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Gene: Phactr2 (phosphatase and actin regulator 2) Rattus norvegicus

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Symbol:

Phactr2

Name:

phosphatase and actin regulator 2

RGD ID:

1303141

Description:

Predicted to enable actin binding activity. Predicted to be involved in actin cytoskeleton organization. Human ortholog(s) of this gene implicated in Parkinson's disease and multiple sclerosis. Orthologous to human PHACTR2 (phosphatase and actin regulator 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PHACTR2 (phosphatase and actin regulator 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Phactr2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Phactr2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PHACTR2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PHACTR2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Phactr2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PHACTR2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PHACTR2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Phactr2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Phactr2 (phosphatase and actin regulator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PHACTR2 (phosphatase and actin regulator 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Phactr2 (phosphatase and actin regulator 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phactr2 (phosphatase and actin regulator 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phactr2 (phosphatase and actin regulator 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	BNI4	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	F26H9.2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F26H9.2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG32264	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG32264	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	phactr2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	phactr2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	9,411,412 - 9,680,648 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl				GRCr8
mRatBN7.2	1	7,591,254 - 7,860,431 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	7,597,927 - 7,860,289 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	7,294,367 - 7,406,903 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	13,293,490 - 13,406,030 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	7,576,655 - 7,689,192 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	7,352,050 - 7,633,991 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	7,355,154 - 7,480,825 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	8,990,542 - 9,040,039 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	7,988,527 - 8,102,667 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	6,086,830 - 6,198,133 (-)	NCBI		Celera
RGSC_v3.1	1	7,988,526 - 8,102,667 (-)	NCBI
Cytogenetic Map	1	p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

COVID-19 (ISO)

multiple sclerosis (ISO)

Parkinson's disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

5-azacytidine (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

cobalt dichloride (ISO)

coumestrol (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

cytarabine (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dioxygen (ISO)

diuron (EXP)

dorsomorphin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

Enterolactone (ISO)

ethanol (ISO)

FR900359 (ISO)

geldanamycin (ISO)

glycidol (EXP)

lead diacetate (ISO)

leflunomide (ISO)

methotrexate (ISO)

methylmercury chloride (ISO)

paracetamol (EXP,ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

quercetin (ISO)

SB 431542 (ISO)

selenium atom (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IBA)

Molecular Function

actin binding (IBA,IEA)

protein binding (ISO)

protein phosphatase inhibitor activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phactrs 1-4: A family of protein phosphatase 1 and actin regulatory proteins.	Allen PB, etal., Proc Natl Acad Sci U S A 2004 May 4;101(18):7187-92. Epub 2004 Apr 23.
2.	Fine mapping of calcineurin (PPP3CA) gene reveals novel alternative splicing patterns, association of 5'UTR trinucleotide repeat with addiction vulnerability, and differential isoform expression in Alzheimer's disease.	Chiocco MJ, etal., Subst Use Misuse. 2010 Sep;45(11):1809-26.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	An application of Random Forests to a genome-wide association dataset: methodological considerations & new findings.	Goldstein BA, etal., BMC Genet. 2010 Jun 14;11:49.
5.	GOA pipeline	RGD automated data pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Phactr2 and Parkinson's disease.	Wider C, etal., Neurosci Lett. 2009 Mar 27;453(1):9-11. Epub 2009 Feb 10.

Genomics

Comparative Map Data

Phactr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	9,411,412 - 9,680,648 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl				GRCr8
mRatBN7.2	1	7,591,254 - 7,860,431 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	7,597,927 - 7,860,289 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	7,294,367 - 7,406,903 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	13,293,490 - 13,406,030 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	7,576,655 - 7,689,192 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	7,352,050 - 7,633,991 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	7,355,154 - 7,480,825 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	8,990,542 - 9,040,039 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	7,988,527 - 8,102,667 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	6,086,830 - 6,198,133 (-)	NCBI		Celera
RGSC_v3.1	1	7,988,526 - 8,102,667 (-)	NCBI
Cytogenetic Map	1	p13	NCBI

PHACTR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	143,536,878 - 143,831,185 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	143,536,845 - 143,831,185 (+)	Ensembl			hg38	GRCh38
GRCh37	6	143,858,015 - 144,152,322 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	143,971,010 - 144,194,015 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	143,971,092 - 144,188,885	NCBI
Celera	6	144,669,714 - 144,892,732 (+)	NCBI		Celera
Cytogenetic Map	6	q24.2	NCBI
HuRef	6	141,493,526 - 141,716,094 (+)	NCBI		HuRef
CHM1_1	6	144,192,176 - 144,415,204 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	144,729,279 - 145,023,866 (+)	NCBI		T2T-CHM13v2.0

Phactr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	13,083,461 - 13,350,266 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	13,083,461 - 13,350,156 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	13,207,717 - 13,474,525 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	13,207,717 - 13,474,412 (-)	Ensembl			mm10	GRCm38
MGSCv37	10	12,933,201 - 13,043,966 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	12,903,593 - 13,014,358 (-)	NCBI		MGSCv36	mm8
Celera	10	13,112,086 - 13,221,736 (-)	NCBI		Celera
Cytogenetic Map	10	A2	NCBI
cM Map	10	4.72	NCBI

Phactr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	16,619,552 - 16,694,053 (-)	Ensembl
ChiLan1.0	NW_004955436	16,607,279 - 16,690,412 (-)	NCBI	ChiLan1.0	ChiLan1.0

PHACTR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	163,519,164 - 163,812,984 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	161,414,148 - 161,707,468 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	141,312,850 - 141,602,868 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	146,104,638 - 146,323,645 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	146,174,399 - 146,323,625 (+)	Ensembl			panPan2	panpan1.1

PHACTR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	35,158,678 - 35,348,875 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	35,088,248 - 35,342,584 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	36,056,282 - 36,244,938 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	35,340,396 - 35,530,115 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	35,268,891 - 35,524,725 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	35,201,547 - 35,390,556 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	35,084,683 - 35,275,814 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	35,396,810 - 35,586,054 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Phactr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	130,096,980 - 130,292,200 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936625	2,343,821 - 2,538,326 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936625	2,336,455 - 2,474,032 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PHACTR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	21,443,970 - 21,722,922 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	21,438,744 - 21,723,255 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	23,765,368 - 23,938,799 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PHACTR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	29,401,562 - 29,702,719 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	29,401,382 - 29,560,452 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	1,527,693 - 1,840,292 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Phactr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624753	10,456,910 - 10,742,311 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Phactr2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	223,724,461 - 223,983,417 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Phactr2
1562 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	68
Count of miRNA genes:	62
Interacting mature miRNAs:	64
Transcripts:	ENSRNOT00000048754
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313090	Bmd69	Bone mineral density QTL 69	4.4	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	5293229	34184556	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	7746118	52746118	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	7746121	52746121	Rat
70179	Xhs2	X-ray hypersensitivity QTL 2	3.2		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	1	1	43965634	Rat
1354647	Despr8	Despair related QTL 8		0.0000341	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	1	26564886	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	6941022	51941022	Rat
2313070	Bss52	Bone structure and strength QTL 52	4.4	0.0001	body length (VT:0001256)	body length (CMO:0000013)	1	5293229	34184556	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	6909353	51909353	Rat
1600360	Mcs16	Mammary carcinoma susceptibility QTL 16	2.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	1	26564886	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	6909353	51909353	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	6909353	51909353	Rat
2317755	Glom22	Glomerulus QTL 22	3.8		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	1	34184556	Rat
1300170	Rf6	Renal function QTL 6	3.14		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	1	1	28483164	Rat
2313053	Bss51	Bone structure and strength QTL 51	3.8	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	5293229	34184556	Rat

Markers in Region

BI294821

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	7,637,909 - 7,638,059 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	7,395,116 - 7,395,265	NCBI	Rnor6.0
Rnor_5.0	1	9,030,107 - 9,030,256	UniSTS	Rnor5.0
RGSC_v3.4	1	8,029,102 - 8,029,251	UniSTS	RGSC3.4
Celera	1	6,126,805 - 6,126,954	UniSTS
RH 3.4 Map	1	107.8	UniSTS
Cytogenetic Map	1	p13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
19	13	74	201	91	90	59	159	59	6	471	275	21	175	110	107	31	34	34

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001437803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_214458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288660	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY500158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000048754 ⟹ ENSRNOP00000045608

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,520,091 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,597,927 - 7,710,740 (-)	Ensembl
Rnor_6.0 Ensembl	1	7,355,154 - 7,480,825 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088558 ⟹ ENSRNOP00000074696

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,426,870 - 9,497,552 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,606,712 - 7,677,925 (-)	Ensembl
Rnor_6.0 Ensembl	1	7,364,079 - 7,443,863 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095947 ⟹ ENSRNOP00000079024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,597,927 - 7,710,740 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098982 ⟹ ENSRNOP00000091111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,596,369 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,597,927 - 7,646,349 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103115 ⟹ ENSRNOP00000081639

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,606,712 - 7,678,014 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106732 ⟹ ENSRNOP00000092238

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,606,712 - 7,678,014 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114682 ⟹ ENSRNOP00000087602

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,597,927 - 7,711,033 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117080 ⟹ ENSRNOP00000090478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,597,927 - 7,860,289 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118029 ⟹ ENSRNOP00000081040

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,531,157 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,597,927 - 7,775,935 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118762 ⟹ ENSRNOP00000079720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	9,418,085 - 9,680,583 (-)	Ensembl
mRatBN7.2 Ensembl	1	7,606,712 - 7,678,014 (-)	Ensembl

RefSeq Acc Id:

NM_214458 ⟹ NP_999623

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,418,085 - 9,530,912 (-)	NCBI
mRatBN7.2	1	7,597,927 - 7,710,740 (-)	NCBI
Rnor_6.0	1	7,355,294 - 7,480,789 (-)	NCBI
Rnor_5.0	1	8,990,542 - 9,040,039 (-)	NCBI
RGSC_v3.4	1	7,988,527 - 8,102,667 (-)	RGD
Celera	1	6,086,830 - 6,198,133 (-)	RGD

Sequence:

show sequence

AACGAGGACCCGCCATGGGCCAGACCTCGGTGTCCGCGCTGTCCCCGCAGCCCGGCAGCGTTGA
TGGACTAGACAAAGCCTCCATAGCAAACTCAGATGGCCCCCCAGCAGGTTCCCAGACACCTCCC
TTCAAGAGAAAGGGGAAACTCTCCACCATTGGTAAAATCTTCAAGCCTTGGAAATGGAGGAAAG
AGAAGACCAGTGACAAGTTTAGAGAGACCTCAGCAGTATTAGAGAGGAAGATATCCACCAGACA
AAGTAGAGAGGAGCTGATAAGAAGGGGCCTGCTTAAGGAATTGCCTGATCAAGATGGAGATGTA
ACAGTTAACTTTGAAAATTCAAACGGGCACATGATACACATCGGAGAGGAAGCTACCCAAGAGG
AGAATGTAGGGAAACCTGAAGAAGGGAATGTCTCTGTGTGTGAGAAAGGACCACCTCGAGAGGA
ACAGGCAGAAGAGAAGACAGCTGGTTCCTCTCACCCGAAGAAAACAACTGGTTCCAAAGCCTCA
TCCTCACCATCTGCTTCGTCCACCTCCTCTCATCCCAGAGGACCCAAGGAGTCACTCACTGGCA
AAGCAGGCGCGGTTGGGACCACAAGGGGCAAGAAAAAGATTAGCAAGCAGCCAGCAGCGGCGGC
ATCCCGACTGTCCCCCAACACAGTCACTTCTGAAACGTCTAGTCTTAAAGGAGAGCTCTCAGAC
ACTGGGGTAGAGAGCCTCAAGCCAGAGGAAACTGTTGCTGGAGCAGAGGAGGAGGCCACAGGCA
AACCCAAGGCGGTCGTCGTCGCTCTGCCACCTGTCACAGTACCGCCATCTTCACCTGCCCTTCC
TCTGCCCCCTGAGGATCCATGCACTATTGCCTTGGACACTCCCATGGTCCTAGTCAGTGATGGA
CCCACCCTGCCCATCTCTGCCTTAGAAACAAGTCCGCTCCCTGGGACTGAAGAACCAGCGAACA
GAACCACTCCGTACTCAAGCACCGGCTTAGGTGGGAGCCGAGAGCAGGCAAAATGTTTTACAAC
CAAAGATGGGCTGGGAAAGGCTGGACCTCAATTGCTGACCCCTGGACAGATGGGAGACTCATTA
GAATCCTTCAGTGCCCCAGAGGATGAGGCCCCAAGAGAGTACCAAGCCAATGACTCTGACTCGG
ATGGACCCATCTTATACACAGATGATGATGATGAAGAAGATGATGATGATGACAGCACTGGAGA
AAGTGCATTGGCAAGTAAGATCAGACGAAGGGATACACTCGCCATCAAACTTGGCAACAGACCA
TCCAAGAAAGAGCTAGAGGACAAAAACATCCTGCAGCGAACGTCTGAAGAAGAAAGGCAGGAGC
TGCGACAACAGATAGGAACCAAGCTGGTCAGGAGACTCAGCCAGAGGCCAACCACTGAAGAATT
AGAGCAGAGAAGCATCTTAAAACAAAAGAATGAAGAAGAGGAGCAGGAAGCAAAAATGGAACTC
AAACGGAGGCTCAGCCGGAAGCTCAGCCTAAGACCTACTGTGCCAGAGCTACAAGCCCGAAGAA
TCCTGCGGTTTAATGAGTATGTGGAAGTCACAGATTCCCCGGACTACGACAGACGTGCGGACAA
GCCCTGGGCCAGGTTGACACCTGCGGACAAGGCAGCAATAAGGAAAGAACTAAATGAATTTAAA
AGCACGGAAATGGAAGTTCACGAAGAGAGTCGACAGTTTACAAGGTTTCACCGTCCATAATGAA
GCATGGGACAGCTTGGAAATAAGGACCCTGACATTGCACTGAGATTTGAATGTGT

hide sequence

RefSeq Acc Id:

XM_017589098 ⟹ XP_017444587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,680,529 (-)	NCBI
mRatBN7.2	1	7,591,254 - 7,860,431 (-)	NCBI
Rnor_6.0	1	7,352,050 - 7,633,991 (-)	NCBI

Sequence:

show sequence

CCTCCTCCCGCGCTGCGCCCCGCTGCTTGCGGCCGCCTCCCCGCCCTGCCAACCGGCCGGGGGC
TCCGCGCGGGGCCGCGGCGGACAGCACAGCTCTTTGCGCCGGCTCCACCCTGCCTGAGCTTGCT
CCCTCCTGGAGCCTAAAGCGGATGGCGGAAGCTGGCAGGAGCCCTGAGATGTCCCCGGACCAGC
CAGACGGCCAGGAGGCGGTGGCGGCGGAGGTTCCGGACCCCGAGCCCGAGGCTCCCGGACCACC
CGTGCCTGCCCTGCGCTGGCTTCCCGGGGACCCGAGTCCCCGCGGCCGCTCCCAGAGCGACCTG
TCGTCGGCCTCGAGCCGGGGCCGCCCGCTCAGAGTCCACATCTCCGGCTCAGTTGATGGACTAG
ACAAAGCCTCCATAGCAAACTCAGATGGCCCCCCAGCAGGTTCCCAGACACCTCCCTTCAAGAG
AAAGGGGAAACTCTCCACCATTGGTAAAATCTTCAAGCCTTGGAAATGGAGGAAAAAGAAGACC
AGTGACAAGTTTAGAGAGACCTCAGCAGTATTAGAGAGGAAGATATCCACCAGACAAAGTAGAG
AGGAGCTGATAAGAAGGGGCCTGCTTAAGGAATTGCCTGATCAAGATGGAGATGTAACAGTTAA
CTTTGAAAATTCAAACGGGCACATGATACACATCGGAGAGGAAGCTACCCAAGAGGAGAATGTA
GGGAAACCTGAAGAAGGGAATGTCTCTGTGTGTGAGAAAGGACCACCTCGAGAGGAACAGGCAG
AAGAGAAGACAGAGAACTCTGAGATCCACTCTGAAACACCGGCTGCTCTACCTCCTACCGTTCC
TTCTAAACCTAAACCCAAACCCAAACCAAAAAAGTCTTCTGTGCCTCCCAAAGGAGGCACCACG
TCTGGGGCCAGCCACAAAGGGGATGAAGTACCTCCTACTAGAAAAAATGTCAAGGCTCCCAGTA
AGCAGGCCCCCGTCCCTCCGCCCAAGCCAACGAGCCGAAACACATCCCGGGAGGCTGCTGGTTC
CTCTCACCCGAAGAAAACAACTGGTTCCAAAGCCTCATCCTCACCATCTGCTTCGTCCACCTCC
TCTCATCCCAGAGGACCCAAGGAGTCACTCACTGGCAAAGCAGGCGCGGTTGGGACCACAAGGG
GCAAGAAAAAGATTAGCAAGCAGCCAGCAGCGGCGGCATCCCGACTGTCCCCCAACACAGTCAC
TTCTGAAACGTCTAGTCTTAAAGGAGAGCTCTCAGACACTGGGGTAGAGAGCCTCAAGCCAGAG
GAAACTGTTGCTGGAGCAGAGGAGGAGGCCACAGGCAAACCCAAGGCGGTCGTCGTCGCTCTGC
CACCTGTCACAGTACCGCCATCTTCACCTGCCCTTCCTCTGCCCCCTGAGGATCCATGCACTAT
TGCCTTGGACACTCCCATGGTCCTAGTCAGTGATGGACCCACCCTGCCCATCTCTGCCTTAGAA
ACAAGTCCGCTCCCTGGGACTGAAGAACCAGCGAACAGAACCACTCCGTACTCAAGCACCGGCT
TAGGTGGGAGCCGAGAGCAGGCAAAATGTTTTACAACCAAAGATGGGCCGGGAAAGGCTGGACC
TCAATTGCTGACCCCTGGACAGATGGGAGACTCATTAGAATCCTTCAGTGCCCCAGAGGATGAG
GCCCCAAGAGAGTACCAAGCCAATGACTCTGACTCGGATGGACCCATCTTATACACAGATGATG
ATGATGAAGAAGATGATGATGATGACAGCACTGGAGAAAGTGCATTGGCAAGTAAGATCAGACG
AAGGGATACACTCGCCATCAAACTTGGCAACAGACCATCCAAGAAAGAGCTAGAGGACAAAAAC
ATCCTGCAGCGAACGTCTGAAGAAGAAAGGCAGGAGCTGCGACAACAGATCGGAACCAAGCTGG
TCAGGAGACTCAGCCAGAGGCCAACCACTGAAGAATTAGAGCAGAGAAACATCTTAAAACAAAA
GAATGAAGAAGAGGAGCAGGAAGCAAAAATGGAACTCAAACGGAGGCTCAGCCGGAAGCTCAGC
CTAAGACCTACTGTGGCAGAGCTACAAGCCCGAAGAATCCTGCGGTTTAATGAGTATGTGGAAG
TCACAGATTCCCCGGACTACGACAGACGTGCGGACAAGCCCTGGGCCAGGTTGACACCTGCGGA
CAAGGCAGCAATAAGGAAAGAACTAAATGAATTTAAAAGCACGGAAATGGAAGTTCACGAAGAG
AGTCGACAGTTTACAAGGTTTCACCGTCCATAATGAAGCATGGGACAGCTTGGAAATAAGGACC
CTGACATTGCACTGAGATTTGAATGTGTGTGTTTCCGTTTCGTTGTGGTGAAGGAGGTGTACGA
CTCGGCTTTGGTTGAAGACGCTCCTCACCCTGACAGCCCAGACGAGGGCAACAAGCTGAGAGGC
GGATGCGGCAAGCCTGGCTGCCCACGGTGTGCACTGATATAAGGGGCACTCTGACTCTCTCAGC
TATGTTTCAGCGGGAATTTTAATCAAAGAAGACAAGCAGAAGACAATCGCCAGTTTGGCTACCA
GAAAGCCATACGGTATAGCACGTGTGGGTTCACAAACAATAGACATTGGAATTGCTGGTGGCCA
CCCCAACAGGGTGGGAGCTGAAACTGAGAAAGAGAGAGAACCGTTTCATTATGTTAATGAAGAG
AAGAAGAGTGAAGAGAAGTATATTTTTGAAGTAGGCGTTCGGTAGCTGAGGACTTCCTAAGGGA
TTTGGGAACCTACTCAACCAACGTAGATTCCTTAAAGACTTCATTCTAGAACATTCTTGTTTCA
CCAATAATGGTTCTGTGTAGTAGCCTCTTTTTTTTTTTTTTTTAATGTTGTGCCAGTGAACCCA
GTTGCCAGAAACAAATATGAGTGTTCATTCAATGCAAGGAGCTCCTACCAGCTCTCACCAAGCA
TGCTTGCTCTTGCTGTGTTGCATGCCTTTCAGTAGTACAGCCAAGCCCACACTTTCTTATATTG
CTTCCCTAACGTATGAGCGCTCTACAAGGGTAACAGGAATGAGGTCAGATGCAATGTGACCCTG
TAAAACTGTGGCAAGCTTCAGAAATAAATCTTCTGCTCTTTCCCTGTCTTGATTCTCTCCAAAG
TCAGGAAACCATCCTTTAGCTAAAGAAGATGACCCGGACAGTCATGGTACCCTTTAAACACTCA
ATCCAGAGTTGTCACTTAAGCAACATACAAGTGTCTGCTGCCTGCTCCAAGTCCTGAGAGGGGA
TTTAAAGAACATACCAGATAGTTTAAAATCCTGCATTAATTTTTTTTTAATATTAGGTTGCTGC
TATTTTTTTTAAAAAAAAGTGAAACAGTAAAAACCAAGCATATGAATTTAACAAAAATATCCTG
AGGCTTAAAGGAACACAGAAGACGACTTCTGGTTTATGTAAAGGAAACCTTACCTTCTCTGATG
AATTTGTGGATCATATCCATATACCCGGTATTTACTCCCCATGCCAGAGAAGCAGTAAGATCCC
CGGGCCAGCTTCCCCAGGAGTCTGTAATCAGTCTTGTTTACATTAAAAAGCTTCCCCCCTCAAA
TTGTTCTCTTCAGTGTCCGGCCCCAGCACAGAACCCCAGAAGGGCTTACTTGTGATACTACCTT
GAATTTCGTTGTCCCTTAACAATTGTTTTAAGCCCCTTGGATTAAAAGAAGAAGAAAAAGAAGG
CAGAATCTATATCATGCTTTTTTTTTCCTTAAGAAGGCAGAATCTATACCAGGTCTATCTCATT
CTTTGATCTGGAGCTATGCCGATTCTGAAGCCTGTAATTTTCTATTTCGAGTGAACAGTCAGCC
TCGAATCAGTCAAGTAAGTGTAGGCCCTGCCATTCTGTGGTATCTGGAGGGACCGCTTGAAATT
TGATGATTTCATTTAAAAGTGAACGTGGTTAGCGGCAGCGGACTGTTGTGAAAGCCCAGAGGAA
CCGCGCCACGAGGTAACCAGCGTTCATGCACCCACCGCCGTGCTTAGCCGTTTGCGGTAATAAG
ACAAGGCTGCTGCCTACACTAGTTCGTCTGGCTAACAGCATGAGGCAGACTTTGCTTTTGAAAT
AGTGTCTGTGCGTGCACTAGTGTTTGTCTTTGTCTTTGGGGGCTTGCTCGTTCTATTGTTGTTT
TGCAGTGCCGGGACTGAACCAGGCCCTTGCGCATGCTCTGTGTACTCTAACCCCTGAGCCAACA
CCCCTAACCTTCGTTTGACAAGAGTCTCAACTCAACCGTGAATAGTAATTTTGTTCTCATTACT
TATAGAGTAGTTTTCCCTCGTGATATCCTACTATCGTCTTAGTGTCGTGGGAAAAAGTGACAAG
ACAGGTGATGTTCCTTCGTCTATGCTTATAATCTCGAAACGTTTTAAAAACCTTCTAATGAAAT
GTCCTCAAAATGTTGTAAATTCAAGACAGGAGCAACACGGCTTGCCATTCAAAGTGTGTTTCAT
AGAAAGTTTCTGTCTGGTTGGTCAAAAGAACCTTTTTTCCCCACTAGTGGTGCAGGTGACACAG
GTTTTAATCTTCCACAGTTAATGTTCAAAATGCCACGCATCGTTGAAGCTCCCAGTTCAGCCCC
CAGTACTGCACAAACGAAAATCTGTCTCCTGATAACATCTGCCAGATTGGTGTTACCTACACCT
TTTCTTCATACTAACTGATACATTTCAAGAAGCTTTTGTGAGAAAGTTTAGAAAGCTAAAAAAT
TAACTACTAACGGTCTAATATTTAAGTAACCTGGGACCACTGATGACTTCATTATGATGGCCTA
GTACCTGTTTTAAAAGCCGTGGGAAGAATTAAAATATCACGAGCCAAGCTGTACTTCTCAGAAT
AAGGCTCTACTTTGCTGGGTAATTTGTAAAGGCAGAAACGTTTAAAGGCTACATAGCCTTAGCA
GCAGCTCACTCACAGGTCTCCATCCAGGCATCCCCACAGAAGGCAAAGCTCCCTCTCCCTGTAA
TTACCGCTCTGCCCACTGCCAGCATTTCTGCAGTCCAACCAACAAGCAGCTACTCTTTAAGAAA
ATAAATGTGTGCAGAAACCAGGGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGCATGTGT
GTGTTGCCATTGTAACACAATTCCAGTTTTTCACTAAAGCATACCATTAGGCAATGGAGTGAGC
GTTCCTGACTCCGGAGTTATACTAAGGAAAAGAAAATTAGCCCACCTCACTGGAGGCCCCAACA
AGAAAAGAAACTGGACCAGACAGAAAAGCCAAAGTGGCCATTCGGAGGGAGACCCTGTTGGTAT
TACGGTATTGAGAAGACACTAAGCTCCCTTCACGCAGCAGCCTCGTGGTCATCACCAACCAACC
AACGTGACGAATGCAGTCCTAATCCGTGTTCGCCAGGGGCACCTTGGCTGGTCATTTCCTGTAG
GTATGAAATGTCTGGTGGTTTTGTGTGAGCTATAATTTACCTTTATGTTTATTCCTTAAGTTGT
TTTAACCCGAAGTCTGCAATATCCAGAGAACCATCTCGGGTATTTGAGCACCTATTAAAGGAAA
GGCAAGCA

hide sequence

RefSeq Acc Id:

XM_017589101 ⟹ XP_017444590

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,680,597 (-)	NCBI
mRatBN7.2	1	7,591,254 - 7,860,424 (-)	NCBI
Rnor_6.0	1	7,352,050 - 7,633,988 (-)	NCBI

Sequence:

show sequence

CCTCCCGCGCTGCGCCCCGCTGCTTGCGGCCGCCTCCCCGCCCTGCCAACCGGCCGGGGGCTCC
GCGCGGGGCCGCGGCGGACAGCACAGCTCTTTGCGCCGGCTCCACCCTGCCTGAGCTTGCTCCC
TCCTGGAGCCTAAAGCGGATGGCGGAAGCTGGCAGGAGCCCTGAGATGTCCCCGGACCAGCCAG
ACGGCCAGGAGGCGGTGGCGGCGGAGGTTCCGGACCCCGAGCCCGAGGCTCCCGGACCACCCGT
GCCTGCCCTGCGCTGGCTTCCCGGGGACCCGAGTCCCCGCGGCCGCTCCCAGAGCGACCTGTCG
TCGGCCTCGAGCCGGGGCCGCCCGCTCAGAGTCCACATCTCCGGCTCAGTTGATGGACTAGACA
AAGCCTCCATAGCAAACTCAGATGGCCCCCCAGCAGGTTCCCAGACACCTCCCTTCAAGAGAAA
GGGGAAACTCTCCACCATTGGTAAAATCTTCAAGCCTTGGAAATGGAGGAAAAAGAAGACCAGT
GACAAGTTTAGAGAGACCTCAGCAGTATTAGAGAGGAAGATATCCACCAGACAAAGTAGAGAGG
AGCTGATAAGAAGGGGCCTGCTTAAGGAATTGCCTGATCAAGATGGAGATGTAACAGTTAACTT
TGAAAATTCAAACGGGCACATGATACACATCGGAGAGGAAGCTACCCAAGAGGAGAATGTAGGG
AAACCTGAAGAAGGGAATGTCTCTGTGTGTGAGAAAGGACCACCTCGAGAGGAACAGGCAGAAG
AGAAGACAGCTGGTTCCTCTCACCCGAAGAAAACAACTGGTTCCAAAGCCTCATCCTCACCATC
TGCTTCGTCCACCTCCTCTCATCCCAGAGGACCCAAGGAGTCACTCACTGGCAAAGCAGGCGCG
GTTGGGACCACAAGGGGCAAGAAAAAGATTAGCAAGCAGCCAGCAGCGGCGGCATCCCGACTGT
CCCCCAACACAGTCACTTCTGAAACGTCTAGTCTTAAAGGAGAGCTCTCAGACACTGGGGTAGA
GAGCCTCAAGCCAGAGGAAACTGTTGCTGGAGCAGAGGAGGAGGCCACAGGCAAACCCAAGGCG
GTCGTCGTCGCTCTGCCACCTGTCACAGTACCGCCATCTTCACCTGCCCTTCCTCTGCCCCCTG
AGGATCCATGCACTATTGCCTTGGACACTCCCATGGTCCTAGTCAGTGATGGACCCACCCTGCC
CATCTCTGCCTTAGAAACAAGTCCGCTCCCTGGGACTGAAGAACCAGCGAACAGAACCACTCCG
TACTCAAGCACCGGCTTAGGTGGGAGCCGAGAGCAGGCAAAATGTTTTACAACCAAAGATGGGC
CGGGAAAGGCTGGACCTCAATTGCTGACCCCTGGACAGATGGGAGACTCATTAGAATCCTTCAG
TGCCCCAGAGGATGAGGCCCCAAGAGAGTACCAAGCCAATGACTCTGACTCGGATGGACCCATC
TTATACACAGATGATGATGATGAAGAAGATGATGATGATGACAGCACTGGAGAAAGTGCATTGG
CAAGTAAGATCAGACGAAGGGATACACTCGCCATCAAACTTGGCAACAGACCATCCAAGAAAGA
GCTAGAGGACAAAAACATCCTGCAGCGAACGTCTGAAGAAGAAAGGCAGGAGCTGCGACAACAG
ATCGGAACCAAGCTGGTCAGGAGACTCAGCCAGAGGCCAACCACTGAAGAATTAGAGCAGAGAA
ACATCTTAAAACAAAAGAATGAAGAAGAGGAGCAGGAAGCAAAAATGGAACTCAAACGGAGGCT
CAGCCGGAAGCTCAGCCTAAGACCTACTGTGGCAGAGCTACAAGCCCGAAGAATCCTGCGGTTT
AATGAGTATGTGGAAGTCACAGATTCCCCGGACTACGACAGACGTGCGGACAAGCCCTGGGCCA
GGTTGACACCTGCGGACAAGGCAGCAATAAGGAAAGAACTAAATGAATTTAAAAGCACGGAAAT
GGAAGTTCACGAAGAGAGTCGACAGTTTACAAGGTTTCACCGTCCATAATGAAGCATGGGACAG
CTTGGAAATAAGGACCCTGACATTGCACTGAGATTTGAATGTGTGTGTTTCCGTTTCGTTGTGG
TGAAGGAGGTGTACGACTCGGCTTTGGTTGAAGACGCTCCTCACCCTGACAGCCCAGACGAGGG
CAACAAGCTGAGAGGCGGATGCGGCAAGCCTGGCTGCCCACGGTGTGCACTGATATAAGGGGCA
CTCTGACTCTCTCAGCTATGTTTCAGCGGGAATTTTAATCAAAGAAGACAAGCAGAAGACAATC
GCCAGTTTGGCTACCAGAAAGCCATACGGTATAGCACGTGTGGGTTCACAAACAATAGACATTG
GAATTGCTGGTGGCCACCCCAACAGGGTGGGAGCTGAAACTGAGAAAGAGAGAGAACCGTTTCA
TTATGTTAATGAAGAGAAGAAGAGTGAAGAGAAGTATATTTTTGAAGTAGGCGTTCGGTAGCTG
AGGACTTCCTAAGGGATTTGGGAACCTACTCAACCAACGTAGATTCCTTAAAGACTTCATTCTA
GAACATTCTTGTTTCACCAATAATGGTTCTGTGTAGTAGCCTCTTTTTTTTTTTTTTTTAATGT
TGTGCCAGTGAACCCAGTTGCCAGAAACAAATATGAGTGTTCATTCAATGCAAGGAGCTCCTAC
CAGCTCTCACCAAGCATGCTTGCTCTTGCTGTGTTGCATGCCTTTCAGTAGTACAGCCAAGCCC
ACACTTTCTTATATTGCTTCCCTAACGTATGAGCGCTCTACAAGGGTAACAGGAATGAGGTCAG
ATGCAATGTGACCCTGTAAAACTGTGGCAAGCTTCAGAAATAAATCTTCTGCTCTTTCCCTGTC
TTGATTCTCTCCAAAGTCAGGAAACCATCCTTTAGCTAAAGAAGATGACCCGGACAGTCATGGT
ACCCTTTAAACACTCAATCCAGAGTTGTCACTTAAGCAACATACAAGTGTCTGCTGCCTGCTCC
AAGTCCTGAGAGGGGATTTAAAGAACATACCAGATAGTTTAAAATCCTGCATTAATTTTTTTTT
AATATTAGGTTGCTGCTATTTTTTTTAAAAAAAAGTGAAACAGTAAAAACCAAGCATATGAATT
TAACAAAAATATCCTGAGGCTTAAAGGAACACAGAAGACGACTTCTGGTTTATGTAAAGGAAAC
CTTACCTTCTCTGATGAATTTGTGGATCATATCCATATACCCGGTATTTACTCCCCATGCCAGA
GAAGCAGTAAGATCCCCGGGCCAGCTTCCCCAGGAGTCTGTAATCAGTCTTGTTTACATTAAAA
AGCTTCCCCCCTCAAATTGTTCTCTTCAGTGTCCGGCCCCAGCACAGAACCCCAGAAGGGCTTA
CTTGTGATACTACCTTGAATTTCGTTGTCCCTTAACAATTGTTTTAAGCCCCTTGGATTAAAAG
AAGAAGAAAAAGAAGGCAGAATCTATATCATGCTTTTTTTTTCCTTAAGAAGGCAGAATCTATA
CCAGGTCTATCTCATTCTTTGATCTGGAGCTATGCCGATTCTGAAGCCTGTAATTTTCTATTTC
GAGTGAACAGTCAGCCTCGAATCAGTCAAGTAAGTGTAGGCCCTGCCATTCTGTGGTATCTGGA
GGGACCGCTTGAAATTTGATGATTTCATTTAAAAGTGAACGTGGTTAGCGGCAGCGGACTGTTG
TGAAAGCCCAGAGGAACCGCGCCACGAGGTAACCAGCGTTCATGCACCCACCGCCGTGCTTAGC
CGTTTGCGGTAATAAGACAAGGCTGCTGCCTACACTAGTTCGTCTGGCTAACAGCATGAGGCAG
ACTTTGCTTTTGAAATAGTGTCTGTGCGTGCACTAGTGTTTGTCTTTGTCTTTGGGGGCTTGCT
CGTTCTATTGTTGTTTTGCAGTGCCGGGACTGAACCAGGCCCTTGCGCATGCTCTGTGTACTCT
AACCCCTGAGCCAACACCCCTAACCTTCGTTTGACAAGAGTCTCAACTCAACCGTGAATAGTAA
TTTTGTTCTCATTACTTATAGAGTAGTTTTCCCTCGTGATATCCTACTATCGTCTTAGTGTCGT
GGGAAAAAGTGACAAGACAGGTGATGTTCCTTCGTCTATGCTTATAATCTCGAAACGTTTTAAA
AACCTTCTAATGAAATGTCCTCAAAATGTTGTAAATTCAAGACAGGAGCAACACGGCTTGCCAT
TCAAAGTGTGTTTCATAGAAAGTTTCTGTCTGGTTGGTCAAAAGAACCTTTTTTCCCCACTAGT
GGTGCAGGTGACACAGGTTTTAATCTTCCACAGTTAATGTTCAAAATGCCACGCATCGTTGAAG
CTCCCAGTTCAGCCCCCAGTACTGCACAAACGAAAATCTGTCTCCTGATAACATCTGCCAGATT
GGTGTTACCTACACCTTTTCTTCATACTAACTGATACATTTCAAGAAGCTTTTGTGAGAAAGTT
TAGAAAGCTAAAAAATTAACTACTAACGGTCTAATATTTAAGTAACCTGGGACCACTGATGACT
TCATTATGATGGCCTAGTACCTGTTTTAAAAGCCGTGGGAAGAATTAAAATATCACGAGCCAAG
CTGTACTTCTCAGAATAAGGCTCTACTTTGCTGGGTAATTTGTAAAGGCAGAAACGTTTAAAGG
CTACATAGCCTTAGCAGCAGCTCACTCACAGGTCTCCATCCAGGCATCCCCACAGAAGGCAAAG
CTCCCTCTCCCTGTAATTACCGCTCTGCCCACTGCCAGCATTTCTGCAGTCCAACCAACAAGCA
GCTACTCTTTAAGAAAATAAATGTGTGCAGAAACCAGGGCGTGCGTGCGTGCGTGCGTGTGTGT
GTGTGTGTGCATGTGTGTGTTGCCATTGTAACACAATTCCAGTTTTTCACTAAAGCATACCATT
AGGCAATGGAGTGAGCGTTCCTGACTCCGGAGTTATACTAAGGAAAAGAAAATTAGCCCACCTC
ACTGGAGGCCCCAACAAGAAAAGAAACTGGACCAGACAGAAAAGCCAAAGTGGCCATTCGGAGG
GAGACCCTGTTGGTATTACGGTATTGAGAAGACACTAAGCTCCCTTCACGCAGCAGCCTCGTGG
TCATCACCAACCAACCAACGTGACGAATGCAGTCCTAATCCGTGTTCGCCAGGGGCACCTTGGC
TGGTCATTTCCTGTAGGTATGAAATGTCTGGTGGTTTTGTGTGAGCTATAATTTACCTTTATGT
TTATTCCTTAAGTTGTTTTAACCCGAAGTCTGCAATATCCAGAGAACCATCTCGGGTATTTGAG
CACCTATTAAAGGAAAGGCAAGCA

hide sequence

RefSeq Acc Id:

XM_017589102 ⟹ XP_017444591

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,680,525 (-)	NCBI
mRatBN7.2	1	7,591,254 - 7,860,426 (-)	NCBI
Rnor_6.0	1	7,352,050 - 7,633,989 (-)	NCBI

Sequence:

show sequence

TCCTCCCGCGCTGCGCCCCGCTGCTTGCGGCCGCCTCCCCGCCCTGCCAACCGGCCGGGGGCTC
CGCGCGGGGCCGCGGCGGACAGCACAGCTCTTTGCGCCGGCTCCACCCTGCCTGAGCTTGCTCC
CTCCTGGAGCCTAAAGCGGATGGCGGAAGCTGGCAGGAGCCCTGAGATGTCCCCGGACCAGCCA
GACGGCCAGGAGGCGGTGGCGGCGGAGGTTCCGGACCCCGAGCCCGAGGCTCCCGGACCACCCG
TGCCTGCCCTGCGCTGGCTTCCCGGGGACCCGAGTCCCCGCGGCCGCTCCCAGAGCGACCTGTC
GTCGGCCTCGAGCCGGGGCCGCCCGCTCAGAGTCCACATCTCCGGCTCAGTTGATGGACTAGAC
AAAGCCTCCATAGCAAACTCAGATGGCCCCCCAGCAGGTTCCCAGACACCTCCCTTCAAGAGAA
AGGGGAAACTCTCCACCATTGGTAAAATCTTCAAGCCTTGGAAATGGAGGAAAAAGAAGACCAG
TGACAAGTTTAGAGAGACCTCAGCAGTATTAGAGAGGAAGATATCCACCAGACAAAGTAGAGAG
GAGCTGATAAGAAGGGGCCTGCTTAAGGAATTGCCTGATCAAGCTGGTTCCTCTCACCCGAAGA
AAACAACTGGTTCCAAAGCCTCATCCTCACCATCTGCTTCGTCCACCTCCTCTCATCCCAGAGG
ACCCAAGGAGTCACTCACTGGCAAAGCAGGCGCGGTTGGGACCACAAGGGGCAAGAAAAAGATT
AGCAAGCAGCCAGCAGCGGCGGCATCCCGACTGTCCCCCAACACAGTCACTTCTGAAACGTCTA
GTCTTAAAGGAGAGCTCTCAGACACTGGGGTAGAGAGCCTCAAGCCAGAGGAAACTGTTGCTGG
AGCAGAGGAGGAGGCCACAGGCAAACCCAAGGCGGTCGTCGTCGCTCTGCCACCTGTCACAGTA
CCGCCATCTTCACCTGCCCTTCCTCTGCCCCCTGAGGATCCATGCACTATTGCCTTGGACACTC
CCATGGTCCTAGTCAGTGATGGACCCACCCTGCCCATCTCTGCCTTAGAAACAAGTCCGCTCCC
TGGGACTGAAGAACCAGCGAACAGAACCACTCCGTACTCAAGCACCGGCTTAGGTGGGAGCCGA
GAGCAGGCAAAATGTTTTACAACCAAAGATGGGCCGGGAAAGGCTGGACCTCAATTGCTGACCC
CTGGACAGATGGGAGACTCATTAGAATCCTTCAGTGCCCCAGAGGATGAGGCCCCAAGAGAGTA
CCAAGCCAATGACTCTGACTCGGATGGACCCATCTTATACACAGATGATGATGATGAAGAAGAT
GATGATGATGACAGCACTGGAGAAAGTGCATTGGCAAGTAAGATCAGACGAAGGGATACACTCG
CCATCAAACTTGGCAACAGACCATCCAAGAAAGAGCTAGAGGACAAAAACATCCTGCAGCGAAC
GTCTGAAGAAGAAAGGCAGGAGCTGCGACAACAGATCGGAACCAAGCTGGTCAGGAGACTCAGC
CAGAGGCCAACCACTGAAGAATTAGAGCAGAGAAACATCTTAAAACAAAAGAATGAAGAAGAGG
AGCAGGAAGCAAAAATGGAACTCAAACGGAGGCTCAGCCGGAAGCTCAGCCTAAGACCTACTGT
GGCAGAGCTACAAGCCCGAAGAATCCTGCGGTTTAATGAGTATGTGGAAGTCACAGATTCCCCG
GACTACGACAGACGTGCGGACAAGCCCTGGGCCAGGTTGACACCTGCGGACAAGGCAGCAATAA
GGAAAGAACTAAATGAATTTAAAAGCACGGAAATGGAAGTTCACGAAGAGAGTCGACAGTTTAC
AAGGTTTCACCGTCCATAATGAAGCATGGGACAGCTTGGAAATAAGGACCCTGACATTGCACTG
AGATTTGAATGTGTGTGTTTCCGTTTCGTTGTGGTGAAGGAGGTGTACGACTCGGCTTTGGTTG
AAGACGCTCCTCACCCTGACAGCCCAGACGAGGGCAACAAGCTGAGAGGCGGATGCGGCAAGCC
TGGCTGCCCACGGTGTGCACTGATATAAGGGGCACTCTGACTCTCTCAGCTATGTTTCAGCGGG
AATTTTAATCAAAGAAGACAAGCAGAAGACAATCGCCAGTTTGGCTACCAGAAAGCCATACGGT
ATAGCACGTGTGGGTTCACAAACAATAGACATTGGAATTGCTGGTGGCCACCCCAACAGGGTGG
GAGCTGAAACTGAGAAAGAGAGAGAACCGTTTCATTATGTTAATGAAGAGAAGAAGAGTGAAGA
GAAGTATATTTTTGAAGTAGGCGTTCGGTAGCTGAGGACTTCCTAAGGGATTTGGGAACCTACT
CAACCAACGTAGATTCCTTAAAGACTTCATTCTAGAACATTCTTGTTTCACCAATAATGGTTCT
GTGTAGTAGCCTCTTTTTTTTTTTTTTTTAATGTTGTGCCAGTGAACCCAGTTGCCAGAAACAA
ATATGAGTGTTCATTCAATGCAAGGAGCTCCTACCAGCTCTCACCAAGCATGCTTGCTCTTGCT
GTGTTGCATGCCTTTCAGTAGTACAGCCAAGCCCACACTTTCTTATATTGCTTCCCTAACGTAT
GAGCGCTCTACAAGGGTAACAGGAATGAGGTCAGATGCAATGTGACCCTGTAAAACTGTGGCAA
GCTTCAGAAATAAATCTTCTGCTCTTTCCCTGTCTTGATTCTCTCCAAAGTCAGGAAACCATCC
TTTAGCTAAAGAAGATGACCCGGACAGTCATGGTACCCTTTAAACACTCAATCCAGAGTTGTCA
CTTAAGCAACATACAAGTGTCTGCTGCCTGCTCCAAGTCCTGAGAGGGGATTTAAAGAACATAC
CAGATAGTTTAAAATCCTGCATTAATTTTTTTTTAATATTAGGTTGCTGCTATTTTTTTTAAAA
AAAAGTGAAACAGTAAAAACCAAGCATATGAATTTAACAAAAATATCCTGAGGCTTAAAGGAAC
ACAGAAGACGACTTCTGGTTTATGTAAAGGAAACCTTACCTTCTCTGATGAATTTGTGGATCAT
ATCCATATACCCGGTATTTACTCCCCATGCCAGAGAAGCAGTAAGATCCCCGGGCCAGCTTCCC
CAGGAGTCTGTAATCAGTCTTGTTTACATTAAAAAGCTTCCCCCCTCAAATTGTTCTCTTCAGT
GTCCGGCCCCAGCACAGAACCCCAGAAGGGCTTACTTGTGATACTACCTTGAATTTCGTTGTCC
CTTAACAATTGTTTTAAGCCCCTTGGATTAAAAGAAGAAGAAAAAGAAGGCAGAATCTATATCA
TGCTTTTTTTTTCCTTAAGAAGGCAGAATCTATACCAGGTCTATCTCATTCTTTGATCTGGAGC
TATGCCGATTCTGAAGCCTGTAATTTTCTATTTCGAGTGAACAGTCAGCCTCGAATCAGTCAAG
TAAGTGTAGGCCCTGCCATTCTGTGGTATCTGGAGGGACCGCTTGAAATTTGATGATTTCATTT
AAAAGTGAACGTGGTTAGCGGCAGCGGACTGTTGTGAAAGCCCAGAGGAACCGCGCCACGAGGT
AACCAGCGTTCATGCACCCACCGCCGTGCTTAGCCGTTTGCGGTAATAAGACAAGGCTGCTGCC
TACACTAGTTCGTCTGGCTAACAGCATGAGGCAGACTTTGCTTTTGAAATAGTGTCTGTGCGTG
CACTAGTGTTTGTCTTTGTCTTTGGGGGCTTGCTCGTTCTATTGTTGTTTTGCAGTGCCGGGAC
TGAACCAGGCCCTTGCGCATGCTCTGTGTACTCTAACCCCTGAGCCAACACCCCTAACCTTCGT
TTGACAAGAGTCTCAACTCAACCGTGAATAGTAATTTTGTTCTCATTACTTATAGAGTAGTTTT
CCCTCGTGATATCCTACTATCGTCTTAGTGTCGTGGGAAAAAGTGACAAGACAGGTGATGTTCC
TTCGTCTATGCTTATAATCTCGAAACGTTTTAAAAACCTTCTAATGAAATGTCCTCAAAATGTT
GTAAATTCAAGACAGGAGCAACACGGCTTGCCATTCAAAGTGTGTTTCATAGAAAGTTTCTGTC
TGGTTGGTCAAAAGAACCTTTTTTCCCCACTAGTGGTGCAGGTGACACAGGTTTTAATCTTCCA
CAGTTAATGTTCAAAATGCCACGCATCGTTGAAGCTCCCAGTTCAGCCCCCAGTACTGCACAAA
CGAAAATCTGTCTCCTGATAACATCTGCCAGATTGGTGTTACCTACACCTTTTCTTCATACTAA
CTGATACATTTCAAGAAGCTTTTGTGAGAAAGTTTAGAAAGCTAAAAAATTAACTACTAACGGT
CTAATATTTAAGTAACCTGGGACCACTGATGACTTCATTATGATGGCCTAGTACCTGTTTTAAA
AGCCGTGGGAAGAATTAAAATATCACGAGCCAAGCTGTACTTCTCAGAATAAGGCTCTACTTTG
CTGGGTAATTTGTAAAGGCAGAAACGTTTAAAGGCTACATAGCCTTAGCAGCAGCTCACTCACA
GGTCTCCATCCAGGCATCCCCACAGAAGGCAAAGCTCCCTCTCCCTGTAATTACCGCTCTGCCC
ACTGCCAGCATTTCTGCAGTCCAACCAACAAGCAGCTACTCTTTAAGAAAATAAATGTGTGCAG
AAACCAGGGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGCATGTGTGTGTTGCCATTGTA
ACACAATTCCAGTTTTTCACTAAAGCATACCATTAGGCAATGGAGTGAGCGTTCCTGACTCCGG
AGTTATACTAAGGAAAAGAAAATTAGCCCACCTCACTGGAGGCCCCAACAAGAAAAGAAACTGG
ACCAGACAGAAAAGCCAAAGTGGCCATTCGGAGGGAGACCCTGTTGGTATTACGGTATTGAGAA
GACACTAAGCTCCCTTCACGCAGCAGCCTCGTGGTCATCACCAACCAACCAACGTGACGAATGC
AGTCCTAATCCGTGTTCGCCAGGGGCACCTTGGCTGGTCATTTCCTGTAGGTATGAAATGTCTG
GTGGTTTTGTGTGAGCTATAATTTACCTTTATGTTTATTCCTTAAGTTGTTTTAACCCGAAGTC
TGCAATATCCAGAGAACCATCTCGGGTATTTGAGCACCTATTAAAGGAAAGGCAAGCA

hide sequence

RefSeq Acc Id:

XM_017589103 ⟹ XP_017444592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,680,648 (-)	NCBI
mRatBN7.2	1	7,591,254 - 7,860,427 (-)	NCBI
Rnor_6.0	1	7,352,050 - 7,633,990 (-)	NCBI

Sequence:

show sequence

CTCCTCCCGCGCTGCGCCCCGCTGCTTGCGGCCGCCTCCCCGCCCTGCCAACCGGCCGGGGGCT
CCGCGCGGGGCCGCGGCGGACAGCACAGCTCTTTGCGCCGGCTCCACCCTGCCTGAGCTTGCTC
CCTCCTGGAGCCTAAAGCGGATGGCGGAAGCTGGCAGGAGCCCTGAGATGTCCCCGGACCAGCC
AGACGGCCAGGAGGCGGTGGCGGCGGAGGTTCCGGACCCCGAGCCCGAGGCTCCCGGACCACCC
GTGCCTGCCCTGCGCTGGCTTCCCGGGGACCCGAGTCCCCGCGGCCGCTCCCAGAGCGACCTGT
CGTCGGCCTCGAGCCGGGGCCGCCCGCTCAGAGTCCACATCTCCGGCTCAGTTGATGGACTAGA
CAAAGCCTCCATAGCAAACTCAGATGGCCCCCCAGCAGGTTCCCAGACACCTCCCTTCAAGAGA
AAGGGGAAACTCTCCACCATTGGTAAAATCTTCAAGCCTTGGAAATGGAGGAAAAAGAAGACCA
GTGACAAGTTTAGAGAGACCTCAGCAGCTGGTTCCTCTCACCCGAAGAAAACAACTGGTTCCAA
AGCCTCATCCTCACCATCTGCTTCGTCCACCTCCTCTCATCCCAGAGGACCCAAGGAGTCACTC
ACTGGCAAAGCAGGCGCGGTTGGGACCACAAGGGGCAAGAAAAAGATTAGCAAGCAGCCAGCAG
CGGCGGCATCCCGACTGTCCCCCAACACAGTCACTTCTGAAACGTCTAGTCTTAAAGGAGAGCT
CTCAGACACTGGGGTAGAGAGCCTCAAGCCAGAGGAAACTGTTGCTGGAGCAGAGGAGGAGGCC
ACAGGCAAACCCAAGGCGGTCGTCGTCGCTCTGCCACCTGTCACAGTACCGCCATCTTCACCTG
CCCTTCCTCTGCCCCCTGAGGATCCATGCACTATTGCCTTGGACACTCCCATGGTCCTAGTCAG
TGATGGACCCACCCTGCCCATCTCTGCCTTAGAAACAAGTCCGCTCCCTGGGACTGAAGAACCA
GCGAACAGAACCACTCCGTACTCAAGCACCGGCTTAGGTGGGAGCCGAGAGCAGGCAAAATGTT
TTACAACCAAAGATGGGCCGGGAAAGGCTGGACCTCAATTGCTGACCCCTGGACAGATGGGAGA
CTCATTAGAATCCTTCAGTGCCCCAGAGGATGAGGCCCCAAGAGAGTACCAAGCCAATGACTCT
GACTCGGATGGACCCATCTTATACACAGATGATGATGATGAAGAAGATGATGATGATGACAGCA
CTGGAGAAAGTGCATTGGCAAGTAAGATCAGACGAAGGGATACACTCGCCATCAAACTTGGCAA
CAGACCATCCAAGAAAGAGCTAGAGGACAAAAACATCCTGCAGCGAACGTCTGAAGAAGAAAGG
CAGGAGCTGCGACAACAGATCGGAACCAAGCTGGTCAGGAGACTCAGCCAGAGGCCAACCACTG
AAGAATTAGAGCAGAGAAACATCTTAAAACAAAAGAATGAAGAAGAGGAGCAGGAAGCAAAAAT
GGAACTCAAACGGAGGCTCAGCCGGAAGCTCAGCCTAAGACCTACTGTGGCAGAGCTACAAGCC
CGAAGAATCCTGCGGTTTAATGAGTATGTGGAAGTCACAGATTCCCCGGACTACGACAGACGTG
CGGACAAGCCCTGGGCCAGGTTGACACCTGCGGACAAGGCAGCAATAAGGAAAGAACTAAATGA
ATTTAAAAGCACGGAAATGGAAGTTCACGAAGAGAGTCGACAGTTTACAAGGTTTCACCGTCCA
TAATGAAGCATGGGACAGCTTGGAAATAAGGACCCTGACATTGCACTGAGATTTGAATGTGTGT
GTTTCCGTTTCGTTGTGGTGAAGGAGGTGTACGACTCGGCTTTGGTTGAAGACGCTCCTCACCC
TGACAGCCCAGACGAGGGCAACAAGCTGAGAGGCGGATGCGGCAAGCCTGGCTGCCCACGGTGT
GCACTGATATAAGGGGCACTCTGACTCTCTCAGCTATGTTTCAGCGGGAATTTTAATCAAAGAA
GACAAGCAGAAGACAATCGCCAGTTTGGCTACCAGAAAGCCATACGGTATAGCACGTGTGGGTT
CACAAACAATAGACATTGGAATTGCTGGTGGCCACCCCAACAGGGTGGGAGCTGAAACTGAGAA
AGAGAGAGAACCGTTTCATTATGTTAATGAAGAGAAGAAGAGTGAAGAGAAGTATATTTTTGAA
GTAGGCGTTCGGTAGCTGAGGACTTCCTAAGGGATTTGGGAACCTACTCAACCAACGTAGATTC
CTTAAAGACTTCATTCTAGAACATTCTTGTTTCACCAATAATGGTTCTGTGTAGTAGCCTCTTT
TTTTTTTTTTTTTAATGTTGTGCCAGTGAACCCAGTTGCCAGAAACAAATATGAGTGTTCATTC
AATGCAAGGAGCTCCTACCAGCTCTCACCAAGCATGCTTGCTCTTGCTGTGTTGCATGCCTTTC
AGTAGTACAGCCAAGCCCACACTTTCTTATATTGCTTCCCTAACGTATGAGCGCTCTACAAGGG
TAACAGGAATGAGGTCAGATGCAATGTGACCCTGTAAAACTGTGGCAAGCTTCAGAAATAAATC
TTCTGCTCTTTCCCTGTCTTGATTCTCTCCAAAGTCAGGAAACCATCCTTTAGCTAAAGAAGAT
GACCCGGACAGTCATGGTACCCTTTAAACACTCAATCCAGAGTTGTCACTTAAGCAACATACAA
GTGTCTGCTGCCTGCTCCAAGTCCTGAGAGGGGATTTAAAGAACATACCAGATAGTTTAAAATC
CTGCATTAATTTTTTTTTAATATTAGGTTGCTGCTATTTTTTTTAAAAAAAAGTGAAACAGTAA
AAACCAAGCATATGAATTTAACAAAAATATCCTGAGGCTTAAAGGAACACAGAAGACGACTTCT
GGTTTATGTAAAGGAAACCTTACCTTCTCTGATGAATTTGTGGATCATATCCATATACCCGGTA
TTTACTCCCCATGCCAGAGAAGCAGTAAGATCCCCGGGCCAGCTTCCCCAGGAGTCTGTAATCA
GTCTTGTTTACATTAAAAAGCTTCCCCCCTCAAATTGTTCTCTTCAGTGTCCGGCCCCAGCACA
GAACCCCAGAAGGGCTTACTTGTGATACTACCTTGAATTTCGTTGTCCCTTAACAATTGTTTTA
AGCCCCTTGGATTAAAAGAAGAAGAAAAAGAAGGCAGAATCTATATCATGCTTTTTTTTTCCTT
AAGAAGGCAGAATCTATACCAGGTCTATCTCATTCTTTGATCTGGAGCTATGCCGATTCTGAAG
CCTGTAATTTTCTATTTCGAGTGAACAGTCAGCCTCGAATCAGTCAAGTAAGTGTAGGCCCTGC
CATTCTGTGGTATCTGGAGGGACCGCTTGAAATTTGATGATTTCATTTAAAAGTGAACGTGGTT
AGCGGCAGCGGACTGTTGTGAAAGCCCAGAGGAACCGCGCCACGAGGTAACCAGCGTTCATGCA
CCCACCGCCGTGCTTAGCCGTTTGCGGTAATAAGACAAGGCTGCTGCCTACACTAGTTCGTCTG
GCTAACAGCATGAGGCAGACTTTGCTTTTGAAATAGTGTCTGTGCGTGCACTAGTGTTTGTCTT
TGTCTTTGGGGGCTTGCTCGTTCTATTGTTGTTTTGCAGTGCCGGGACTGAACCAGGCCCTTGC
GCATGCTCTGTGTACTCTAACCCCTGAGCCAACACCCCTAACCTTCGTTTGACAAGAGTCTCAA
CTCAACCGTGAATAGTAATTTTGTTCTCATTACTTATAGAGTAGTTTTCCCTCGTGATATCCTA
CTATCGTCTTAGTGTCGTGGGAAAAAGTGACAAGACAGGTGATGTTCCTTCGTCTATGCTTATA
ATCTCGAAACGTTTTAAAAACCTTCTAATGAAATGTCCTCAAAATGTTGTAAATTCAAGACAGG
AGCAACACGGCTTGCCATTCAAAGTGTGTTTCATAGAAAGTTTCTGTCTGGTTGGTCAAAAGAA
CCTTTTTTCCCCACTAGTGGTGCAGGTGACACAGGTTTTAATCTTCCACAGTTAATGTTCAAAA
TGCCACGCATCGTTGAAGCTCCCAGTTCAGCCCCCAGTACTGCACAAACGAAAATCTGTCTCCT
GATAACATCTGCCAGATTGGTGTTACCTACACCTTTTCTTCATACTAACTGATACATTTCAAGA
AGCTTTTGTGAGAAAGTTTAGAAAGCTAAAAAATTAACTACTAACGGTCTAATATTTAAGTAAC
CTGGGACCACTGATGACTTCATTATGATGGCCTAGTACCTGTTTTAAAAGCCGTGGGAAGAATT
AAAATATCACGAGCCAAGCTGTACTTCTCAGAATAAGGCTCTACTTTGCTGGGTAATTTGTAAA
GGCAGAAACGTTTAAAGGCTACATAGCCTTAGCAGCAGCTCACTCACAGGTCTCCATCCAGGCA
TCCCCACAGAAGGCAAAGCTCCCTCTCCCTGTAATTACCGCTCTGCCCACTGCCAGCATTTCTG
CAGTCCAACCAACAAGCAGCTACTCTTTAAGAAAATAAATGTGTGCAGAAACCAGGGCGTGCGT
GCGTGCGTGCGTGTGTGTGTGTGTGTGCATGTGTGTGTTGCCATTGTAACACAATTCCAGTTTT
TCACTAAAGCATACCATTAGGCAATGGAGTGAGCGTTCCTGACTCCGGAGTTATACTAAGGAAA
AGAAAATTAGCCCACCTCACTGGAGGCCCCAACAAGAAAAGAAACTGGACCAGACAGAAAAGCC
AAAGTGGCCATTCGGAGGGAGACCCTGTTGGTATTACGGTATTGAGAAGACACTAAGCTCCCTT
CACGCAGCAGCCTCGTGGTCATCACCAACCAACCAACGTGACGAATGCAGTCCTAATCCGTGTT
CGCCAGGGGCACCTTGGCTGGTCATTTCCTGTAGGTATGAAATGTCTGGTGGTTTTGTGTGAGC
TATAATTTACCTTTATGTTTATTCCTTAAGTTGTTTTAACCCGAAGTCTGCAATATCCAGAGAA
CCATCTCGGGTATTTGAGCACCTATTAAAGGAAAGGCAAGCA

hide sequence

RefSeq Acc Id:

XM_063288641 ⟹ XP_063144711

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,531,170 (-)	NCBI

RefSeq Acc Id:

XM_063288643 ⟹ XP_063144713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,597,670 (-)	NCBI

RefSeq Acc Id:

XM_063288648 ⟹ XP_063144718

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,531,176 (-)	NCBI

RefSeq Acc Id:

XM_063288655 ⟹ XP_063144725

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,596,867 (-)	NCBI

RefSeq Acc Id:

XM_063288658 ⟹ XP_063144728

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,468,235 (-)	NCBI

RefSeq Acc Id:

XM_063288660 ⟹ XP_063144730

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,531,114 (-)	NCBI

RefSeq Acc Id:

XM_063288661 ⟹ XP_063144731

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,596,876 (-)	NCBI

RefSeq Acc Id:

XM_063288662 ⟹ XP_063144732

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,531,115 (-)	NCBI

RefSeq Acc Id:

XM_063288664 ⟹ XP_063144734

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,596,902 (-)	NCBI

RefSeq Acc Id:

XM_063288665 ⟹ XP_063144735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,531,115 (-)	NCBI

RefSeq Acc Id:

XM_063288666 ⟹ XP_063144736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	9,411,412 - 9,459,430 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001424732	(Get FASTA)	NCBI Sequence Viewer
	NP_001424733	(Get FASTA)	NCBI Sequence Viewer
	NP_001424734	(Get FASTA)	NCBI Sequence Viewer
	NP_001424735	(Get FASTA)	NCBI Sequence Viewer
	NP_001424736	(Get FASTA)	NCBI Sequence Viewer
	NP_001424737	(Get FASTA)	NCBI Sequence Viewer
	NP_999623	(Get FASTA)	NCBI Sequence Viewer
	XP_017444587	(Get FASTA)	NCBI Sequence Viewer
	XP_017444590	(Get FASTA)	NCBI Sequence Viewer
	XP_017444591	(Get FASTA)	NCBI Sequence Viewer
	XP_017444592	(Get FASTA)	NCBI Sequence Viewer
	XP_063144711	(Get FASTA)	NCBI Sequence Viewer
	XP_063144713	(Get FASTA)	NCBI Sequence Viewer
	XP_063144718	(Get FASTA)	NCBI Sequence Viewer
	XP_063144725	(Get FASTA)	NCBI Sequence Viewer
	XP_063144728	(Get FASTA)	NCBI Sequence Viewer
	XP_063144730	(Get FASTA)	NCBI Sequence Viewer
	XP_063144731	(Get FASTA)	NCBI Sequence Viewer
	XP_063144732	(Get FASTA)	NCBI Sequence Viewer
	XP_063144734	(Get FASTA)	NCBI Sequence Viewer
	XP_063144735	(Get FASTA)	NCBI Sequence Viewer
	XP_063144736	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAS86432	(Get FASTA)	NCBI Sequence Viewer
	EDL93729	(Get FASTA)	NCBI Sequence Viewer
	EDL93730	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000045608
	ENSRNOP00000079024
	ENSRNOP00000081040
	ENSRNOP00000081639
	ENSRNOP00000090478
	ENSRNOP00000091111
GenBank Protein	P62025	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_999623 ⟸ NM_214458

- UniProtKB:

P62025 (UniProtKB/Swiss-Prot), G3V9F4 (UniProtKB/TrEMBL), A6JP58 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGQTSVSALSPQPGSVDGLDKASIANSDGPPAGSQTPPFKRKGKLSTIGKIFKPWKWRKEKTSD
KFRETSAVLERKISTRQSREELIRRGLLKELPDQDGDVTVNFENSNGHMIHIGEEATQEENVGK
PEEGNVSVCEKGPPREEQAEEKTAGSSHPKKTTGSKASSSPSASSTSSHPRGPKESLTGKAGAV
GTTRGKKKISKQPAAAASRLSPNTVTSETSSLKGELSDTGVESLKPEETVAGAEEEATGKPKAV
VVALPPVTVPPSSPALPLPPEDPCTIALDTPMVLVSDGPTLPISALETSPLPGTEEPANRTTPY
SSTGLGGSREQAKCFTTKDGLGKAGPQLLTPGQMGDSLESFSAPEDEAPREYQANDSDSDGPIL
YTDDDDEEDDDDDSTGESALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQELRQQI
GTKLVRRLSQRPTTEELEQRSILKQKNEEEEQEAKMELKRRLSRKLSLRPTVPELQARRILRFN
EYVEVTDSPDYDRRADKPWARLTPADKAAIRKELNEFKSTEMEVHEESRQFTRFHRP

hide sequence

RefSeq Acc Id:	XP_017444587 ⟸ XM_017589098
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AEE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAGRSPEMSPDQPDGQEAVAAEVPDPEPEAPGPPVPALRWLPGDPSPRGRSQSDLSSASSRG RPLRVHISGSVDGLDKASIANSDGPPAGSQTPPFKRKGKLSTIGKIFKPWKWRKKKTSDKFRET SAVLERKISTRQSREELIRRGLLKELPDQDGDVTVNFENSNGHMIHIGEEATQEENVGKPEEGN VSVCEKGPPREEQAEEKTENSEIHSETPAALPPTVPSKPKPKPKPKKSSVPPKGGTTSGASHKG DEVPPTRKNVKAPSKQAPVPPPKPTSRNTSREAAGSSHPKKTTGSKASSSPSASSTSSHPRGPK ESLTGKAGAVGTTRGKKKISKQPAAAASRLSPNTVTSETSSLKGELSDTGVESLKPEETVAGAE EEATGKPKAVVVALPPVTVPPSSPALPLPPEDPCTIALDTPMVLVSDGPTLPISALETSPLPGT EEPANRTTPYSSTGLGGSREQAKCFTTKDGPGKAGPQLLTPGQMGDSLESFSAPEDEAPREYQA NDSDSDGPILYTDDDDEEDDDDDSTGESALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSE EERQELRQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTVAE LQARRILRFNEYVEVTDSPDYDRRADKPWARLTPADKAAIRKELNEFKSTEMEVHEESRQFTRF HRP hide sequence

RefSeq Acc Id:	XP_017444592 ⟸ XM_017589103
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6AEE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAGRSPEMSPDQPDGQEAVAAEVPDPEPEAPGPPVPALRWLPGDPSPRGRSQSDLSSASSRG RPLRVHISGSVDGLDKASIANSDGPPAGSQTPPFKRKGKLSTIGKIFKPWKWRKKKTSDKFRET SAAGSSHPKKTTGSKASSSPSASSTSSHPRGPKESLTGKAGAVGTTRGKKKISKQPAAAASRLS PNTVTSETSSLKGELSDTGVESLKPEETVAGAEEEATGKPKAVVVALPPVTVPPSSPALPLPPE DPCTIALDTPMVLVSDGPTLPISALETSPLPGTEEPANRTTPYSSTGLGGSREQAKCFTTKDGP GKAGPQLLTPGQMGDSLESFSAPEDEAPREYQANDSDSDGPILYTDDDDEEDDDDDSTGESALA SKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQELRQQIGTKLVRRLSQRPTTEELEQRN ILKQKNEEEEQEAKMELKRRLSRKLSLRPTVAELQARRILRFNEYVEVTDSPDYDRRADKPWAR LTPADKAAIRKELNEFKSTEMEVHEESRQFTRFHRP hide sequence

RefSeq Acc Id:	XP_017444591 ⟸ XM_017589102
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6AEE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAGRSPEMSPDQPDGQEAVAAEVPDPEPEAPGPPVPALRWLPGDPSPRGRSQSDLSSASSRG RPLRVHISGSVDGLDKASIANSDGPPAGSQTPPFKRKGKLSTIGKIFKPWKWRKKKTSDKFRET SAVLERKISTRQSREELIRRGLLKELPDQAGSSHPKKTTGSKASSSPSASSTSSHPRGPKESLT GKAGAVGTTRGKKKISKQPAAAASRLSPNTVTSETSSLKGELSDTGVESLKPEETVAGAEEEAT GKPKAVVVALPPVTVPPSSPALPLPPEDPCTIALDTPMVLVSDGPTLPISALETSPLPGTEEPA NRTTPYSSTGLGGSREQAKCFTTKDGPGKAGPQLLTPGQMGDSLESFSAPEDEAPREYQANDSD SDGPILYTDDDDEEDDDDDSTGESALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQ ELRQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTVAELQAR RILRFNEYVEVTDSPDYDRRADKPWARLTPADKAAIRKELNEFKSTEMEVHEESRQFTRFHRP hide sequence

RefSeq Acc Id:

XP_017444590 ⟸ XM_017589101

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAEAGRSPEMSPDQPDGQEAVAAEVPDPEPEAPGPPVPALRWLPGDPSPRGRSQSDLSSASSRG
RPLRVHISGSVDGLDKASIANSDGPPAGSQTPPFKRKGKLSTIGKIFKPWKWRKKKTSDKFRET
SAVLERKISTRQSREELIRRGLLKELPDQDGDVTVNFENSNGHMIHIGEEATQEENVGKPEEGN
VSVCEKGPPREEQAEEKTAGSSHPKKTTGSKASSSPSASSTSSHPRGPKESLTGKAGAVGTTRG
KKKISKQPAAAASRLSPNTVTSETSSLKGELSDTGVESLKPEETVAGAEEEATGKPKAVVVALP
PVTVPPSSPALPLPPEDPCTIALDTPMVLVSDGPTLPISALETSPLPGTEEPANRTTPYSSTGL
GGSREQAKCFTTKDGPGKAGPQLLTPGQMGDSLESFSAPEDEAPREYQANDSDSDGPILYTDDD
DEEDDDDDSTGESALASKIRRRDTLAIKLGNRPSKKELEDKNILQRTSEEERQELRQQIGTKLV
RRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTVAELQARRILRFNEYVEV
TDSPDYDRRADKPWARLTPADKAAIRKELNEFKSTEMEVHEESRQFTRFHRP

hide sequence

Ensembl Acc Id:

ENSRNOP00000045608 ⟸ ENSRNOT00000048754

Ensembl Acc Id:

ENSRNOP00000074696 ⟸ ENSRNOT00000088558

Ensembl Acc Id:

ENSRNOP00000090478 ⟸ ENSRNOT00000117080

Ensembl Acc Id:

ENSRNOP00000087602 ⟸ ENSRNOT00000114682

Ensembl Acc Id:

ENSRNOP00000091111 ⟸ ENSRNOT00000098982

Ensembl Acc Id:

ENSRNOP00000079024 ⟸ ENSRNOT00000095947

Ensembl Acc Id:

ENSRNOP00000079720 ⟸ ENSRNOT00000118762

Ensembl Acc Id:

ENSRNOP00000092238 ⟸ ENSRNOT00000106732

Ensembl Acc Id:

ENSRNOP00000081639 ⟸ ENSRNOT00000103115

Ensembl Acc Id:

ENSRNOP00000081040 ⟸ ENSRNOT00000118029

RefSeq Acc Id:	XP_063144713 ⟸ XM_063288643
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6G7F9 (UniProtKB/TrEMBL), A0A8I5ZSY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144734 ⟸ XM_063288664
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I5ZSY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144731 ⟸ XM_063288661
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063144725 ⟸ XM_063288655
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063144718 ⟸ XM_063288648
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A650 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144711 ⟸ XM_063288641
- Peptide Label:	isoform X2
- UniProtKB:	P62025 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063144735 ⟸ XM_063288665
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6A650 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144732 ⟸ XM_063288662
- Peptide Label:	isoform X12
- UniProtKB:	P62025 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063144730 ⟸ XM_063288660
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063144728 ⟸ XM_063288658
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063144736 ⟸ XM_063288666
- Peptide Label:	isoform X15
- UniProtKB:	A0A8I6A650 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P62025-F1-model_v2	AlphaFold	P62025	1-569	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303141	AgrOrtholog
BioCyc Gene	G2FUF-62364	BioCyc
Ensembl Genes	ENSRNOG00000015473	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000048754	ENTREZGENE
	ENSRNOT00000095947	ENTREZGENE
	ENSRNOT00000098982	ENTREZGENE
	ENSRNOT00000103115	ENTREZGENE
	ENSRNOT00000117080	ENTREZGENE
	ENSRNOT00000118029	ENTREZGENE
Gene3D-CATH	6.10.140.1750	UniProtKB/Swiss-Prot
	6.10.140.2130	UniProtKB/Swiss-Prot
InterPro	RPEL_repeat	UniProtKB/Swiss-Prot
KEGG Report	rno:308291	UniProtKB/Swiss-Prot
NCBI Gene	308291	ENTREZGENE
PANTHER	PHOSPHATASE AND ACTIN REGULATOR PHACTR	UniProtKB/Swiss-Prot
	PTHR12751:SF5	UniProtKB/Swiss-Prot
Pfam	RPEL	UniProtKB/Swiss-Prot
PhenoGen	Phactr2	PhenoGen
PROSITE	RPEL	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000015473	RatGTEx
SMART	RPEL	UniProtKB/Swiss-Prot
UniProt	A0A0G2K8Q4_RAT	UniProtKB/TrEMBL
	A0A8I5ZMK8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZNC9_RAT	UniProtKB/TrEMBL
	A0A8I5ZSY0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A650	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AEE3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AF00	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AHS5_RAT	UniProtKB/TrEMBL
	A0A8I6G7F9	ENTREZGENE, UniProtKB/TrEMBL
	A6JP57_RAT	UniProtKB/TrEMBL
	A6JP58	ENTREZGENE, UniProtKB/TrEMBL
	G3V9F4	ENTREZGENE, UniProtKB/TrEMBL
	P62025	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-11-17	Phactr2	phosphatase and actin regulator 2			Symbol and Name status set to approved	1299863	APPROVED
2005-02-14	Phactr2	phosphatase and actin regulator 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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