Wdr37 (WD repeat domain 37) - Rat Genome Database

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Gene: Wdr37 (WD repeat domain 37) Rattus norvegicus
Analyze
Symbol: Wdr37
Name: WD repeat domain 37
RGD ID: 1306189
Description: Predicted to be involved in lymphocyte homeostasis. Predicted to act upstream of or within corpus callosum development. Predicted to be located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in neurooculocardiogenitourinary syndrome. Orthologous to human WDR37 (WD repeat domain 37); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; aconitine; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC307075; WD repeat-containing protein 37
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81766,547,425 - 66,613,841 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1766,547,147 - 66,613,841 (+)EnsemblGRCr8
mRatBN7.21761,637,258 - 61,703,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1761,637,258 - 61,703,677 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1765,158,099 - 65,224,530 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01768,986,907 - 69,053,338 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01763,008,499 - 63,074,885 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01757,983,937 - 58,051,011 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1757,983,937 - 58,050,992 (+)Ensemblrn6Rnor6.0
Rnor_5.01759,789,206 - 59,855,683 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41772,563,069 - 72,628,890 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1754,421,462 - 54,487,842 (+)NCBICelera
RGSC_v3.11772,587,300 - 72,641,807 (+)NCBI
Cytogenetic Map17q12.1NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA,ISO)
nucleus  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:28131823   PMID:31327510  


Genomics

Comparative Map Data
Wdr37
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81766,547,425 - 66,613,841 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1766,547,147 - 66,613,841 (+)EnsemblGRCr8
mRatBN7.21761,637,258 - 61,703,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1761,637,258 - 61,703,677 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1765,158,099 - 65,224,530 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01768,986,907 - 69,053,338 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01763,008,499 - 63,074,885 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01757,983,937 - 58,051,011 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1757,983,937 - 58,050,992 (+)Ensemblrn6Rnor6.0
Rnor_5.01759,789,206 - 59,855,683 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41772,563,069 - 72,628,890 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1754,421,462 - 54,487,842 (+)NCBICelera
RGSC_v3.11772,587,300 - 72,641,807 (+)NCBI
Cytogenetic Map17q12.1NCBI
WDR37
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38101,056,385 - 1,132,372 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl101,049,265 - 1,160,991 (+)Ensemblhg38GRCh38
GRCh37101,102,325 - 1,178,312 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36101,092,776 - 1,168,237 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34101,092,797 - 1,168,106NCBI
Celera101,052,188 - 1,127,352 (+)NCBICelera
Cytogenetic Map10p15.3NCBI
HuRef101,041,318 - 1,116,635 (+)NCBIHuRef
CHM1_1101,100,893 - 1,178,215 (+)NCBICHM1_1
T2T-CHM13v2.0101,053,000 - 1,128,899 (+)NCBIT2T-CHM13v2.0
Wdr37
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39138,853,002 - 8,922,136 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl138,853,004 - 8,921,945 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38138,802,966 - 8,872,100 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl138,802,968 - 8,871,909 (-)Ensemblmm10GRCm38
MGSCv37138,802,214 - 8,870,976 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36138,802,214 - 8,870,976 (-)NCBIMGSCv36mm8
Celera138,747,168 - 8,815,705 (-)NCBICelera
Cytogenetic Map13A1NCBI
cM Map133.6NCBI
Wdr37
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542130,068,306 - 30,161,762 (-)Ensembl
ChiLan1.0NW_00495542130,097,046 - 30,161,762 (-)NCBIChiLan1.0ChiLan1.0
WDR37
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2813,582,276 - 13,665,002 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11013,587,145 - 13,670,319 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0101,093,957 - 1,172,209 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1101,140,167 - 1,217,263 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl101,140,562 - 1,217,263 (+)EnsemblpanPan2panpan1.1
WDR37
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1233,865,534 - 33,912,119 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl233,682,418 - 33,923,843 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha230,901,963 - 30,959,758 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0234,251,049 - 34,308,914 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl234,229,563 - 34,308,978 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1231,334,373 - 31,392,159 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0232,174,113 - 32,232,212 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0232,921,419 - 32,979,607 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Wdr37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934436,783,577 - 36,853,643 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648412,948,358 - 13,018,631 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648412,948,803 - 13,020,555 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDR37
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1068,427,192 - 68,535,143 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11068,416,058 - 68,529,662 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21075,322,822 - 75,361,681 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WDR37
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.191,011,478 - 1,085,569 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl91,011,726 - 1,082,773 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660516,065,581 - 6,142,557 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdr37
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247759,768,397 - 9,857,837 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247759,768,568 - 9,858,085 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Wdr37
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11422,517,600 - 22,572,256 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Wdr37
603 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1685
Count of miRNA genes:374
Interacting mature miRNAs:540
Transcripts:ENSRNOT00000022688
Prediction methods:Microtar, Miranda, Pita
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70210Cm15Cardiac mass QTL 156.5heart right ventricle mass (VT:0007033)heart right ventricle wet weight (CMO:0000072)173006647275066472Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172413612784432719Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)174238816487388164Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175819406487388164Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)173310464578104645Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)173803135483031354Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)175482950393515804Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174096801789341781Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172723344583975845Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)173803135483031354Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)172652205171522051Rat
1600398Edcs5Endometrial carcinoma susceptibility QTL 52.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)173544694975762341Rat
10450503Bp386Blood pressure QTL 3860.28arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172201970567019705Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172385892668858926Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172439059584432719Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)173803135483031354Rat
61466Niddm12Non-insulin dependent diabetes mellitus QTL 123.20.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)176515487293515804Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173803135483031354Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)173310464578104645Rat
12904736Cm121Cardiac mass QTL 1210.043heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)174238816487388164Rat
7394837Memor18Memory QTL 18exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)176109144668550213Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)174605012691050126Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172385892668858926Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172385892668858926Rat
4889891Eae32Experimental allergic encephalomyelitis QTL 324.80.0002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)172723344572233445Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172385892668858926Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175560459793006569Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172385892668858926Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)174265489587654895Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172385892668858926Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)173768787782687877Rat
7488963Bp369Blood pressure QTL 3690.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176369714782818564Rat
1300129Rf25Renal function QTL 253.03blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)174106235286062352Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172413612784432719Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173219953486201342Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172385892668858926Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2413612784432719Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172413612784432719Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173604553781045537Rat
2302365Gluco40Glucose level QTL 404.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)176456982086954580Rat

Markers in Region
RH132961  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81766,613,604 - 66,613,784 (+)Marker Load Pipeline
mRatBN7.21761,703,440 - 61,703,620 (+)MAPPERmRatBN7.2
Rnor_6.01758,050,788 - 58,050,967NCBIRnor6.0
Rnor_5.01759,855,479 - 59,855,658UniSTSRnor5.0
RGSC_v3.41772,628,686 - 72,628,865UniSTSRGSC3.4
Celera1754,487,638 - 54,487,817UniSTS
Cytogenetic Map17q12.1UniSTS
BE098513  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21761,652,213 - 61,652,363 (+)MAPPERmRatBN7.2
Rnor_6.01757,998,891 - 57,999,040NCBIRnor6.0
Rnor_5.01759,804,160 - 59,804,309UniSTSRnor5.0
RGSC_v3.41772,578,023 - 72,578,172UniSTSRGSC3.4
Celera1754,436,423 - 54,436,572UniSTS
RH 3.4 Map17610.69UniSTS
Cytogenetic Map17q12.1UniSTS
RH139889  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21761,637,480 - 61,637,678 (+)MAPPERmRatBN7.2
Rnor_6.01757,984,160 - 57,984,357NCBIRnor6.0
Rnor_5.01759,789,429 - 59,789,626UniSTSRnor5.0
RGSC_v3.41772,563,292 - 72,563,489UniSTSRGSC3.4
Celera1754,421,685 - 54,421,882UniSTS
RH 3.4 Map17611.4UniSTS
Cytogenetic Map17q12.1UniSTS
AI408982  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21761,670,909 - 61,671,005 (+)MAPPERmRatBN7.2
Rnor_6.01758,017,589 - 58,017,684NCBIRnor6.0
Rnor_5.01759,822,858 - 59,822,953UniSTSRnor5.0
RGSC_v3.41772,596,721 - 72,596,816UniSTSRGSC3.4
Celera1754,455,112 - 54,455,207UniSTS
RH 3.4 Map17611.1UniSTS
Cytogenetic Map17q12.1UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000022688   ⟹   ENSRNOP00000022688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1766,547,425 - 66,613,809 (+)Ensembl
mRatBN7.2 Ensembl1761,637,258 - 61,703,645 (+)Ensembl
Rnor_6.0 Ensembl1757,983,937 - 58,050,992 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100659   ⟹   ENSRNOP00000091653
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1766,560,850 - 66,613,839 (+)Ensembl
mRatBN7.2 Ensembl1761,661,981 - 61,703,677 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104845   ⟹   ENSRNOP00000086670
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1766,560,819 - 66,613,821 (+)Ensembl
mRatBN7.2 Ensembl1761,650,641 - 61,703,677 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118791   ⟹   ENSRNOP00000080330
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1761,650,644 - 61,659,732 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000123865   ⟹   ENSRNOP00000101152
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1766,560,140 - 66,613,823 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000136396   ⟹   ENSRNOP00000107974
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1766,572,220 - 66,611,327 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000165066   ⟹   ENSRNOP00000105222
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1766,547,147 - 66,613,841 (+)Ensembl
RefSeq Acc Id: NM_001107362   ⟹   NP_001100832
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81766,547,425 - 66,613,809 (+)NCBI
mRatBN7.21761,637,258 - 61,703,645 (+)NCBI
Rnor_6.01757,983,937 - 58,050,992 (+)NCBI
Rnor_5.01759,789,206 - 59,855,683 (+)NCBI
RGSC_v3.41772,563,069 - 72,628,890 (+)RGD
Celera1754,421,462 - 54,487,842 (+)RGD
Sequence:
RefSeq Acc Id: NM_001399297   ⟹   NP_001386226
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81766,560,817 - 66,613,841 (+)NCBI
mRatBN7.21761,650,652 - 61,703,677 (+)NCBI
RefSeq Acc Id: XM_039095769   ⟹   XP_038951697
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81766,560,831 - 66,613,828 (+)NCBI
mRatBN7.21761,650,679 - 61,703,664 (+)NCBI
RefSeq Acc Id: XM_039095770   ⟹   XP_038951698
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81766,570,960 - 66,613,828 (+)NCBI
mRatBN7.21761,661,336 - 61,703,664 (+)NCBI
RefSeq Acc Id: XM_039095771   ⟹   XP_038951699
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81766,560,816 - 66,609,768 (+)NCBI
mRatBN7.21761,650,659 - 61,699,604 (+)NCBI
RefSeq Acc Id: NP_001100832   ⟸   NM_001107362
- Peptide Label: isoform 2
- UniProtKB: D3ZQ02 (UniProtKB/TrEMBL),   A6KRN7 (UniProtKB/TrEMBL),   A0A8I6GF74 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000022688   ⟸   ENSRNOT00000022688
RefSeq Acc Id: XP_038951699   ⟸   XM_039095771
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038951697   ⟸   XM_039095769
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GF74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038951698   ⟸   XM_039095770
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AE33 (UniProtKB/TrEMBL),   A0A8I6GF74 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000086670   ⟸   ENSRNOT00000104845
Ensembl Acc Id: ENSRNOP00000080330   ⟸   ENSRNOT00000118791
Ensembl Acc Id: ENSRNOP00000091653   ⟸   ENSRNOT00000100659
RefSeq Acc Id: NP_001386226   ⟸   NM_001399297
- Peptide Label: isoform 1
- UniProtKB: A0A8I6GF74 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000107974   ⟸   ENSRNOT00000136396
Ensembl Acc Id: ENSRNOP00000105222   ⟸   ENSRNOT00000165066
Ensembl Acc Id: ENSRNOP00000101152   ⟸   ENSRNOT00000123865

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZQ02-F1-model_v2 AlphaFold D3ZQ02 1-449 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306189 AgrOrtholog
BioCyc Gene G2FUF-8881 BioCyc
Ensembl Genes ENSRNOG00000016834 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022688 ENTREZGENE
  ENSRNOT00000022688.7 UniProtKB/TrEMBL
  ENSRNOT00000100659.2 UniProtKB/TrEMBL
  ENSRNOT00000104845 ENTREZGENE
  ENSRNOT00000104845.2 UniProtKB/TrEMBL
  ENSRNOT00000123865 ENTREZGENE
  ENSRNOT00000123865.1 UniProtKB/TrEMBL
  ENSRNOT00000136396 ENTREZGENE
  ENSRNOT00000136396.1 UniProtKB/TrEMBL
  ENSRNOT00000165066.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
InterPro G-protein_beta_WD-40_rep UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
KEGG Report rno:307075 UniProtKB/TrEMBL
NCBI Gene 307075 ENTREZGENE
PANTHER WD REPEAT-CONTAINING PROTEIN 37 UniProtKB/TrEMBL
  WD40 REPEAT PROTEIN 12, 37 UniProtKB/TrEMBL
Pfam WD40 UniProtKB/TrEMBL
PhenoGen Wdr37 PhenoGen
PRINTS GPROTEINBRPT UniProtKB/TrEMBL
PROSITE WD_REPEATS_1 UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016834 RatGTEx
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP WD40_like UniProtKB/TrEMBL
UniProt A0A8I6AE33 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GF74 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L5T2_RAT UniProtKB/TrEMBL
  A0ABK0LE87_RAT UniProtKB/TrEMBL
  A0ABK0LQ94_RAT UniProtKB/TrEMBL
  A6KRN7 ENTREZGENE, UniProtKB/TrEMBL
  D3ZQ02 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Wdr37  WD repeat domain 37   Wdr37_predicted  WD repeat domain 37 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Wdr37_predicted  WD repeat domain 37 (predicted)      Symbol and Name status set to approved 70820 APPROVED