351Blood pressure QTL 3513.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18154490981Rat
6903351Bp352Blood pressure QTL 3523.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)18391722648917226Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134566578Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)18430735449307354Rat

Markers in Region
AU048195  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2184,798,704 - 4,798,885 (+)MAPPERmRatBN7.2
Rnor_6.0185,044,260 - 5,044,440NCBIRnor6.0
Rnor_5.0185,018,561 - 5,018,741UniSTSRnor5.0
Celera184,837,981 - 4,838,161UniSTS
Cytogenetic Map18p13UniSTS
BE107765  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2184,899,434 - 4,899,598 (+)MAPPERmRatBN7.2
Rnor_6.0185,143,962 - 5,144,125NCBIRnor6.0
Rnor_5.0185,117,909 - 5,118,072UniSTSRnor5.0
RGSC_v3.4184,971,202 - 4,971,365UniSTSRGSC3.4
Celera184,938,454 - 4,938,617UniSTS
RH 3.4 Map1882.11UniSTS
Cytogenetic Map18p13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
15 12 67 163 90 89 58 54 58 6 314 154 11 142 79 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000022637   ⟹   ENSRNOP00000022637
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl185,061,918 - 5,343,054 (-)Ensembl
mRatBN7.2 Ensembl184,787,295 - 5,068,458 (-)Ensembl
Rnor_6.0 Ensembl185,032,029 - 5,314,511 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000079682   ⟹   ENSRNOP00000068573
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl185,056,236 - 5,343,043 (-)Ensembl
mRatBN7.2 Ensembl184,803,284 - 5,068,458 (-)Ensembl
Rnor_6.0 Ensembl185,046,826 - 5,314,585 (-)Ensembl
RefSeq Acc Id: NM_001107403   ⟹   NP_001100873
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,061,918 - 5,343,043 (-)NCBI
mRatBN7.2184,787,295 - 5,068,447 (-)NCBI
Rnor_6.0185,032,029 - 5,314,511 (-)NCBI
Rnor_5.0185,006,330 - 5,165,477 (-)NCBI
RGSC_v3.4184,986,104 - 5,148,485 (-)RGD
Celera184,826,586 - 5,105,763 (-)RGD
Sequence:
RefSeq Acc Id: NM_001393860   ⟹   NP_001380789
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,061,918 - 5,343,054 (-)NCBI
mRatBN7.2184,787,295 - 5,068,458 (-)NCBI
RefSeq Acc Id: XM_063277447   ⟹   XP_063133517
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,050,297 - 5,342,885 (-)NCBI
RefSeq Acc Id: XM_063277448   ⟹   XP_063133518
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,050,297 - 5,342,885 (-)NCBI
RefSeq Acc Id: XM_063277449   ⟹   XP_063133519
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,061,918 - 5,342,883 (-)NCBI
RefSeq Acc Id: XM_063277450   ⟹   XP_063133520
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,050,297 - 5,343,188 (-)NCBI
RefSeq Acc Id: XM_063277452   ⟹   XP_063133522
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,061,918 - 5,343,187 (-)NCBI
RefSeq Acc Id: XM_063277453   ⟹   XP_063133523
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8185,061,918 - 5,343,188 (-)NCBI
RefSeq Acc Id: NP_001100873   ⟸   NM_001107403
- Peptide Label: isoform 1
- UniProtKB: A6KLT4 (UniProtKB/TrEMBL),   A0A0G2JT53 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000068573   ⟸   ENSRNOT00000079682
Ensembl Acc Id: ENSRNOP00000022637   ⟸   ENSRNOT00000022637
RefSeq Acc Id: NP_001380789   ⟸   NM_001393860
- Peptide Label: isoform 2
- UniProtKB: D3ZQM2 (UniProtKB/TrEMBL),   A0A0G2JT53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133520   ⟸   XM_063277450
- Peptide Label: isoform X4
- UniProtKB: A0A0G2JT53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133518   ⟸   XM_063277448
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JT53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133517   ⟸   XM_063277447
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JT53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133523   ⟸   XM_063277453
- Peptide Label: isoform X6
- UniProtKB: A0A0G2JT53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133522   ⟸   XM_063277452
- Peptide Label: isoform X5
- UniProtKB: A6KLT5 (UniProtKB/TrEMBL),   A0A0G2JT53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133519   ⟸   XM_063277449
- Peptide Label: isoform X3
- UniProtKB: A6KLT4 (UniProtKB/TrEMBL),   A0A0G2JT53 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JT53-F1-model_v2 AlphaFold A0A0G2JT53 1-1325 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700644
Promoter ID:EPDNEW_R11167
Type:single initiation site
Name:Zfp521_1
Description:zinc finger protein 521
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0185,314,416 - 5,314,476EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307345 AgrOrtholog
BioCyc Gene G2FUF-8332 BioCyc
Ensembl Genes ENSRNOG00000016874 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022637 ENTREZGENE
  ENSRNOT00000022637.8 UniProtKB/TrEMBL
  ENSRNOT00000079682 ENTREZGENE
  ENSRNOT00000079682.3 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:307579 UniProtKB/TrEMBL
NCBI Gene 307579 ENTREZGENE
PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  C2H2-TYPE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  KRAB AND ZINC FINGER DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
  zf-met UniProtKB/TrEMBL
PhenoGen Zfp521 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016874 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0G2JT53 ENTREZGENE, UniProtKB/TrEMBL
  A6KLT4 ENTREZGENE, UniProtKB/TrEMBL
  A6KLT5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZQM2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-19 Zfp521  zinc finger protein 521  Znf521  zinc finger protein 521  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Znf521  zinc finger protein 521  Zfp521  zinc finger protein 521   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Zfp521  zinc finger protein 521   Zfp521_predicted  zinc finger protein 521 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Zfp521_predicted  zinc finger protein 521 (predicted)      Symbol and Name status set to approved 70820 APPROVED