Ube2g2 (ubiquitin-conjugating enzyme E2G 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ube2g2 (ubiquitin-conjugating enzyme E2G 2) Rattus norvegicus
Analyze
Symbol: Ube2g2
Name: ubiquitin-conjugating enzyme E2G 2
RGD ID: 1304860
Description: Predicted to enable identical protein binding activity and ubiquitin conjugating enzyme activity. Predicted to be involved in several processes, including cellular response to interferon-beta; negative regulation of retrograde protein transport, ER to cytosol; and proteolysis involved in protein catabolic process. Predicted to be located in lipid droplet. Predicted to be active in cytosol and endoplasmic reticulum. Orthologous to human UBE2G2 (ubiquitin conjugating enzyme E2 G2); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; Parkinson's disease pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC294331; ubiquitin-conjugating enzyme E2 G2; ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82010,983,322 - 11,005,060 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2010,983,325 - 11,005,187 (-)EnsemblGRCr8
mRatBN7.22010,983,734 - 11,005,468 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2010,983,742 - 11,005,447 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2011,683,236 - 11,704,970 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02011,044,204 - 11,065,938 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02011,515,952 - 11,537,686 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02011,700,089 - 11,721,823 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2011,700,089 - 11,721,838 (-)Ensemblrn6Rnor6.0
Rnor_5.02013,866,043 - 13,887,894 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42011,367,545 - 11,389,283 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2012,488,476 - 12,510,211 (-)NCBICelera
RGSC_v3.12011,367,771 - 11,389,479 (-)NCBI
Cytogenetic Map20p12NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-di-tert-butyl-4-methylphenol  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenic trichloride  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
clodronic acid  (ISO)
cobalt dichloride  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
Di-n-octyl phthalate  (ISO)
dicrotophos  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
endosulfan  (EXP)
ethyl methanesulfonate  (ISO)
fenofibrate  (EXP)
flutamide  (EXP)
fulvestrant  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
ifosfamide  (ISO)
L-serine  (ISO)
metformin  (EXP)
methyl methanesulfonate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
paracetamol  (EXP,ISO)
pirinixic acid  (ISO)
resveratrol  (ISO)
sodium arsenite  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zinc sulfate  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IBA,ISO)
endoplasmic reticulum  (IBA,IEA,ISO)
lipid droplet  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11278356   PMID:12477932   PMID:16780588   PMID:17310145   PMID:19103148   PMID:19223579   PMID:20061386   PMID:21628527   PMID:22607976   PMID:24366945   PMID:24882218   PMID:25660456  
PMID:37558718  


Genomics

Comparative Map Data
Ube2g2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82010,983,322 - 11,005,060 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2010,983,325 - 11,005,187 (-)EnsemblGRCr8
mRatBN7.22010,983,734 - 11,005,468 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2010,983,742 - 11,005,447 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2011,683,236 - 11,704,970 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02011,044,204 - 11,065,938 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02011,515,952 - 11,537,686 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02011,700,089 - 11,721,823 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2011,700,089 - 11,721,838 (-)Ensemblrn6Rnor6.0
Rnor_5.02013,866,043 - 13,887,894 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42011,367,545 - 11,389,283 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2012,488,476 - 12,510,211 (-)NCBICelera
RGSC_v3.12011,367,771 - 11,389,479 (-)NCBI
Cytogenetic Map20p12NCBI
UBE2G2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382144,768,580 - 44,801,820 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2144,768,580 - 44,801,826 (-)Ensemblhg38GRCh38
GRCh372146,188,495 - 46,221,735 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362145,013,383 - 45,046,166 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342145,013,383 - 45,046,166NCBI
Celera2131,296,281 - 31,329,066 (-)NCBICelera
Cytogenetic Map21q22.3NCBI
HuRef2131,562,705 - 31,595,904 (-)NCBIHuRef
CHM1_12145,749,021 - 45,782,288 (-)NCBICHM1_1
T2T-CHM13v2.02143,128,837 - 43,162,088 (-)NCBIT2T-CHM13v2.0
Ube2g2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391077,458,155 - 77,481,824 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1077,458,109 - 77,481,827 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381077,622,321 - 77,645,990 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1077,622,275 - 77,645,993 (+)Ensemblmm10GRCm38
MGSCv371077,085,066 - 77,108,735 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361077,066,037 - 77,089,706 (+)NCBIMGSCv36mm8
Celera1078,665,416 - 78,689,086 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Ube2g2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540741,683,720 - 41,724,014 (-)Ensembl
ChiLan1.0NW_00495540741,683,771 - 41,724,014 (-)NCBIChiLan1.0ChiLan1.0
UBE2G2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22240,814,001 - 40,849,382 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12135,684,917 - 35,720,311 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02131,062,516 - 31,095,044 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12144,355,235 - 44,388,373 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2144,355,235 - 44,388,373 (-)EnsemblpanPan2panpan1.1
UBE2G2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13138,432,855 - 38,470,202 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3138,433,332 - 38,470,136 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3137,630,121 - 37,667,454 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03138,034,401 - 38,071,735 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3138,033,321 - 38,071,702 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13137,897,107 - 37,934,410 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03137,857,961 - 37,895,261 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03138,373,360 - 38,410,671 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ube2g2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497137,689,273 - 37,724,074 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367781,414,348 - 1,440,950 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367781,414,410 - 1,440,949 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UBE2G2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13207,444,533 - 207,471,796 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113207,444,529 - 207,471,826 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213217,375,639 - 217,402,926 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UBE2G2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1288,481,221 - 88,512,998 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl288,483,204 - 88,498,067 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605416,654,955 - 16,687,985 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ube2g2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474530,353,369 - 30,382,782 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474530,353,530 - 30,382,780 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ube2g2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v118965,751 - 988,026 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ube2g2
91 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:213
Count of miRNA genes:150
Interacting mature miRNAs:160
Transcripts:ENSRNOT00000001636
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)20418947649189476Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20126925056Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20133724594Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126128279Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804392029865039Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600300Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20153308346533083Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124164241Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20134066551Rat
631265Iresp1Immunoglobin response QTL18.3blood anti-double stranded DNA antibody amount (VT:0004762)serum anti-DNA antibody level (CMO:0001533)20904109911115921Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129193376Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20127341128Rat
1598870Bp289Blood pressure QTL 2892.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)20821635953216359Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129193376Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129193376Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129193376Rat
1581577Pur15Proteinuria QTL 154.380.0002urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)20804392015089182Rat
1598858Cm61Cardiac mass QTL 613.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)20821635953216359Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129193376Rat
61432Cia1Collagen induced arthritis QTL 1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)20114100378Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578510Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600300Rat

Markers in Region
RH127921  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22010,983,764 - 10,983,969 (+)MAPPERmRatBN7.2
Rnor_6.02011,700,120 - 11,700,324NCBIRnor6.0
Rnor_5.02013,866,074 - 13,866,278UniSTSRnor5.0
RGSC_v3.42011,367,576 - 11,367,780UniSTSRGSC3.4
Celera2012,488,507 - 12,488,713UniSTS
Cytogenetic Map20p12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 92 59 6 356 192 11 140 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000001636   ⟹   ENSRNOP00000001636
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2010,983,325 - 10,997,806 (-)Ensembl
mRatBN7.2 Ensembl2010,983,753 - 11,005,434 (-)Ensembl
Rnor_6.0 Ensembl2011,700,089 - 11,721,838 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116055   ⟹   ENSRNOP00000077091
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2010,983,742 - 10,997,484 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117806   ⟹   ENSRNOP00000077970
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2010,983,742 - 10,998,214 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118834   ⟹   ENSRNOP00000093922
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2010,983,325 - 11,005,187 (-)Ensembl
mRatBN7.2 Ensembl2010,983,742 - 11,005,447 (-)Ensembl
RefSeq Acc Id: NM_001106380   ⟹   NP_001099850
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82010,983,326 - 11,005,060 (-)NCBI
mRatBN7.22010,983,734 - 11,005,468 (-)NCBI
Rnor_6.02011,700,089 - 11,721,823 (-)NCBI
Rnor_5.02013,866,043 - 13,887,894 (-)NCBI
RGSC_v3.42011,367,545 - 11,389,283 (-)RGD
Celera2012,488,476 - 12,510,211 (-)RGD
Sequence:
RefSeq Acc Id: XM_063279055   ⟹   XP_063135125
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82010,983,322 - 11,003,798 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001099850 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135125 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI66733 (Get FASTA)   NCBI Sequence Viewer  
  EDL97093 (Get FASTA)   NCBI Sequence Viewer  
  EDL97094 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000001636
  ENSRNOP00000001636.7
  ENSRNOP00000093922.2
RefSeq Acc Id: NP_001099850   ⟸   NM_001106380
- UniProtKB: B2RYD0 (UniProtKB/TrEMBL),   F1MAH9 (UniProtKB/TrEMBL),   A0A8I6GKI1 (UniProtKB/TrEMBL),   A0A8J8Y678 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001636   ⟸   ENSRNOT00000001636
Ensembl Acc Id: ENSRNOP00000077091   ⟸   ENSRNOT00000116055
Ensembl Acc Id: ENSRNOP00000077970   ⟸   ENSRNOT00000117806
Ensembl Acc Id: ENSRNOP00000093922   ⟸   ENSRNOT00000118834
RefSeq Acc Id: XP_063135125   ⟸   XM_063279055
- Peptide Label: isoform X1
- UniProtKB: A6JK78 (UniProtKB/TrEMBL),   A0A8J8Y678 (UniProtKB/TrEMBL)
Protein Domains
UBC core

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RYD0-F1-model_v2 AlphaFold B2RYD0 1-165 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701502
Promoter ID:EPDNEW_R12026
Type:initiation region
Name:Ube2g2_1
Description:ubiquitin-conjugating enzyme E2G 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02011,721,789 - 11,721,849EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304860 AgrOrtholog
BioCyc Gene G2FUF-4243 BioCyc
Ensembl Genes ENSRNOG00000001222 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000001636 ENTREZGENE
  ENSRNOT00000001636.9 UniProtKB/TrEMBL
  ENSRNOT00000118834.2 UniProtKB/TrEMBL
Gene3D-CATH 3.10.110.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7936238 IMAGE-MGC_LOAD
InterPro Ub_conjugating_enzyme UniProtKB/TrEMBL
  UBQ-conjugat_E2 UniProtKB/TrEMBL
  UBQ-conjugating_AS UniProtKB/TrEMBL
  UBQ-conjugating_enzyme/RWD UniProtKB/TrEMBL
KEGG Report rno:294331 UniProtKB/TrEMBL
MGC_CLONE MGC:188457 IMAGE-MGC_LOAD
NCBI Gene 294331 ENTREZGENE
PANTHER UBIQUITIN-CONJUGATING ENZYME E2 UniProtKB/TrEMBL
Pfam UQ_con UniProtKB/TrEMBL
PhenoGen Ube2g2 PhenoGen
PROSITE UBIQUITIN_CONJUGAT_1 UniProtKB/TrEMBL
  UBIQUITIN_CONJUGAT_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001222 RatGTEx
SMART UBCc UniProtKB/TrEMBL
Superfamily-SCOP UBQ-conjugat/RWD-like UniProtKB/TrEMBL
UniProt A0A8I6GKI1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8J8Y678 ENTREZGENE, UniProtKB/TrEMBL
  A6JK78 ENTREZGENE, UniProtKB/TrEMBL
  B2RYD0 ENTREZGENE, UniProtKB/TrEMBL
  F1MAH9 ENTREZGENE
UniProt Secondary F1MAH9 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-01 Ube2g2  ubiquitin-conjugating enzyme E2G 2  Ube2g2  ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-25 Ube2g2  ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)  Ube2g2  ubiquitin-conjugating enzyme E2G 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Ube2g2  ubiquitin-conjugating enzyme E2G 2   Ube2g2_predicted  ubiquitin-conjugating enzyme E2G 2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Ube2g2_predicted  ubiquitin-conjugating enzyme E2G 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED