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Gene: Sptb (spectrin, beta, erythrocytic) Rattus norvegicus

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Symbol:

Sptb

Name:

spectrin, beta, erythrocytic

RGD ID:

1303243

Description:

Predicted to enable actin filament binding activity and ankyrin binding activity. Predicted to be involved in actin cytoskeleton organization and modification of postsynaptic actin cytoskeleton. Predicted to act upstream of or within hemopoiesis; plasma membrane organization; and porphyrin-containing compound biosynthetic process. Is active in glutamatergic synapse and postsynapse. Human ortholog(s) of this gene implicated in hereditary spherocytosis and hereditary spherocytosis type 2. Orthologous to human SPTB (spectrin beta, erythrocytic); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

erythroid spectrin beta; hypothetical protein LOC679700; LOC314251; LOC679700; spectrin beta 1; spectrin beta chain, erythrocyte; spectrin beta chain, erythrocytic; Spnb1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SPTB (spectrin beta, erythrocytic)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Sptb (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sptb (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SPTB (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SPTB (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sptb (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SPTB (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SPTB (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sptb (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Sptb (spectrin beta, erythrocytic)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	KCNJ14 (potassium inwardly rectifying channel subfamily J member 14)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SPTB (spectrin beta, erythrocytic)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Sptb (spectrin beta, erythrocytic)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	sptb (spectrin, beta, erythrocytic)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	unc-70	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	beta-Spec	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	sptb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	101,043,512 - 101,170,389 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	101,045,216 - 101,170,278 (-)	Ensembl				GRCr8
mRatBN7.2	6	95,310,342 - 95,437,221 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	95,310,326 - 95,437,118 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	95,718,916 - 95,828,078 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	96,017,424 - 96,126,588 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	95,446,242 - 95,555,412 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	99,657,144 - 99,783,189 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	99,659,651 - 99,783,047 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	109,055,163 - 109,181,316 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	99,194,202 - 99,315,691 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	93,748,706 - 93,857,362 (-)	NCBI		Celera
RGSC_v3.1	6	99,197,658 - 99,319,147 (-)	NCBI
Cytogenetic Map	6	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

anemia (ISO)

Chudley-Mccullough syndrome (ISO)

congenital hemolytic anemia (ISO)

Elliptocytosis 3 (ISO)

genetic disease (ISO)

hemolytic anemia (ISO)

hereditary elliptocytosis (ISO)

hereditary pyropoikilocytosis (ISO)

hereditary spherocytosis (ISO)

hereditary spherocytosis type 2 (ISO)

neonatal anemia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-butoxyethanol (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cannabidiol (ISO)

cantharidin (ISO)

CGP 52608 (ISO)

copper(II) sulfate (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dichloroacetic acid (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

ethylparaben (ISO)

fulvestrant (ISO)

genistein (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

ivermectin (ISO)

lead(0) (ISO)

methoxychlor (EXP)

Moniliformin (ISO)

N,N-diethyl-m-toluamide (EXP)

N-methyl-4-phenylpyridinium (EXP)

O-methyleugenol (ISO)

okadaic acid (ISO)

paracetamol (EXP)

permethrin (EXP)

potassium dichromate (ISO)

rifampicin (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sotorasib (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (EXP,ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trametinib (ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

Triptolide (EXP)

valproic acid (EXP,ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IBA)

actin filament capping (IEA)

biological_process (ND)

cytoskeleton organization (IEA)

hemopoiesis (ISO)

modification of postsynaptic actin cytoskeleton (IEA,ISO)

plasma membrane organization (ISO)

porphyrin-containing compound biosynthetic process (ISO)

Cellular Component

cell cortex (IEA)

cell junction (IBA)

cell projection (IBA)

cell surface (ISO)

cortical actin cytoskeleton (IBA)

cortical cytoskeleton (IEA,ISO)

cytoplasm (IEA)

cytoskeleton (IEA)

glutamatergic synapse (IDA,IEA,ISO)

membrane (IEA,ISO)

plasma membrane (IBA,IEA,ISO)

postsynapse (IDA)

protein-containing complex (IEA,ISO)

spectrin (IEA)

spectrin-associated cytoskeleton (IEA,ISO)

Molecular Function

actin binding (IEA,ISO)

actin filament binding (IBA,IEA,ISO)

ankyrin binding (IEA,ISO)

phospholipid binding (IEA)

protein binding (ISO)

structural constituent of cytoskeleton (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Spectrin Rouen (beta 220-218), a novel shortened beta-chain variant in a kindred with hereditary elliptocytosis. Characterization of the molecular defect as exon skipping due to a splice site mutation.	Garbarz M, etal., J Clin Invest. 1991 Jul;88(1):76-81.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Novel beta-spectrin mutations in hereditary spherocytosis associated with decreased levels of mRNA.	Maciag M, etal., Br J Haematol. 2009 Aug;146(3):326-32. doi: 10.1111/j.1365-2141.2009.07759.x. Epub 2009 Jun 15.
4.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation
9.	Spectrins in developing rat hippocampal cells.	Ursitti JA, etal., Brain Res Dev Brain Res. 2001 Jul 23;129(1):81-93. doi: 10.1016/s0165-3806(01)00160-2.

Additional References at PubMed

PMID:379653	PMID:658175	PMID:6234993	PMID:8159688	PMID:9373263	PMID:9373273	PMID:10867799	PMID:14627610	PMID:16060676	PMID:18723693	PMID:20585040	PMID:21297961
PMID:26514267	PMID:31505169

Genomics

Comparative Map Data

Sptb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	101,043,512 - 101,170,389 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	101,045,216 - 101,170,278 (-)	Ensembl				GRCr8
mRatBN7.2	6	95,310,342 - 95,437,221 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	95,310,326 - 95,437,118 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	95,718,916 - 95,828,078 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	96,017,424 - 96,126,588 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	95,446,242 - 95,555,412 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	99,657,144 - 99,783,189 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	99,659,651 - 99,783,047 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	109,055,163 - 109,181,316 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	99,194,202 - 99,315,691 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	93,748,706 - 93,857,362 (-)	NCBI		Celera
RGSC_v3.1	6	99,197,658 - 99,319,147 (-)	NCBI
Cytogenetic Map	6	q24	NCBI

SPTB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	64,746,283 - 64,879,907 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	64,746,283 - 64,879,907 (-)	Ensembl			hg38	GRCh38
GRCh37	14	65,213,001 - 65,346,625 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	64,282,754 - 64,359,619 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	64,302,870 - 64,416,308	NCBI
Celera	14	45,270,736 - 45,347,605 (-)	NCBI		Celera
Cytogenetic Map	14	q23.3	NCBI
HuRef	14	45,384,969 - 45,462,806 (-)	NCBI		HuRef
CHM1_1	14	65,152,596 - 65,229,440 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	58,954,121 - 59,087,910 (-)	NCBI		T2T-CHM13v2.0

Sptb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	76,627,262 - 76,757,321 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	76,627,262 - 76,757,321 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	76,580,488 - 76,710,547 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	76,580,488 - 76,710,547 (-)	Ensembl			mm10	GRCm38
MGSCv37	12	77,681,475 - 77,811,534 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	77,499,328 - 77,629,387 (-)	NCBI		MGSCv36	mm8
Celera	12	77,672,725 - 77,802,629 (-)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	33.73	NCBI

Sptb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	5,097,116 - 5,167,596 (+)	Ensembl
ChiLan1.0	NW_004955466	5,013,963 - 5,170,186 (+)	NCBI	ChiLan1.0	ChiLan1.0

SPTB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	65,860,082 - 65,997,182 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	65,076,595 - 65,213,602 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	45,329,658 - 45,466,597 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	64,209,453 - 64,289,073 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	64,209,453 - 64,288,851 (-)	Ensembl			panPan2	panpan1.1

SPTB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	39,156,388 - 39,300,908 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	39,158,795 - 39,221,193 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	38,861,964 - 38,913,675 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	39,377,314 - 39,523,986 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	39,379,542 - 39,500,041 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	39,013,953 - 39,065,557 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	39,086,903 - 39,138,647 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	39,445,769 - 39,497,441 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Sptb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	65,651,095 - 65,775,749 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	8,415,912 - 8,486,039 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	8,415,950 - 8,540,590 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPTB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	88,812,718 - 88,954,306 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	88,812,717 - 88,954,471 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	95,193,318 - 95,335,373 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPTB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	41,957,438 - 42,038,522 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	41,978,595 - 42,038,516 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	30,129,480 - 30,266,419 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sptb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	36,202,011 - 36,270,942 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	36,151,701 - 36,272,058 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Sptb
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	90,736,079 - 90,862,738 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Sptb
387 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	185
Count of miRNA genes:	129
Interacting mature miRNAs:	142
Transcripts:	ENSRNOT00000009028
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
12801411	Schws8	Schwannoma susceptibility QTL 8			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	100704576	101593851	Rat
70176	Mcsm1	Mammary carcinoma susceptibility modifier QTL 1			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	64367996	109367996	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	98944780	143944780	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	100704576	136029228	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2293837	Kiddil1	Kidney dilation QTL 1	3.7		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
2293842	Kiddil3	Kidney dilation QTL 3	4.3		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
1576302	Schws4	Schwannoma susceptibility QTL 4		0.0078	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	78204640	123204640	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
1300075	Glom7	Glomerulus QTL 7	5.6	0.0000002	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	6	76937178	121937178	Rat
1331789	Rf37	Renal function QTL 37	3.224		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	86494122	112380234	Rat
1331725	Bp212	Blood pressure QTL 212	3.52475		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	99437079	125323237	Rat
1331722	Thshl1	Thyroid stimulating hormone level QTL 1	11.7	0.0001	blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	6	99708426	112483760	Rat

Markers in Region

D6Got123

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	101,143,824 - 101,143,994 (+)	Marker Load Pipeline
mRatBN7.2	6	95,410,661 - 95,410,831 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	99,757,445 - 99,757,614	NCBI	Rnor6.0
Rnor_5.0	6	109,155,582 - 109,155,751	UniSTS	Rnor5.0
RGSC_v3.4	6	99,289,184 - 99,289,354	RGD	RGSC3.4
RGSC_v3.4	6	99,289,185 - 99,289,354	UniSTS	RGSC3.4
Celera	6	93,830,892 - 93,831,051	UniSTS
RGSC_v3.1	6	99,292,641 - 99,292,810	RGD
RH 3.4 Map	6	676.1	UniSTS
RH 3.4 Map	6	676.1	RGD
Cytogenetic Map	6	q24	UniSTS

D6Got206

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	95,345,362 - 95,345,530 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	99,692,158 - 99,692,325	NCBI	Rnor6.0
Rnor_5.0	6	109,090,178 - 109,090,345	UniSTS	Rnor5.0
RGSC_v3.4	6	99,211,276 - 99,211,444	RGD	RGSC3.4
RGSC_v3.4	6	99,211,277 - 99,211,444	UniSTS	RGSC3.4
Celera	6	93,765,781 - 93,765,931	UniSTS
RGSC_v3.1	6	99,214,733 - 99,214,900	RGD
RH 3.4 Map	6	669.8	RGD
RH 3.4 Map	6	669.8	UniSTS
Cytogenetic Map	6	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	92	59	6	356	192	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001433972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_212522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY238343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009028 ⟹ ENSRNOP00000009028

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	101,051,189 - 101,170,278 (-)	Ensembl
mRatBN7.2 Ensembl	6	95,324,805 - 95,437,118 (-)	Ensembl
Rnor_6.0 Ensembl	6	99,659,651 - 99,783,047 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094264 ⟹ ENSRNOP00000097655

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	101,045,216 - 101,170,278 (-)	Ensembl
mRatBN7.2 Ensembl	6	95,310,326 - 95,437,118 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112302 ⟹ ENSRNOP00000082576

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	101,045,216 - 101,170,278 (-)	Ensembl
mRatBN7.2 Ensembl	6	95,310,326 - 95,437,118 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000162320 ⟹ ENSRNOP00000100926

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	101,051,788 - 101,170,278 (-)	Ensembl

RefSeq Acc Id:

NM_212522 ⟹ NP_997687

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	101,061,455 - 101,170,278 (-)	NCBI
mRatBN7.2	6	95,328,287 - 95,437,118 (-)	NCBI
Rnor_6.0	6	99,675,083 - 99,783,069 (-)	NCBI
Rnor_5.0	6	109,055,163 - 109,181,316 (-)	NCBI
RGSC_v3.4	6	99,194,202 - 99,315,691 (-)	RGD
Celera	6	93,748,706 - 93,857,362 (-)	RGD

Sequence:

show sequence

GCGGCCGCTGTGCCAGGAGCCCCGTGCTGCCCTCCTCCCCCTGCGCCGCCGCCCCCGGGCTCGG
GGTGGCCGCCGCTTCAGCCCCAGCGCAGGGACTCTTCCATGAAGACTGAGCCAGGCATAGCTGC
TAAGAAGAGCCTGCTGACATGACATCAGCCACGGAGTTTGAAAACGTGGGCAACCAGCCACCAT
ACAGCCGGATTAATGCCCGCTGGGACGCCCCAGATGATGAACTGGACAACGATAGCAGCTCAGC
CAGGCTCTTTGAGAGGTCCCGGATCAAGGCCTTGGCAGATGAGCGGGAAGTGGTTCAGAAGAAA
ACCTTTACGAAATGGGTGAACTCCCACCTGGCTCGAGTGTCCTGCCGCATCAGCGATCTCTACA
AGGACCTGCGGGATGGACGCATGCTCATCAAGCTGCTGGAGGTGCTCTCCGGAGAGATGCTGCC
AAGGCCGACCAAGGGCAAGATGCGCATCCACTGCCTGGAGAACGTGGACAAAGCCCTGCAGTTC
CTCAAGGAGCAGCGCGTGCACCTGGAAAACATGGGCTCCCACGACATCGTGGATGGCAACCACC
GCCTGGTCCTGGGCCTCATCTGGACGATTATCCTCCGATTCCAGATTCAAGACATTGTTGTCCA
AACTCAAGAAGGTCGGGAGACACGCTCAGCCAAGGATGCTCTGCTTCTGTGGTGCCAGATGAAG
ACAGCCGGCTACCCCCAAGTCAACGTAACCAACTTCACCTCCAGCTGGAAGGACGGCCTGGCCT
TCAATGCCCTAATTCATAAACACCGGCCTGACCTCATTGACTTTGACAAGCTAAAGGACTCCAA
TGCCCGGCATAACTTGGAGCACGCATTTGATGTGGCCGAGCGTCAGCTGGGCATCATCCCACTC
CTTGACCCCGAAGATGTCTTCACAGAAAACCCAGACGAGAAGTCCATCATCACCTACGTGGTAG
CATTTTACCACTACTTCTCCAAGATGAAGGTGCTAGCGGTGGAGGGCAAGAGAGTCGGCAAGGT
CATTGACCATGCCATTGAGACTGAGAAGATGATTGAAAAGTACAGTGGGCTAGCCTCAGACCTG
CTCACCTGGATTGAGCAAACCATTAGCGTCCTGAACAGCCGCAAGTTTGCCAACTCATTGAGTG
GCGTCCAGCAGCAGCTACAGGCCTTCAGCACCTACCGCACTGTGGAGAAGCCACCCAAGTTTCA
AGAGAAGGGGAATCTGGAAGTCCTCCTGTTCACTATCCAATCCCGAATGAGAGCCAACAATCAG
AAAGTGTACACGCCCCACGATGGGAAGCTAGTGTCTGACATCAACAGGGCCTGGGAGAGCCTAG
AGGAAGCAGAATACCAAAGGGAGCTGGCCCTGAGGAGCGAGCTCATTCGGCAGGAGAAACTGGA
GCAGCTGGCGCGGCGCTTCGACCGTAAGGCAGCCATGAGAGAGACGTGGCTCAACGAAAACCAG
CGCCTGGTGACCCAGGATAACTTCGGGTATGACCTGGCAGCTGTGGAGGCCGCCAAGAAGAAGC
ACGAAGCCATTGAGACCGACACGGCTGCCTATGAGGAGCGGGTGAAGGCACTGGAGGACCTGGC
CCAGGAGCTGGAGAAGGAGAATTACCATGACCAGAAGCGCATCAGTGCCAGGAAGAACAATATC
CTCCGTCTGTGGAGCTACCTGCAGGAGCTGCTGCGATCCCGGCGACAGCGGCTCGAGGCCACCC
TGGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAGTATCGACTGGATGGATGAGATCAAGGC
GCACATCTTGTCTGCTGAATTTGGGAAGCACTTGTTAGAGGTTGAAGACCTGCTACAGAAACAC
AAGCTAATGGAAGCCGACATTGCTATCCAAGGGGACAAAGTGAAGACCATCACCGCGGCCACCC
TGCAGTTCACTGAGGGGAAAGGGTATCAGCCTTGTGACCCCCAGGTCATCCAGGACCGTGTCAG
CCACCTAGAGCAATGCTTCAGTGAACTGAGCAACATGGCAGCTGGACGGAAGGCTCAGCTGGAG
CAGTCTAAGCGACTCTGGAAGTTCTTCTGGGAGATGGACGAGGCCGAAAGCTGGATCAAGGAAA
AGGAACAGATCTACTCCTCCCTGGACTACGGCAAGGACCTGACGAGTGTGCTCATCTTACAGCG
CAAGCACAAGGCCTTCGAGGACGAGCTCCGTGGGCTCGATGCCCATCTGAAGCAGATCTTCCAG
GAGGCTGAGGACATGGTTGCACAAAAGCAGTTTGGACATCCACAGATCGAGACCCGTGTCAAAG
AAGTATCGGCTCAGTGGGACCACTTGAAAGAGCTGGCTGCCTTTCGTAAGAAAGACCTGCAGGA
TGCGGAAAACTTCTTCCAGTTCCAGGGTGATGCAGACGACCTGAAGGCTTGGCTGCAAGACGCT
CACCGGCTGCTTTCCGGTGAAGATGTGGGGCAAGACGAAGGAGCCACGAGGGCCCTGGGAAAGA
AGCACAAGGAGTTTCTAGAGGAGCTGGAGGAGAGCCGCGGGGTGATGGAGCACTTAGAGAACCA
AGCCCAGGGCTTCCCCGAGGAGTTTCGAGATTCCCCAGATGTGACAAACCGTCTACAGGCACTC
AGGAAGCTCTACCAGCAGGTGATGGCCCAGGCAGAATTGCGTGGACACAAGCTGCAGGAAGCCC
TGGACTTGTACACTGTGTTTGGAGAGTCAGACGCCTGTGAGCTGTGGATGACTGAGAAGGGGAA
GTGGCTGGACCAGATGGATATCCCAAACACGCTGGAGGATCTGGAGGTTGTGCAGCACAGGTTT
GACATCCTGGACCAGGAGATGAAGACCTTGATGGCGCAGATTGATGGCGTGAACCTTGCGGCCA
ACAACCTGGTAGAGAGCGGCCACCCACGCAGTGGGGAGGTGAAACAATATCAGGACCGCCTAAA
CAAGAGGTGGCAGGCCTTCCAGGCAGTGGTGTCAGAGCAGAGAGAGGCTGTGGACTCGGCTCTC
CGAGTAAACAATTACTGTGTAGACTGTGAGGAAACCAGCAAGTGGATCGTGGACAAGACGAAGG
TTGTGGAGTCTACCAAGGACTTGGGGCAGGACCTAGCAGGAGTCATTGCCATCCAGCGGAAGTT
GTCAGGGTTGGAGCGGGACGTATTGGCCATCCGGGATCGTGTGAGCGCCTTGGAACGGGAGTCG
CAGTACTTGATGGAGTCACACCCTGACCAGAAAGAGGACATTGGCCAGCGGCAAGCAGATGTCG
AGAAGATGTGGAAGGGCCTGCAAGATGCCTTGCAAGGTCAGGAGCTCTCCTTAGGTGAGGCCAG
CAAGCTGCAGGCTTTCCTACAAGACCTGGATGACTTCAAGGCCTGGCTGTCGATGGCCCAAAAG
GCAGTGGCCTCTGAGGACATGCCTGAGTCACTCCCAGAGGCTGAGCAACTCCTACAGCAGCATG
CAGCCATTAAAGAGGAGATTGATGCTCACAAAGACGATTACCACCGGGTCAAGGCCTCTGGGGA
AAAAGTGATCGAAGGTCAAACTGACCCAGATTACCAGCTTCTGGGCCAGCGACTGGAGGGTCTA
GATACTGACTGGGATGCTCTGTGGCGGATGTGGGAGAGCCGAGGGAACACCCTCACCCAGTGCC
TGGGCTTCCAGGAGTTCCAGAAAGATGCCAAGCAGGCTGAAGCCATCCTCAGCAACCAGGAATA
CACTCTGGCTCACCTGGAGCCCCCAGACTCCCTAGCAGCTGCAGAGGCCGGCATCCGAAAGTTT
GAGGATTTCTTAGTGTCTATGGAAAACAACCGAGATAAAGTCCTGAGTCCTGTGGACTCCGGAA
ACATGCTGGTGTCTGAGGGCAACCTGTACTCGAACAAGATCAAAGAGAAGGTGCAGCTGATTGA
AGACAGGCACATGAAGAACAATGAGAAAGCCCAGGAGGTTACAGCTCTACTGAAAGACAACCTG
GAGTTGCAGAACTTCCTCCAGAACTGCAAGGAGCTCACTCTCTGGATCAATGACAAGCTGCTGA
CGTCTCCAGACATCTCCTATGACGAAGCCCGCAACCTTCACAACAAATGGATGAAACACCAGGC
ATTTATGGCAGAGCTGGCTTCACACCAAGGGTGGCTTGAGAACATCGTCGCGGAGGGAAGGCAG
CTGATGGCAGAGAAGCCCCAGTTCACGGATGTGGTGTCAGAAAGGCTGGAAGCCCTGCACAAGC
TCTGGGATGAGCTGCAGACCACCACAAAGGCGAAGACGGAGCAACTCTCTGCTGCCCGGAGCTC
TGACCTGCGCTTGCAAACCCACGCCGACCTTAGCAAATGGATCAGCGCCATGGAGGACCAGCTG
CGATCCGACGACCTGGGCAAGGATCTGACCACTGTCAACCGGATGTTGGTTAAGTTGAAGCGAG
TGGAGGAACAAGTGAATTTGCGGAAGGAGGAGCTGGAGGAACTCTTTGCAGAGGCACCCCCACT
GGGAGCAGAGGCAGGAGACACGGACATGAGCATTGAAAAGCGGTTCCTAGACCTTCTAGAACCT
CTGGGGAGGAGGAAGAAGCAGCTGGAATTATCCAAAGCCAAGCTACAGATCAGCCGGGACTTAG
AGGATGAGACGCTCTGGGTGGAAGAGAGGCTGCCGTTGGCGCAGTCAGCTGACTATGGCACTAA
TCTGCAAACAGTGCAGCTGTTCATGAAGAAGAACCAGACCCTGCAGAATGAGATCCTAGGCCAC
GCACCACGGGTGGAGGATGTGCTACATCGAGGGCAGGAGCTGGTGAAGGCAGCCGAGATCGACT
GCCAAGACATCGAGGAGCGCTTGGGGCATCTGCAGAGCTCGTGGGACACGCTGCGGGAGGCGGC
AGCTGGCCGGCTGCAGCGCCTGCGGGAAGCTCACGAGGCACAGCAGTACTACCTGGATGCGGGC
GAGGCTGAAGCGTGGATCAGCGAGCAGGAGCTCTACGTGTTCTCTGACGAACCCCCTAAGGACG
AAGAGGGCGCCATCGTGATGCTCAAGCGGCACCTTCGGCAGCAGCGCACGGTGGAGGAATATGG
AAGGAATATCAAACAGCTGGCTGGCCGCGCCCAGAGCCTGCTGTCTGCAGGCCACCCGGAGGGG
GAGCAGATCATCAGACTTCAGGGGCAAGTGGATAAGCAGTATGCCGGGCTGAAGGACATGGCTG
AGGAACGGAGGCGGAAGCTAGAGAACATGTACCACCTGTTCCAGCTGAAGAGAGAGGCTGACGA
CTTGGAGCAGTGGATTACGGAGAAAGAGATGGTGGCCTCATCCCAAGAAATGGGGCAGGACTTT
GACCACGTGACTATGCTCCGTGACAAGTTCCGAGACTTTGCCCGGGAGACCGGGGCTATCGGGC
AGGAGCGAGTAGACAATGTGAATTCTATCATTGAGCGTCTCATCGATGCGGGCCACAGCGAGGC
AGCCACCATTGCAGAGTGGAAGGATGGGCTGAATGACATGTGGGCAGATCTGCTGGAGCTCATT
GACACCCGCATGCAGCTGCTGGCTGCCTCCTACGACCTGCACCGCTATTTCTACACGGGCACCG
AGATCCTGGGCCTCATAGATGAGAAGCACAGAGAGTTGCCAGAGGACGTGGGGCTGGACGCCAG
CACAGCTGAGTCCTTCCACCGGGTCCACACTGCCTTCGAGCGGGAGCTCCACCTCCTGGGTGTG
CAGGTGCAGCAGTTCCAGGACGTGGCCACCCGACTGCAGACAGCGTATGCTGGGGAGAAGGCAG
ATGCTATCCAGAGCAAGGAGCAGGAGGTGTCCGCGGCCTGGCAGGCCCTGCTGGACGCGTGTGC
TGGGCGCCGAGCTCAGCTGGTAGATACGGCAGACAAGTTCCGCTTCTTCAGCATGGTGCGTGAC
CTCCTCTCCTGGATGGAGAGCATCATCCGGCAGATCGAGACCCAGGAGAGACCCAGGGATGTCT
CCTCGGTGGAACTGCTCTTGAAGTATCACCAGGGCATCAAGGCAGAGATCAATACCAGGGCCAA
GAACTTCAGCACCTGCCTAGAACTTGGGGAGTCCCTGCTACAGAGGCAACACCAGGCTTCAGAC
GAGATCCGGGAGAAATTACAGCAAGTGATATCCAGGAGGCAGGAGATGAATGACAAGTGGGAAG
CCCGCTCTGACAGGCTCCACATGCTGCTGGAGGTGTGCCAGTTCTCGAGGGACGCTTCTGTGGC
CGAGGCATGGCTGATTGCCCAGGAGCCCTACCTGGCCAGCCGGGACTTTGGACATACGGTGGAC
AGCGTGGAAAAGCTCATCAAGAGGCATGAGGCTTTTGAGAAGTCCACAGCCAGCTGGGCAGAGC
GCTTTGCTGCCCTGGAGAAGCCCACCACGCTTGAGCTTAAGGAACGCCAGACTCCAGACAGACC
CACAGAGGAACCTGGGCCTCAAGAGGAGGAAGGCGAGACAGCTGGCGAGGCTCCCCAGGTCCAC
CATGCGGCCACGGAGAGAACATCCCCGGTCAGTTTTATGTCCCGCTTGTCTAGCTCCTGGGAGT
CACTGCTGCCAGAGCCTGCTCACCCCTTCTAGGATCAGCCAGGGCAGAAGGAAGGCGAGGACAG
AAGAGGGCAGGGCATGCTTCCTGGTCCCTACCCTCATCCTGCCCACAGGCCACTCTAGGAGCCT
CCTTCAGATTCATCTACTTTTCTACTTAGATTTTAATTCTTAAATAATTCCGCTCCTTCCAACC
CAGAAGCCAGCCCACCAACATGATTCTGCAAGTTTGGTTTTCTCTAGTTTAATAAATTTTATGG
GATAGATACAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006240244 ⟹ XP_006240306

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	101,043,512 - 101,170,389 (-)	NCBI
mRatBN7.2	6	95,313,049 - 95,437,221 (-)	NCBI
Rnor_6.0	6	99,657,144 - 99,783,189 (-)	NCBI
Rnor_5.0	6	109,055,163 - 109,181,316 (-)	NCBI

Sequence:

show sequence

CCCCGCCGCGGGACTATCTGGTCCCGGCAGCAGCGATGTCCCCCGGCAGGAATGTCCCTCCTCA
GATAATGTTATTTATATCTCTGGGCGGGTCCGTGGCTCCGCAGCACCAGGCGCCCGGCGGCCGC
TGTGCCAGGAGCCCCGTGCTGCCCTCCTCCCCCTGCGCCGCCGCCCCCGGGCTCGGGGTGGCCG
CCGCTTCAGCCCCAGCGCAGGGACTCTTCCATGAAGACTGAGCCAGGCATAGCTGCTAAGAAGA
GCCTGCTGACATGACATCAGCCACGGAGTTTGAAAACGTGGGCAACCAGCCACCATACAGCCGG
ATTAATGCCCGCTGGGACGCCCCAGATGATGAACTGGACAACGATAGCAGCTCAGCCAGGCTCT
TTGAGAGGTCCCGGATCAAGGCCTTGGCAGATGAGCGGGAAGTGGTTCAGAAGAAAACCTTTAC
GAAATGGGTGAACTCCCACCTGGCTCGAGTGTCCTGCCGCATCAGCGATCTCTACAAGGACCTG
CGGGATGGACGCATGCTCATCAAGCTGCTGGAGGTGCTCTCCGGAGAGATGCTGCCAAGGCCGA
CCAAGGGCAAGATGCGCATCCACTGCCTGGAGAACGTGGACAAAGCCCTGCAGTTCCTCAAGGA
GCAGCGCGTGCACCTGGAAAACATGGGCTCCCACGACATCGTGGATGGCAACCACCGCCTGGTC
CTGGGCCTCATCTGGACGATTATCCTCCGATTCCAGATTCAAGACATTGTTGTCCAAACTCAAG
AAGGTCGGGAGACACGCTCAGCCAAGGATGCTCTGCTTCTGTGGTGCCAGATGAAGACAGCCGG
CTACCCCCAAGTCAACGTAACCAACTTCACCTCCAGCTGGAAGGACGGCCTGGCCTTCAATGCC
CTAATTCATAAACACCGGCCTGACCTCATTGACTTTGACAAGCTAAAGGACTCCAATGCCCGGC
ATAACTTGGAGCACGCATTTGATGTGGCCGAGCGTCAGCTGGGCATCATCCCACTCCTTGACCC
CGAAGATGTCTTCACAGAAAACCCAGACGAGAAGTCCATCATCACCTACGTGGTAGCATTTTAC
CACTACTTCTCCAAGATGAAGGTGCTAGCGGTGGAGGGCAAGAGAGTCGGCAAGGTCATTGACC
ATGCCATTGAGACTGAGAAGATGATTGAAAAGTACAGTGGGCTAGCCTCAGACCTGCTCACCTG
GATTGAGCAAACCATTAGCGTCCTGAACAGCCGCAAGTTTGCCAACTCATTGAGTGGCGTCCAG
CAGCAGCTACAGGCCTTCAGCACCTACCGCACTGTGGAGAAGCCACCCAAGTTTCAAGAGAAGG
GGAATCTGGAAGTCCTCCTGTTCACTATCCAATCCCGAATGAGAGCCAACAATCAGAAAGTGTA
CACGCCCCACGATGGGAAGCTAGTGTCTGACATCAACAGGGCCTGGGAGAGCCTAGAGGAAGCA
GAATACCAAAGGGAGCTGGCCCTGAGGAGCGAGCTCATTCGGCAGGAGAAACTGGAGCAGCTGG
CGCGGCGCTTCGACCGTAAGGCAGCCATGAGAGAGACGTGGCTCAACGAAAACCAGCGCCTGGT
GACCCAGGATAACTTCGGGTATGACCTGGCAGCTGTGGAGGCCGCCAAGAAGAAGCACGAAGCC
ATTGAGACCGACACGGCTGCCTATGAGGAGCGGGTGAAGGCACTGGAGGACCTGGCCCAGGAGC
TGGAGAAGGAGAATTACCATGACCAGAAGCGCATCAGTGCCAGGAAGAACAATATCCTCCGTCT
GTGGAGCTACCTGCAGGAGCTGCTGCGATCCCGGCGACAGCGGCTCGAGGCCACCCTGGCACTG
CAGAAGCTCTTCCAGGACATGCTGCACAGTATCGACTGGATGGATGAGATCAAGGCGCACATCT
TGTCTGCTGAATTTGGGAAGCACTTGTTAGAGGTTGAAGACCTGCTACAGAAACACAAGCTAAT
GGAAGCCGACATTGCTATCCAAGGGGACAAAGTGAAGACCATCACCGCGGCCACCCTGCAGTTC
ACTGAGGGGAAAGGGTATCAGCCTTGTGACCCCCAGGTCATCCAGGACCGTGTCAGCCACCTAG
AGCAATGCTTCAGTGAACTGAGCAACATGGCAGCTGGACGGAAGGCTCAGCTGGAGCAGTCTAA
GCGACTCTGGAAGTTCTTCTGGGAGATGGACGAGGCCGAAAGCTGGATCAAGGAAAAGGAACAG
ATCTACTCCTCCCTGGACTACGGCAAGGACCTGACGAGTGTGCTCATCTTACAGCGCAAGCACA
AGGCCTTCGAGGACGAGCTCCGTGGGCTCGATGCCCATCTGAAGCAGATCTTCCAGGAGGCTGA
GGACATGGTTGCACAAAAGCAGTTTGGACATCCACAGATCGAGACCCGTGTCAAAGAAGTATCG
GCTCAGTGGGACCACTTGAAAGAGCTGGCTGCCTTTCGTAAGAAAGACCTGCAGGATGCGGAAA
ACTTCTTCCAGTTCCAGGGTGATGCAGACGACCTGAAGGCTTGGCTGCAAGACGCTCACCGGCT
GCTTTCCGGTGAAGATGTGGGGCAAGACGAAGGAGCCACGAGGGCCCTGGGAAAGAAGCACAAG
GAGTTTCTAGAGGAGCTGGAGGAGAGCCGCGGGGTGATGGAGCACTTAGAGAACCAAGCCCAGG
GCTTCCCCGAGGAGTTTCGAGATTCCCCAGATGTGACAAACCGTCTACAGGCACTCAGGAAGCT
CTACCAGCAGGTGATGGCCCAGGCAGAATTGCGTGGACACAAGCTGCAGGAAGCCCTGGACTTG
TACACTGTGTTTGGAGAGTCAGACGCCTGTGAGCTGTGGATGACTGAGAAGGGGAAGTGGCTGG
ACCAGATGGATATCCCAAACACGCTGGAGGATCTGGAGGTTGTGCAGCACAGGTTTGACATCCT
GGACCAGGAGATGAAGACCTTGATGGCGCAGATTGATGGCGTGAACCTTGCGGCCAACAACCTG
GTAGAGAGCGGCCACCCACGCAGTGGGGAGGTGAAACAATATCAGGACCGCCTAAACAAGAGGT
GGCAGGCCTTCCAGGCAGTGGTGTCAGAGCAGAGAGAGGCTGTGGACTCGGCTCTCCGAGTAAA
CAATTACTGTGTAGACTGTGAGGAAACCAGCAAGTGGATCGTGGACAAGACGAAGGTTGTGGAG
TCTACCAAGGACTTGGGGCAGGACCTAGCAGGAGTCATTGCCATCCAGCGGAAGTTGTCAGGGT
TGGAGCGGGACGTATTGGCCATCCGGGATCGTGTGAGCGCCTTGGAACGGGAGTCGCAGTACTT
GATGGAGTCACACCCTGACCAGAAAGAGGACATTGGCCAGCGGCAAGCAGATGTCGAGAAGATG
TGGAAGGGCCTGCAAGATGCCTTGCAAGGTCAGGAGCTCTCCTTAGGTGAGGCCAGCAAGCTGC
AGGCTTTCCTACAAGACCTGGATGACTTCAAGGCCTGGCTGTCGATGGCCCAAAAGGCAGTGGC
CTCTGAGGACATGCCTGAGTCACTCCCAGAGGCTGAGCAACTCCTACAGCAGCATGCAGCCATT
AAAGAGGAGATTGATGCTCACAAAGACGATTACCACCGGGTCAAGGCCTCTGGGGAAAAAGTGA
TCGAAGGTCAAACTGACCCAGATTACCAGCTTCTGGGCCAGCGACTGGAGGGTCTAGATACTGA
CTGGGATGCTCTGTGGCGGATGTGGGAGAGCCGAGGGAACACCCTCACCCAGTGCCTGGGCTTC
CAGGAGTTCCAGAAAGATGCCAAGCAGGCTGAAGCCATCCTCAGCAACCAGGAATACACTCTGG
CTCACCTGGAGCCCCCAGACTCCCTAGCAGCTGCAGAGGCCGGCATCCGAAAGTTTGAGGATTT
CTTAGTGTCTATGGAAAACAACCGAGATAAAGTCCTGAGTCCTGTGGACTCCGGAAACATGCTG
GTGTCTGAGGGCAACCTGTACTCGAACAAGATCAAAGAGAAGGTGCAGCTGATTGAAGACAGGC
ACATGAAGAACAATGAGAAAGCCCAGGAGGTTACAGCTCTACTGAAAGACAACCTGGAGTTGCA
GAACTTCCTCCAGAACTGCAAGGAGCTCACTCTCTGGATCAATGACAAGCTGCTGACGTCTCCA
GACATCTCCTATGACGAAGCCCGCAACCTTCACAACAAATGGATGAAACACCAGGCATTTATGG
CAGAGCTGGCTTCACACCAAGGGTGGCTTGAGAACATCGTCGCGGAGGGAAGGCAGCTGATGGC
AGAGAAGCCCCAGTTCACGGATGTGGTGTCAGAAAGGCTGGAAGCCCTGCACAAGCTCTGGGAT
GAGCTGCAGACCACCACAAAGGCGAAGACGGAGCAACTCTCTGCTGCCCGGAGCTCTGACCTGC
GCTTGCAAACCCACGCCGACCTTAGCAAATGGATCAGCGCCATGGAGGACCAGCTGCGATCCGA
CGACCTGGGCAAGGATCTGACCACTGTCAACCGGATGTTGGTTAAGTTGAAGCGAGTGGAGGAA
CAAGTGAATTTGCGGAAGGAGGAGCTGGAGGAACTCTTTGCAGAGGCACCCCCACTGGGAGCAG
AGGCAGGAGACACGGACATGAGCATTGAAAAGCGGTTCCTAGACCTTCTAGAACCTCTGGGGAG
GAGGAAGAAGCAGCTGGAATTATCCAAAGCCAAGCTACAGATCAGCCGGGACTTAGAGGATGAG
ACGCTCTGGGTGGAAGAGAGGCTGCCGTTGGCGCAGTCAGCTGACTATGGCACTAATCTGCAAA
CAGTGCAGCTGTTCATGAAGAAGAACCAGACCCTGCAGAATGAGATCCTAGGCCACGCACCACG
GGTGGAGGATGTGCTACATCGAGGGCAGGAGCTGGTGAAGGCAGCCGAGATCGACTGCCAAGAC
ATCGAGGAGCGCTTGGGGCATCTGCAGAGCTCGTGGGACACGCTGCGGGAGGCGGCAGCTGGCC
GGCTGCAGCGCCTGCGGGAAGCTCACGAGGCACAGCAGTACTACCTGGATGCGGGCGAGGCTGA
AGCGTGGATCAGCGAGCAGGAGCTCTACGTGTTCTCTGACGAACCCCCTAAGGACGAAGAGGGC
GCCATCGTGATGCTCAAGCGGCACCTTCGGCAGCAGCGCACGGTGGAGGAATATGGAAGGAATA
TCAAACAGCTGGCTGGCCGCGCCCAGAGCCTGCTGTCTGCAGGCCACCCGGAGGGGGAGCAGAT
CATCAGACTTCAGGGGCAAGTGGATAAGCAGTATGCCGGGCTGAAGGACATGGCTGAGGAACGG
AGGCGGAAGCTAGAGAACATGTACCACCTGTTCCAGCTGAAGAGAGAGGCTGACGACTTGGAGC
AGTGGATTACGGAGAAAGAGATGGTGGCCTCATCCCAAGAAATGGGGCAGGACTTTGACCACGT
GACTATGCTCCGTGACAAGTTCCGAGACTTTGCCCGGGAGACCGGGGCTATCGGGCAGGAGCGA
GTAGACAATGTGAATTCTATCATTGAGCGTCTCATCGATGCGGGCCACAGCGAGGCAGCCACCA
TTGCAGAGTGGAAGGATGGGCTGAATGACATGTGGGCAGATCTGCTGGAGCTCATTGACACCCG
CATGCAGCTGCTGGCTGCCTCCTACGACCTGCACCGCTATTTCTACACGGGCACCGAGATCCTG
GGCCTCATAGATGAGAAGCACAGAGAGTTGCCAGAGGACGTGGGGCTGGACGCCAGCACAGCTG
AGTCCTTCCACCGGGTCCACACTGCCTTCGAGCGGGAGCTCCACCTCCTGGGTGTGCAGGTGCA
GCAGTTCCAGGACGTGGCCACCCGACTGCAGACAGCGTATGCTGGGGAGAAGGCAGATGCTATC
CAGAGCAAGGAGCAGGAGGTGTCCGCGGCCTGGCAGGCCCTGCTGGACGCGTGTGCTGGGCGCC
GAGCTCAGCTGGTAGATACGGCAGACAAGTTCCGCTTCTTCAGCATGGTGCGTGACCTCCTCTC
CTGGATGGAGAGCATCATCCGGCAGATCGAGACCCAGGAGAGACCCAGGGATGTCTCCTCGGTG
GAACTGCTCTTGAAGTATCACCAGGGCATCAAGGCAGAGATCAATACCAGGGCCAAGAACTTCA
GCACCTGCCTAGAACTTGGGGAGTCCCTGCTACAGAGGCAACACCAGGCTTCAGACGAGATCCG
GGAGAAATTACAGCAAGTGATATCCAGGAGGCAGGAGATGAATGACAAGTGGGAAGCCCGCTCT
GACAGGCTCCACATGCTGCTGGAGGTGTGCCAGTTCTCGAGGGACGCTTCTGTGGCCGAGGCAT
GGCTGATTGCCCAGGAGCCCTACCTGGCCAGCCGGGACTTTGGACATACGGTGGACAGCGTGGA
AAAGCTCATCAAGAGGCATGAGGCTTTTGAGAAGTCCACAGCCAGCTGGGCAGAGCGCTTTGCT
GCCCTGGAGAAGCCCACCACGCTTGAGCTTAAGGAACGCCAGACTCCAGACAGACCCACAGAGG
AACCTGGGCCTCAAGAGGAGGAAGGCGAGACAGCTGGCGAGGCTCCCCAGGTCCACCATGCGGC
CACGGAGAGAACATCCCCGGGGGAAGAAAGAGGGCCATGGCCTCAGGACCTGCAACCACCACCC
CTGCCAGGACACCACAAGGATGAGCAGGAGAAATCCGTTGGGGATGAGAGGCCTGCCACAGAGC
CCCTCTTTAAGGTCCTGGACACACCCCTGAGTGAGGGTGACGAACCCACAACGCTGCCAGCCCA
GCGAGACCTCGGGCATACTGTGCAGATGGAGGGCTACTTGGGCAGAAAGCACGACCTAGAGGGG
CCCAACAAGAAGGCCTCTAACAGGTCCTGGAACAACCTGTACTGTGTGCTCAGGAACAGCCAGC
TGACCTTCTACAAGGACGCTAAGAACCTGGCCCTCGGGGTGCCCTACCATGGAGAGGAGCCCCT
GGCCCTGAGGCACGCCATCTGTGAGATTGCTGTCAACTATAAGAAGAAGAAGCATGTGTTTAAG
CTGAGGTTAAGCAACGGCAGTGAATGGCTTTTCCATGGCAAGGATGAGGAGGAGATGCTGTTGT
GGCTACAGGGCATGAGCACGGCCATCAACGAGTCCCAGAGCATCCGTGTCAAGGCACAGAGTCT
GCCCCTGCCTTCCCTGGCTGGTCCTGATGCCAGCGTAGGCAAGAAGGACAAGGAGAAGAGGTTT
AGCTTCTTCCCCAAAAAGAAGTAGCAGCTGGGGGCCCCCATGGGCGGGGCCAGCCAGGCAGCAC
TGCAGTGTGCACTGGGACATGCAAGGACAAGGAGCCCATGGCCTCGACCTCTGCAGTGGCCAGT
CCTCCTCCCGCCTGCCACTCACTGCCTGCAGCCTGCCTGCTCAAGTTGCTGGGCCAGCCCCAGG
GCCCCACACTGCACTGCAATAGCTGCCTTGCCTGCCTGGCCTCCCTGGTCTTCCCAATGCCTGC
CAACAGCCCTCCACCCCTCCTACCCCATGCAGCTGGCTGGGCTCCAGGGACTGGAGGTCCAGCT
CCTTTGGGGCTGGAAAAGAGTGTAAGGCATATACTCTCCTCTTCCTGCCTACAGGCTGGGATGC
CTGATGGGTTCCCTCCAGCACTGCCCACTACCACAGCAAATCCCCTTTGGGGTCACTGACCATA
GTCAGCCAGGGAAAGGAAAATGAATATGATGATAGTTGCCCTGTTCCTTAGGGGCGGGAGGAAG
GGCCTTCAGAACCAGCTCTGGGCAAGGGGCTGGTGGGGTACCAAGGGGACAATACGGATGTCAA
GCTGTGAGTACTGCCAGTCTCCTCCCCGCTGGGCTCCTTCAGCAACAGGACTCTCTCCTCAGGG
CTAGTACGTCCCTTCTTTCCTCTTCTCACACCCCTAAGAGTTTTGGTGAGTCCCGAGTGAATGA
GCCTCCTCCTTCCAATGACACCCTTTAATCCTGGCATCAACAGTGTTAGGGCCAGAAGCCCTCA
CACCACTCTCTTGGAAACCCTGGTACCACTTAGGGTTCAGACCTCTGTCACAGGAGGGACAGAC
AGGTCCACACTTCTGAAGCCTCTGCCTATAGTGCAGCTCTTTCTCCCATTCCCAGTTGCAGCCA
AACCAACAGCGCGTGGTGAGGGCTGGCGCCAGAGACAAGCTGCATACCCAGATCCTACAGTCAA
GTATCTCAAAGCTACACGCCCTCCTATAATCCGCTGCCCTGGCAGCTAGCACCAGCCAGGCCAG
TGGCTGGACACAGCTGTTTATTACCTAGGGGTGACAAATGTAGGCTTGTGACAGTTACCCCTGG
AACATAGGGATGCGTGTTGAGGTTATTTTGTGAAGGTATGGCTCTTCTTGGTTGGTTTCTGCAG
ACCTAGATTTTGGGGTCGCCTGGTATAGAGATCACCAAGCATCAAAAGGGGCTCTGCAGCCTGT
CCCTGGGGTGCTTTCCCATGCCCGTGGAAGACTAAGACCACTGGTCCTACAGACATGCTCTGCT
TCACAACTGGAAGCAACACAGCTTCAGCCCAACATGGCAGCTGGAGTTAGGTCCAAAAGATGGT
TGAGGTGAGGGCAAGGGGCCTTTTCACCCAGGAGACCATCTGTGTTCCTAGGGCCCACAGCCAG
TTTCTACTGCCTTCCCCATGGGTAAGGCTCAATGGTAGGCATACAGTTACTAGGCCTTCCCAGA
ATCCCTTACTGTTGACCAGGCAGGTATAGCTCAGAGATCAGTTGCACCCGGTGACCCCCCCAAC
ATGACCTGAGTATGAACTCAACTCCAGTGGATGACAACCCCCTTCGCCAGTGGGGCCTGATTTC
TTCATCTCCACAGCCGGTCTGAAACTTGGCCTCAGGGTATAGGACCCTGTAACTCTCTCCTACA
GGGAACACAGTGGGCACCACTCATCAGCCTCTTTGTACAGCTGGAGAAACCAAAGCGGTAGACA
GGGAGGCATCTGCACCCCTGACAATAAGAATGGCCTTGGTACACCGAAAGGCATGTCTATCTCT
GGGACAGGAAGTGGGCTCCTCGATGAAGCATTAGGTGGCAAGCAACTCCCTCAGGCACTTTCCC
TGGCCTAGTCTTTGGGGGACCAAAGGATGAGGGTCTACATTTCCCTTCTACATGTACCCAAGTA
GCGCCTGAAGTGAGACTTTTCCAGTAACTCCACAGAGCCAAGACAGAAAAAAGGCTCTAGTGGA
AGAGCTAGGATTTCACTGCAAAGGATTATTCAAGGGTAGTAAGCTACAAGTGACCTACCATCAC
AGCCAGATCCCCACACTTCTCACCAGTCACCCAGGCCCCAAGGCCCTCAACATACTGGACTGAC
TTCGCGGGAACTCTGTGCACTCCAGGGCCAGGCTCTCCTGATGCCCTGGCAAGGCTGGCTTTTC
TCCTGGTATTTTCTACTTTGCAGTCTTCCCTGACAGTATTCCCAAAGTGGGTTAACACAGCTCC
AGTCCACACCAGCATAACAGGCTTCCTCCCCGGGCGGTTGGAGGAAGCTCTCTGGGCACAGCCA
GGCAGCTCTCCTTCCCTCCCCATTGCCTTTGTCCTGGGCCTGGGCAGGCAGGCTGAAGAGGTGC
AGCGGTTCCTGGGACCCTCCCACCCCACCTCTACTGGTACTAACAGAAGTCTGTGTAGGCTCGG
CTCCCTTCCCTTCCCCATCTTCTCCTTCCTGCCTACTGGAGGGCAACAGGTCCCCTAAGCTGGT
TCTGGATCTCCTTCCTCCATCAACAAGATACCAGCAGGCTGCACAGCTTGGTCCCTTGGACAAG
CAAGCTCAGGGAGGGCACAAGGTGAAATGAAGGTAGAGAAATGAAACCCCGTTGGGCAGAGATC
ATGCCATCTGGGGCTGGCTGGGCCTTGTCCTCCACCCGCTCAAATGTGCTTCCACCAACCAGAG
GAATCCCATTTACTAGTTTTTCTAATAAATCAATAATACTCC

hide sequence

RefSeq Acc Id:

XM_017594142 ⟹ XP_017449631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	101,043,512 - 101,170,374 (-)	NCBI
mRatBN7.2	6	95,313,049 - 95,437,221 (-)	NCBI
Rnor_6.0	6	99,657,144 - 99,783,189 (-)	NCBI

Sequence:

show sequence

CCCCGCCGCGGGACTATCTGGTCCCGGCAGCAGCGATGTCCCCCGGCAGGAATGTCCCTCCTCA
GATAATGTTATTTATATCTCTGGGCGGGTCCGTGGCTCCGCAGCACCAGGCGCCCGGCGGCCGC
TGTGCCAGGAGCCCCGTGCTGCCCTCCTCCCCCTGCGCCGCCGCCCCCGGGCTCGGGGTGGCCG
CCGCTTCAGCCCCAGCGCAGGATCTGGACCAACCTGGGAGGCAAGCCTCCAGACCCAAGTGAAG
GATTCTCCACACTGGTTAGCCTCTGGCTGTGCCTGTGAGGGATTGTCTTGGTAAGGTTAATAAC
TAAGGGACTCTTCCATGAAGACTGAGCCAGGCATAGCTGCTAAGAAGAGCCTGCTGACATGACA
TCAGCCACGGAGTTTGAAAACGTGGGCAACCAGCCACCATACAGCCGGATTAATGCCCGCTGGG
ACGCCCCAGATGATGAACTGGACAACGATAGCAGCTCAGCCAGGCTCTTTGAGAGGTCCCGGAT
CAAGGCCTTGGCAGATGAGCGGGAAGTGGTTCAGAAGAAAACCTTTACGAAATGGGTGAACTCC
CACCTGGCTCGAGTGTCCTGCCGCATCAGCGATCTCTACAAGGACCTGCGGGATGGACGCATGC
TCATCAAGCTGCTGGAGGTGCTCTCCGGAGAGATGCTGCCAAGGCCGACCAAGGGCAAGATGCG
CATCCACTGCCTGGAGAACGTGGACAAAGCCCTGCAGTTCCTCAAGGAGCAGCGCGTGCACCTG
GAAAACATGGGCTCCCACGACATCGTGGATGGCAACCACCGCCTGGTCCTGGGCCTCATCTGGA
CGATTATCCTCCGATTCCAGATTCAAGACATTGTTGTCCAAACTCAAGAAGGTCGGGAGACACG
CTCAGCCAAGGATGCTCTGCTTCTGTGGTGCCAGATGAAGACAGCCGGCTACCCCCAAGTCAAC
GTAACCAACTTCACCTCCAGCTGGAAGGACGGCCTGGCCTTCAATGCCCTAATTCATAAACACC
GGCCTGACCTCATTGACTTTGACAAGCTAAAGGACTCCAATGCCCGGCATAACTTGGAGCACGC
ATTTGATGTGGCCGAGCGTCAGCTGGGCATCATCCCACTCCTTGACCCCGAAGATGTCTTCACA
GAAAACCCAGACGAGAAGTCCATCATCACCTACGTGGTAGCATTTTACCACTACTTCTCCAAGA
TGAAGGTGCTAGCGGTGGAGGGCAAGAGAGTCGGCAAGGTCATTGACCATGCCATTGAGACTGA
GAAGATGATTGAAAAGTACAGTGGGCTAGCCTCAGACCTGCTCACCTGGATTGAGCAAACCATT
AGCGTCCTGAACAGCCGCAAGTTTGCCAACTCATTGAGTGGCGTCCAGCAGCAGCTACAGGCCT
TCAGCACCTACCGCACTGTGGAGAAGCCACCCAAGTTTCAAGAGAAGGGGAATCTGGAAGTCCT
CCTGTTCACTATCCAATCCCGAATGAGAGCCAACAATCAGAAAGTGTACACGCCCCACGATGGG
AAGCTAGTGTCTGACATCAACAGGGCCTGGGAGAGCCTAGAGGAAGCAGAATACCAAAGGGAGC
TGGCCCTGAGGAGCGAGCTCATTCGGCAGGAGAAACTGGAGCAGCTGGCGCGGCGCTTCGACCG
TAAGGCAGCCATGAGAGAGACGTGGCTCAACGAAAACCAGCGCCTGGTGACCCAGGATAACTTC
GGGTATGACCTGGCAGCTGTGGAGGCCGCCAAGAAGAAGCACGAAGCCATTGAGACCGACACGG
CTGCCTATGAGGAGCGGGTGAAGGCACTGGAGGACCTGGCCCAGGAGCTGGAGAAGGAGAATTA
CCATGACCAGAAGCGCATCAGTGCCAGGAAGAACAATATCCTCCGTCTGTGGAGCTACCTGCAG
GAGCTGCTGCGATCCCGGCGACAGCGGCTCGAGGCCACCCTGGCACTGCAGAAGCTCTTCCAGG
ACATGCTGCACAGTATCGACTGGATGGATGAGATCAAGGCGCACATCTTGTCTGCTGAATTTGG
GAAGCACTTGTTAGAGGTTGAAGACCTGCTACAGAAACACAAGCTAATGGAAGCCGACATTGCT
ATCCAAGGGGACAAAGTGAAGACCATCACCGCGGCCACCCTGCAGTTCACTGAGGGGAAAGGGT
ATCAGCCTTGTGACCCCCAGGTCATCCAGGACCGTGTCAGCCACCTAGAGCAATGCTTCAGTGA
ACTGAGCAACATGGCAGCTGGACGGAAGGCTCAGCTGGAGCAGTCTAAGCGACTCTGGAAGTTC
TTCTGGGAGATGGACGAGGCCGAAAGCTGGATCAAGGAAAAGGAACAGATCTACTCCTCCCTGG
ACTACGGCAAGGACCTGACGAGTGTGCTCATCTTACAGCGCAAGCACAAGGCCTTCGAGGACGA
GCTCCGTGGGCTCGATGCCCATCTGAAGCAGATCTTCCAGGAGGCTGAGGACATGGTTGCACAA
AAGCAGTTTGGACATCCACAGATCGAGACCCGTGTCAAAGAAGTATCGGCTCAGTGGGACCACT
TGAAAGAGCTGGCTGCCTTTCGTAAGAAAGACCTGCAGGATGCGGAAAACTTCTTCCAGTTCCA
GGGTGATGCAGACGACCTGAAGGCTTGGCTGCAAGACGCTCACCGGCTGCTTTCCGGTGAAGAT
GTGGGGCAAGACGAAGGAGCCACGAGGGCCCTGGGAAAGAAGCACAAGGAGTTTCTAGAGGAGC
TGGAGGAGAGCCGCGGGGTGATGGAGCACTTAGAGAACCAAGCCCAGGGCTTCCCCGAGGAGTT
TCGAGATTCCCCAGATGTGACAAACCGTCTACAGGCACTCAGGAAGCTCTACCAGCAGGTGATG
GCCCAGGCAGAATTGCGTGGACACAAGCTGCAGGAAGCCCTGGACTTGTACACTGTGTTTGGAG
AGTCAGACGCCTGTGAGCTGTGGATGACTGAGAAGGGGAAGTGGCTGGACCAGATGGATATCCC
AAACACGCTGGAGGATCTGGAGGTTGTGCAGCACAGGTTTGACATCCTGGACCAGGAGATGAAG
ACCTTGATGGCGCAGATTGATGGCGTGAACCTTGCGGCCAACAACCTGGTAGAGAGCGGCCACC
CACGCAGTGGGGAGGTGAAACAATATCAGGACCGCCTAAACAAGAGGTGGCAGGCCTTCCAGGC
AGTGGTGTCAGAGCAGAGAGAGGCTGTGGACTCGGCTCTCCGAGTAAACAATTACTGTGTAGAC
TGTGAGGAAACCAGCAAGTGGATCGTGGACAAGACGAAGGTTGTGGAGTCTACCAAGGACTTGG
GGCAGGACCTAGCAGGAGTCATTGCCATCCAGCGGAAGTTGTCAGGGTTGGAGCGGGACGTATT
GGCCATCCGGGATCGTGTGAGCGCCTTGGAACGGGAGTCGCAGTACTTGATGGAGTCACACCCT
GACCAGAAAGAGGACATTGGCCAGCGGCAAGCAGATGTCGAGAAGATGTGGAAGGGCCTGCAAG
ATGCCTTGCAAGGTCAGGAGCTCTCCTTAGGTGAGGCCAGCAAGCTGCAGGCTTTCCTACAAGA
CCTGGATGACTTCAAGGCCTGGCTGTCGATGGCCCAAAAGGCAGTGGCCTCTGAGGACATGCCT
GAGTCACTCCCAGAGGCTGAGCAACTCCTACAGCAGCATGCAGCCATTAAAGAGGAGATTGATG
CTCACAAAGACGATTACCACCGGGTCAAGGCCTCTGGGGAAAAAGTGATCGAAGGTCAAACTGA
CCCAGATTACCAGCTTCTGGGCCAGCGACTGGAGGGTCTAGATACTGACTGGGATGCTCTGTGG
CGGATGTGGGAGAGCCGAGGGAACACCCTCACCCAGTGCCTGGGCTTCCAGGAGTTCCAGAAAG
ATGCCAAGCAGGCTGAAGCCATCCTCAGCAACCAGGAATACACTCTGGCTCACCTGGAGCCCCC
AGACTCCCTAGCAGCTGCAGAGGCCGGCATCCGAAAGTTTGAGGATTTCTTAGTGTCTATGGAA
AACAACCGAGATAAAGTCCTGAGTCCTGTGGACTCCGGAAACATGCTGGTGTCTGAGGGCAACC
TGTACTCGAACAAGATCAAAGAGAAGGTGCAGCTGATTGAAGACAGGCACATGAAGAACAATGA
GAAAGCCCAGGAGGTTACAGCTCTACTGAAAGACAACCTGGAGTTGCAGAACTTCCTCCAGAAC
TGCAAGGAGCTCACTCTCTGGATCAATGACAAGCTGCTGACGTCTCCAGACATCTCCTATGACG
AAGCCCGCAACCTTCACAACAAATGGATGAAACACCAGGCATTTATGGCAGAGCTGGCTTCACA
CCAAGGGTGGCTTGAGAACATCGTCGCGGAGGGAAGGCAGCTGATGGCAGAGAAGCCCCAGTTC
ACGGATGTGGTGTCAGAAAGGCTGGAAGCCCTGCACAAGCTCTGGGATGAGCTGCAGACCACCA
CAAAGGCGAAGACGGAGCAACTCTCTGCTGCCCGGAGCTCTGACCTGCGCTTGCAAACCCACGC
CGACCTTAGCAAATGGATCAGCGCCATGGAGGACCAGCTGCGATCCGACGACCTGGGCAAGGAT
CTGACCACTGTCAACCGGATGTTGGTTAAGTTGAAGCGAGTGGAGGAACAAGTGAATTTGCGGA
AGGAGGAGCTGGAGGAACTCTTTGCAGAGGCACCCCCACTGGGAGCAGAGGCAGGAGACACGGA
CATGAGCATTGAAAAGCGGTTCCTAGACCTTCTAGAACCTCTGGGGAGGAGGAAGAAGCAGCTG
GAATTATCCAAAGCCAAGCTACAGATCAGCCGGGACTTAGAGGATGAGACGCTCTGGGTGGAAG
AGAGGCTGCCGTTGGCGCAGTCAGCTGACTATGGCACTAATCTGCAAACAGTGCAGCTGTTCAT
GAAGAAGAACCAGACCCTGCAGAATGAGATCCTAGGCCACGCACCACGGGTGGAGGATGTGCTA
CATCGAGGGCAGGAGCTGGTGAAGGCAGCCGAGATCGACTGCCAAGACATCGAGGAGCGCTTGG
GGCATCTGCAGAGCTCGTGGGACACGCTGCGGGAGGCGGCAGCTGGCCGGCTGCAGCGCCTGCG
GGAAGCTCACGAGGCACAGCAGTACTACCTGGATGCGGGCGAGGCTGAAGCGTGGATCAGCGAG
CAGGAGCTCTACGTGTTCTCTGACGAACCCCCTAAGGACGAAGAGGGCGCCATCGTGATGCTCA
AGCGGCACCTTCGGCAGCAGCGCACGGTGGAGGAATATGGAAGGAATATCAAACAGCTGGCTGG
CCGCGCCCAGAGCCTGCTGTCTGCAGGCCACCCGGAGGGGGAGCAGATCATCAGACTTCAGGGG
CAAGTGGATAAGCAGTATGCCGGGCTGAAGGACATGGCTGAGGAACGGAGGCGGAAGCTAGAGA
ACATGTACCACCTGTTCCAGCTGAAGAGAGAGGCTGACGACTTGGAGCAGTGGATTACGGAGAA
AGAGATGGTGGCCTCATCCCAAGAAATGGGGCAGGACTTTGACCACGTGACTATGCTCCGTGAC
AAGTTCCGAGACTTTGCCCGGGAGACCGGGGCTATCGGGCAGGAGCGAGTAGACAATGTGAATT
CTATCATTGAGCGTCTCATCGATGCGGGCCACAGCGAGGCAGCCACCATTGCAGAGTGGAAGGA
TGGGCTGAATGACATGTGGGCAGATCTGCTGGAGCTCATTGACACCCGCATGCAGCTGCTGGCT
GCCTCCTACGACCTGCACCGCTATTTCTACACGGGCACCGAGATCCTGGGCCTCATAGATGAGA
AGCACAGAGAGTTGCCAGAGGACGTGGGGCTGGACGCCAGCACAGCTGAGTCCTTCCACCGGGT
CCACACTGCCTTCGAGCGGGAGCTCCACCTCCTGGGTGTGCAGGTGCAGCAGTTCCAGGACGTG
GCCACCCGACTGCAGACAGCGTATGCTGGGGAGAAGGCAGATGCTATCCAGAGCAAGGAGCAGG
AGGTGTCCGCGGCCTGGCAGGCCCTGCTGGACGCGTGTGCTGGGCGCCGAGCTCAGCTGGTAGA
TACGGCAGACAAGTTCCGCTTCTTCAGCATGGTGCGTGACCTCCTCTCCTGGATGGAGAGCATC
ATCCGGCAGATCGAGACCCAGGAGAGACCCAGGGATGTCTCCTCGGTGGAACTGCTCTTGAAGT
ATCACCAGGGCATCAAGGCAGAGATCAATACCAGGGCCAAGAACTTCAGCACCTGCCTAGAACT
TGGGGAGTCCCTGCTACAGAGGCAACACCAGGCTTCAGACGAGATCCGGGAGAAATTACAGCAA
GTGATATCCAGGAGGCAGGAGATGAATGACAAGTGGGAAGCCCGCTCTGACAGGCTCCACATGC
TGCTGGAGGTGTGCCAGTTCTCGAGGGACGCTTCTGTGGCCGAGGCATGGCTGATTGCCCAGGA
GCCCTACCTGGCCAGCCGGGACTTTGGACATACGGTGGACAGCGTGGAAAAGCTCATCAAGAGG
CATGAGGCTTTTGAGAAGTCCACAGCCAGCTGGGCAGAGCGCTTTGCTGCCCTGGAGAAGCCCA
CCACGCTTGAGCTTAAGGAACGCCAGACTCCAGACAGACCCACAGAGGAACCTGGGCCTCAAGA
GGAGGAAGGCGAGACAGCTGGCGAGGCTCCCCAGGTCCACCATGCGGCCACGGAGAGAACATCC
CCGGGGGAAGAAAGAGGGCCATGGCCTCAGGACCTGCAACCACCACCCCTGCCAGGACACCACA
AGGATGAGCAGGAGAAATCCGTTGGGGATGAGAGGCCTGCCACAGAGCCCCTCTTTAAGGTCCT
GGACACACCCCTGAGTGAGGGTGACGAACCCACAACGCTGCCAGCCCAGCGAGACCTCGGGCAT
ACTGTGCAGATGGAGGGCTACTTGGGCAGAAAGCACGACCTAGAGGGGCCCAACAAGAAGGCCT
CTAACAGGTCCTGGAACAACCTGTACTGTGTGCTCAGGAACAGCCAGCTGACCTTCTACAAGGA
CGCTAAGAACCTGGCCCTCGGGGTGCCCTACCATGGAGAGGAGCCCCTGGCCCTGAGGCACGCC
ATCTGTGAGATTGCTGTCAACTATAAGAAGAAGAAGCATGTGTTTAAGCTGAGGTTAAGCAACG
GCAGTGAATGGCTTTTCCATGGCAAGGATGAGGAGGAGATGCTGTTGTGGCTACAGGGCATGAG
CACGGCCATCAACGAGTCCCAGAGCATCCGTGTCAAGGCACAGAGTCTGCCCCTGCCTTCCCTG
GCTGGTCCTGATGCCAGCGTAGGCAAGAAGGACAAGGAGAAGAGGTTTAGCTTCTTCCCCAAAA
AGAAGTAGCAGCTGGGGGCCCCCATGGGCGGGGCCAGCCAGGCAGCACTGCAGTGTGCACTGGG
ACATGCAAGGACAAGGAGCCCATGGCCTCGACCTCTGCAGTGGCCAGTCCTCCTCCCGCCTGCC
ACTCACTGCCTGCAGCCTGCCTGCTCAAGTTGCTGGGCCAGCCCCAGGGCCCCACACTGCACTG
CAATAGCTGCCTTGCCTGCCTGGCCTCCCTGGTCTTCCCAATGCCTGCCAACAGCCCTCCACCC
CTCCTACCCCATGCAGCTGGCTGGGCTCCAGGGACTGGAGGTCCAGCTCCTTTGGGGCTGGAAA
AGAGTGTAAGGCATATACTCTCCTCTTCCTGCCTACAGGCTGGGATGCCTGATGGGTTCCCTCC
AGCACTGCCCACTACCACAGCAAATCCCCTTTGGGGTCACTGACCATAGTCAGCCAGGGAAAGG
AAAATGAATATGATGATAGTTGCCCTGTTCCTTAGGGGCGGGAGGAAGGGCCTTCAGAACCAGC
TCTGGGCAAGGGGCTGGTGGGGTACCAAGGGGACAATACGGATGTCAAGCTGTGAGTACTGCCA
GTCTCCTCCCCGCTGGGCTCCTTCAGCAACAGGACTCTCTCCTCAGGGCTAGTACGTCCCTTCT
TTCCTCTTCTCACACCCCTAAGAGTTTTGGTGAGTCCCGAGTGAATGAGCCTCCTCCTTCCAAT
GACACCCTTTAATCCTGGCATCAACAGTGTTAGGGCCAGAAGCCCTCACACCACTCTCTTGGAA
ACCCTGGTACCACTTAGGGTTCAGACCTCTGTCACAGGAGGGACAGACAGGTCCACACTTCTGA
AGCCTCTGCCTATAGTGCAGCTCTTTCTCCCATTCCCAGTTGCAGCCAAACCAACAGCGCGTGG
TGAGGGCTGGCGCCAGAGACAAGCTGCATACCCAGATCCTACAGTCAAGTATCTCAAAGCTACA
CGCCCTCCTATAATCCGCTGCCCTGGCAGCTAGCACCAGCCAGGCCAGTGGCTGGACACAGCTG
TTTATTACCTAGGGGTGACAAATGTAGGCTTGTGACAGTTACCCCTGGAACATAGGGATGCGTG
TTGAGGTTATTTTGTGAAGGTATGGCTCTTCTTGGTTGGTTTCTGCAGACCTAGATTTTGGGGT
CGCCTGGTATAGAGATCACCAAGCATCAAAAGGGGCTCTGCAGCCTGTCCCTGGGGTGCTTTCC
CATGCCCGTGGAAGACTAAGACCACTGGTCCTACAGACATGCTCTGCTTCACAACTGGAAGCAA
CACAGCTTCAGCCCAACATGGCAGCTGGAGTTAGGTCCAAAAGATGGTTGAGGTGAGGGCAAGG
GGCCTTTTCACCCAGGAGACCATCTGTGTTCCTAGGGCCCACAGCCAGTTTCTACTGCCTTCCC
CATGGGTAAGGCTCAATGGTAGGCATACAGTTACTAGGCCTTCCCAGAATCCCTTACTGTTGAC
CAGGCAGGTATAGCTCAGAGATCAGTTGCACCCGGTGACCCCCCCAACATGACCTGAGTATGAA
CTCAACTCCAGTGGATGACAACCCCCTTCGCCAGTGGGGCCTGATTTCTTCATCTCCACAGCCG
GTCTGAAACTTGGCCTCAGGGTATAGGACCCTGTAACTCTCTCCTACAGGGAACACAGTGGGCA
CCACTCATCAGCCTCTTTGTACAGCTGGAGAAACCAAAGCGGTAGACAGGGAGGCATCTGCACC
CCTGACAATAAGAATGGCCTTGGTACACCGAAAGGCATGTCTATCTCTGGGACAGGAAGTGGGC
TCCTCGATGAAGCATTAGGTGGCAAGCAACTCCCTCAGGCACTTTCCCTGGCCTAGTCTTTGGG
GGACCAAAGGATGAGGGTCTACATTTCCCTTCTACATGTACCCAAGTAGCGCCTGAAGTGAGAC
TTTTCCAGTAACTCCACAGAGCCAAGACAGAAAAAAGGCTCTAGTGGAAGAGCTAGGATTTCAC
TGCAAAGGATTATTCAAGGGTAGTAAGCTACAAGTGACCTACCATCACAGCCAGATCCCCACAC
TTCTCACCAGTCACCCAGGCCCCAAGGCCCTCAACATACTGGACTGACTTCGCGGGAACTCTGT
GCACTCCAGGGCCAGGCTCTCCTGATGCCCTGGCAAGGCTGGCTTTTCTCCTGGTATTTTCTAC
TTTGCAGTCTTCCCTGACAGTATTCCCAAAGTGGGTTAACACAGCTCCAGTCCACACCAGCATA
ACAGGCTTCCTCCCCGGGCGGTTGGAGGAAGCTCTCTGGGCACAGCCAGGCAGCTCTCCTTCCC
TCCCCATTGCCTTTGTCCTGGGCCTGGGCAGGCAGGCTGAAGAGGTGCAGCGGTTCCTGGGACC
CTCCCACCCCACCTCTACTGGTACTAACAGAAGTCTGTGTAGGCTCGGCTCCCTTCCCTTCCCC
ATCTTCTCCTTCCTGCCTACTGGAGGGCAACAGGTCCCCTAAGCTGGTTCTGGATCTCCTTCCT
CCATCAACAAGATACCAGCAGGCTGCACAGCTTGGTCCCTTGGACAAGCAAGCTCAGGGAGGGC
ACAAGGTGAAATGAAGGTAGAGAAATGAAACCCCGTTGGGCAGAGATCATGCCATCTGGGGCTG
GCTGGGCCTTGTCCTCCACCCGCTCAAATGTGCTTCCACCAACCAGAGGAATCCCATTTACTAG
TTTTTCTAATAAATCAATAATACTCC

hide sequence

RefSeq Acc Id:

XM_017594143 ⟹ XP_017449632

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	101,043,512 - 101,170,374 (-)	NCBI
mRatBN7.2	6	95,313,049 - 95,437,221 (-)	NCBI
Rnor_6.0	6	99,657,144 - 99,783,189 (-)	NCBI

Sequence:

show sequence

CCCCGCCGCGGGACTATCTGGTCCCGGCAGCAGCGATGTCCCCCGGCAGGAATGTCCCTCCTCA
GATAATGTTATTTATATCTCTGGGCGGGTCCGTGGCTCCGCAGCACCAGGCGCCCGGCGGCCGC
TGTGCCAGGAGCCCCGTGCTGCCCTCCTCCCCCTGCGCCGCCGCCCCCGGGCTCGGGGTGGCCG
CCGCTTCAGCCCCAGCGCAGGATCTGGACCAACCTGGGAGGCAAGCCTCCAGACCCAAGTGAAG
GATTCTCCACACTGGTTAGCCTCTGGCTGTGCCTGTGAGGGATTGTCTTGGGACTCTTCCATGA
AGACTGAGCCAGGCATAGCTGCTAAGAAGAGCCTGCTGACATGACATCAGCCACGGAGTTTGAA
AACGTGGGCAACCAGCCACCATACAGCCGGATTAATGCCCGCTGGGACGCCCCAGATGATGAAC
TGGACAACGATAGCAGCTCAGCCAGGCTCTTTGAGAGGTCCCGGATCAAGGCCTTGGCAGATGA
GCGGGAAGTGGTTCAGAAGAAAACCTTTACGAAATGGGTGAACTCCCACCTGGCTCGAGTGTCC
TGCCGCATCAGCGATCTCTACAAGGACCTGCGGGATGGACGCATGCTCATCAAGCTGCTGGAGG
TGCTCTCCGGAGAGATGCTGCCAAGGCCGACCAAGGGCAAGATGCGCATCCACTGCCTGGAGAA
CGTGGACAAAGCCCTGCAGTTCCTCAAGGAGCAGCGCGTGCACCTGGAAAACATGGGCTCCCAC
GACATCGTGGATGGCAACCACCGCCTGGTCCTGGGCCTCATCTGGACGATTATCCTCCGATTCC
AGATTCAAGACATTGTTGTCCAAACTCAAGAAGGTCGGGAGACACGCTCAGCCAAGGATGCTCT
GCTTCTGTGGTGCCAGATGAAGACAGCCGGCTACCCCCAAGTCAACGTAACCAACTTCACCTCC
AGCTGGAAGGACGGCCTGGCCTTCAATGCCCTAATTCATAAACACCGGCCTGACCTCATTGACT
TTGACAAGCTAAAGGACTCCAATGCCCGGCATAACTTGGAGCACGCATTTGATGTGGCCGAGCG
TCAGCTGGGCATCATCCCACTCCTTGACCCCGAAGATGTCTTCACAGAAAACCCAGACGAGAAG
TCCATCATCACCTACGTGGTAGCATTTTACCACTACTTCTCCAAGATGAAGGTGCTAGCGGTGG
AGGGCAAGAGAGTCGGCAAGGTCATTGACCATGCCATTGAGACTGAGAAGATGATTGAAAAGTA
CAGTGGGCTAGCCTCAGACCTGCTCACCTGGATTGAGCAAACCATTAGCGTCCTGAACAGCCGC
AAGTTTGCCAACTCATTGAGTGGCGTCCAGCAGCAGCTACAGGCCTTCAGCACCTACCGCACTG
TGGAGAAGCCACCCAAGTTTCAAGAGAAGGGGAATCTGGAAGTCCTCCTGTTCACTATCCAATC
CCGAATGAGAGCCAACAATCAGAAAGTGTACACGCCCCACGATGGGAAGCTAGTGTCTGACATC
AACAGGGCCTGGGAGAGCCTAGAGGAAGCAGAATACCAAAGGGAGCTGGCCCTGAGGAGCGAGC
TCATTCGGCAGGAGAAACTGGAGCAGCTGGCGCGGCGCTTCGACCGTAAGGCAGCCATGAGAGA
GACGTGGCTCAACGAAAACCAGCGCCTGGTGACCCAGGATAACTTCGGGTATGACCTGGCAGCT
GTGGAGGCCGCCAAGAAGAAGCACGAAGCCATTGAGACCGACACGGCTGCCTATGAGGAGCGGG
TGAAGGCACTGGAGGACCTGGCCCAGGAGCTGGAGAAGGAGAATTACCATGACCAGAAGCGCAT
CAGTGCCAGGAAGAACAATATCCTCCGTCTGTGGAGCTACCTGCAGGAGCTGCTGCGATCCCGG
CGACAGCGGCTCGAGGCCACCCTGGCACTGCAGAAGCTCTTCCAGGACATGCTGCACAGTATCG
ACTGGATGGATGAGATCAAGGCGCACATCTTGTCTGCTGAATTTGGGAAGCACTTGTTAGAGGT
TGAAGACCTGCTACAGAAACACAAGCTAATGGAAGCCGACATTGCTATCCAAGGGGACAAAGTG
AAGACCATCACCGCGGCCACCCTGCAGTTCACTGAGGGGAAAGGGTATCAGCCTTGTGACCCCC
AGGTCATCCAGGACCGTGTCAGCCACCTAGAGCAATGCTTCAGTGAACTGAGCAACATGGCAGC
TGGACGGAAGGCTCAGCTGGAGCAGTCTAAGCGACTCTGGAAGTTCTTCTGGGAGATGGACGAG
GCCGAAAGCTGGATCAAGGAAAAGGAACAGATCTACTCCTCCCTGGACTACGGCAAGGACCTGA
CGAGTGTGCTCATCTTACAGCGCAAGCACAAGGCCTTCGAGGACGAGCTCCGTGGGCTCGATGC
CCATCTGAAGCAGATCTTCCAGGAGGCTGAGGACATGGTTGCACAAAAGCAGTTTGGACATCCA
CAGATCGAGACCCGTGTCAAAGAAGTATCGGCTCAGTGGGACCACTTGAAAGAGCTGGCTGCCT
TTCGTAAGAAAGACCTGCAGGATGCGGAAAACTTCTTCCAGTTCCAGGGTGATGCAGACGACCT
GAAGGCTTGGCTGCAAGACGCTCACCGGCTGCTTTCCGGTGAAGATGTGGGGCAAGACGAAGGA
GCCACGAGGGCCCTGGGAAAGAAGCACAAGGAGTTTCTAGAGGAGCTGGAGGAGAGCCGCGGGG
TGATGGAGCACTTAGAGAACCAAGCCCAGGGCTTCCCCGAGGAGTTTCGAGATTCCCCAGATGT
GACAAACCGTCTACAGGCACTCAGGAAGCTCTACCAGCAGGTGATGGCCCAGGCAGAATTGCGT
GGACACAAGCTGCAGGAAGCCCTGGACTTGTACACTGTGTTTGGAGAGTCAGACGCCTGTGAGC
TGTGGATGACTGAGAAGGGGAAGTGGCTGGACCAGATGGATATCCCAAACACGCTGGAGGATCT
GGAGGTTGTGCAGCACAGGTTTGACATCCTGGACCAGGAGATGAAGACCTTGATGGCGCAGATT
GATGGCGTGAACCTTGCGGCCAACAACCTGGTAGAGAGCGGCCACCCACGCAGTGGGGAGGTGA
AACAATATCAGGACCGCCTAAACAAGAGGTGGCAGGCCTTCCAGGCAGTGGTGTCAGAGCAGAG
AGAGGCTGTGGACTCGGCTCTCCGAGTAAACAATTACTGTGTAGACTGTGAGGAAACCAGCAAG
TGGATCGTGGACAAGACGAAGGTTGTGGAGTCTACCAAGGACTTGGGGCAGGACCTAGCAGGAG
TCATTGCCATCCAGCGGAAGTTGTCAGGGTTGGAGCGGGACGTATTGGCCATCCGGGATCGTGT
GAGCGCCTTGGAACGGGAGTCGCAGTACTTGATGGAGTCACACCCTGACCAGAAAGAGGACATT
GGCCAGCGGCAAGCAGATGTCGAGAAGATGTGGAAGGGCCTGCAAGATGCCTTGCAAGGTCAGG
AGCTCTCCTTAGGTGAGGCCAGCAAGCTGCAGGCTTTCCTACAAGACCTGGATGACTTCAAGGC
CTGGCTGTCGATGGCCCAAAAGGCAGTGGCCTCTGAGGACATGCCTGAGTCACTCCCAGAGGCT
GAGCAACTCCTACAGCAGCATGCAGCCATTAAAGAGGAGATTGATGCTCACAAAGACGATTACC
ACCGGGTCAAGGCCTCTGGGGAAAAAGTGATCGAAGGTCAAACTGACCCAGATTACCAGCTTCT
GGGCCAGCGACTGGAGGGTCTAGATACTGACTGGGATGCTCTGTGGCGGATGTGGGAGAGCCGA
GGGAACACCCTCACCCAGTGCCTGGGCTTCCAGGAGTTCCAGAAAGATGCCAAGCAGGCTGAAG
CCATCCTCAGCAACCAGGAATACACTCTGGCTCACCTGGAGCCCCCAGACTCCCTAGCAGCTGC
AGAGGCCGGCATCCGAAAGTTTGAGGATTTCTTAGTGTCTATGGAAAACAACCGAGATAAAGTC
CTGAGTCCTGTGGACTCCGGAAACATGCTGGTGTCTGAGGGCAACCTGTACTCGAACAAGATCA
AAGAGAAGGTGCAGCTGATTGAAGACAGGCACATGAAGAACAATGAGAAAGCCCAGGAGGTTAC
AGCTCTACTGAAAGACAACCTGGAGTTGCAGAACTTCCTCCAGAACTGCAAGGAGCTCACTCTC
TGGATCAATGACAAGCTGCTGACGTCTCCAGACATCTCCTATGACGAAGCCCGCAACCTTCACA
ACAAATGGATGAAACACCAGGCATTTATGGCAGAGCTGGCTTCACACCAAGGGTGGCTTGAGAA
CATCGTCGCGGAGGGAAGGCAGCTGATGGCAGAGAAGCCCCAGTTCACGGATGTGGTGTCAGAA
AGGCTGGAAGCCCTGCACAAGCTCTGGGATGAGCTGCAGACCACCACAAAGGCGAAGACGGAGC
AACTCTCTGCTGCCCGGAGCTCTGACCTGCGCTTGCAAACCCACGCCGACCTTAGCAAATGGAT
CAGCGCCATGGAGGACCAGCTGCGATCCGACGACCTGGGCAAGGATCTGACCACTGTCAACCGG
ATGTTGGTTAAGTTGAAGCGAGTGGAGGAACAAGTGAATTTGCGGAAGGAGGAGCTGGAGGAAC
TCTTTGCAGAGGCACCCCCACTGGGAGCAGAGGCAGGAGACACGGACATGAGCATTGAAAAGCG
GTTCCTAGACCTTCTAGAACCTCTGGGGAGGAGGAAGAAGCAGCTGGAATTATCCAAAGCCAAG
CTACAGATCAGCCGGGACTTAGAGGATGAGACGCTCTGGGTGGAAGAGAGGCTGCCGTTGGCGC
AGTCAGCTGACTATGGCACTAATCTGCAAACAGTGCAGCTGTTCATGAAGAAGAACCAGACCCT
GCAGAATGAGATCCTAGGCCACGCACCACGGGTGGAGGATGTGCTACATCGAGGGCAGGAGCTG
GTGAAGGCAGCCGAGATCGACTGCCAAGACATCGAGGAGCGCTTGGGGCATCTGCAGAGCTCGT
GGGACACGCTGCGGGAGGCGGCAGCTGGCCGGCTGCAGCGCCTGCGGGAAGCTCACGAGGCACA
GCAGTACTACCTGGATGCGGGCGAGGCTGAAGCGTGGATCAGCGAGCAGGAGCTCTACGTGTTC
TCTGACGAACCCCCTAAGGACGAAGAGGGCGCCATCGTGATGCTCAAGCGGCACCTTCGGCAGC
AGCGCACGGTGGAGGAATATGGAAGGAATATCAAACAGCTGGCTGGCCGCGCCCAGAGCCTGCT
GTCTGCAGGCCACCCGGAGGGGGAGCAGATCATCAGACTTCAGGGGCAAGTGGATAAGCAGTAT
GCCGGGCTGAAGGACATGGCTGAGGAACGGAGGCGGAAGCTAGAGAACATGTACCACCTGTTCC
AGCTGAAGAGAGAGGCTGACGACTTGGAGCAGTGGATTACGGAGAAAGAGATGGTGGCCTCATC
CCAAGAAATGGGGCAGGACTTTGACCACGTGACTATGCTCCGTGACAAGTTCCGAGACTTTGCC
CGGGAGACCGGGGCTATCGGGCAGGAGCGAGTAGACAATGTGAATTCTATCATTGAGCGTCTCA
TCGATGCGGGCCACAGCGAGGCAGCCACCATTGCAGAGTGGAAGGATGGGCTGAATGACATGTG
GGCAGATCTGCTGGAGCTCATTGACACCCGCATGCAGCTGCTGGCTGCCTCCTACGACCTGCAC
CGCTATTTCTACACGGGCACCGAGATCCTGGGCCTCATAGATGAGAAGCACAGAGAGTTGCCAG
AGGACGTGGGGCTGGACGCCAGCACAGCTGAGTCCTTCCACCGGGTCCACACTGCCTTCGAGCG
GGAGCTCCACCTCCTGGGTGTGCAGGTGCAGCAGTTCCAGGACGTGGCCACCCGACTGCAGACA
GCGTATGCTGGGGAGAAGGCAGATGCTATCCAGAGCAAGGAGCAGGAGGTGTCCGCGGCCTGGC
AGGCCCTGCTGGACGCGTGTGCTGGGCGCCGAGCTCAGCTGGTAGATACGGCAGACAAGTTCCG
CTTCTTCAGCATGGTGCGTGACCTCCTCTCCTGGATGGAGAGCATCATCCGGCAGATCGAGACC
CAGGAGAGACCCAGGGATGTCTCCTCGGTGGAACTGCTCTTGAAGTATCACCAGGGCATCAAGG
CAGAGATCAATACCAGGGCCAAGAACTTCAGCACCTGCCTAGAACTTGGGGAGTCCCTGCTACA
GAGGCAACACCAGGCTTCAGACGAGATCCGGGAGAAATTACAGCAAGTGATATCCAGGAGGCAG
GAGATGAATGACAAGTGGGAAGCCCGCTCTGACAGGCTCCACATGCTGCTGGAGGTGTGCCAGT
TCTCGAGGGACGCTTCTGTGGCCGAGGCATGGCTGATTGCCCAGGAGCCCTACCTGGCCAGCCG
GGACTTTGGACATACGGTGGACAGCGTGGAAAAGCTCATCAAGAGGCATGAGGCTTTTGAGAAG
TCCACAGCCAGCTGGGCAGAGCGCTTTGCTGCCCTGGAGAAGCCCACCACGCTTGAGCTTAAGG
AACGCCAGACTCCAGACAGACCCACAGAGGAACCTGGGCCTCAAGAGGAGGAAGGCGAGACAGC
TGGCGAGGCTCCCCAGGTCCACCATGCGGCCACGGAGAGAACATCCCCGGGGGAAGAAAGAGGG
CCATGGCCTCAGGACCTGCAACCACCACCCCTGCCAGGACACCACAAGGATGAGCAGGAGAAAT
CCGTTGGGGATGAGAGGCCTGCCACAGAGCCCCTCTTTAAGGTCCTGGACACACCCCTGAGTGA
GGGTGACGAACCCACAACGCTGCCAGCCCAGCGAGACCTCGGGCATACTGTGCAGATGGAGGGC
TACTTGGGCAGAAAGCACGACCTAGAGGGGCCCAACAAGAAGGCCTCTAACAGGTCCTGGAACA
ACCTGTACTGTGTGCTCAGGAACAGCCAGCTGACCTTCTACAAGGACGCTAAGAACCTGGCCCT
CGGGGTGCCCTACCATGGAGAGGAGCCCCTGGCCCTGAGGCACGCCATCTGTGAGATTGCTGTC
AACTATAAGAAGAAGAAGCATGTGTTTAAGCTGAGGTTAAGCAACGGCAGTGAATGGCTTTTCC
ATGGCAAGGATGAGGAGGAGATGCTGTTGTGGCTACAGGGCATGAGCACGGCCATCAACGAGTC
CCAGAGCATCCGTGTCAAGGCACAGAGTCTGCCCCTGCCTTCCCTGGCTGGTCCTGATGCCAGC
GTAGGCAAGAAGGACAAGGAGAAGAGGTTTAGCTTCTTCCCCAAAAAGAAGTAGCAGCTGGGGG
CCCCCATGGGCGGGGCCAGCCAGGCAGCACTGCAGTGTGCACTGGGACATGCAAGGACAAGGAG
CCCATGGCCTCGACCTCTGCAGTGGCCAGTCCTCCTCCCGCCTGCCACTCACTGCCTGCAGCCT
GCCTGCTCAAGTTGCTGGGCCAGCCCCAGGGCCCCACACTGCACTGCAATAGCTGCCTTGCCTG
CCTGGCCTCCCTGGTCTTCCCAATGCCTGCCAACAGCCCTCCACCCCTCCTACCCCATGCAGCT
GGCTGGGCTCCAGGGACTGGAGGTCCAGCTCCTTTGGGGCTGGAAAAGAGTGTAAGGCATATAC
TCTCCTCTTCCTGCCTACAGGCTGGGATGCCTGATGGGTTCCCTCCAGCACTGCCCACTACCAC
AGCAAATCCCCTTTGGGGTCACTGACCATAGTCAGCCAGGGAAAGGAAAATGAATATGATGATA
GTTGCCCTGTTCCTTAGGGGCGGGAGGAAGGGCCTTCAGAACCAGCTCTGGGCAAGGGGCTGGT
GGGGTACCAAGGGGACAATACGGATGTCAAGCTGTGAGTACTGCCAGTCTCCTCCCCGCTGGGC
TCCTTCAGCAACAGGACTCTCTCCTCAGGGCTAGTACGTCCCTTCTTTCCTCTTCTCACACCCC
TAAGAGTTTTGGTGAGTCCCGAGTGAATGAGCCTCCTCCTTCCAATGACACCCTTTAATCCTGG
CATCAACAGTGTTAGGGCCAGAAGCCCTCACACCACTCTCTTGGAAACCCTGGTACCACTTAGG
GTTCAGACCTCTGTCACAGGAGGGACAGACAGGTCCACACTTCTGAAGCCTCTGCCTATAGTGC
AGCTCTTTCTCCCATTCCCAGTTGCAGCCAAACCAACAGCGCGTGGTGAGGGCTGGCGCCAGAG
ACAAGCTGCATACCCAGATCCTACAGTCAAGTATCTCAAAGCTACACGCCCTCCTATAATCCGC
TGCCCTGGCAGCTAGCACCAGCCAGGCCAGTGGCTGGACACAGCTGTTTATTACCTAGGGGTGA
CAAATGTAGGCTTGTGACAGTTACCCCTGGAACATAGGGATGCGTGTTGAGGTTATTTTGTGAA
GGTATGGCTCTTCTTGGTTGGTTTCTGCAGACCTAGATTTTGGGGTCGCCTGGTATAGAGATCA
CCAAGCATCAAAAGGGGCTCTGCAGCCTGTCCCTGGGGTGCTTTCCCATGCCCGTGGAAGACTA
AGACCACTGGTCCTACAGACATGCTCTGCTTCACAACTGGAAGCAACACAGCTTCAGCCCAACA
TGGCAGCTGGAGTTAGGTCCAAAAGATGGTTGAGGTGAGGGCAAGGGGCCTTTTCACCCAGGAG
ACCATCTGTGTTCCTAGGGCCCACAGCCAGTTTCTACTGCCTTCCCCATGGGTAAGGCTCAATG
GTAGGCATACAGTTACTAGGCCTTCCCAGAATCCCTTACTGTTGACCAGGCAGGTATAGCTCAG
AGATCAGTTGCACCCGGTGACCCCCCCAACATGACCTGAGTATGAACTCAACTCCAGTGGATGA
CAACCCCCTTCGCCAGTGGGGCCTGATTTCTTCATCTCCACAGCCGGTCTGAAACTTGGCCTCA
GGGTATAGGACCCTGTAACTCTCTCCTACAGGGAACACAGTGGGCACCACTCATCAGCCTCTTT
GTACAGCTGGAGAAACCAAAGCGGTAGACAGGGAGGCATCTGCACCCCTGACAATAAGAATGGC
CTTGGTACACCGAAAGGCATGTCTATCTCTGGGACAGGAAGTGGGCTCCTCGATGAAGCATTAG
GTGGCAAGCAACTCCCTCAGGCACTTTCCCTGGCCTAGTCTTTGGGGGACCAAAGGATGAGGGT
CTACATTTCCCTTCTACATGTACCCAAGTAGCGCCTGAAGTGAGACTTTTCCAGTAACTCCACA
GAGCCAAGACAGAAAAAAGGCTCTAGTGGAAGAGCTAGGATTTCACTGCAAAGGATTATTCAAG
GGTAGTAAGCTACAAGTGACCTACCATCACAGCCAGATCCCCACACTTCTCACCAGTCACCCAG
GCCCCAAGGCCCTCAACATACTGGACTGACTTCGCGGGAACTCTGTGCACTCCAGGGCCAGGCT
CTCCTGATGCCCTGGCAAGGCTGGCTTTTCTCCTGGTATTTTCTACTTTGCAGTCTTCCCTGAC
AGTATTCCCAAAGTGGGTTAACACAGCTCCAGTCCACACCAGCATAACAGGCTTCCTCCCCGGG
CGGTTGGAGGAAGCTCTCTGGGCACAGCCAGGCAGCTCTCCTTCCCTCCCCATTGCCTTTGTCC
TGGGCCTGGGCAGGCAGGCTGAAGAGGTGCAGCGGTTCCTGGGACCCTCCCACCCCACCTCTAC
TGGTACTAACAGAAGTCTGTGTAGGCTCGGCTCCCTTCCCTTCCCCATCTTCTCCTTCCTGCCT
ACTGGAGGGCAACAGGTCCCCTAAGCTGGTTCTGGATCTCCTTCCTCCATCAACAAGATACCAG
CAGGCTGCACAGCTTGGTCCCTTGGACAAGCAAGCTCAGGGAGGGCACAAGGTGAAATGAAGGT
AGAGAAATGAAACCCCGTTGGGCAGAGATCATGCCATCTGGGGCTGGCTGGGCCTTGTCCTCCA
CCCGCTCAAATGTGCTTCCACCAACCAGAGGAATCCCATTTACTAGTTTTTCTAATAAATCAAT
AATACTCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001420901	(Get FASTA)	NCBI Sequence Viewer
	NP_997687	(Get FASTA)	NCBI Sequence Viewer
	XP_006240306	(Get FASTA)	NCBI Sequence Viewer
	XP_017449631	(Get FASTA)	NCBI Sequence Viewer
	XP_017449632	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAQ02379	(Get FASTA)	NCBI Sequence Viewer
	EDM03669	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009028
	ENSRNOP00000009028.9
	ENSRNOP00000082576.1
	ENSRNOP00000097655
	ENSRNOP00000097655.1
	ENSRNOP00000100926.1

RefSeq Acc Id:

NP_997687 ⟸ NM_212522

- UniProtKB:

Q6XDA0 (UniProtKB/TrEMBL), F1MAL3 (UniProtKB/TrEMBL), A0A140UHX6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTSATEFENVGNQPPYSRINARWDAPDDELDNDSSSARLFERSRIKALADEREVVQKKTFTKWV
NSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKALQFLKEQRV
HLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPQ
VNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDV
FTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQ
TISVLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPH
DGKLVSDINRAWESLEEAEYQRELALRSELIRQEKLEQLARRFDRKAAMRETWLNENQRLVTQD
NFGYDLAAVEAAKKKHEAIETDTAAYEERVKALEDLAQELEKENYHDQKRISARKNNILRLWSY
LQELLRSRRQRLEATLALQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEAD
IAIQGDKVKTITAATLQFTEGKGYQPCDPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLW
KFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEAEDMV
AQKQFGHPQIETRVKEVSAQWDHLKELAAFRKKDLQDAENFFQFQGDADDLKAWLQDAHRLLSG
EDVGQDEGATRALGKKHKEFLEELEESRGVMEHLENQAQGFPEEFRDSPDVTNRLQALRKLYQQ
VMAQAELRGHKLQEALDLYTVFGESDACELWMTEKGKWLDQMDIPNTLEDLEVVQHRFDILDQE
MKTLMAQIDGVNLAANNLVESGHPRSGEVKQYQDRLNKRWQAFQAVVSEQREAVDSALRVNNYC
VDCEETSKWIVDKTKVVESTKDLGQDLAGVIAIQRKLSGLERDVLAIRDRVSALERESQYLMES
HPDQKEDIGQRQADVEKMWKGLQDALQGQELSLGEASKLQAFLQDLDDFKAWLSMAQKAVASED
MPESLPEAEQLLQQHAAIKEEIDAHKDDYHRVKASGEKVIEGQTDPDYQLLGQRLEGLDTDWDA
LWRMWESRGNTLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLAAAEAGIRKFEDFLVS
MENNRDKVLSPVDSGNMLVSEGNLYSNKIKEKVQLIEDRHMKNNEKAQEVTALLKDNLELQNFL
QNCKELTLWINDKLLTSPDISYDEARNLHNKWMKHQAFMAELASHQGWLENIVAEGRQLMAEKP
QFTDVVSERLEALHKLWDELQTTTKAKTEQLSAARSSDLRLQTHADLSKWISAMEDQLRSDDLG
KDLTTVNRMLVKLKRVEEQVNLRKEELEELFAEAPPLGAEAGDTDMSIEKRFLDLLEPLGRRKK
QLELSKAKLQISRDLEDETLWVEERLPLAQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVED
VLHRGQELVKAAEIDCQDIEERLGHLQSSWDTLREAAAGRLQRLREAHEAQQYYLDAGEAEAWI
SEQELYVFSDEPPKDEEGAIVMLKRHLRQQRTVEEYGRNIKQLAGRAQSLLSAGHPEGEQIIRL
QGQVDKQYAGLKDMAEERRRKLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTML
RDKFRDFARETGAIGQERVDNVNSIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQL
LAASYDLHRYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQ
DVATRLQTAYAGEKADAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWME
SIIRQIETQERPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKL
QQVISRRQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLI
KRHEAFEKSTASWAERFAALEKPTTLELKERQTPDRPTEEPGPQEEEGETAGEAPQVHHAATER
TSPVSFMSRLSSSWESLLPEPAHPF

hide sequence

RefSeq Acc Id:

XP_006240306 ⟸ XM_006240244

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTSATEFENVGNQPPYSRINARWDAPDDELDNDSSSARLFERSRIKALADEREVVQKKTFTKWV
NSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKALQFLKEQRV
HLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPQ
VNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDV
FTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQ
TISVLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPH
DGKLVSDINRAWESLEEAEYQRELALRSELIRQEKLEQLARRFDRKAAMRETWLNENQRLVTQD
NFGYDLAAVEAAKKKHEAIETDTAAYEERVKALEDLAQELEKENYHDQKRISARKNNILRLWSY
LQELLRSRRQRLEATLALQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEAD
IAIQGDKVKTITAATLQFTEGKGYQPCDPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLW
KFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEAEDMV
AQKQFGHPQIETRVKEVSAQWDHLKELAAFRKKDLQDAENFFQFQGDADDLKAWLQDAHRLLSG
EDVGQDEGATRALGKKHKEFLEELEESRGVMEHLENQAQGFPEEFRDSPDVTNRLQALRKLYQQ
VMAQAELRGHKLQEALDLYTVFGESDACELWMTEKGKWLDQMDIPNTLEDLEVVQHRFDILDQE
MKTLMAQIDGVNLAANNLVESGHPRSGEVKQYQDRLNKRWQAFQAVVSEQREAVDSALRVNNYC
VDCEETSKWIVDKTKVVESTKDLGQDLAGVIAIQRKLSGLERDVLAIRDRVSALERESQYLMES
HPDQKEDIGQRQADVEKMWKGLQDALQGQELSLGEASKLQAFLQDLDDFKAWLSMAQKAVASED
MPESLPEAEQLLQQHAAIKEEIDAHKDDYHRVKASGEKVIEGQTDPDYQLLGQRLEGLDTDWDA
LWRMWESRGNTLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLAAAEAGIRKFEDFLVS
MENNRDKVLSPVDSGNMLVSEGNLYSNKIKEKVQLIEDRHMKNNEKAQEVTALLKDNLELQNFL
QNCKELTLWINDKLLTSPDISYDEARNLHNKWMKHQAFMAELASHQGWLENIVAEGRQLMAEKP
QFTDVVSERLEALHKLWDELQTTTKAKTEQLSAARSSDLRLQTHADLSKWISAMEDQLRSDDLG
KDLTTVNRMLVKLKRVEEQVNLRKEELEELFAEAPPLGAEAGDTDMSIEKRFLDLLEPLGRRKK
QLELSKAKLQISRDLEDETLWVEERLPLAQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVED
VLHRGQELVKAAEIDCQDIEERLGHLQSSWDTLREAAAGRLQRLREAHEAQQYYLDAGEAEAWI
SEQELYVFSDEPPKDEEGAIVMLKRHLRQQRTVEEYGRNIKQLAGRAQSLLSAGHPEGEQIIRL
QGQVDKQYAGLKDMAEERRRKLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTML
RDKFRDFARETGAIGQERVDNVNSIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQL
LAASYDLHRYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQ
DVATRLQTAYAGEKADAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWME
SIIRQIETQERPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKL
QQVISRRQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLI
KRHEAFEKSTASWAERFAALEKPTTLELKERQTPDRPTEEPGPQEEEGETAGEAPQVHHAATER
TSPGEERGPWPQDLQPPPLPGHHKDEQEKSVGDERPATEPLFKVLDTPLSEGDEPTTLPAQRDL
GHTVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYKDAKNLALGVPYHGEEPLALR
HAICEIAVNYKKKKHVFKLRLSNGSEWLFHGKDEEEMLLWLQGMSTAINESQSIRVKAQSLPLP
SLAGPDASVGKKDKEKRFSFFPKKK

hide sequence

RefSeq Acc Id:	XP_017449632 ⟸ XM_017594143
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AWM3 (UniProtKB/TrEMBL), A0A8I6G9M6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSATEFENVGNQPPYSRINARWDAPDDELDNDSSSARLFERSRIKALADEREVVQKKTFTKWV NSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKALQFLKEQRV HLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPQ VNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDV FTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQ TISVLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPH DGKLVSDINRAWESLEEAEYQRELALRSELIRQEKLEQLARRFDRKAAMRETWLNENQRLVTQD NFGYDLAAVEAAKKKHEAIETDTAAYEERVKALEDLAQELEKENYHDQKRISARKNNILRLWSY LQELLRSRRQRLEATLALQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEAD IAIQGDKVKTITAATLQFTEGKGYQPCDPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLW KFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEAEDMV AQKQFGHPQIETRVKEVSAQWDHLKELAAFRKKDLQDAENFFQFQGDADDLKAWLQDAHRLLSG EDVGQDEGATRALGKKHKEFLEELEESRGVMEHLENQAQGFPEEFRDSPDVTNRLQALRKLYQQ VMAQAELRGHKLQEALDLYTVFGESDACELWMTEKGKWLDQMDIPNTLEDLEVVQHRFDILDQE MKTLMAQIDGVNLAANNLVESGHPRSGEVKQYQDRLNKRWQAFQAVVSEQREAVDSALRVNNYC VDCEETSKWIVDKTKVVESTKDLGQDLAGVIAIQRKLSGLERDVLAIRDRVSALERESQYLMES HPDQKEDIGQRQADVEKMWKGLQDALQGQELSLGEASKLQAFLQDLDDFKAWLSMAQKAVASED MPESLPEAEQLLQQHAAIKEEIDAHKDDYHRVKASGEKVIEGQTDPDYQLLGQRLEGLDTDWDA LWRMWESRGNTLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLAAAEAGIRKFEDFLVS MENNRDKVLSPVDSGNMLVSEGNLYSNKIKEKVQLIEDRHMKNNEKAQEVTALLKDNLELQNFL QNCKELTLWINDKLLTSPDISYDEARNLHNKWMKHQAFMAELASHQGWLENIVAEGRQLMAEKP QFTDVVSERLEALHKLWDELQTTTKAKTEQLSAARSSDLRLQTHADLSKWISAMEDQLRSDDLG KDLTTVNRMLVKLKRVEEQVNLRKEELEELFAEAPPLGAEAGDTDMSIEKRFLDLLEPLGRRKK QLELSKAKLQISRDLEDETLWVEERLPLAQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVED VLHRGQELVKAAEIDCQDIEERLGHLQSSWDTLREAAAGRLQRLREAHEAQQYYLDAGEAEAWI SEQELYVFSDEPPKDEEGAIVMLKRHLRQQRTVEEYGRNIKQLAGRAQSLLSAGHPEGEQIIRL QGQVDKQYAGLKDMAEERRRKLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTML RDKFRDFARETGAIGQERVDNVNSIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQL LAASYDLHRYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQ DVATRLQTAYAGEKADAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWME SIIRQIETQERPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKL QQVISRRQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLI KRHEAFEKSTASWAERFAALEKPTTLELKERQTPDRPTEEPGPQEEEGETAGEAPQVHHAATER TSPGEERGPWPQDLQPPPLPGHHKDEQEKSVGDERPATEPLFKVLDTPLSEGDEPTTLPAQRDL GHTVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYKDAKNLALGVPYHGEEPLALR HAICEIAVNYKKKKHVFKLRLSNGSEWLFHGKDEEEMLLWLQGMSTAINESQSIRVKAQSLPLP SLAGPDASVGKKDKEKRFSFFPKKK hide sequence

RefSeq Acc Id:	XP_017449631 ⟸ XM_017594142
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AWM3 (UniProtKB/TrEMBL), A0A8I6G9M6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSATEFENVGNQPPYSRINARWDAPDDELDNDSSSARLFERSRIKALADEREVVQKKTFTKWV NSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKALQFLKEQRV HLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALLLWCQMKTAGYPQ VNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDVAERQLGIIPLLDPEDV FTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIETEKMIEKYSGLASDLLTWIEQ TISVLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKGNLEVLLFTIQSRMRANNQKVYTPH DGKLVSDINRAWESLEEAEYQRELALRSELIRQEKLEQLARRFDRKAAMRETWLNENQRLVTQD NFGYDLAAVEAAKKKHEAIETDTAAYEERVKALEDLAQELEKENYHDQKRISARKNNILRLWSY LQELLRSRRQRLEATLALQKLFQDMLHSIDWMDEIKAHILSAEFGKHLLEVEDLLQKHKLMEAD IAIQGDKVKTITAATLQFTEGKGYQPCDPQVIQDRVSHLEQCFSELSNMAAGRKAQLEQSKRLW KFFWEMDEAESWIKEKEQIYSSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEAEDMV AQKQFGHPQIETRVKEVSAQWDHLKELAAFRKKDLQDAENFFQFQGDADDLKAWLQDAHRLLSG EDVGQDEGATRALGKKHKEFLEELEESRGVMEHLENQAQGFPEEFRDSPDVTNRLQALRKLYQQ VMAQAELRGHKLQEALDLYTVFGESDACELWMTEKGKWLDQMDIPNTLEDLEVVQHRFDILDQE MKTLMAQIDGVNLAANNLVESGHPRSGEVKQYQDRLNKRWQAFQAVVSEQREAVDSALRVNNYC VDCEETSKWIVDKTKVVESTKDLGQDLAGVIAIQRKLSGLERDVLAIRDRVSALERESQYLMES HPDQKEDIGQRQADVEKMWKGLQDALQGQELSLGEASKLQAFLQDLDDFKAWLSMAQKAVASED MPESLPEAEQLLQQHAAIKEEIDAHKDDYHRVKASGEKVIEGQTDPDYQLLGQRLEGLDTDWDA LWRMWESRGNTLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLAAAEAGIRKFEDFLVS MENNRDKVLSPVDSGNMLVSEGNLYSNKIKEKVQLIEDRHMKNNEKAQEVTALLKDNLELQNFL QNCKELTLWINDKLLTSPDISYDEARNLHNKWMKHQAFMAELASHQGWLENIVAEGRQLMAEKP QFTDVVSERLEALHKLWDELQTTTKAKTEQLSAARSSDLRLQTHADLSKWISAMEDQLRSDDLG KDLTTVNRMLVKLKRVEEQVNLRKEELEELFAEAPPLGAEAGDTDMSIEKRFLDLLEPLGRRKK QLELSKAKLQISRDLEDETLWVEERLPLAQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVED VLHRGQELVKAAEIDCQDIEERLGHLQSSWDTLREAAAGRLQRLREAHEAQQYYLDAGEAEAWI SEQELYVFSDEPPKDEEGAIVMLKRHLRQQRTVEEYGRNIKQLAGRAQSLLSAGHPEGEQIIRL QGQVDKQYAGLKDMAEERRRKLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTML RDKFRDFARETGAIGQERVDNVNSIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQL LAASYDLHRYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQ DVATRLQTAYAGEKADAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWME SIIRQIETQERPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASDEIREKL QQVISRRQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHTVDSVEKLI KRHEAFEKSTASWAERFAALEKPTTLELKERQTPDRPTEEPGPQEEEGETAGEAPQVHHAATER TSPGEERGPWPQDLQPPPLPGHHKDEQEKSVGDERPATEPLFKVLDTPLSEGDEPTTLPAQRDL GHTVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYKDAKNLALGVPYHGEEPLALR HAICEIAVNYKKKKHVFKLRLSNGSEWLFHGKDEEEMLLWLQGMSTAINESQSIRVKAQSLPLP SLAGPDASVGKKDKEKRFSFFPKKK hide sequence

Ensembl Acc Id:

ENSRNOP00000009028 ⟸ ENSRNOT00000009028

Ensembl Acc Id:

ENSRNOP00000097655 ⟸ ENSRNOT00000094264

Ensembl Acc Id:

ENSRNOP00000082576 ⟸ ENSRNOT00000112302

Ensembl Acc Id:

ENSRNOP00000100926 ⟸ ENSRNOT00000162320

Protein Domains

Calponin-homology (CH) PH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A140UHX6-F1-model_v2	AlphaFold	A0A140UHX6	1-2329	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694678

Promoter ID:

EPDNEW_R5203

Type:

initiation region

Name:

Sptb_1

Description:

spectrin, beta, erythrocytic

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	99,783,084 - 99,783,144	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303243	AgrOrtholog
BioCyc Gene	G2FUF-37051	BioCyc
Ensembl Genes	ENSRNOG00000006911	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009028	ENTREZGENE
	ENSRNOT00000009028.9	UniProtKB/TrEMBL
	ENSRNOT00000094264	ENTREZGENE
	ENSRNOT00000094264.2	UniProtKB/TrEMBL
	ENSRNOT00000112302.2	UniProtKB/TrEMBL
	ENSRNOT00000162320.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.418.10	UniProtKB/TrEMBL
	1.20.58.60	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	Actinin_actin-bd_CS	UniProtKB/TrEMBL
	Calponin-like_dom_sf	UniProtKB/TrEMBL
	CH-domain	UniProtKB/TrEMBL
	PH_9	UniProtKB/TrEMBL
	PH_dom-like	UniProtKB/TrEMBL
	PH_dom-spectrin-type	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
	Spectrin/alpha-actinin	UniProtKB/TrEMBL
	Spectrin_bsu	UniProtKB/TrEMBL
	Spectrin_repeat	UniProtKB/TrEMBL
KEGG Report	rno:314251	UniProtKB/TrEMBL
NCBI Gene	314251	ENTREZGENE
PANTHER	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	UniProtKB/TrEMBL
Pfam	PF00307	UniProtKB/TrEMBL
	PH_9	UniProtKB/TrEMBL
	Spectrin	UniProtKB/TrEMBL
PhenoGen	Sptb	PhenoGen
PIRSF	Spectrin_beta_subunit	UniProtKB/TrEMBL
PRINTS	SPECTRINPH	UniProtKB/TrEMBL
PROSITE	ACTININ_1	UniProtKB/TrEMBL
	ACTININ_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
	PS50021	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000006911	RatGTEx
SMART	SM00033	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
	SPEC	UniProtKB/TrEMBL
Superfamily-SCOP	Calponin-homology	UniProtKB/TrEMBL
	PH domain-like	UniProtKB/TrEMBL
	Spectrin repeat	UniProtKB/TrEMBL
UniProt	A0A140UHX6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AWM3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G9M6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LC83_RAT	UniProtKB/TrEMBL
	F1MAL3	ENTREZGENE
	Q6XDA0	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F1MAL3	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Sptb	spectrin, beta, erythrocytic	LOC679700	hypothetical protein LOC679700	Data merged from RGD:1584841	737654	PROVISIONAL
2008-09-18	Sptb	spectrin, beta, erythrocytic	Spnb1	spectrin beta 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-13	Spnb1	spectrin beta 1	LOC314251	erythroid spectrin beta	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-01-09	LOC679700	hypothetical protein LOC679700	LOC687997	hypothetical protein LOC687997	Data merged from RGD:1594855	1643240	APPROVED
2006-11-20	LOC687997	hypothetical protein LOC687997			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC679700	hypothetical protein LOC679700			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-10-12	LOC314251				Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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