Tenm3 (teneurin transmembrane protein 3) - Rat Genome Database

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Gene: Tenm3 (teneurin transmembrane protein 3) Rattus norvegicus
Analyze
Symbol: Tenm3
Name: teneurin transmembrane protein 3
RGD ID: 1306641
Description: Predicted to enable cell adhesion molecule binding activity; protein heterodimerization activity; and protein homodimerization activity. Predicted to be involved in several processes, including homophilic cell adhesion via plasma membrane adhesion molecules; regulation of homophilic cell adhesion; and synaptic membrane adhesion. Predicted to be located in plasma membrane. Predicted to be active in glutamatergic synapse; neuron projection; and presynaptic active zone membrane. Human ortholog(s) of this gene implicated in cocaine dependence. Orthologous to human TENM3 (teneurin transmembrane protein 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC103693952; LOC306451; odd Oz/ten-m homolog 3; odd Oz/ten-m homolog 3 (Drosophila); odz, odd Oz/ten-m homolog 3; odz, odd Oz/ten-m homolog 3 (Drosophila); odz, odd Oz/ten-m homolog 3-like; Odz3; teneurin-3; uncharacterized LOC103693952
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81647,984,732 - 50,711,352 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1649,829,750 - 50,711,352 (+)EnsemblGRCr8
mRatBN7.21641,251,909 - 43,978,594 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1641,252,182 - 43,978,594 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1648,938,379 - 49,382,048 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01652,298,931 - 52,742,613 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01647,588,478 - 48,031,955 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01646,422,676 - 46,929,023 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1646,731,403 - 46,926,245 (+)Ensemblrn6Rnor6.0
Rnor_5.01645,990,922 - 46,657,495 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41646,648,771 - 47,149,524 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1641,552,578 - 41,996,819 (+)NCBICelera
RGSC_v3.11646,648,894 - 47,146,821 (+)NCBI
Cytogenetic Map16q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-bromohexadecanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amiodarone  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
bisphenol F  (ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP)
cocaine  (ISO)
decabromodiphenyl ether  (ISO)
dichloroacetic acid  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
folic acid  (ISO)
fulvestrant  (ISO)
furan  (EXP)
glyphosate  (EXP)
L-methionine  (ISO)
lead diacetate  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (EXP,ISO)
menadione  (ISO)
methapyrilene  (ISO)
methimazole  (EXP)
methoxychlor  (EXP)
N,N-diethyl-m-toluamide  (EXP)
nickel sulfate  (ISO)
paracetamol  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
tetrachloromethane  (EXP,ISO)
thiram  (ISO)
titanium dioxide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
triticonazole  (EXP)
valproic acid  (EXP,ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Substance dependence low-density whole genome association study in two distinct American populations. Yu Y, etal., Hum Genet. 2008 Jun;123(5):495-506. doi: 10.1007/s00439-008-0501-0. Epub 2008 Apr 26.
Additional References at PubMed
PMID:12000766   PMID:17478416   PMID:17803360   PMID:22766609   PMID:23028443   PMID:29414938  


Genomics

Comparative Map Data
Tenm3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81647,984,732 - 50,711,352 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1649,829,750 - 50,711,352 (+)EnsemblGRCr8
mRatBN7.21641,251,909 - 43,978,594 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1641,252,182 - 43,978,594 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1648,938,379 - 49,382,048 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01652,298,931 - 52,742,613 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01647,588,478 - 48,031,955 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01646,422,676 - 46,929,023 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1646,731,403 - 46,926,245 (+)Ensemblrn6Rnor6.0
Rnor_5.01645,990,922 - 46,657,495 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41646,648,771 - 47,149,524 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1641,552,578 - 41,996,819 (+)NCBICelera
RGSC_v3.11646,648,894 - 47,146,821 (+)NCBI
Cytogenetic Map16q11NCBI
TENM3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384181,447,613 - 182,803,024 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4182,143,918 - 182,803,024 (+)Ensemblhg38GRCh38
GRCh374183,065,116 - 183,724,177 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364183,482,131 - 183,961,171 (+)NCBIBuild 36Build 36hg18NCBI36
Build 344183,539,732 - 183,969,496NCBI
Celera4180,576,661 - 181,055,801 (+)NCBICelera
Cytogenetic Map4q34.3-q35.1NCBI
HuRef4179,000,986 - 179,481,448 (+)NCBIHuRef
CHM1_14183,221,672 - 183,700,754 (+)NCBICHM1_1
T2T-CHM13v2.04184,789,727 - 186,144,894 (+)NCBIT2T-CHM13v2.0
Tenm3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39848,678,700 - 51,370,255 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl848,680,717 - 49,296,986 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38848,225,665 - 49,522,824 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl848,227,682 - 48,843,951 (-)Ensemblmm10GRCm38
MGSCv37849,311,019 - 49,760,044 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36849,726,501 - 50,173,507 (-)NCBIMGSCv36mm8
Celera850,895,477 - 51,344,899 (-)NCBICelera
Cytogenetic Map8B1.2- B1.3NCBI
cM Map827.02NCBI
Tenm3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540325,923,750 - 26,365,894 (-)Ensembl
ChiLan1.0NW_00495540325,920,919 - 26,534,817 (-)NCBIChiLan1.0ChiLan1.0
TENM3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23177,814,108 - 180,549,529 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14178,975,800 - 180,909,640 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04173,644,674 - 174,993,218 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14186,559,404 - 187,215,170 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4186,738,624 - 187,214,394 (+)EnsemblpanPan2panpan1.1
TENM3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11647,440,673 - 47,883,311 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1647,441,348 - 48,044,322 (-)NCBIcanFam3CanFam3.1
CanFam3.1 Ensembl1647,441,348 - 48,044,322 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3435,883,742 - 36,484,794 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01649,668,415 - 50,270,109 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1649,667,658 - 50,270,179 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11647,632,059 - 48,232,872 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01648,244,814 - 48,846,192 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01648,385,358 - 48,987,162 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tenm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494331,100,860 - 31,929,099 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365546,183,722 - 6,619,982 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365546,180,883 - 6,871,178 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TENM3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1543,540,375 - 44,399,711 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11541,818,190 - 44,401,747 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21550,292,659 - 50,995,047 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TENM3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17127,231,840 - 128,792,832 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7128,598,835 - 128,795,211 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037107,641,371 - 108,986,958 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tenm3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476913,104,585 - 13,579,136 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476912,831,899 - 13,579,957 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tenm3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11339,188,831 - 39,792,459 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tenm3
16464 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:310
Count of miRNA genes:185
Interacting mature miRNAs:235
Transcripts:ENSRNOT00000017624
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)163692878281928782Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)164199206486992064Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162846870173468701Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)163236104377361043Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16423421253708481Rat
631833Sach2Saccharin preference QTL 240.01consumption behavior trait (VT:0002069)calculated saccharin drink intake rate (CMO:0001613)164975766656898388Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16474422249744222Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)163188527176885271Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)164445512389455123Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)164445512389455123Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16435482249354822Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16423421249757901Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164909919691442908Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)163105803976058039Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)163439829479398294Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338679049757901Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161773081872536785Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)161590580260905802Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683908652786090Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16330168348301683Rat

Markers in Region
D18Got81  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21851,122,703 - 51,122,884 (-)MAPPERmRatBN7.2
Rnor_6.01646,546,073 - 46,546,253NCBIRnor6.0
Rnor_5.01646,278,202 - 46,278,382UniSTSRnor5.0
RGSC_v3.41853,442,433 - 53,442,614RGDRGSC3.4
RGSC_v3.41853,442,434 - 53,442,614UniSTSRGSC3.4
Celera1849,253,062 - 49,253,242UniSTS
RGSC_v3.11853,503,197 - 53,503,378RGD
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg5  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,553,792 - 43,554,013 (+)MAPPERmRatBN7.2
Rnor_6.01646,448,829 - 46,449,049NCBIRnor6.0
Rnor_5.01646,182,271 - 46,182,491UniSTSRnor5.0
RGSC_v3.41646,688,259 - 46,688,479UniSTSRGSC3.4
Celera1641,579,104 - 41,579,320UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg15  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,829,778 - 43,830,026 (+)MAPPERmRatBN7.2
Rnor_6.01646,779,260 - 46,779,507NCBIRnor6.0
Rnor_5.01646,510,121 - 46,510,368UniSTSRnor5.0
RGSC_v3.41646,994,593 - 46,994,840UniSTSRGSC3.4
Celera1641,853,683 - 41,853,930UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg11  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,686,521 - 43,686,825 (+)MAPPERmRatBN7.2
Rnor_6.01646,634,544 - 46,634,847NCBIRnor6.0
Rnor_5.01646,366,431 - 46,366,734UniSTSRnor5.0
RGSC_v3.41646,847,066 - 46,847,369UniSTSRGSC3.4
Celera1641,711,017 - 41,711,320UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg13  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,824,400 - 43,824,694 (+)MAPPERmRatBN7.2
Rnor_6.01646,773,881 - 46,774,174NCBIRnor6.0
Rnor_5.01646,504,742 - 46,505,035UniSTSRnor5.0
RGSC_v3.41646,989,526 - 46,989,819UniSTSRGSC3.4
Celera1641,848,308 - 41,848,601UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg10  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,618,229 - 43,618,508 (+)MAPPERmRatBN7.2
Rnor_6.01646,566,359 - 46,566,637NCBIRnor6.0
Rnor_5.01646,298,488 - 46,298,766UniSTSRnor5.0
RGSC_v3.41646,778,459 - 46,778,737UniSTSRGSC3.4
Celera1641,642,529 - 41,642,807UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg9  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,599,906 - 43,600,121 (+)MAPPERmRatBN7.2
Rnor_6.01646,494,739 - 46,494,953NCBIRnor6.0
Rnor_5.01646,228,181 - 46,228,395UniSTSRnor5.0
RGSC_v3.41646,760,137 - 46,760,351UniSTSRGSC3.4
Celera1641,624,232 - 41,624,446UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg8  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,594,456 - 43,594,666 (+)MAPPERmRatBN7.2
Rnor_6.01646,489,292 - 46,489,498NCBIRnor6.0
Rnor_5.01646,222,734 - 46,222,940UniSTSRnor5.0
RGSC_v3.41646,754,690 - 46,754,896UniSTSRGSC3.4
Celera1641,618,785 - 41,618,991UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg7  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01646,476,345 - 46,476,588NCBIRnor6.0
Rnor_5.01646,209,787 - 46,210,030UniSTSRnor5.0
RGSC_v3.41646,715,585 - 46,715,828UniSTSRGSC3.4
Celera1641,606,483 - 41,606,653UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg16  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,947,081 - 43,947,199 (+)MAPPERmRatBN7.2
Rnor_6.01646,898,129 - 46,898,246NCBIRnor6.0
Rnor_5.01646,626,601 - 46,626,718UniSTSRnor5.0
RGSC_v3.41647,115,926 - 47,116,043UniSTSRGSC3.4
RGSC_v3.41647,005,869 - 47,005,986UniSTSRGSC3.4
Celera1641,970,211 - 41,970,341UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg6  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,574,067 - 43,574,225 (+)MAPPERmRatBN7.2
Rnor_6.01646,469,292 - 46,469,449NCBIRnor6.0
Rnor_5.01646,202,734 - 46,202,891UniSTSRnor5.0
RGSC_v3.41646,708,532 - 46,708,689UniSTSRGSC3.4
Celera1641,599,431 - 41,599,588UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg18  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,892,657 - 43,892,815 (+)MAPPERmRatBN7.2
Rnor_6.01646,841,870 - 46,842,027NCBIRnor6.0
Rnor_5.01646,573,167 - 46,573,324UniSTSRnor5.0
RGSC_v3.41647,060,270 - 47,060,427UniSTSRGSC3.4
Celera1641,916,355 - 41,916,518UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg17  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,865,402 - 43,865,563 (+)MAPPERmRatBN7.2
Rnor_6.01646,814,464 - 46,814,624NCBIRnor6.0
Rnor_5.01646,545,761 - 46,545,921UniSTSRnor5.0
RGSC_v3.41647,032,557 - 47,032,717UniSTSRGSC3.4
Celera1641,889,306 - 41,889,466UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg14  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81650,559,515 - 50,560,017 (+)Marker Load Pipeline
mRatBN7.21643,826,747 - 43,827,249 (+)MAPPERmRatBN7.2
Rnor_6.01646,776,228 - 46,776,729NCBIRnor6.0
Rnor_5.01646,507,089 - 46,507,590UniSTSRnor5.0
RGSC_v3.41646,991,873 - 46,992,061UniSTSRGSC3.4
Celera1641,850,655 - 41,851,156UniSTS
Cytogenetic Map16q11UniSTS
D16Nkg12  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,811,881 - 43,812,059 (+)MAPPERmRatBN7.2
Rnor_6.01646,761,125 - 46,761,302NCBIRnor6.0
Rnor_5.01646,491,986 - 46,492,163UniSTSRnor5.0
RGSC_v3.41646,977,007 - 46,977,184UniSTSRGSC3.4
Celera1641,835,793 - 41,835,970UniSTS
Cytogenetic Map16q11UniSTS
AU047302  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21851,113,934 - 51,114,077 (-)MAPPERmRatBN7.2
Rnor_6.01646,554,877 - 46,555,019NCBIRnor6.0
Rnor_5.01646,287,006 - 46,287,148UniSTSRnor5.0
RGSC_v3.41853,433,668 - 53,433,810UniSTSRGSC3.4
Celera1849,244,296 - 49,244,438UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map16q11UniSTS
RH127800  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,930,704 - 43,930,904 (+)MAPPERmRatBN7.2
Rnor_6.01646,881,756 - 46,881,955NCBIRnor6.0
Rnor_5.01646,610,228 - 46,610,427UniSTSRnor5.0
RGSC_v3.41647,098,847 - 47,099,046UniSTSRGSC3.4
Celera1641,953,792 - 41,953,991UniSTS
RH 3.4 Map16400.4UniSTS
Cytogenetic Map16q11UniSTS
RH142817  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,598,669 - 43,598,773 (+)MAPPERmRatBN7.2
Rnor_6.01646,493,502 - 46,493,605NCBIRnor6.0
Rnor_5.01646,226,944 - 46,227,047UniSTSRnor5.0
RGSC_v3.41646,758,900 - 46,759,003UniSTSRGSC3.4
Celera1641,622,995 - 41,623,098UniSTS
RH 3.4 Map16400.7UniSTS
Cytogenetic Map16q11UniSTS
BE096987  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,619,317 - 43,619,514 (+)MAPPERmRatBN7.2
Rnor_6.01646,567,447 - 46,567,643NCBIRnor6.0
Rnor_5.01646,299,576 - 46,299,772UniSTSRnor5.0
RGSC_v3.41646,779,547 - 46,779,743UniSTSRGSC3.4
Celera1641,643,617 - 41,643,813UniSTS
RH 3.4 Map16401.2UniSTS
Cytogenetic Map16q11UniSTS
BF396733  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,953,171 - 43,953,417 (+)MAPPERmRatBN7.2
Rnor_6.01646,904,218 - 46,904,463NCBIRnor6.0
Rnor_5.01646,632,690 - 46,632,935UniSTSRnor5.0
RGSC_v3.41647,122,015 - 47,122,260UniSTSRGSC3.4
Celera1641,976,313 - 41,976,558UniSTS
RH 3.4 Map16399.7UniSTS
Cytogenetic Map16q11UniSTS
BE113619  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21643,975,924 - 43,976,104 (+)MAPPERmRatBN7.2
Rnor_6.01646,926,354 - 46,926,533NCBIRnor6.0
Rnor_5.01646,654,826 - 46,655,005UniSTSRnor5.0
RGSC_v3.41647,146,855 - 47,147,034UniSTSRGSC3.4
Celera1641,994,150 - 41,994,329UniSTS
RH 3.4 Map16400.1UniSTS
Cytogenetic Map16q11UniSTS
ha2758  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21851,110,499 - 51,111,133 (-)MAPPERmRatBN7.2
Rnor_6.01646,557,821 - 46,558,454NCBIRnor6.0
Rnor_5.01646,289,950 - 46,290,583UniSTSRnor5.0
Cytogenetic Map16q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 44 59 6 307 144 11 141 80 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001169133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006253115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008771244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008771245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039094517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063275424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000017624   ⟹   ENSRNOP00000017625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1650,098,850 - 50,711,352 (+)Ensembl
mRatBN7.2 Ensembl1643,359,754 - 43,978,594 (+)Ensembl
Rnor_6.0 Ensembl1646,731,403 - 46,926,245 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094358   ⟹   ENSRNOP00000076753
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1649,829,750 - 50,711,352 (+)Ensembl
mRatBN7.2 Ensembl1641,252,182 - 43,978,594 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105413   ⟹   ENSRNOP00000091422
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1649,829,750 - 50,711,352 (+)Ensembl
mRatBN7.2 Ensembl1641,252,182 - 43,978,594 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000137496   ⟹   ENSRNOP00000109669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1650,092,382 - 50,711,352 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000140066   ⟹   ENSRNOP00000111639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1649,829,750 - 50,711,352 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000160963   ⟹   ENSRNOP00000111017
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1649,829,750 - 50,711,352 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000168106   ⟹   ENSRNOP00000112352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1650,379,891 - 50,711,352 (+)Ensembl
RefSeq Acc Id: NM_001169133   ⟹   NP_001162604
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,260,789 - 50,711,352 (+)NCBI
mRatBN7.21643,527,994 - 43,978,594 (+)NCBI
Rnor_6.01646,423,869 - 46,929,023 (+)NCBI
Rnor_5.01645,990,922 - 46,657,495 (+)NCBI
RGSC_v3.41646,648,771 - 47,149,524 (+)RGD
Celera1641,552,578 - 41,996,819 (+)RGD
Sequence:
RefSeq Acc Id: XM_039094506   ⟹   XP_038950434
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
mRatBN7.21641,251,910 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094507   ⟹   XP_038950435
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
mRatBN7.21641,251,910 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094508   ⟹   XP_038950436
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,091,948 - 50,711,346 (+)NCBI
mRatBN7.21643,359,163 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094509   ⟹   XP_038950437
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,098,626 - 50,711,346 (+)NCBI
mRatBN7.21643,365,819 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094510   ⟹   XP_038950438
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
mRatBN7.21641,251,910 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094511   ⟹   XP_038950439
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
mRatBN7.21641,251,909 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094512   ⟹   XP_038950440
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
mRatBN7.21641,251,910 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094513   ⟹   XP_038950441
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
mRatBN7.21641,251,910 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094514   ⟹   XP_038950442
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,733 - 50,711,346 (+)NCBI
mRatBN7.21641,251,911 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094515   ⟹   XP_038950443
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,733 - 50,711,346 (+)NCBI
mRatBN7.21641,251,911 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094516   ⟹   XP_038950444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,733 - 50,711,346 (+)NCBI
mRatBN7.21641,251,911 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_039094517   ⟹   XP_038950445
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,379,280 - 50,711,346 (+)NCBI
mRatBN7.21643,644,181 - 43,978,588 (+)NCBI
RefSeq Acc Id: XM_063275416   ⟹   XP_063131486
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,732 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275417   ⟹   XP_063131487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,092,614 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275418   ⟹   XP_063131488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,734 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275419   ⟹   XP_063131489
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81647,984,734 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275420   ⟹   XP_063131490
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,379,954 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275421   ⟹   XP_063131491
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,379,954 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275422   ⟹   XP_063131492
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,379,954 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275423   ⟹   XP_063131493
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,380,333 - 50,711,346 (+)NCBI
RefSeq Acc Id: XM_063275424   ⟹   XP_063131494
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81650,379,436 - 50,711,346 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001162604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950434 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950435 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950436 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950437 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950438 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950439 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950440 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950441 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950442 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950443 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950444 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950445 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131486 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131487 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131488 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131489 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131490 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131491 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131492 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131493 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131494 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000017625
  ENSRNOP00000017625.7
  ENSRNOP00000076753
  ENSRNOP00000076753.1
  ENSRNOP00000091422
  ENSRNOP00000091422.1
  ENSRNOP00000109669
  ENSRNOP00000109669.1
  ENSRNOP00000111017.1
  ENSRNOP00000111639
  ENSRNOP00000111639.1
  ENSRNOP00000112352
  ENSRNOP00000112352.1
RefSeq Acc Id: NP_001162604   ⟸   NM_001169133
- UniProtKB: A0A8I6ABL2 (UniProtKB/TrEMBL),   A6JPJ6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000017625   ⟸   ENSRNOT00000017624
RefSeq Acc Id: XP_038950439   ⟸   XM_039094511
- Peptide Label: isoform X3
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950434   ⟸   XM_039094506
- Peptide Label: isoform X1
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950441   ⟸   XM_039094513
- Peptide Label: isoform X5
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950438   ⟸   XM_039094510
- Peptide Label: isoform X2
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950440   ⟸   XM_039094512
- Peptide Label: isoform X4
- UniProtKB: A0A8I6ABL2 (UniProtKB/TrEMBL),   A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950435   ⟸   XM_039094507
- Peptide Label: isoform X1
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950442   ⟸   XM_039094514
- Peptide Label: isoform X6
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950443   ⟸   XM_039094515
- Peptide Label: isoform X7
- UniProtKB: A0A8I5Y4Y3 (UniProtKB/TrEMBL),   A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950444   ⟸   XM_039094516
- Peptide Label: isoform X8
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950436   ⟸   XM_039094508
- Peptide Label: isoform X1
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950437   ⟸   XM_039094509
- Peptide Label: isoform X1
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950445   ⟸   XM_039094517
- Peptide Label: isoform X11
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000076753   ⟸   ENSRNOT00000094358
Ensembl Acc Id: ENSRNOP00000091422   ⟸   ENSRNOT00000105413
RefSeq Acc Id: XP_063131486   ⟸   XM_063275416
- Peptide Label: isoform X1
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131488   ⟸   XM_063275418
- Peptide Label: isoform X9
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131489   ⟸   XM_063275419
- Peptide Label: isoform X10
- UniProtKB: F1LV44 (UniProtKB/TrEMBL),   A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131487   ⟸   XM_063275417
- Peptide Label: isoform X1
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131494   ⟸   XM_063275424
- Peptide Label: isoform X11
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131490   ⟸   XM_063275420
- Peptide Label: isoform X11
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131491   ⟸   XM_063275421
- Peptide Label: isoform X12
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131492   ⟸   XM_063275422
- Peptide Label: isoform X13
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131493   ⟸   XM_063275423
- Peptide Label: isoform X11
- UniProtKB: A6JPJ6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000109669   ⟸   ENSRNOT00000137496
Ensembl Acc Id: ENSRNOP00000112352   ⟸   ENSRNOT00000168106
Ensembl Acc Id: ENSRNOP00000111017   ⟸   ENSRNOT00000160963
Ensembl Acc Id: ENSRNOP00000111639   ⟸   ENSRNOT00000140066
Protein Domains
EGF-like   Teneurin N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LV44-F1-model_v2 AlphaFold F1LV44 1-2545 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306641 AgrOrtholog
BioCyc Gene G2FUF-11438 BioCyc
Ensembl Genes ENSRNOG00000012802 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000017624 ENTREZGENE
  ENSRNOT00000017624.8 UniProtKB/TrEMBL
  ENSRNOT00000094358 ENTREZGENE
  ENSRNOT00000094358.2 UniProtKB/TrEMBL
  ENSRNOT00000105413 ENTREZGENE
  ENSRNOT00000105413.2 UniProtKB/TrEMBL
  ENSRNOT00000137496 ENTREZGENE
  ENSRNOT00000137496.1 UniProtKB/TrEMBL
  ENSRNOT00000140066 ENTREZGENE
  ENSRNOT00000140066.1 UniProtKB/TrEMBL
  ENSRNOT00000160963.1 UniProtKB/TrEMBL
  ENSRNOT00000168106 ENTREZGENE
  ENSRNOT00000168106.1 UniProtKB/TrEMBL
Gene3D-CATH 2.120.10.30 UniProtKB/TrEMBL
  Galactose-binding domain-like UniProtKB/TrEMBL
  Laminin UniProtKB/TrEMBL
  RHS repeat-associated core UniProtKB/TrEMBL
InterPro 6-blade_b-propeller_TolB-like UniProtKB/TrEMBL
  CarboxyPept-like_regulatory UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
  FN-plug_TEN1-4 UniProtKB/TrEMBL
  IPR006530 UniProtKB/TrEMBL
  Quinoprot_gluc/sorb_DH UniProtKB/TrEMBL
  Rhs_assc_core UniProtKB/TrEMBL
  Ten_N UniProtKB/TrEMBL
  TEN_NHL UniProtKB/TrEMBL
  TEN_TTR-like UniProtKB/TrEMBL
  TEN_YD-shell UniProtKB/TrEMBL
  Teneurin1-4_GBD UniProtKB/TrEMBL
  Teneurin_domain UniProtKB/TrEMBL
  Tox-GHH_dom UniProtKB/TrEMBL
KEGG Report rno:306451 UniProtKB/TrEMBL
NCBI Gene 306451 ENTREZGENE
PANTHER PTHR11219:SF65 UniProtKB/TrEMBL
  TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE UniProtKB/TrEMBL
Pfam EGF_TEN UniProtKB/TrEMBL
  FN-plug_TEN1-4 UniProtKB/TrEMBL
  GBD_Tenm3 UniProtKB/TrEMBL
  Ten_N UniProtKB/TrEMBL
  TEN_NHL UniProtKB/TrEMBL
  TEN_YD-shell UniProtKB/TrEMBL
  Teneurin_ABD UniProtKB/TrEMBL
  Tox-GHH UniProtKB/TrEMBL
  TTR_TEN1-4 UniProtKB/TrEMBL
PhenoGen Tenm3 PhenoGen
PROSITE EGF_1 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
  TENEURIN_N UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012802 RatGTEx
SMART EGF UniProtKB/TrEMBL
Superfamily-SCOP CarboxypepD_reg UniProtKB/TrEMBL
  NHL repeat UniProtKB/TrEMBL
  SSF50952 UniProtKB/TrEMBL
UniProt A0A8I5Y4Y3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ABL2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0M291_RAT UniProtKB/TrEMBL
  A0ABK0M467_RAT UniProtKB/TrEMBL
  A0ABK0M5U2_RAT UniProtKB/TrEMBL
  A0ABK0M886_RAT UniProtKB/TrEMBL
  A6JPJ6 ENTREZGENE, UniProtKB/TrEMBL
  F1LV44 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Tenm3  teneurin transmembrane protein 3  LOC103693952  uncharacterized LOC103693952  Data merged from RGD:9102755 737654 PROVISIONAL
2014-08-25 LOC103693952  uncharacterized LOC103693952      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-05-24 Tenm3  teneurin transmembrane protein 3  LOC100361541  odz, odd Oz/ten-m homolog 3-like  Data merged from RGD:2319926 1643240 APPROVED
2012-10-11 Tenm3  teneurin transmembrane protein 3  Odz3  odz, odd Oz/ten-m homolog 3 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 LOC100361541  odz, odd Oz/ten-m homolog 3-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-09-09 Odz3  odz, odd Oz/ten-m homolog 3 (Drosophila)  Odz3  odd Oz/ten-m homolog 3 (Drosophila)   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Odz3  odd Oz/ten-m homolog 3 (Drosophila)   Odz3_predicted  odd Oz/ten-m homolog 3 (Drosophila) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Odz3_predicted  odd Oz/ten-m homolog 3 (Drosophila) (predicted)      Symbol and Name status set to approved 70820 APPROVED