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Gene: Slc38a10 (solute carrier family 38, member 10) Rattus norvegicus

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Symbol:

Slc38a10

Name:

solute carrier family 38, member 10

RGD ID:

1306356

Description:

Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to act upstream of or within bone development. Predicted to be located in Golgi apparatus. Predicted to be active in membrane. Orthologous to human SLC38A10 (solute carrier family 38 member 10); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; C60 fullerene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

amino acid transporter SLC38A10; LOC303740; putative sodium-coupled neutral amino acid transporter 10; RGD1306356; similar to hypothetical protein MGC15523; solute carrier family 38 member 10

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	105,885,250 - 105,935,043 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	105,885,250 - 105,935,043 (-)	Ensembl				GRCr8
mRatBN7.2	10	105,386,836 - 105,436,636 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	105,386,836 - 105,436,636 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	110,491,242 - 110,540,834 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	109,954,273 - 110,003,863 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	105,307,378 - 105,357,144 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	10	109,035,488 - 109,085,867 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	10	109,763,593 - 109,813,968 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	10	111,205,431 - 111,255,804 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	10	111,325,200 - 111,374,596 (-)	NCBI		F344_StmMcwi
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	109,284,957 - 109,333,899 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	109,516,004 - 109,569,804 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	103,932,190 - 103,983,957 (-)	NCBI		Celera
RGSC_v3.1	10	109,531,609 - 109,584,333 (-)	NCBI
Cytogenetic Map	10	q32.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

C60 fullerene (EXP)

cadmium dichloride (ISO)

caffeine (ISO)

calcium silicate (ISO)

cannabidiol (ISO)

chlorpyrifos (ISO)

clofibrate (ISO)

clofibric acid (EXP)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

DDE (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dorsomorphin (ISO)

Erionite (ISO)

ethanol (ISO)

fluorescein 5-isothiocyanate (ISO)

folic acid (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glafenine (EXP)

iron dichloride (ISO)

lead(0) (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

menadione (ISO)

methotrexate (ISO)

nickel atom (ISO)

nitrates (ISO)

ozone (ISO)

paracetamol (ISO)

PCB138 (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenylmercury acetate (ISO)

rac-lactic acid (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

tetrachloromethane (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

tungsten (ISO)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid transmembrane transport (IBA)

amino acid transport (IEA)

bone development (ISO)

L-alpha-amino acid transmembrane transport (IEA)

monoatomic cation transmembrane transport (IEA)

neutral amino acid transport (IEA)

transmembrane transport (IEA)

Cellular Component

Golgi apparatus (IEA,ISO)

membrane (IBA,IEA)

Molecular Function

L-amino acid transmembrane transporter activity (IBA)

monoatomic cation transmembrane transporter activity (IEA)

neutral L-amino acid transmembrane transporter activity (IEA)

secondary active transmembrane transporter activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:22876197	PMID:31842320

Genomics

Comparative Map Data

Slc38a10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	105,885,250 - 105,935,043 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	105,885,250 - 105,935,043 (-)	Ensembl				GRCr8
mRatBN7.2	10	105,386,836 - 105,436,636 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	105,386,836 - 105,436,636 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	110,491,242 - 110,540,834 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	109,954,273 - 110,003,863 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	105,307,378 - 105,357,144 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	10	109,035,488 - 109,085,867 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	10	109,763,593 - 109,813,968 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	10	111,205,431 - 111,255,804 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	10	111,325,200 - 111,374,596 (-)	NCBI		F344_StmMcwi
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	109,284,957 - 109,333,899 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	109,516,004 - 109,569,804 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	103,932,190 - 103,983,957 (-)	NCBI		Celera
RGSC_v3.1	10	109,531,609 - 109,584,333 (-)	NCBI
Cytogenetic Map	10	q32.3	NCBI

SLC38A10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	81,244,811 - 81,295,307 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	81,244,811 - 81,295,567 (-)	Ensembl			hg38	GRCh38
GRCh37	17	79,218,611 - 79,269,107 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	76,833,394 - 76,883,691 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	17	75,849,343 - 75,903,449 (-)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	74,654,895 - 74,707,860 (-)	NCBI		HuRef
CHM1_1	17	79,305,019 - 79,355,407 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	82,153,934 - 82,207,205 (-)	NCBI		T2T-CHM13v2.0

Slc38a10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	119,994,777 - 120,042,177 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	119,994,786 - 120,042,172 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	120,103,951 - 120,151,351 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	120,103,960 - 120,151,346 (-)	Ensembl			mm10	GRCm38
MGSCv37	11	119,965,265 - 120,012,665 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	119,920,061 - 119,967,364 (-)	NCBI		MGSCv36	mm8
Celera	11	131,839,597 - 131,887,014 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	83.96	NCBI

Slc38a10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	1,724,389 - 1,767,010 (+)	Ensembl
ChiLan1.0	NW_004955506	1,724,426 - 1,767,582 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC38A10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	97,825,156 - 97,876,619 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	102,724,718 - 102,776,356 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	75,671,287 - 75,722,296 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	81,399,832 - 81,451,077 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	81,399,832 - 81,451,077 (-)	Ensembl			panPan2	panpan1.1

SLC38A10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	810,328 - 850,031 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	810,206 - 909,492 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	1,425,291 - 1,464,946 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	1,417,051 - 1,456,747 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	1,417,004 - 1,456,743 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	1,441,028 - 1,480,665 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	1,566,823 - 1,606,451 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	1,647,003 - 1,686,656 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Slc38a10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	1,420,031 - 1,457,323 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936594	4,952,231 - 5,022,184 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC38A10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	1,481,295 - 1,514,497 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	12	1,481,245 - 1,514,499 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	1,374,287 - 1,424,136 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC38A10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	73,196,407 - 73,243,008 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	73,195,670 - 73,242,995 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666077	44,569,259 - 44,621,227 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc38a10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	10,265,900 - 10,308,147 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624801	10,266,018 - 10,307,909 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Slc38a10
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	63,860,880 - 63,910,632 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Slc38a10
132 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	278
Count of miRNA genes:	178
Interacting mature miRNAs:	198
Transcripts:	ENSRNOT00000006225, ENSRNOT00000040630, ENSRNOT00000068516
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7387312	Bw125	Body weight QTL 125	3	0.0047	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight (CMO:0000356)	10	65390777	107713808	Rat
1354641	Bvd2	Brain ventricular dilatation QTL 2	6.36	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	10	93723381	107556066	Rat
8657410	Bp374	Blood pressure QTL 374			heart left ventricle size trait (VT:0002753)	heart left ventricle end-diastolic diameter (CMO:0000982)	10	67476608	107713808	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63719161	107713808	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
12903252	Cm113	Cardiac mass QTL 113		0.047	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68920187	107713808	Rat
2298548	Neuinf7	Neuroinflammation QTL 7	3.4		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	10	64939013	107713808	Rat
1358915	Stresp7	Stress response QTL 7	3.52		blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	65307813	107713808	Rat
1302404	Cia27	Collagen induced arthritis QTL 27	2.6	0.0045	joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	10	76951790	107713808	Rat
70168	Eae12	Experimental allergic encephalomyelitis QTL 12		0.0009	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	73599825	107713808	Rat
634320	Niddm49	Non-insulin dependent diabetes mellitus QTL 49	4.41		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	10	89039175	107713808	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	54296227	107713808	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61843496	106843496	Rat
6893366	Bw106	Body weight QTL 106	0.3	0.47	body mass (VT:0001259)	body weight (CMO:0000012)	10	70698731	107713808	Rat
12903269	Am15	Aortic mass QTL 15		0.042	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
1576313	Pia25	Pristane induced arthritis QTL 25			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	96620293	107713808	Rat
12903266	Cm114	Cardiac mass QTL 114		0.02	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	66817119	107713808	Rat
1578672	Bmd16	Bone mineral density QTL 16	6.2		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	97202388	107556066	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
1576307	Cia28	Collagen induced arthritis QTL 28			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	96620293	107713808	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62556066	107556066	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1581559	Eae18	Experimental allergic encephalomyelitis QTL 18		0.00002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	10	66108888	107555881	Rat
12880372	Am12	Aortic mass QTL 12		0.003	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
70193	Mcs7	Mammary carcinoma susceptibility QTL 7	2.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62556066	107556066	Rat
12880375	Kidm66	Kidney mass QTL 66		0.009	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
61363	Oia3	Oil induced arthritis QTL 3		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	87807758	107713808	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
12880370	Cm105	Cardiac mass QTL 105		0.008	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
12880371	Cm106	Cardiac mass QTL 106		0.007	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
1600367	Mcs15	Mammary carcinoma susceptibility QTL 15	4.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
631537	Oia4	Oil induced arthritis QTL 4			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	76128947	107713808	Rat
1300137	Bp186	Blood pressure QTL 186	3.57		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	10	91127270	107556066	Rat
634354	Rends3	Renal damage susceptibility QTL 3		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	10	61997479	106997479	Rat
61436	Cia5	Collagen induced arthritis QTL 5	4.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	91727883	107713808	Rat
11565453	Kidm58	Kidney mass QTL 58		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
2301405	Cm69	Cardiac mass QTL 69		0.031	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
1578663	Bss18	Bone structure and strength QTL 18	3.6		femur width (VT:1000666)	femoral neck width (CMO:0001695)	10	97202388	107556066	Rat

Markers in Region

RH138589

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	105,894,073 - 105,894,224 (+)	Marker Load Pipeline
mRatBN7.2	10	105,395,659 - 105,395,811 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	109,292,877 - 109,293,028	NCBI	Rnor6.0
Rnor_5.0	10	108,891,165 - 108,891,316	UniSTS	Rnor5.0
RGSC_v3.4	10	109,524,827 - 109,524,978	UniSTS	RGSC3.4
Celera	10	103,941,014 - 103,941,165	UniSTS
Cytogenetic Map	10	q32.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001376915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001081798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001081800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002727846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006220970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006220971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006220972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006220973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_221195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC098794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006225 ⟹ ENSRNOP00000006225

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	105,885,250 - 105,935,043 (-)	Ensembl
mRatBN7.2 Ensembl	10	105,386,836 - 105,436,636 (-)	Ensembl
Rnor_6.0 Ensembl	10	109,284,957 - 109,333,899 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094909 ⟹ ENSRNOP00000086955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	105,885,250 - 105,935,043 (-)	Ensembl
mRatBN7.2 Ensembl	10	105,386,836 - 105,436,636 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095802 ⟹ ENSRNOP00000081337

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	105,885,250 - 105,935,043 (-)	Ensembl
mRatBN7.2 Ensembl	10	105,387,377 - 105,436,609 (-)	Ensembl

RefSeq Acc Id:

NM_001376915 ⟹ NP_001363844

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,250 - 105,935,043 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,436,636 (-)	NCBI
Dahl_SR_JrHsd	10	109,035,488 - 109,085,867 (-)	NCBI
Lyon_Normotensive	10	109,763,593 - 109,813,968 (-)	NCBI
Lyon_Hypertensive	10	111,205,431 - 111,255,804 (-)	NCBI
F344_StmMcwi	10	111,325,200 - 111,374,596 (-)	NCBI

RefSeq Acc Id:

XM_002727846 ⟹ XP_002727892

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,436,579 (-)	NCBI
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI
RGSC_v3.4	10	109,516,004 - 109,569,804 (-)	RGD

Sequence:

show sequence

CTTCCTGGCAGAGTACACTCCGAAGGCGGAAGTTTGTGTGCCGGAGGCAGCGAAGCGGAGCTGA
GGTGTTGCTAGCGTTGCCTGCGGCGCTTCCGGGTCCCTGCTCCACTCTCGGGAGGCGGAGGCGG
GAACCTGAAACCATGGCTGTGAGGCTGCTGCGGAGTCTGACAGGGTCCGGAGGCTGATTTTGCG
ACGCCTGTCTGCGGGTCCCCTGATCCCGGTTTAGGGTTATCTAGGGTCGCGCCGTCCCGGCCCC
TAGACCCTCAAAATGACCGCCGCCTCCACCTCCAAGTGGGGGCTGGTCACGAACGTCGTAAACA
GCATAGTGGGGGTCAGCGTACTCACCATGCCTTTCTGCTTCAAACAGTGTGGCATTGTCCTGGG
GGCCCTGCTCCTGGTCTTCTGCTCCTGGATGACGCACCAGTCTTGCATGTTCTTGGTGAAGTCG
GCCAGCTTGAGCAAGAGGAGAACCTATGCCGGCCTGGCATTCCACGCCTACGGCAAGGCTGGGA
AGATGCTGGTGGAGACCAGCATGATTGGGCTGATGCTGGGATCCTGCATTACCTTCTATGTCGT
GATTGGTGACTTGGGGTCCAACTTCTTTGCTCCGCTGCTTGGATTACAGGTAACCAGGACCTTC
CGTGTATTCCTGCTCTTTGCAGTATCCCTGTGCATCGTCCTCCCACTCAGCCTGCAGAGAAACA
TGATGGCCTCCATCCAGTCCTTCAGTGCCATGGCACTCCTCTTCTACACTGTCTTCATGTTTGT
GATTGTGCTGTCCTCTTTTAAGCATGGCCTCTTTAGTGGGCAGTGGCTGCAGCGGGTCAGCTAC
ATTCGCTGGGAAGGCGTTTTCCGCTGTGTCCCCATCTTTGGCATGTCCTTTGCCTGTCAGTCCC
AGGTCCTGCCCACCTACGACAGCCTGGATGAGCCATCAGTGAAGACCATGAGTTCCATATTTGC
CTCCTCCCTCAACGTGGTCACCGCCTTCTATGTCATGGTGGGGTTTTTTGGTTACGTCAGCTTC
ACTGATGCCACCACAGGCAACGTGCTGATACACTTCCCCTCCAACCTGGTGACAGAGATGATCC
GAGTGGGCTTTGTGATGTCTGTGGCTGTCGGCTTCCCCATGATGATTCTGCCCTGCAGACAGGC
CTTGAACACACTGCTATTTGAGCAGCAGCAAAAAGACGGAACCTTTGCTGCAGGAGGGTACATG
CCCCCACTCCGGTTTAAAGTCCTCACCCTCTCGGTGGTGTTCGGAACCATGGTCGGTGGCGTCA
TGATCCCCAATGTGGAAACCATCCTTGGCTTCACAGGAGCAACGATGGGGAGCCTCATCTGCTT
CATCTGCCCGGCTCTGATCTATAAGAAAGCCCACAAGAATGCCCCCTCAGCCCAGGTGGTGCTC
TGGGTCGGCCTGGGCATCCTAGTGGTCAGCACACTCACCACCCTGTCTGTGAGCGAAGAAGCTC
CTCTGGACTTGACGCAAGGAGCTCGCAGCGGCCAGCGAGGAGATGCCGAGGGCGCGATGAAGGT
GGAGGCAGCCCGGCTATCAGTCCAGGATCCCGTTGTAGTCATGGCTGAGGATAGCCAAGAGAAG
CTAAAGCCAGCAGAGGACAAAGAGGTCCTGGAGCAGGCCCAGATTAAGGGGCCAGTGGATGTGC
CTGGAGGGGACACTCCCAAGGAGAAGCAGGAAGCTGCACAGCTGGATCGCCCAGGTCAAGGTAT
TGCTGTCCCTATGGGCGAGGCCCATCGCCACGAGCCTCCCATCCCTCATGATAAAGTGGTGGTG
GATGAAGGCCAGGACCAAGAAGGGCCAGAGGAGAAAAAGCCACCTCCCAAGCTCCCAGATGAAG
GAGACCCTGCAGGCAGGGGGCAGGGGGCACCACTTCTGCCTGAGTCAGAGAAGAAGCAGGACCC
TGAGAGGGGAGAGGAAGGAAAGAGACCTGAGCAAGTCCTGGCAGTAGGGGAAATTGAACGTCCT
CAGAAGATTCCAGAAGCAAATGGTCAGCCACCTGTCCAGCCTAGGAAGGAAGATTCCAGACCAG
GAAATAGGGATCTGCATCCAGTTCCCCAGGCCAGGGTCTCTGTGGAGCTGAATGATCTGGTGGC
AGGTGAAGGCAAGGAGTCTGCACAGAAGGCTGGAGGGGCCCCGTGGAAGCCCATGGAGAGTGCC
GTGGAGAGCAATATTGGTGGGAAGGCGGGCCTCGCTGTACAAAGGCCGGAGGCTGCAGAGCAGA
GGGAGAAGAACGAGGCTGAGCAACCGGGTGGAGACCAAGCAGGGAGCAAGTTGGAAGCTGAGAT
TAAAAAGCTAGTAGCAGAAGCTGGGAGGGCAGAGATGCTGGACCATGCTGTACTGCTACAGGTG
ATCAAAGAGCAGCAGGTTCAGCAGAAGCGCCTCTTGGACCAGCAGGAGAAGCTGCTTGCAGTGA
TTGAGGAGCAGCACAAGGAGATCCGGCAGCAGCGACAGGAGGGTGAGGAGGACAAGCCTAAGCC
TGCAGACATGCAGCCAGAGCCTGGGGCGGCTGTACTCAGAGGACAGGAAGAGGAGGCTGAGCAT
GCTGGGGCCCCAGATGAGCATGCTGGGGAGACACTGGAAGATAACCCTTCACAGCCTTTGCAAC
CTGTGCTTGGAGCTCCTAGGGGTCACCCTGCTCCATCCCAAGACAAGGGCCAGCACCCTCTGGA
GGAAGTCAAGGTACTGGCAGGCAGAGACCTTGCTGACCTTCCTGCTGGTGGTTCTGACACAGAG
CCCCATGGGGCTTCAAGTAAGCTGAGAGAAGACCAAAAAGGTGCTGCCCTCAAGGTGGCTGAAG
CTGTGAGGAAGCTGGTCCCAGGGGACTTGGAACCAGTGCACAAGCCAGACCCTGCTGAGGTGCC
CAAGAGTCCAGAGAAGCAGCTTGCCAAGGAGGTTGCCAGGCAGCGCCAAGATGTCTTTGGTGAA
GGTTCCCAAGAAAGGAAGGAAACTGGAAAGGATGCAGTGGCCCCTGGTGCTGATACTCAGAAAG
AGGCTGCCCAGCCTTTAGTGGGGGCAGAAGCTGAGGACTCTCACTCAAAATCCAGGCACTCAGA
ACCCACCAAGGTCCCAGCTAGTGGGCCAGCAGGTATGGGCTTTCAGGCCCAAGCCAGGTTTCGG
CAAGAACCCCAGGTCATCTTTGACAAAAGTCAGGATTCTCACCCAGAGGTAAGAAGTGAGGGCC
CCCGAGGGGTTGGCATCCCTGCTGAGGAGCAGCACAGAGGAAGAGGGGCTGCCGCTATGCAAGA
GGAAAAGCAGAGACCAGATCCGAATTCTGGGCCCAAACTAGCTGTGCCTGGGGATCAGAAGCCT
GAGAATGCCAAACCTAACAGAGACCTGAAAGTGCAGGCTGGCTCTGACCTGCGGAGGAGACGGC
GGGATCTCGCCTCTCCTCCAGAGCAGGAGCTGGCTCCAAAGGATGGAGTCATCATTAGCTTTAA
CTCCCTCCCTAACGTACAGGTGAACGACCTCCGCAGTGCTCTGGACACCCAGCTCCGCCAGGCT
GCAGGGGCCGCATTACAGGTGGTGCACAGCCGGCAGATTAAACAGTTGTCTGGAGACCTGGAGG
AAGCCTGAGAACCTGGTCAGGGGAAGGCTGCTGCTAGACATTGGACGGCAGGCAGCCGGTGTCC
TCTGGCGACACCCTGACTGGAGGCCATGTTGTTATGTTCCCAAGTCCTTCATGATGAATTGCGA
AAGTCTACCCTGCCACCCAACCCTAGGCATCTGTCCCTCTGTGGCTTCACTTGCCCCAAGGCCA
CACCAAAGCACGCACTGGCCCTAGTATGGTGGGTCTTGAACCAGCCCAGGAGAAGCAGTGCTAC
ATACAGTTCAGCTCCAGTGATGCACTGCGGCACCTCGGCTGTTCAGACTCAGTCTGGCAGTGCT
GACAGCAAGGCAGGCAACTTTGAAGTTGCCAGTCTTCATCTAACTTGCAACCTGTGACAGCCAG
ATTCCACTGACTAGATAAATTCCATGTTCTCCATAGAAGGAAACCTGCATCAGGGATGTCTGTC
TGCCTTGGGGTGGGTAGGACTTGACTTGGGTTGGGAAAGGAGGCACACAGCCCTCCTGGTTTTT
ATCATCCACATTCTTTGAACCTGATTATGAAGCAAAAAATAAAACACCACTAACAAGTAGTGAG
TCAAGTTGGTTTACCTAAAGGAAAACACATTCAGGATCCTGGATGATACCAAACCAGCTAGAGG
CTAGAGGTCATGGGGATACACGCCCCAGCCGTCTTCCTGAACCAGCTGAGTGCTGCTGGGGAAG
CAACAGGCAACAGGCCCCCGTGCTGATCCCTGTTGTAGGGAGGGGTTGGACAATGAGCACAGGC
TTGCCACCAGCAAGCCCTGGGATGTATCTACACGGCTTTAGGCTCAGAGTAGAGCTGCCCTCTG
TCCAACTGCAGCTGTCAGGGTAGTGTCCTGGGAGTCAGAGCAGGAAGTCATGACTGTTGTCTTT
GAGCAGAGAATACTTGATATGTTTTGTCACTCACTCCCTTGCCCAGTAAGGAGACTGAGGGACA
ACAGCCTGGTTTGTCCCCAAGCCCTGCCGTGAAGGGCCTGGAAGCACCAGGAGCCTCAGTGGAA
TCATACTTGGACCAGGCCACACCCTATTGTGTACCTGCTGCACCTCTTGAAATGTATTTTATTA
CAGTTTATTTTTTTTTAATTTA

hide sequence

RefSeq Acc Id:

XM_006247943 ⟹ XP_006248005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,436,579 (-)	NCBI
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI

Sequence:

show sequence

CTTCCTGGCAGAGTACACTCCGAAGGCGGAAGTTTGTGTGCCGGAGGCAGCGAAGCGGAGCTGA
GGTGTTGCTAGCGTTGCCTGCGGCGCTTCCGGGTCCCTGCTCCACTCTCGGGAGGCGGAGGCGG
GAACCTGAAACCATGGCTGTGAGGCTGCTGCGGAGTCTGACAGGGTCCGGAGGCTGATTTTGCG
ACGCCTGTCTGCGGGTCCCCTGATCCCGGTTTAGGGTTATCTAGGGTCGCGCCGTCCCGGCCCC
TAGACCCTCAAAATGACCGCCGCCTCCACCTCCAAGTGGGGGCTGGTCACGAACGTCGTAAACA
GCATAGTGGGGGTCAGCGTACTCACCATGCCTTTCTGCTTCAAACAGTGTGGCATTGTCCTGGG
GGCCCTGCTCCTGGTCTTCTGCTCCTGGATGACGCACCAGTCTTGCATGTTCTTGGTGAAGTCG
GCCAGCTTGAGCAAGAGGAGAACCTATGCCGGCCTGGCATTCCACGCCTACGGCAAGGCTGGGA
AGATGCTGGTGGAGACCAGCATGATTGGGCTGATGCTGGGATCCTGCATTACCTTCTATGTCGT
GATTGGTGACTTGGGGTCCAACTTCTTTGCTCCGCTGCTTGGATTACAGGTAACCAGGACCTTC
CGTGTATTCCTGCTCTTTGCAGTATCCCTGTGCATCGTCCTCCCACTCAGCCTGCAGAGAAACA
TGATGGCCTCCATCCAGTCCTTCAGTGCCATGGCACTCCTCTTCTACACTGTCTTCATGTTTGT
GATTGTGCTGTCCTCTTTTAAGCATGGCCTCTTTAGTGGGCAGTGGCTGCAGCGGGTCAGCTAC
ATTCGCTGGGAAGGCGTTTTCCGCTGTGTCCCCATCTTTGGCATGTCCTTTGCCTGTCAGTCCC
AGGTCCTGCCCACCTACGACAGCCTGGATGAGCCATCAGTGAAGACCATGAGTTCCATATTTGC
CTCCTCCCTCAACGTGGTCACCGCCTTCTATGTCATGGTGGGGTTTTTTGGTTACGTCAGCTTC
ACTGATGCCACCACAGGCAACGTGCTGATACACTTCCCCTCCAACCTGGTGACAGAGATGATCC
GAGTGGGCTTTGTGATGTCTGTGGCTGTCGGCTTCCCCATGATGATTCTGCCCTGCAGACAGGC
CTTGAACACACTGCTATTTGAGCAGCAGCAAAAAGACGGAACCTTTGCTGCAGGAGGGTACATG
CCCCCACTCCGGTTTAAAGTCCTCACCCTCTCGGTGGTGTTCGGAACCATGGTCGGTGGCGTCA
TGATCCCCAATGTGGAAACCATCCTTGGCTTCACAGGAGCAACGATGGGGAGCCTCATCTGCTT
CATCTGCCCGGCTCTGATCTATAAGAAAGCCCACAAGAATGCCCCCTCAGCCCAGGTGGTGCTC
TGGGTCGGCCTGGGCATCCTAGTGGTCAGCACACTCACCACCCTGTCTGTGAGCGAAGAAGCTC
CTCTGGACTTGACGCAAGGAGCTCGCAGCGGCCAGCGAGGAGATGCCGAGGGCGCGATGAAGGT
GGAGGCAGCCCGGCTATCAGTCCAGGATCCCGTTGTAGTCATGGCTGAGGATAGCCAAGAGAAG
CTAAAGCCAGCAGAGGACAAAGAGGTCCTGGAGCAGGCCCAGATTAAGGGGCCAGTGGATGTGC
CTGGAGGGGACACTCCCAAGGAGAAGCAGGAAGCTGCACAGCTGGATCGCCCAGGTCAAGGTAT
TGCTGTCCCTATGGGCGAGGCCCATCGCCACGAGCCTCCCATCCCTCATGATAAAGTGGTGGTG
GATGAAGGCCAGGACCAAGAAGGGCCAGAGGAGAAAAAGCCACCTCCCAAGCTCCCAGATGAAG
GAGACCCTGCAGGCAGGGGGCAGGGGGCACCACTTCTGCCTGAGTCAGAGAAGAAGCAGGACCC
TGAGAGGGGAGAGGAAGGAAAGAGACCTGAGCAAGTCCTGGCAGTAGGGGAAATTGAACGTCCT
CAGAAGATTCCAGAAGCAAATGGTCAGCCACCTGTCCAGCCTAGGAAGGAAGATTCCAGACCAG
GAAATAGGGATCTGCATCCAGTTCCCCAGGCCAGGGTCTCTGTGGAGCTGAATGATCTGGTGGC
AGGTGAAGGCAAGGAGTCTGCACAGAAGGCTGGAGGGGCCCCGTGGAAGCCCATGGAGAGTGCC
GTGGAGAGCAATATTGGTGGGAAGGCGGGCCTCGCTGTACAAAGGCCGGAGGCTGCAGAGCAGA
GGGAGAAGAACGAGGCTGAGCAACCGGGTGGAGACCAAGCAGGGAGCAAGTTGGAAGCTGAGAT
TAAAAAGCTAGTAGCAGCTGGGAGGGCAGAGATGCTGGACCATGCTGTACTGCTACAGGTGATC
AAAGAGCAGCAGGTTCAGCAGAAGCGCCTCTTGGACCAGCAGGAGAAGCTGCTTGCAGTGATTG
AGGAGCAGCACAAGGAGATCCGGCAGCAGCGACAGGAGGGTGAGGAGGACAAGCCTAAGCCTGC
AGACATGCAGCCAGAGCCTGGGGCGGCTGTACTCAGAGGACAGGAAGAGGAGGCTGAGCATGCT
GGGGCCCCAGATGAGCATGCTGGGGAGACACTGGAAGATAACCCTTCACAGCCTTTGCAACCTG
TGCTTGGAGCTCCTAGGGGTCACCCTGCTCCATCCCAAGACAAGGGCCAGCACCCTCTGGAGGA
AGTCAAGGTACTGGCAGGCAGAGACCTTGCTGACCTTCCTGCTGGTGGTTCTGACACAGAGCCC
CATGGGGCTTCAAGTAAGCTGAGAGAAGACCAAAAAGGTGCTGCCCTCAAGGTGGCTGAAGCTG
TGAGGAAGCTGGTCCCAGGGGACTTGGAACCAGTGCACAAGCCAGACCCTGCTGAGGTGCCCAA
GAGTCCAGAGAAGCAGCTTGCCAAGGAGGTTGCCAGGCAGCGCCAAGATGTCTTTGGTGAAGGT
TCCCAAGAAAGGAAGGAAACTGGAAAGGATGCAGTGGCCCCTGGTGCTGATACTCAGAAAGAGG
CTGCCCAGCCTTTAGTGGGGGCAGAAGCTGAGGACTCTCACTCAAAATCCAGGCACTCAGAACC
CACCAAGGTCCCAGCTAGTGGGCCAGCAGGTATGGGCTTTCAGGCCCAAGCCAGGTTTCGGCAA
GAACCCCAGGTCATCTTTGACAAAAGTCAGGATTCTCACCCAGAGGTAAGAAGTGAGGGCCCCC
GAGGGGTTGGCATCCCTGCTGAGGAGCAGCACAGAGGAAGAGGGGCTGCCGCTATGCAAGAGGA
AAAGCAGAGACCAGATCCGAATTCTGGGCCCAAACTAGCTGTGCCTGGGGATCAGAAGCCTGAG
AATGCCAAACCTAACAGAGACCTGAAAGTGCAGGCTGGCTCTGACCTGCGGAGGAGACGGCGGG
ATCTCGCCTCTCCTCCAGAGCAGGAGCTGGCTCCAAAGGATGGAGTCATCATTAGCTTTAACTC
CCTCCCTAACGTACAGGTGAACGACCTCCGCAGTGCTCTGGACACCCAGCTCCGCCAGGCTGCA
GGGGCCGCATTACAGGTGGTGCACAGCCGGCAGATTAAACAGTTGTCTGGAGACCTGGAGGAAG
CCTGAGAACCTGGTCAGGGGAAGGCTGCTGCTAGACATTGGACGGCAGGCAGCCGGTGTCCTCT
GGCGACACCCTGACTGGAGGCCATGTTGTTATGTTCCCAAGTCCTTCATGATGAATTGCGAAAG
TCTACCCTGCCACCCAACCCTAGGCATCTGTCCCTCTGTGGCTTCACTTGCCCCAAGGCCACAC
CAAAGCACGCACTGGCCCTAGTATGGTGGGTCTTGAACCAGCCCAGGAGAAGCAGTGCTACATA
CAGTTCAGCTCCAGTGATGCACTGCGGCACCTCGGCTGTTCAGACTCAGTCTGGCAGTGCTGAC
AGCAAGGCAGGCAACTTTGAAGTTGCCAGTCTTCATCTAACTTGCAACCTGTGACAGCCAGATT
CCACTGACTAGATAAATTCCATGTTCTCCATAGAAGGAAACCTGCATCAGGGATGTCTGTCTGC
CTTGGGGTGGGTAGGACTTGACTTGGGTTGGGAAAGGAGGCACACAGCCCTCCTGGTTTTTATC
ATCCACATTCTTTGAACCTGATTATGAAGCAAAAAATAAAACACCACTAACAAGTAGTGAGTCA
AGTTGGTTTACCTAAAGGAAAACACATTCAGGATCCTGGATGATACCAAACCAGCTAGAGGCTA
GAGGTCATGGGGATACACGCCCCAGCCGTCTTCCTGAACCAGCTGAGTGCTGCTGGGGAAGCAA
CAGGCAACAGGCCCCCGTGCTGATCCCTGTTGTAGGGAGGGGTTGGACAATGAGCACAGGCTTG
CCACCAGCAAGCCCTGGGATGTATCTACACGGCTTTAGGCTCAGAGTAGAGCTGCCCTCTGTCC
AACTGCAGCTGTCAGGGTAGTGTCCTGGGAGTCAGAGCAGGAAGTCATGACTGTTGTCTTTGAG
CAGAGAATACTTGATATGTTTTGTCACTCACTCCCTTGCCCAGTAAGGAGACTGAGGGACAACA
GCCTGGTTTGTCCCCAAGCCCTGCCGTGAAGGGCCTGGAAGCACCAGGAGCCTCAGTGGAATCA
TACTTGGACCAGGCCACACCCTATTGTGTACCTGCTGCACCTCTTGAAATGTATTTTATTACAG
TTTATTTTTTTTTAATTTA

hide sequence

RefSeq Acc Id:

XM_006247944 ⟹ XP_006248006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,387,938 - 105,436,579 (-)	NCBI
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI

Sequence:

show sequence

CTTCCTGGCAGAGTACACTCCGAAGGCGGAAGTTTGTGTGCCGGAGGCAGCGAAGCGGAGCTGA
GGTGTTGCTAGCGTTGCCTGCGGCGCTTCCGGGTCCCTGCTCCACTCTCGGGAGGCGGAGGCGG
GAACCTGAAACCATGGCTGTGAGGCTGCTGCGGAGTCTGACAGGGTCCGGAGGCTGATTTTGCG
ACGCCTGTCTGCGGGTCCCCTGATCCCGGTTTAGGGTTATCTAGGGTCGCGCCGTCCCGGCCCC
TAGACCCTCAAAATGACCGCCGCCTCCACCTCCAAGTGGGGGCTGGTCACGAACGTCGTAAACA
GCATAGTGGGGGTCAGCGTACTCACCATGCCTTTCTGCTTCAAACAGTGTGGCATTGTCCTGGG
GGCCCTGCTCCTGGTCTTCTGCTCCTGGATGACGCACCAGTCTTGCATGTTCTTGGTGAAGTCG
GCCAGCTTGAGCAAGAGGAGAACCTATGCCGGCCTGGCATTCCACGCCTACGGCAAGGCTGGGA
AGATGCTGGTGGAGACCAGCATGATTGGGCTGATGCTGGGATCCTGCATTACCTTCTATGTCGT
GATTGGTGACTTGGGGTCCAACTTCTTTGCTCCGCTGCTTGGATTACAGGTAACCAGGACCTTC
CGTGTATTCCTGCTCTTTGCAGTATCCCTGTGCATCGTCCTCCCACTCAGCCTGCAGAGAAACA
TGATGGCCTCCATCCAGTCCTTCAGTGCCATGGCACTCCTCTTCTACACTGTCTTCATGTTTGT
GATTGTGCTGTCCTCTTTTAAGCATGGCCTCTTTAGTGGGCAGTGGCTGCAGCGGGTCAGCTAC
ATTCGCTGGGAAGGCGTTTTCCGCTGTGTCCCCATCTTTGGCATGTCCTTTGCCTGTCAGTCCC
AGGTCCTGCCCACCTACGACAGCCTGGATGAGCCATCAGTGAAGACCATGAGTTCCATATTTGC
CTCCTCCCTCAACGTGGTCACCGCCTTCTATGTCATGGTGGGGTTTTTTGGTTACGTCAGCTTC
ACTGATGCCACCACAGGCAACGTGCTGATACACTTCCCCTCCAACCTGGTGACAGAGATGATCC
GAGTGGGCTTTGTGATGTCTGTGGCTGTCGGCTTCCCCATGATGATTCTGCCCTGCAGACAGGC
CTTGAACACACTGCTATTTGAGCAGCAGCAAAAAGACGGAACCTTTGCTGCAGGAGGGTACATG
CCCCCACTCCGGTTTAAAGTCCTCACCCTCTCGGTGGTGTTCGGAACCATGGTCGGTGGCGTCA
TGATCCCCAATGTGGAAACCATCCTTGGCTTCACAGGAGCAACGATGGGGAGCCTCATCTGCTT
CATCTGCCCGGCTCTGATCTATAAGAAAGCCCACAAGAATGCCCCCTCAGCCCAGGTGGTGCTC
TGGGTCGGCCTGGGCATCCTAGTGGTCAGCACACTCACCACCCTGTCTGTGAGCGAAGAAGCTC
CTCTGGACTTGACGCAAGGAGCTCGCAGCGGCCAGCGAGGAGATGCCGAGGGCGCGATGAAGGT
GGAGGCAGCCCGGCTATCAGTCCAGGATCCCGTTGTAGTCATGGCTGAGGATAGCCAAGAGAAG
CTAAAGCCAGCAGAGGACAAAGAGGTCCTGGAGCAGGCCCAGATTAAGGGGCCAGTGGATGTGC
CTGGAGGGGACACTCCCAAGGAGAAGCAGGAAGCTGCACAGCTGGATCGCCCAGGTCAAGGTAT
TGCTGTCCCTATGGGCGAGGCCCATCGCCACGAGCCTCCCATCCCTCATGATAAAGTGGTGGTG
GATGAAGGCCAGGACCAAGAAGGGCCAGAGGAGAAAAAGCCACCTCCCAAGCTCCCAGATGAAG
GAGACCCTGCAGGCAGGGGGCAGGGGGCACCACTTCTGCCTGAGTCAGAGAAGAAGCAGGACCC
TGAGAGGGGAGAGGAAGGAAAGAGACCTGAGCAAGTCCTGGCAGTAGGGGAAATTGAACGTCCT
CAGAAGATTCCAGAAGCAAATGGTCAGCCACCTGTCCAGCCTAGGAAGGAAGATTCCAGACCAG
GAAATAGGGATCTGCATCCAGTTCCCCAGGCCAGGGTCTCTGTGGAGCTGAATGATCTGGTGGC
AGGTGAAGGCAAGGAGTCTGCACAGAAGGCTGGAGGGGCCCCGTGGAAGCCCATGGAGAGTGCC
GTGGAGAGCAATATTGGTGGGAAGGCGGGCCTCGCTGTACAAAGGCCGGAGGCTGCAGAGCAGA
GGGAGAAGAACGAGGCTGAGCAACCGGGTGGAGACCAAGCAGGGAGCAAGTTGGAAGCTGAGAT
TAAAAAGCTAGTAGCAGAAGCTGGGAGGGCAGAGATGCTGGACCATGCTGTACTGCTACAGGTG
ATCAAAGAGCAGCAGGTTCAGCAGAAGCGCCTCTTGGACCAGCAGGAGAAGCTGCTTGCAGTGA
TTGAGGAGCAGCACAAGGAGATCCGGCAGCAGCGACAGGAGGGTGAGGAGGACAAGCCTAAGCC
TGACATGCAGCCAGAGCCTGGGGCGGCTGTACTCAGAGGACAGGAAGAGGAGGCTGAGCATGCT
GGGGCCCCAGATGAGCATGCTGGGGAGACACTGGAAGATAACCCTTCACAGCCTTTGCAACCTG
TGCTTGGAGCTCCTAGGGGTCACCCTGCTCCATCCCAAGACAAGGGCCAGCACCCTCTGGAGGA
AGTCAAGGTACTGGCAGGCAGAGACCTTGCTGACCTTCCTGCTGGTGGTTCTGACACAGAGCCC
CATGGGGCTTCAAGTAAGCTGAGAGAAGACCAAAAAGGTGCTGCCCTCAAGGTGGCTGAAGCTG
TGAGGAAGCTGGTCCCAGGGGACTTGGAACCAGTGCACAAGCCAGACCCTGCTGAGGTGCCCAA
GAGTCCAGAGAAGCAGCTTGCCAAGGAGGTTGCCAGGCAGCGCCAAGATGTCTTTGGTGAAGGT
TCCCAAGAAAGGAAGGAAACTGGAAAGGATGCAGTGGCCCCTGGTGCTGATACTCAGAAAGAGG
CTGCCCAGCCTTTAGTGGGGGCAGAAGCTGAGGACTCTCACTCAAAATCCAGGCACTCAGAACC
CACCAAGGTCCCAGCTAGTGGGCCAGCAGGTATGGGCTTTCAGGCCCAAGCCAGGTTTCGGCAA
GAACCCCAGGTCATCTTTGACAAAAGTCAGGATTCTCACCCAGAGGTAAGAAGTGAGGGCCCCC
GAGGGGTTGGCATCCCTGCTGAGGAGCAGCACAGAGGAAGAGGGGCTGCCGCTATGCAAGAGGA
AAAGCAGAGACCAGATCCGAATTCTGGGCCCAAACTAGCTGTGCCTGGGGATCAGAAGCCTGAG
AATGCCAAACCTAACAGAGACCTGAAAGTGCAGGCTGGCTCTGACCTGCGGAGGAGACGGCGGG
ATCTCGCCTCTCCTCCAGAGCAGGAGCTGGCTCCAAAGGATGGAGTCATCATTAGCTTTAACTC
CCTCCCTAACGTACAGGTGAACGACCTCCGCAGTGCTCTGGACACCCAGCTCCGCCAGGCTGCA
GGGGCCGCATTACAGGTGGTGCACAGCCGGCAGATTAAACAGTTGTCTGGAGACCTGGAGGAAG
CCTGAGAACCTGGTCAGGGGAAGGCTGCTGCTAGACATTGGACGGCAGGCAGCCGGTGTCCTCT
GGCGACACCCTGACTGGAGGCCATGTTGTTATGTTCCCAAGTCCTTCATGATGAATTGCGAAAG
TCTACCCTGCCACCCAACCCTAGGCATCTGTCCCTCTGTGGCTTCACTTGCCCCAAGGCCACAC
CAAAGCACGCACTGGCCCTAGTATGGTGGGTCTTGAACCAGCCCAGGAGAAGCAGTGCTACATA
CAGTTCAGCTCCAGTGATGCACTGCGGCACCTCGGCTGTTCAGACTCAGTCTGGCAGTGCTGAC
AGCAAGGCAGGCAACTTTGAAGTTGCCAGTCTTCATCTAACTTGCAACCTGTGACAGCCAGATT
CCACTGACTAGATAAATTCCATGTTCTCCATAGAAGGAAACCTGCATCAGGGATGTCTGTCTGC
CTTGGGGTGGGTAGGACTTGACTTGGGTTGGGAAAGGAGGCACACAGCCCTCCTGGTTTTTATC
ATCCACATTCTTTGAACCTGATTATGAAGCAAAAAATAAAACACCACTAACAAGTAGTGAGTCA
AGTTGGTTTACCTAAAGGAAAACACATTCAGGATCCTGGATGATACCAAACCAGCTAGAGGCTA
GAGGTCATGGGGATACACGCCCCAGCCGTCTTCCTGAACCAGCTGAGTGCTGCTGGGGAAGCAA
CAGGCAACAGGCCCCCGTGCTGATCCCTGTTGTAGGGAGGGGTTGGACAATGAGCACAGGCTTG
CCACCAGCAAGCCCTGGGATGTATCTACACGGCTTTAGGCTCAGAGTAGAGCTGCCCTCTGTCC
AACTGCAGCTGTCAGGGTAGTGTCCTGGGAGTCAGAGCAGGAAGTCATGACTGTTGTCTTTGAG
CAGAGAATACTTGATATGTTTTGTCACTCACTCCCTTGCCCAGTAAGGAGACTGAGGGACAACA
GCCTGGTTTGTCCCCAAGCCCTGCCGTGAAGGGCCTGGAAGCACCAGGAGCCTCAGTGGAATCA
TACTTGGACCAGGCCACACCCTATTGTGTACCTGCTGCACCTCTTGAAATGTATTTTATTACAG
TTTATTTTTTTTTAATTTA

hide sequence

RefSeq Acc Id:

XM_006247946 ⟹ XP_006248008

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,436,579 (-)	NCBI
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI

Sequence:

show sequence

CTTCCTGGCAGAGTACACTCCGAAGGCGGAAGTTTGTGTGCCGGAGGCAGCGAAGCGGAGCTGA
GGTGTTGCTAGCGTTGCCTGCGGCGCTTCCGGGTCCCTGCTCCACTCTCGGGAGGCGGAGGCGG
GAACCTGAAACCATGGCTGTGAGGCTGCTGCGGAGTCTGACAGGGTCCGGAGGCTGATTTTGCG
ACGCCTGTCTGCGGGTCCCCTGATCCCGGTTTAGGGTTATCTAGGGTCGCGCCGTCCCGGCCCC
TAGACCCTCAAAATGACCGCCGCCTCCACCTCCAAGTGGGGGCTGGTCACGAACGTCGTAAACA
GCATAGTGGGGGTCAGCGTACTCACCATGCCTTTCTGCTTCAAACAGTGTGGCATTGTCCTGGG
GGCCCTGCTCCTGGTCTTCTGCTCCTGGATGACGCACCAGTCTTGCATGTTCTTGGTGAAGTCG
GCCAGCTTGAGCAAGAGGAGAACCTATGCCGGCCTGGCATTCCACGCCTACGGCAAGGCTGGGA
AGATGCTGGTGGAGACCAGCATGATTGGGCTGATGCTGGGATCCTGCATTACCTTCTATGTCGT
GATTGGTGACTTGGGGTCCAACTTCTTTGCTCCGCTGCTTGGATTACAGGTAACCAGGACCTTC
CGTGTATTCCTGCTCTTTGCAGTATCCCTGTGCATCGTCCTCCCACTCAGCCTGCAGAGAAACA
TGATGGCCTCCATCCAGTCCTTCAGTGCCATGGCACTCCTCTTCTACACTGTCTTCATGTTTGT
GATTGTGCTGTCCTCTTTTAAGCATGGCCTCTTTAGTGGGCAGTGGCTGCAGCGGGTCAGCTAC
ATTCGCTGGGAAGGCGTTTTCCGCTGTGTCCCCATCTTTGGCATGTCCTTTGCCTGTCAGTCCC
AGGTCCTGCCCACCTACGACAGCCTGGATGAGCCATCAGTGAAGACCATGAGTTCCATATTTGC
CTCCTCCCTCAACGTGGTCACCGCCTTCTATGTCATGGTGGGGTTTTTTGGTTACGTCAGCTTC
ACTGATGCCACCACAGGCAACGTGCTGATACACTTCCCCTCCAACCTGGTGACAGAGATGATCC
GAGTGGGCTTTGTGATGTCTGTGGCTGTCGGCTTCCCCATGATGATTCTGCCCTGCAGACAGGC
CTTGAACACACTGCTATTTGAGCAGCAGCAAAAAGACGGAACCTTTGCTGCAGGAGGGTACATG
CCCCCACTCCGGTTTAAAGTCCTCACCCTCTCGGTGGTGTTCGGAACCATGGTCGGTGGCGTCA
TGATCCCCAATGTGGAAACCATCCTTGGCTTCACAGGAGCAACGATGGGGAGCCTCATCTGCTT
CATCTGCCCGGCTCTGATCTATAAGAAAGCCCACAAGAATGCCCCCTCAGCCCAGGTGGTGCTC
TGGGTCGGCCTGGGCATCCTAGTGGTCAGCACACTCACCACCCTGTCTGTGAGCGAAGAAGCTC
CTCTGGACTTGACGCAAGGAGCTCGCAGCGGCCAGCGAGGAGATGCCGAGGGCGCGATGAAGGT
GGAGGCAGCCCGGCTATCAGTCCAGGATCCCGTTGTAGTCATGGCTGAGGATAGCCAAGAGAAG
CTAAAGCCAGCAGAGGACAAAGAGGTCCTGGAGCAGGCCCAGATTAAGGGGCCAGTGGATGTGC
CTGGAGGGGACACTCCCAAGGAGAAGCAGGAAGCTGCACAGCTGGATCGCCCAGGTCAAGGTAT
TGCTGTCCCTATGGGCGAGGCCCATCGCCACGAGCCTCCCATCCCTCATGATAAAGTGGTGGTG
GATGAAGGCCAGGACCAAGAAGGGCCAGAGGAGAAAAAGCCACCTCCCAAGCTCCCAGATGAAG
GAGACCCTGCAGGCAGGGGGCAGGGGGCACCACTTCTGCCTGAGTCAGAGAAGAAGCAGGACCC
TGAGAGGGGAGAGGAAGGAAAGAGACCTGAGCAAGTCCTGGCAGTAGGGGAAATTGAACGTCCT
CAGAAGATTCCAGAAGCAAATGGTCAGCCACCTGTCCAGCCTAGGAAGGAAGATTCCAGACCAG
GAAATAGGGATCTGCATCCAGTTCCCCAGGCCAGGGTCTCTGTGGAGCTGAATGATCTGGTGGC
AGGTGAAGGCAAGGAGTCTGCACAGAAGGCTGGAGGGGCCCCGTGGAAGCCCATGGAGAGTGCC
GTGGAGAGCAATATTGGTGGGAAGGCGGGCCTCGCTGTACAAAGGCCGGAGGCTGCAGAGCAGA
GGGAGAAGAACGAGGCTGAGCAACCGGGTGGAGACCAAGCAGGGAGCAAGTTGGAAGCTGGGAG
GGCAGAGATGCTGGACCATGCTGTACTGCTACAGGTGATCAAAGAGCAGCAGGTTCAGCAGAAG
CGCCTCTTGGACCAGCAGGAGAAGCTGCTTGCAGTGATTGAGGAGCAGCACAAGGAGATCCGGC
AGCAGCGACAGGAGGGTGAGGAGGACAAGCCTAAGCCTGCAGACATGCAGCCAGAGCCTGGGGC
GGCTGTACTCAGAGGACAGGAAGAGGAGGCTGAGCATGCTGGGGCCCCAGATGAGCATGCTGGG
GAGACACTGGAAGATAACCCTTCACAGCCTTTGCAACCTGTGCTTGGAGCTCCTAGGGGTCACC
CTGCTCCATCCCAAGACAAGGGCCAGCACCCTCTGGAGGAAGTCAAGGTACTGGCAGGCAGAGA
CCTTGCTGACCTTCCTGCTGGTGGTTCTGACACAGAGCCCCATGGGGCTTCAAGTAAGCTGAGA
GAAGACCAAAAAGGTGCTGCCCTCAAGGTGGCTGAAGCTGTGAGGAAGCTGGTCCCAGGGGACT
TGGAACCAGTGCACAAGCCAGACCCTGCTGAGGTGCCCAAGAGTCCAGAGAAGCAGCTTGCCAA
GGAGGTTGCCAGGCAGCGCCAAGATGTCTTTGGTGAAGGTTCCCAAGAAAGGAAGGAAACTGGA
AAGGATGCAGTGGCCCCTGGTGCTGATACTCAGAAAGAGGCTGCCCAGCCTTTAGTGGGGGCAG
AAGCTGAGGACTCTCACTCAAAATCCAGGCACTCAGAACCCACCAAGGTCCCAGCTAGTGGGCC
AGCAGGTATGGGCTTTCAGGCCCAAGCCAGGTTTCGGCAAGAACCCCAGGTCATCTTTGACAAA
AGTCAGGATTCTCACCCAGAGGTAAGAAGTGAGGGCCCCCGAGGGGTTGGCATCCCTGCTGAGG
AGCAGCACAGAGGAAGAGGGGCTGCCGCTATGCAAGAGGAAAAGCAGAGACCAGATCCGAATTC
TGGGCCCAAACTAGCTGTGCCTGGGGATCAGAAGCCTGAGAATGCCAAACCTAACAGAGACCTG
AAAGTGCAGGCTGGCTCTGACCTGCGGAGGAGACGGCGGGATCTCGCCTCTCCTCCAGAGCAGG
AGCTGGCTCCAAAGGATGGAGTCATCATTAGCTTTAACTCCCTCCCTAACGTACAGGTGAACGA
CCTCCGCAGTGCTCTGGACACCCAGCTCCGCCAGGCTGCAGGGGCCGCATTACAGGTGGTGCAC
AGCCGGCAGATTAAACAGTTGTCTGGAGACCTGGAGGAAGCCTGAGAACCTGGTCAGGGGAAGG
CTGCTGCTAGACATTGGACGGCAGGCAGCCGGTGTCCTCTGGCGACACCCTGACTGGAGGCCAT
GTTGTTATGTTCCCAAGTCCTTCATGATGAATTGCGAAAGTCTACCCTGCCACCCAACCCTAGG
CATCTGTCCCTCTGTGGCTTCACTTGCCCCAAGGCCACACCAAAGCACGCACTGGCCCTAGTAT
GGTGGGTCTTGAACCAGCCCAGGAGAAGCAGTGCTACATACAGTTCAGCTCCAGTGATGCACTG
CGGCACCTCGGCTGTTCAGACTCAGTCTGGCAGTGCTGACAGCAAGGCAGGCAACTTTGAAGTT
GCCAGTCTTCATCTAACTTGCAACCTGTGACAGCCAGATTCCACTGACTAGATAAATTCCATGT
TCTCCATAGAAGGAAACCTGCATCAGGGATGTCTGTCTGCCTTGGGGTGGGTAGGACTTGACTT
GGGTTGGGAAAGGAGGCACACAGCCCTCCTGGTTTTTATCATCCACATTCTTTGAACCTGATTA
TGAAGCAAAAAATAAAACACCACTAACAAGTAGTGAGTCAAGTTGGTTTACCTAAAGGAAAACA
CATTCAGGATCCTGGATGATACCAAACCAGCTAGAGGCTAGAGGTCATGGGGATACACGCCCCA
GCCGTCTTCCTGAACCAGCTGAGTGCTGCTGGGGAAGCAACAGGCAACAGGCCCCCGTGCTGAT
CCCTGTTGTAGGGAGGGGTTGGACAATGAGCACAGGCTTGCCACCAGCAAGCCCTGGGATGTAT
CTACACGGCTTTAGGCTCAGAGTAGAGCTGCCCTCTGTCCAACTGCAGCTGTCAGGGTAGTGTC
CTGGGAGTCAGAGCAGGAAGTCATGACTGTTGTCTTTGAGCAGAGAATACTTGATATGTTTTGT
CACTCACTCCCTTGCCCAGTAAGGAGACTGAGGGACAACAGCCTGGTTTGTCCCCAAGCCCTGC
CGTGAAGGGCCTGGAAGCACCAGGAGCCTCAGTGGAATCATACTTGGACCAGGCCACACCCTAT
TGTGTACCTGCTGCACCTCTTGAAATGTATTTTATTACAGTTTATTTTTTTTTAATTTA

hide sequence

RefSeq Acc Id:

XM_039086215 ⟹ XP_038942143

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,387,938 - 105,436,579 (-)	NCBI

RefSeq Acc Id:

XM_039086216 ⟹ XP_038942144

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,934,117 (-)	NCBI
mRatBN7.2	10	105,387,938 - 105,435,711 (-)	NCBI

RefSeq Acc Id:

XM_039086217 ⟹ XP_038942145

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,436,579 (-)	NCBI

RefSeq Acc Id:

XM_039086218 ⟹ XP_038942146

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI
mRatBN7.2	10	105,387,676 - 105,436,579 (-)	NCBI

RefSeq Acc Id:

XM_039086219 ⟹ XP_038942147

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,924,121 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,425,732 (-)	NCBI

RefSeq Acc Id:

XM_039086220 ⟹ XP_038942148

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,921,160 (-)	NCBI
mRatBN7.2	10	105,386,836 - 105,422,774 (-)	NCBI

RefSeq Acc Id:

XM_063269248 ⟹ XP_063125318

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,031 (-)	NCBI

RefSeq Acc Id:

XM_063269249 ⟹ XP_063125319

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,934,187 (-)	NCBI

RefSeq Acc Id:

XM_063269250 ⟹ XP_063125320

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,032 (-)	NCBI

RefSeq Acc Id:

XM_221195 ⟹ XP_221195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	105,885,789 - 105,935,039 (-)	NCBI
mRatBN7.2	10	105,387,384 - 105,436,601 (-)	NCBI
Rnor_6.0	10	109,284,054 - 109,333,907 (-)	NCBI
Rnor_5.0	10	108,882,342 - 108,931,899 (-)	NCBI
RGSC_v3.4	10	109,516,004 - 109,569,804 (-)	RGD

Sequence:

show sequence

CTTCCTGGCAGAGTACACTCCGAAGGCGGAAGTTTGTGTGCCGGAGGCAGCGAAGCGGAGCTGA
GGTGTTGCTAGCGTTGCCTGCGGCGCTTCCGGGTCCCTGCTCCACTCTCGGGAGGCGGAGGCGG
GAACCTGAAACCATGGCTGTGAGGCTGCTGCGGAGTCTGACAGGGTCCGGAGGCTGATTTTGCG
ACGCCTGTCTGCGGGTCCCCTGATCCCGGTTTAGGGTTATCTAGGGTCGCGCCGTCCCGGCCCC
TAGACCCTCAAAATGACCGCCGCCTCCACCTCCAAGTGGGGGCTGGTCACGAACGTCGTAAACA
GCATAGTGGGGGTCAGCGTACTCACCATGCCTTTCTGCTTCAAACAGTGTGGCATTGTCCTGGG
GGCCCTGCTCCTGGTCTTCTGCTCCTGGATGACGCACCAGTCTTGCATGTTCTTGGTGAAGTCG
GCCAGCTTGAGCAAGAGGAGAACCTATGCCGGCCTGGCATTCCACGCCTACGGCAAGGCTGGGA
AGATGCTGGTGGAGACCAGCATGATTGGGCTGATGCTGGGATCCTGCATTACCTTCTATGTCGT
GATTGGTGACTTGGGGTCCAACTTCTTTGCTCCGCTGCTTGGATTACAGGTAACCAGGACCTTC
CGTGTATTCCTGCTCTTTGCAGTATCCCTGTGCATCGTCCTCCCACTCAGCCTGCAGAGAAACA
TGATGGCCTCCATCCAGTCCTTCAGTGCCATGGCACTCCTCTTCTACACTGTCTTCATGTTTGT
GATTGTGCTGTCCTCTTTTAAGCATGGCCTCTTTAGTGGGCAGTGGCTGCAGCGGGTCAGCTAC
ATTCGCTGGGAAGGCGTTTTCCGCTGTGTCCCCATCTTTGGCATGTCCTTTGCCTGTCAGTCCC
AGGTCCTGCCCACCTACGACAGCCTGGATGAGCCATCAGTGAAGACCATGAGTTCCATATTTGC
CTCCTCCCTCAACGTGGTCACCGCCTTCTATGTCATGGTGGGGTTTTTTGGTTACGTCAGCTTC
ACTGATGCCACCACAGGCAACGTGCTGATACACTTCCCCTCCAACCTGGTGACAGAGATGATCC
GAGTGGGCTTTGTGATGTCTGTGGCTGTCGGCTTCCCCATGATGATTCTGCCCTGCAGACAGGC
CTTGAACACACTGCTATTTGAGCAGCAGCAAAAAGACGGAACCTTTGCTGCAGGAGGGTACATG
CCCCCACTCCGGTTTAAAGTCCTCACCCTCTCGGTGGTGTTCGGAACCATGGTCGGTGGCGTCA
TGATCCCCAATGTGGAAACCATCCTTGGCTTCACAGGAGCAACGATGGGGAGCCTCATCTGCTT
CATCTGCCCGGCTCTGATCTATAAGAAAGCCCACAAGAATGCCCCCTCAGCCCAGGTGGTGCTC
TGGGTCGGCCTGGGCATCCTAGTGGTCAGCACACTCACCACCCTGTCTGTGAGCGAAGAAGCTC
CTCTGGACTTGACGCAAGGAGCTCGCAGCGGCCAGCGAGGAGATGCCGAGGGCGCGATGAAGGT
GGAGGCAGCCCGGCTATCAGTCCAGGATCCCGTTGTAGTCATGGCTGAGGATAGCCAAGAGAAG
CTAAAGCCAGCAGAGGACAAAGAGGTCCTGGAGCAGGCCCAGATTAAGGGGCCAGTGGATGTGC
CTGGAGGGGACACTCCCAAGGAGAAGCAGGAAGCTGCACAGCTGGATCGCCCAGGTCAAGGTAT
TGCTGTCCCTATGGGCGAGGCCCATCGCCACGAGCCTCCCATCCCTCATGATAAAGTGGTGGTG
GATGAAGGCCAGGACCAAGAAGGGCCAGAGGAGAAAAAGCCACCTCCCAAGCTCCCAGATGAAG
GAGACCCTGCAGGCAGGGGGCAGGGGGCACCACTTCTGCCTGAGTCAGAGAAGAAGCAGGACCC
TGAGAGGGGAGAGGAAGGAAAGAGACCTGAGCAAGTCCTGGCAGTAGGGGAAATTGAACGTCCT
CAGAAGATTCCAGAAGCAAATGGTCAGCCACCTGTCCAGCCTAGGAAGGAAGATTCCAGACCAG
GAAATAGGGATCTGCATCCAGTTCCCCAGGCCAGGGTCTCTGTGGAGCTGAATGATCTGGTGGC
AGGTGAAGGCAAGGAGTCTGCACAGAAGGCTGGAGGGGCCCCGTGGAAGCCCATGGAGAGTGCC
GTGGAGAGCAATATTGGTGGGAAGGCGGGCCTCGCTGTACAAAGGCCGGAGGCTGCAGAGCAGA
GGGAGAAGAACGAGGCTGAGCAACCGGGTGGAGACCAAGCAGGGAGCAAGTTGGAAGAAGCTGG
GAGGGCAGAGATGCTGGACCATGCTGTACTGCTACAGGTGATCAAAGAGCAGCAGGTTCAGCAG
AAGCGCCTCTTGGACCAGCAGGAGAAGCTGCTTGCAGTGATTGAGGAGCAGCACAAGGAGATCC
GGCAGCAGCGACAGGAGGGTGAGGAGGACAAGCCTAAGCCTGCAGACATGCAGCCAGAGCCTGG
GGCGGCTGTACTCAGAGGACAGGAAGAGGAGGCTGAGCATGCTGGGGCCCCAGATGAGCATGCT
GGGGAGACACTGGAAGATAACCCTTCACAGCCTTTGCAACCTGTGCTTGGAGCTCCTAGGGGTC
ACCCTGCTCCATCCCAAGACAAGGGCCAGCACCCTCTGGAGGAAGTCAAGGTACTGGCAGGCAG
AGACCTTGCTGACCTTCCTGCTGGTGGTTCTGACACAGAGCCCCATGGGGCTTCAAGTAAGCTG
AGAGAAGACCAAAAAGGTGCTGCCCTCAAGGTGGCTGAAGCTGTGAGGAAGCTGGTCCCAGGGG
ACTTGGAACCAGTGCACAAGCCAGACCCTGCTGAGGTGCCCAAGAGTCCAGAGAAGCAGCTTGC
CAAGGAGGTTGCCAGGCAGCGCCAAGATGTCTTTGGTGAAGGTTCCCAAGAAAGGAAGGAAACT
GGAAAGGATGCAGTGGCCCCTGGTGCTGATACTCAGAAAGAGGCTGCCCAGCCTTTAGTGGGGG
CAGAAGCTGAGGACTCTCACTCAAAATCCAGGCACTCAGAACCCACCAAGGTCCCAGCTAGTGG
GCCAGCAGGTATGGGCTTTCAGGCCCAAGCCAGGTTTCGGCAAGAACCCCAGGTCATCTTTGAC
AAAAGTCAGGATTCTCACCCAGAGGTAAGAAGTGAGGGCCCCCGAGGGGTTGGCATCCCTGCTG
AGGAGCAGCACAGAGGAAGAGGGGCTGCCGCTATGCAAGAGGAAAAGCAGAGACCAGATCCGAA
TTCTGGGCCCAAACTAGCTGTGCCTGGGGATCAGAAGCCTGAGAATGCCAAACCTAACAGAGAC
CTGAAAGTGCAGGCTGGCTCTGACCTGCGGAGGAGACGGCGGGATCTCGCCTCTCCTCCAGAGC
AGGAGCTGGCTCCAAAGGATGGAGTCATCATTAGCTTTAACTCCCTCCCTAACGTACAGGTGAA
CGACCTCCGCAGTGCTCTGGACACCCAGCTCCGCCAGGCTGCAGGGGCCGCATTACAGGTGGTG
CACAGCCGGCAGATTAAACAGTTGTCTGGAGACCTGGAGGAAGCCTGAGAACCTGGTCAGGGGA
AGGCTGCTGCTAGACATTGGACGGCAGGCAGCCGGTGTCCTCTGGCGACACCCTGACTGGAGGC
CATGTTGTTATGTTCCCAAGTCCTTCATGATGAATTGCGAAAGTCTACCCTGCCACCCAACCCT
AGGCATCTGTCCCTCTGTGGCTTCACTTGCCCCAAGGCCACACCAAAGCACGCACTGGCCCTAG
TATGGTGGGTCTTGAACCAGCCCAGGAGAAGCAGTGCTACATACAGTTCAGCTCCAGTGATGCA
CTGCGGCACCTCGGCTGTTCAGACTCAGTCTGGCAGTGCTGACAGCAAGGCAGGCAACTTTGAA
GTTGCCAGTCTTCATCTAACTTGCAACCTGTGACAGCCAGATTCCACTGACTAGATAAATTCCA
TGTTCTCCATAGAAGGAAACCTGCATCAGGGATGTCTGTCTGCCTTGGGGTGGGTAGGACTTGA
CTTGGGTTGGGAAAGGAGGCACACAGCCCTCCTGGTTTTTATCATCCACATTCTTTGAACCTGA
TTATGAAGCAAAAAATAAAACACCACTAACAAGTAGTGAGTCAAGTTGGTTTACCTAAAGGAAA
ACACATTCAGGATCCTGGATGATACCAAACCAGCTAGAGGCTAGAGGTCATGGGGATACACGCC
CCAGCCGTCTTCCTGAACCAGCTGAGTGCTGCTGGGGAAGCAACAGGCAACAGGCCCCCGTGCT
GATCCCTGTTGTAGGGAGGGGTTGGACAATGAGCACAGGCTTGCCACCAGCAAGCCCTGGGATG
TATCTACACGGCTTTAGGCTCAGAGTAGAGCTGCCCTCTGTCCAACTGCAGCTGTCAGGGTAGT
GTCCTGGGAGTCAGAGCAGGAAGTCATGACTGTTGTCTTTGAGCAGAGAATACTTGATATGTTT
TGTCACTCACTCCCTTGCCCAGTAAGGAGACTGAGGGACAACAGCCTGGTTTGTCCCCAAGCCC
TGCCGTGAAGGGCCTGGAAGCACCAGGAGCCTCAGTGGAATCATACTTGGACCAGGCCACACCC
TATTGTGTACCTGCTGCACCTCTTGAAATGTATTTTATTACAGTTTATTTTTTTTTAATTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001363844	(Get FASTA)	NCBI Sequence Viewer
	XP_002727892	(Get FASTA)	NCBI Sequence Viewer
	XP_006248005	(Get FASTA)	NCBI Sequence Viewer
	XP_006248006	(Get FASTA)	NCBI Sequence Viewer
	XP_006248008	(Get FASTA)	NCBI Sequence Viewer
	XP_038942143	(Get FASTA)	NCBI Sequence Viewer
	XP_038942144	(Get FASTA)	NCBI Sequence Viewer
	XP_038942145	(Get FASTA)	NCBI Sequence Viewer
	XP_038942146	(Get FASTA)	NCBI Sequence Viewer
	XP_038942147	(Get FASTA)	NCBI Sequence Viewer
	XP_038942148	(Get FASTA)	NCBI Sequence Viewer
	XP_063125318	(Get FASTA)	NCBI Sequence Viewer
	XP_063125319	(Get FASTA)	NCBI Sequence Viewer
	XP_063125320	(Get FASTA)	NCBI Sequence Viewer
	XP_221195	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98794	(Get FASTA)	NCBI Sequence Viewer
	E9PT23	(Get FASTA)	NCBI Sequence Viewer
	EDM06817	(Get FASTA)	NCBI Sequence Viewer
	EDM06818	(Get FASTA)	NCBI Sequence Viewer
	EDM06819	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006225
	ENSRNOP00000081337
	ENSRNOP00000086955

RefSeq Acc Id:	XP_002727892 ⟸ XM_002727846
- Peptide Label:	isoform X1
- UniProtKB:	A6HLB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAASTSKWGLVTNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLS KRRTYAGLAFHAYGKAGKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGLQVTRTFRVFL LFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSFKHGLFSGQWLQRVSYIRWE GVFRCVPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTAFYVMVGFFGYVSFTDAT TGNVLIHFPSNLVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAGGYMPPLR FKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLWVGL GILVVSTLTTLSVSEEAPLDLTQGARSGQRGDAEGAMKVEAARLSVQDPVVVMAEDSQEKLKPA EDKEVLEQAQIKGPVDVPGGDTPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQ DQEGPEEKKPPPKLPDEGDPAGRGQGAPLLPESEKKQDPERGEEGKRPEQVLAVGEIERPQKIP EANGQPPVQPRKEDSRPGNRDLHPVPQARVSVELNDLVAGEGKESAQKAGGAPWKPMESAVESN IGGKAGLAVQRPEAAEQREKNEAEQPGGDQAGSKLEAEIKKLVAEAGRAEMLDHAVLLQVIKEQ QVQQKRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADMQPEPGAAVLRGQEEEAEHAGAP DEHAGETLEDNPSQPLQPVLGAPRGHPAPSQDKGQHPLEEVKVLAGRDLADLPAGGSDTEPHGA SSKLREDQKGAALKVAEAVRKLVPGDLEPVHKPDPAEVPKSPEKQLAKEVARQRQDVFGEGSQE RKETGKDAVAPGADTQKEAAQPLVGAEAEDSHSKSRHSEPTKVPASGPAGMGFQAQARFRQEPQ VIFDKSQDSHPEVRSEGPRGVGIPAEEQHRGRGAAAMQEEKQRPDPNSGPKLAVPGDQKPENAK PNRDLKVQAGSDLRRRRRDLASPPEQELAPKDGVIISFNSLPNVQVNDLRSALDTQLRQAAGAA LQVVHSRQIKQLSGDLEEA hide sequence

RefSeq Acc Id:	XP_221195 ⟸ XM_221195
- Peptide Label:	isoform X5
- UniProtKB:	E9PT23 (UniProtKB/TrEMBL), A0A8I5ZRR0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAASTSKWGLVTNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLS KRRTYAGLAFHAYGKAGKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGLQVTRTFRVFL LFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSFKHGLFSGQWLQRVSYIRWE GVFRCVPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTAFYVMVGFFGYVSFTDAT TGNVLIHFPSNLVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAGGYMPPLR FKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLWVGL GILVVSTLTTLSVSEEAPLDLTQGARSGQRGDAEGAMKVEAARLSVQDPVVVMAEDSQEKLKPA EDKEVLEQAQIKGPVDVPGGDTPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQ DQEGPEEKKPPPKLPDEGDPAGRGQGAPLLPESEKKQDPERGEEGKRPEQVLAVGEIERPQKIP EANGQPPVQPRKEDSRPGNRDLHPVPQARVSVELNDLVAGEGKESAQKAGGAPWKPMESAVESN IGGKAGLAVQRPEAAEQREKNEAEQPGGDQAGSKLEEAGRAEMLDHAVLLQVIKEQQVQQKRLL DQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADMQPEPGAAVLRGQEEEAEHAGAPDEHAGETL EDNPSQPLQPVLGAPRGHPAPSQDKGQHPLEEVKVLAGRDLADLPAGGSDTEPHGASSKLREDQ KGAALKVAEAVRKLVPGDLEPVHKPDPAEVPKSPEKQLAKEVARQRQDVFGEGSQERKETGKDA VAPGADTQKEAAQPLVGAEAEDSHSKSRHSEPTKVPASGPAGMGFQAQARFRQEPQVIFDKSQD SHPEVRSEGPRGVGIPAEEQHRGRGAAAMQEEKQRPDPNSGPKLAVPGDQKPENAKPNRDLKVQ AGSDLRRRRRDLASPPEQELAPKDGVIISFNSLPNVQVNDLRSALDTQLRQAAGAALQVVHSRQ IKQLSGDLEEA hide sequence

RefSeq Acc Id:	XP_006248008 ⟸ XM_006247946
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZRR0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAASTSKWGLVTNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLS KRRTYAGLAFHAYGKAGKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGLQVTRTFRVFL LFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSFKHGLFSGQWLQRVSYIRWE GVFRCVPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTAFYVMVGFFGYVSFTDAT TGNVLIHFPSNLVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAGGYMPPLR FKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLWVGL GILVVSTLTTLSVSEEAPLDLTQGARSGQRGDAEGAMKVEAARLSVQDPVVVMAEDSQEKLKPA EDKEVLEQAQIKGPVDVPGGDTPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQ DQEGPEEKKPPPKLPDEGDPAGRGQGAPLLPESEKKQDPERGEEGKRPEQVLAVGEIERPQKIP EANGQPPVQPRKEDSRPGNRDLHPVPQARVSVELNDLVAGEGKESAQKAGGAPWKPMESAVESN IGGKAGLAVQRPEAAEQREKNEAEQPGGDQAGSKLEAGRAEMLDHAVLLQVIKEQQVQQKRLLD QQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADMQPEPGAAVLRGQEEEAEHAGAPDEHAGETLE DNPSQPLQPVLGAPRGHPAPSQDKGQHPLEEVKVLAGRDLADLPAGGSDTEPHGASSKLREDQK GAALKVAEAVRKLVPGDLEPVHKPDPAEVPKSPEKQLAKEVARQRQDVFGEGSQERKETGKDAV APGADTQKEAAQPLVGAEAEDSHSKSRHSEPTKVPASGPAGMGFQAQARFRQEPQVIFDKSQDS HPEVRSEGPRGVGIPAEEQHRGRGAAAMQEEKQRPDPNSGPKLAVPGDQKPENAKPNRDLKVQA GSDLRRRRRDLASPPEQELAPKDGVIISFNSLPNVQVNDLRSALDTQLRQAAGAALQVVHSRQI KQLSGDLEEA hide sequence

RefSeq Acc Id:	XP_006248005 ⟸ XM_006247943
- Peptide Label:	isoform X2
- UniProtKB:	A6HLB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAASTSKWGLVTNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLS KRRTYAGLAFHAYGKAGKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGLQVTRTFRVFL LFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSFKHGLFSGQWLQRVSYIRWE GVFRCVPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTAFYVMVGFFGYVSFTDAT TGNVLIHFPSNLVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAGGYMPPLR FKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLWVGL GILVVSTLTTLSVSEEAPLDLTQGARSGQRGDAEGAMKVEAARLSVQDPVVVMAEDSQEKLKPA EDKEVLEQAQIKGPVDVPGGDTPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQ DQEGPEEKKPPPKLPDEGDPAGRGQGAPLLPESEKKQDPERGEEGKRPEQVLAVGEIERPQKIP EANGQPPVQPRKEDSRPGNRDLHPVPQARVSVELNDLVAGEGKESAQKAGGAPWKPMESAVESN IGGKAGLAVQRPEAAEQREKNEAEQPGGDQAGSKLEAEIKKLVAAGRAEMLDHAVLLQVIKEQQ VQQKRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADMQPEPGAAVLRGQEEEAEHAGAPD EHAGETLEDNPSQPLQPVLGAPRGHPAPSQDKGQHPLEEVKVLAGRDLADLPAGGSDTEPHGAS SKLREDQKGAALKVAEAVRKLVPGDLEPVHKPDPAEVPKSPEKQLAKEVARQRQDVFGEGSQER KETGKDAVAPGADTQKEAAQPLVGAEAEDSHSKSRHSEPTKVPASGPAGMGFQAQARFRQEPQV IFDKSQDSHPEVRSEGPRGVGIPAEEQHRGRGAAAMQEEKQRPDPNSGPKLAVPGDQKPENAKP NRDLKVQAGSDLRRRRRDLASPPEQELAPKDGVIISFNSLPNVQVNDLRSALDTQLRQAAGAAL QVVHSRQIKQLSGDLEEA hide sequence

RefSeq Acc Id:	XP_006248006 ⟸ XM_006247944
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A7H4 (UniProtKB/TrEMBL), A6HLB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAASTSKWGLVTNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLS KRRTYAGLAFHAYGKAGKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGLQVTRTFRVFL LFAVSLCIVLPLSLQRNMMASIQSFSAMALLFYTVFMFVIVLSSFKHGLFSGQWLQRVSYIRWE GVFRCVPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVVTAFYVMVGFFGYVSFTDAT TGNVLIHFPSNLVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAGGYMPPLR FKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLWVGL GILVVSTLTTLSVSEEAPLDLTQGARSGQRGDAEGAMKVEAARLSVQDPVVVMAEDSQEKLKPA EDKEVLEQAQIKGPVDVPGGDTPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQ DQEGPEEKKPPPKLPDEGDPAGRGQGAPLLPESEKKQDPERGEEGKRPEQVLAVGEIERPQKIP EANGQPPVQPRKEDSRPGNRDLHPVPQARVSVELNDLVAGEGKESAQKAGGAPWKPMESAVESN IGGKAGLAVQRPEAAEQREKNEAEQPGGDQAGSKLEAEIKKLVAEAGRAEMLDHAVLLQVIKEQ QVQQKRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPDMQPEPGAAVLRGQEEEAEHAGAPD EHAGETLEDNPSQPLQPVLGAPRGHPAPSQDKGQHPLEEVKVLAGRDLADLPAGGSDTEPHGAS SKLREDQKGAALKVAEAVRKLVPGDLEPVHKPDPAEVPKSPEKQLAKEVARQRQDVFGEGSQER KETGKDAVAPGADTQKEAAQPLVGAEAEDSHSKSRHSEPTKVPASGPAGMGFQAQARFRQEPQV IFDKSQDSHPEVRSEGPRGVGIPAEEQHRGRGAAAMQEEKQRPDPNSGPKLAVPGDQKPENAKP NRDLKVQAGSDLRRRRRDLASPPEQELAPKDGVIISFNSLPNVQVNDLRSALDTQLRQAAGAAL QVVHSRQIKQLSGDLEEA hide sequence

Ensembl Acc Id:

ENSRNOP00000006225 ⟸ ENSRNOT00000006225

RefSeq Acc Id:	NP_001363844 ⟸ NM_001376915
- UniProtKB:	A0A8L2Q2J1 (UniProtKB/TrEMBL), A0A8I5ZRR0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942145 ⟸ XM_039086217
- Peptide Label:	isoform X10
- UniProtKB:	A6HLB3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942147 ⟸ XM_039086219
- Peptide Label:	isoform X13
- UniProtKB:	A6HLB3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942148 ⟸ XM_039086220
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_038942146 ⟸ XM_039086218
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I5ZRR0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942143 ⟸ XM_039086215
- Peptide Label:	isoform X4
- UniProtKB:	A6HLB3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942144 ⟸ XM_039086216
- Peptide Label:	isoform X8
- UniProtKB:	A6HLB3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000081337 ⟸ ENSRNOT00000095802

Ensembl Acc Id:

ENSRNOP00000086955 ⟸ ENSRNOT00000094909

RefSeq Acc Id:	XP_063125320 ⟸ XM_063269250
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I5ZRR0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125318 ⟸ XM_063269248
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZRR0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125319 ⟸ XM_063269249
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZRR0 (UniProtKB/TrEMBL)

Protein Domains

Amino acid transporter transmembrane

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-E9PT23-F1-model_v2	AlphaFold	E9PT23	1-1099	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697956

Promoter ID:

EPDNEW_R8478

Type:

initiation region

Name:

Slc38a10_1

Description:

solute carrier family 38, member 10

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	109,333,872 - 109,333,932	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306356	AgrOrtholog
BioCyc Gene	G2FUF-22453	BioCyc
Ensembl Genes	ENSRNOG00000004604	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000006225	ENTREZGENE
	ENSRNOT00000094909	ENTREZGENE
	ENSRNOT00000095802	ENTREZGENE
IMAGE_CLONE	IMAGE:7375727	IMAGE-MGC_LOAD
InterPro	AA_transpt_TM	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:112835	IMAGE-MGC_LOAD
NCBI Gene	303740	ENTREZGENE
PANTHER	AMINO ACID TRANSPORTER	UniProtKB/Swiss-Prot
	SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 10-RELATED	UniProtKB/Swiss-Prot
Pfam	Aa_trans	UniProtKB/Swiss-Prot
PhenoGen	Slc38a10	PhenoGen
RatGTEx	ENSRNOG00000004604	RatGTEx
UniProt	A0A8I5ZRR0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A7H4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2Q2J1	ENTREZGENE, UniProtKB/TrEMBL
	A6HLB3	ENTREZGENE, UniProtKB/TrEMBL
	E9PT23	ENTREZGENE
	Q4G035_RAT	UniProtKB/TrEMBL
	S38AA_RAT	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-11	Slc38a10	solute carrier family 38, member 10	RGD1306356	similar to hypothetical protein MGC15523	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1306356	similar to hypothetical protein MGC15523	RGD1306356_predicted	similar to hypothetical protein MGC15523 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1306356_predicted	similar to hypothetical protein MGC15523 (predicted)	LOC303740_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC303740_predicted	similar to hypothetical protein MGC15523 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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