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Gene: Ctdspl (CTD small phosphatase like) Rattus norvegicus

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Symbol:

Ctdspl

Name:

CTD small phosphatase like

RGD ID:

1304841

Description:

Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of G1/S transition of mitotic cell cycle. Orthologous to human CTDSPL (CTD small phosphatase like); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; INTERACTS WITH (+)-schisandrin B; 1,3-dinitrobenzene; 2,2',5,5'-tetrachlorobiphenyl.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like; CTD small phosphatase-like protein; LOC301056

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CTDSPL (CTD small phosphatase like)	HGNC	Ensembl, NCBI, OrthoDB, Panther
Mus musculus (house mouse):	Ctdspl (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ctdspl (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CTDSPL (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CTDSPL (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ctdspl (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CTDSPL (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CTDSPL (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ctdspl (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ctdspl (CTD small phosphatase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CTDSP1 (CTD small phosphatase 1)	HGNC	OrthoDB
Homo sapiens (human):	GBF1 (golgi brefeldin A resistant guanine nucleotide exchange factor 1)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Ctdspl (CTD small phosphatase like)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Mus musculus (house mouse):	Ctdspl (CTD small phosphatase like)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CTDSPL (CTD small phosphatase like)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CTDSPL (CTD small phosphatase like)	Alliance	DIOPT (HGNC\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	ctdsplb (CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	ctdsplb (CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b)	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ctdspla (CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG5830	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG5830	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PSR1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PSR1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PSR2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PSR2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	scpl-1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ctdspl	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ctdspl	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	127,520,478 - 127,644,999 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	127,520,499 - 127,644,999 (+)	Ensembl				GRCr8
mRatBN7.2	8	118,642,729 - 118,767,238 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	118,642,672 - 118,767,117 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	124,244,175 - 124,368,918 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	122,443,118 - 122,567,868 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	120,275,667 - 120,400,578 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	128,382,709 - 128,507,242 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	130,485,095 - 130,609,632 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	128,971,032 - 129,095,568 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	120,378,506 - 120,503,047 (+)	NCBI		F344_StmMcwi
Rnor_6.0	8	127,065,292 - 127,726,248 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	127,702,534 - 127,726,127 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	126,919,687 - 126,943,278 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	123,960,578 - 123,993,452 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	117,907,827 - 117,940,703 (+)	NCBI		Celera
RGSC_v3.1	8	123,974,546 - 124,009,969 (+)	NCBI
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

lung non-small cell carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dimethylhydrazine (ISO)

1,3-dinitrobenzene (EXP)

17alpha-ethynylestradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

antirheumatic drug (ISO)

arachidonic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

cyclosporin A (ISO)

DDE (ISO)

dexamethasone (ISO)

dorsomorphin (ISO)

fenvalerate (EXP)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

glyphosate (EXP)

indometacin (ISO)

lipopolysaccharide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

mitomycin C (ISO)

nickel atom (ISO)

okadaic acid (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

paricalcitol (ISO)

phenobarbital (ISO)

phosphorus atom (ISO)

phosphorus(.) (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

progesterone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulforaphane (ISO)

sunitinib (ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

thiram (ISO)

topotecan (EXP)

triacsin C (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of G1/S transition of mitotic cell cycle (IEA,ISO)

negative regulation of protein phosphorylation (ISO)

regulation of transcription by RNA polymerase II (IEA)

Molecular Function

hydrolase activity (IEA)

phosphatase activity (IEA)

phosphoprotein phosphatase activity (IEA)

protein binding (ISO)

protein serine/threonine phosphatase activity (IEA)

RNA polymerase II CTD heptapeptide repeat phosphatase activity (IBA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Bone morphogenetic proteins signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Genetic and epigenetic analysis of non-small cell lung cancer with NotI-microarrays.	Dmitriev AA, etal., Epigenetics. 2012 May;7(5):502-13. doi: 10.4161/epi.19801. Epub 2012 May 1.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19056867	PMID:22210897

Genomics

Comparative Map Data

Ctdspl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	127,520,478 - 127,644,999 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	127,520,499 - 127,644,999 (+)	Ensembl				GRCr8
mRatBN7.2	8	118,642,729 - 118,767,238 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	118,642,672 - 118,767,117 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	124,244,175 - 124,368,918 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	122,443,118 - 122,567,868 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	120,275,667 - 120,400,578 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	128,382,709 - 128,507,242 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	130,485,095 - 130,609,632 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	128,971,032 - 129,095,568 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	120,378,506 - 120,503,047 (+)	NCBI		F344_StmMcwi
Rnor_6.0	8	127,065,292 - 127,726,248 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	127,702,534 - 127,726,127 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	126,919,687 - 126,943,278 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	123,960,578 - 123,993,452 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	117,907,827 - 117,940,703 (+)	NCBI		Celera
RGSC_v3.1	8	123,974,546 - 124,009,969 (+)	NCBI
Cytogenetic Map	8	q32	NCBI

CTDSPL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	37,861,880 - 37,984,469 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	37,861,880 - 37,984,469 (+)	Ensembl			hg38	GRCh38
GRCh37	3	37,903,371 - 38,025,960 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	37,878,673 - 38,000,964 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	37,878,672 - 38,000,964	NCBI
Celera	3	37,838,040 - 37,960,332 (+)	NCBI		Celera
Cytogenetic Map	3	p22.2	NCBI
HuRef	3	37,846,293 - 37,968,646 (+)	NCBI		HuRef
CHM1_1	3	37,855,336 - 37,977,609 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	37,866,043 - 37,988,649 (+)	NCBI		T2T-CHM13v2.0

Ctdspl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	118,751,313 - 118,873,187 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	118,755,521 - 118,873,066 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	118,926,536 - 119,044,119 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	118,926,453 - 119,043,998 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	118,835,654 - 118,953,237 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	118,775,151 - 118,892,696 (+)	NCBI		MGSCv36	mm8
Celera	9	119,394,549 - 119,512,016 (+)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	71.07	NCBI

Ctdspl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	4,705,664 - 4,831,726 (+)	Ensembl
ChiLan1.0	NW_004955421	4,705,664 - 4,831,463 (+)	NCBI	ChiLan1.0	ChiLan1.0

CTDSPL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	37,816,360 - 37,938,738 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	37,821,114 - 37,943,502 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	37,761,101 - 37,883,330 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	38,093,899 - 38,166,485 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	38,127,971 - 38,166,485 (+)	Ensembl			panPan2	panpan1.1

CTDSPL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	7,616,264 - 7,760,595 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	7,725,446 - 7,758,067 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	7,687,460 - 7,802,513 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	7,934,233 - 8,049,568 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	23	7,748,828 - 7,863,990 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	7,889,843 - 8,005,071 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	7,882,182 - 7,997,474 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ctdspl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	194,090,974 - 194,201,910 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	27,228,036 - 27,340,483 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	27,228,512 - 27,340,483 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTDSPL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	22,707,444 - 22,825,400 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	22,707,736 - 22,828,773 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	24,871,071 - 24,994,198 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTDSPL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	1,418,855 - 1,536,527 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	1,418,848 - 1,536,457 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	10,149,434 - 10,267,766 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ctdspl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624773	20,158,045 - 20,290,992 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624773	20,154,468 - 20,290,975 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ctdspl
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	110,161,354 - 110,280,713 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	60
Count of miRNA genes:	58
Interacting mature miRNAs:	59
Transcripts:	ENSRNOT00000075793
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	102413464	132782436	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	103375781	129871912	Rat
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	105462581	132782436	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
634332	Pia18	Pristane induced arthritis QTL 18	4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	84192326	132782436	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	85348065	130348065	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	91340911	131690273	Rat
10450865	Bw175	Body weight QTL 175	4.1		total fat pad mass (VT:0015008)	adipose tissue molecular composition measurement (CMO:0000484)	8	84192326	129192326	Rat

Markers in Region

D8Rat118

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,649,006 - 118,649,220 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,609,234 - 127,609,447	NCBI	Rnor6.0
Rnor_5.0	8	126,827,614 - 126,827,827	UniSTS	Rnor5.0
RGSC_v3.4	8	123,875,958 - 123,876,328	RGD	RGSC3.4
RGSC_v3.4	8	123,876,071 - 123,876,284	UniSTS	RGSC3.4
Celera	8	117,824,315 - 117,824,528	UniSTS
RGSC_v3.1	8	123,895,808 - 123,896,021	RGD
RH 3.4 Map	8	1292.1	RGD
RH 3.4 Map	8	1292.1	UniSTS
RH 2.0 Map	8	999.3	RGD
SHRSP x BN Map	8	81.87	RGD
Cytogenetic Map	8	q32	UniSTS

D8Got194

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,657,930 - 118,658,059 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,618,022 - 127,618,150	NCBI	Rnor6.0
Rnor_5.0	8	126,835,833 - 126,835,961	UniSTS	Rnor5.0
RGSC_v3.4	8	123,883,743 - 123,883,872	RGD	RGSC3.4
RGSC_v3.4	8	123,883,744 - 123,883,872	UniSTS	RGSC3.4
RGSC_v3.1	8	123,903,481 - 123,903,609	RGD
RH 3.4 Map	8	1292.2	UniSTS
RH 3.4 Map	8	1292.2	RGD
RH 2.0 Map	8	1003.0	RGD
Cytogenetic Map	8	q32	UniSTS

RH142543

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,767,104 - 118,767,211 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,726,115 - 127,726,221	NCBI	Rnor6.0
Rnor_5.0	8	126,943,266 - 126,943,372	UniSTS	Rnor5.0
RGSC_v3.4	8	123,993,440 - 123,993,546	UniSTS	RGSC3.4
Celera	8	117,940,691 - 117,940,797	UniSTS
RH 3.4 Map	8	1290.3	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH144327

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,708,480 - 118,708,601 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,668,347 - 127,668,467	NCBI	Rnor6.0
Rnor_5.0	8	126,885,498 - 126,885,618	UniSTS	Rnor5.0
RGSC_v3.4	8	123,934,046 - 123,934,166	UniSTS	RGSC3.4
Celera	8	117,882,227 - 117,882,347	UniSTS
RH 3.4 Map	8	1290.2	UniSTS
Cytogenetic Map	8	q32	UniSTS

RH144577

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,765,209 - 118,765,417 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,724,220 - 127,724,427	NCBI	Rnor6.0
Rnor_5.0	8	126,941,371 - 126,941,578	UniSTS	Rnor5.0
RGSC_v3.4	8	123,991,545 - 123,991,752	UniSTS	RGSC3.4
Celera	8	117,938,796 - 117,939,003	UniSTS
RH 3.4 Map	8	1313.6	UniSTS
Cytogenetic Map	8	q32	UniSTS

BE097955

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,764,671 - 118,764,832 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,723,682 - 127,723,842	NCBI	Rnor6.0
Rnor_5.0	8	126,940,833 - 126,940,993	UniSTS	Rnor5.0
RGSC_v3.4	8	123,991,007 - 123,991,167	UniSTS	RGSC3.4
Celera	8	117,938,258 - 117,938,418	UniSTS
RH 3.4 Map	8	1288.3	UniSTS
Cytogenetic Map	8	q32	UniSTS

BE105202

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,754,535 - 118,754,699 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,713,688 - 127,713,851	NCBI	Rnor6.0
Rnor_5.0	8	126,930,839 - 126,931,002	UniSTS	Rnor5.0
RGSC_v3.4	8	123,980,866 - 123,981,029	UniSTS	RGSC3.4
Celera	8	117,928,117 - 117,928,280	UniSTS
RH 3.4 Map	8	1311.5	UniSTS
Cytogenetic Map	8	q32	UniSTS

AW533609

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,756,827 - 118,756,999 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,715,980 - 127,716,151	NCBI	Rnor6.0
Rnor_5.0	8	126,933,131 - 126,933,302	UniSTS	Rnor5.0
RGSC_v3.4	8	123,983,159 - 123,983,330	UniSTS	RGSC3.4
Celera	8	117,930,409 - 117,930,580	UniSTS
RH 3.4 Map	8	1288.9	UniSTS
Cytogenetic Map	8	q32	UniSTS

BE114426

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,646,082 - 118,646,242 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,606,310 - 127,606,469	NCBI	Rnor6.0
Rnor_5.0	8	126,824,690 - 126,824,849	UniSTS	Rnor5.0
RGSC_v3.4	8	123,873,146 - 123,873,305	UniSTS	RGSC3.4
Celera	8	117,821,391 - 117,821,550	UniSTS
RH 3.4 Map	8	1292.1	UniSTS
Cytogenetic Map	8	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	91	59	6	355	191	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001395740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000075793 ⟹ ENSRNOP00000064414

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	127,520,499 - 127,644,999 (+)	Ensembl
mRatBN7.2 Ensembl	8	118,642,672 - 118,767,117 (+)	Ensembl
Rnor_6.0 Ensembl	8	127,702,534 - 127,726,127 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112881 ⟹ ENSRNOP00000085754

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	127,572,634 - 127,644,999 (+)	Ensembl
mRatBN7.2 Ensembl	8	118,642,672 - 118,767,117 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000144382 ⟹ ENSRNOP00000111038

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	127,520,789 - 127,641,787 (+)	Ensembl

RefSeq Acc Id:

NM_001106865 ⟹ NP_001100335

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	127,611,998 - 127,644,878 (+)	NCBI
mRatBN7.2	8	118,734,239 - 118,767,117 (+)	NCBI
Dahl_SR_JrHsd	8	128,474,200 - 128,507,121 (+)	NCBI
Lyon_Normotensive	8	130,576,590 - 130,609,511 (+)	NCBI
Lyon_Hypertensive	8	129,062,526 - 129,095,447 (+)	NCBI
F344_StmMcwi	8	120,470,004 - 120,502,926 (+)	NCBI
Rnor_6.0	8	127,065,292 - 127,726,127 (+)	NCBI
Rnor_5.0	8	126,919,687 - 126,943,278 (+)	NCBI
RGSC_v3.4	8	123,960,578 - 123,993,452 (+)	RGD
Celera	8	117,907,827 - 117,940,703 (+)	RGD

Sequence:

show sequence

CGCAGCTTCCCAGCGCAACATCAGCCTAAAGAAGCAGAGGGGTCGGAGTATCCTTAGCTCTTTC
TTCTGCTGCTTCCGAGACTACAATGTGGAACCCCCTCCACCCAGCAGCCCCAGTGTGCTTCCGC
CACTGGTGGAGGAGAACGGTGGGCTTCAGAAGGGTGACCAGAGGCAGGTCATTCCCGTACCAAG
TCCGCCAGCCAAATACCTCCTTCCAGAGGTGACGGTGCTCGACCATGGAAAGAAATGTGTGGTC
ATTGATCTAGACGAAACCTTGGTGCACAGTTCGTTTAAGCCCATTAGTAATGCTGACTTCATTG
TTCCGGTTGAAATCGACGGAACCATACACCAGGTGTACGTGCTGAAGCGGCCGCACGTGGACGA
GTTCCTCCAGAGGATGGGGCAGCTCTTTGAGTGTGTGCTCTTCACTGCCAGCTTGGCCAAGTAC
GCAGACCCTGTAGCTGACCTCCTGGACCGGTGGGGCGTGTTCCGGGCCCGACTCTTCAGAGAAT
CCTGTGTTTTCCATCGAGGGAACTACGTGAAGGACCTGAGTCGCCTGGGACGGGAGCTGAGCAA
AGTGATCATCGTGGACAATTCTCCTGCCTCCTACATCTTCCATCCTGAGAACGCAGTGCCTGTG
CAGTCCTGGTTCGATGACATGACAGACACGGAGCTGTTGGACCTCATCCCGTTCTTCGAGGGCC
TAAGCAGGGAAGACGATGTCTACAGAATGCTCCACAGACTCTGTAGCAGGTAGCCCTGGCCTTG
GCCCGTCTGTGCCTGTGCACTCACTCTGGAACCCCTGGCTCAGGGGACCCGCCCGGCCTCCGCT
CCCCGAGTGGAGCCTGGGAAGACTCCACGCTTTGGGCCACAAGGTGAATGTCTCCATGCCTACC
TGGTTTGTTTGTTTTTTTGTTTTGTTTTTTTTTTTTAAAGAACAGAAACAACTATTTTAAAGAA
AAAAACAAAACTTTTAATAGATTTCATAAGCGGACGTGCATTTTACCAGATTCGATTTTCTTAA
AACATACCAAAAAGAAAAAAAGAAAAAGAAGAAGAAAAAAAAAAAAACCCAAGACTTTGATATC
CTTTCAACTGACCTCCCCTTCCCAGCAGACAACCTGTCCTCCTCTTCGTCCCGGTTTGGAGCAG
CTGACCCAACTCAGAATCTCTTTCCTACAAGATGAAGTGCCTTTTTTGAATGTTATTTTAAGCT
GAAAGTTAATTTTTGTATACAGCCTATTTCCAAACATCTTTTAGTCTTTTACAGTCTTAGATAC
TTACTCTGAGAAGACGAAACAGGACCATTTTATAGAACCTGGTAGCTGTGTGGGGGTGGGTGGG
GAGGGTGTGGTCAGGGAAAGCAGTGGGTCACAGGAGCCTGCCTCCCAACATGTCTGACTGTCCA
CTGTGGCACGCATGGGCTCTGGCTCCCACTGACAGGAGCTTCCTCCTGACTGTCACTGTCTGCA
CTCGTTTCTGACCAGTCTGGAATGTGCCTGCCAATGGCCTGATGCTTTAGGAAACAGCCGGTTC
CTCTCGTGATGGTTTCTGAGGTTGTTAAAATACATCTTGAGGTTGCCGGGTTTTTTTTTTTTTG
TTTTTTTGTTGTTTTTTCTTGCCCTTGGGAAGTGACATCGTGTCGTCACGTGTGCTTTTCCCCA
CGACTCCACGCGTCTGTCCCTTGCTGTTCTGTTGTCACTGGTGTGAGGAGAACAGTTAGAAAAA
ACCCTAAAGCCCTTGGGTCGTGAAGCTCTTCCTTTCTAAAGCTGGGGTACACGTGGGGCTAGCT
GCTACTGCACTCCTGCCACCAAATGGAAATGACCAGCGGCTGTTACACTGTTCCTTAGCCACTG
TGCCTATGCTTAGAAGACGCTCGCCGCTAAGCTGCAGACTCGGACAGGGTCAGAAACAGGTGTC
CCAACCCATCAAGCATGGCATCGTTCTTTGGACCCAGCCAGTGCCAAGAATGCTGAAGGGCACG
ACGGTTTAAAAAAAAAAAAAACAAAAAAACAACTGAAGGGCCAAAGCACTGCTCGGATGTGGCG
TTCACTGCAGTCAACATCAGAGCCTGAGGTAGAACTCTCGGGTCTTGCTTGAGAACCTGTGGCC
TCAGCCGGCCTCCTTGCTGGTGTGGCTGGCTCAAGTCTGCCACTCAGCCTCTTTGGAAGCACAC
CCTCTTCGAGCCAAGGGTTAGAGAAGCCTGCCGGGATGGGAGACTCATCCCTCCAAACCAGGGA
GACCGGCTTCTCCCTGGAGCCTGGGGCTCTCCTCCCAACTGTTCCCAGTTCGGTGTTTAATGGT
GCCATGTTTCGTCGCTTAAAGAACCCTTTTTGTGTTGGCACCGACGCCTTAGTCCTCCATGGGT
TGGGCCTCCCTCAGCAGAACTCTGCTGGGAGTCGCTGGCATTGACAAGATTTGAAGTCAGGGGT
CAAACTTAAAAAAAATGTTTTTTCTTTCATTCACAAAACAATGAAGCCAGCTACTGGGCCTGTC
TTCCCTCAGTGCTTGGTCTGGGGAACCACTGTGCAATCCGAACAGGAATATATGTAGGGGTCAT
TCAGATCGCCTGACTGAGTGTTCTGAACCCTAAGTAAGCCCTGTGCCAATTAAAATAGAAACCG
CCCCCTTGCTCAACACTCCCACAGGTAACAGCAGTTACACAGCAGATCCCCACACACCATAAAC
CCCCGTGGAAAACCAGTCGTTAACCAATCCCACTGCCTTAAGTGTCCTGGGTGTTTCAGTGTCT
GCTGTGTGTTGAGTTCCACACAGAACGAGGCCTGGACGGAACCTCAGATCTTTGCCTGAGCCTC
TTTGTGTCGGTGTCACGGGGCCTTATTTAAAAGGGGCGGGGTGGGGGCAGAATGGACTAAACTT
CCAGAATATTTCAGGGGAACCGAGCCTAGAAGTAGTGCTCTACTTCAGGCAGGTTCGAGGCTAA
CCCTTGGCCTTACAGCTCCGGGGCTGTGTGTCCTCATGCACTCCTGGCAGAGCTTACCGGTAGG
GAGCCCTGTTCTTGCCACCACAAACTTGGAATGTCTTGGGCGGGTGGCAGAGCTTCTGAGGGTT
CTGAAATCTGCACCTTATTTGACCAAGCTCCAAAATGCCAATTTTTTCCTTTTTTTTTAATTAA
AAAAAAATTCCGCTTTATGTACATAATTGAAAAAAATCTATATTTTTAATCAGTTACATGTAAA
TGAAGCAATAGAACTCTAACAAGGCCGAGAAAGGAGACGAATGTTTTGAGGTTTATTTTCTTAA
GGTAAATACGGGTATTGCTTTTAATTGTCAGTTTATTAAAATGTGGGCTTGAAAACATCATCAG
CCACTTCTCTGTGCCATATCCTTCCCACGTTACCAAAACACTCCCATCTCCTTAGCCAAAAGAA
ACATCTCACCTCCCAAGTCCCTCGGTCCTTTCAGCCCCAGGTTAGGACCCCTCTCTTAGATGAG
TACCTTCGATGTAAAGGTCTGGGACAGCGTGGCTTGGGTGGGTGGACTCCAGCCTACACCATTT
GCTTGACCTCAAGTGGGGGGCTTCCTGGGCACCCCGACCCCTAATGACGTTAATGTTCTTGTCT
TCCGTTTGTTCTGGAGTCCTCCATGTTGGTCTGTGGTCTCCTGCACTCGCTGTTCGTAAACGAT
ACATTGTATCTTCATCTCCCCACCTGTCAGCAGATGGTGGTGAATCCTTTGACTGGGGGTGCGA
TGCCGTGAGGTGACTTTGGGGGCATGAGGACTAGGTCGCCAGGGTCACAGCATTTGAAGCTGGG
GTACGAGACCTATAAGTGTGTAGAGCCTGGCAGCCTTTTACAGCCCTGTGTTTCAGAGATGGCT
TCCTAATAAAATCCAGAAACACACAGCCCTATTAGTCAGACACTCGTGACGTTTGTGCCTCTGC
TTCTAACGGTGCTGTGCTGGGCAGCCGGCCCGCCAGGGTTTGAGGAGACGGACGGATGGCTTAC
CGCGCTCGTGGTTCCCTGTGCAAAATTGCTGGCTGCCTCTGTTCCTATTTTACTGTAAATCTGA
CCATGCCTATCCCGGGAGTCGCCCTGAGGATAGGTAGCCCCCAGCAGTGGTGACGTGGGTGCCT
GGGGAGTTACAGTTTTCTGCTGGACGT

hide sequence

RefSeq Acc Id:

NM_001395740 ⟹ NP_001382669

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	127,520,499 - 127,644,999 (+)	NCBI
mRatBN7.2	8	118,642,731 - 118,767,238 (+)	NCBI
Dahl_SR_JrHsd	8	128,382,709 - 128,507,242 (+)	NCBI
Lyon_Normotensive	8	130,485,095 - 130,609,632 (+)	NCBI
Lyon_Hypertensive	8	128,971,032 - 129,095,568 (+)	NCBI
F344_StmMcwi	8	120,378,506 - 120,503,047 (+)	NCBI

RefSeq Acc Id:

XM_039081298 ⟹ XP_038937226

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	127,520,478 - 127,644,999 (+)	NCBI
mRatBN7.2	8	118,642,729 - 118,767,238 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100335	(Get FASTA)	NCBI Sequence Viewer
	NP_001382669	(Get FASTA)	NCBI Sequence Viewer
	XP_038937226	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76931	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000064414
	ENSRNOP00000064414.2
	ENSRNOP00000085754.2
	ENSRNOP00000111038
	ENSRNOP00000111038.1

RefSeq Acc Id:	NP_001100335 ⟸ NM_001106865
- Peptide Label:	isoform 2
- UniProtKB:	A6I3U6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIV DNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYRMLHRLCSR hide sequence

Ensembl Acc Id:

ENSRNOP00000064414 ⟸ ENSRNOT00000075793

RefSeq Acc Id:	XP_038937226 ⟸ XM_039081298
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GE87 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000085754 ⟸ ENSRNOT00000112881

RefSeq Acc Id:	NP_001382669 ⟸ NM_001395740
- Peptide Label:	isoform 1
- UniProtKB:	M0R4W4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000111038 ⟸ ENSRNOT00000144382

Protein Domains

FCP1 homology

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R4W4-F1-model_v2	AlphaFold	M0R4W4	1-119	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304841	AgrOrtholog
BioCyc Gene	G2FUF-28814	BioCyc
Ensembl Genes	ENSRNOG00000046257	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075793	ENTREZGENE
	ENSRNOT00000075793.4	UniProtKB/TrEMBL
	ENSRNOT00000112881.2	UniProtKB/TrEMBL
	ENSRNOT00000144382	ENTREZGENE
	ENSRNOT00000144382.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1000	UniProtKB/TrEMBL
InterPro	Dullard_phosphatase	UniProtKB/TrEMBL
	HAD-like_dom	UniProtKB/TrEMBL
	HAD-like_sf	UniProtKB/TrEMBL
	NIF	UniProtKB/TrEMBL
	RNA_Pol_CTD_Phosphatase	UniProtKB/TrEMBL
	TIM50	UniProtKB/TrEMBL
KEGG Report	rno:301056	UniProtKB/TrEMBL
NCBI Gene	301056	ENTREZGENE
PANTHER	DULLARD PROTEIN PHOSPHATASE	UniProtKB/TrEMBL
Pfam	NIF	UniProtKB/TrEMBL
PhenoGen	Ctdspl	PhenoGen
PROSITE	FCP1	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000046257	RatGTEx
SMART	CPDc	UniProtKB/TrEMBL
Superfamily-SCOP	HAD-like_dom	UniProtKB/TrEMBL
UniProt	A0A8I6GE87	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M656_RAT	UniProtKB/TrEMBL
	A6I3U6	ENTREZGENE, UniProtKB/TrEMBL
	M0R4W4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-12	Ctdspl	CTD small phosphatase like	Ctdspl	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Ctdspl	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	Ctdspl_predicted	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Ctdspl_predicted	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Annotations - PID (archival)