1810024B03Rikl (RIKEN cDNA 1810024B03 gene like) - Rat Genome Database

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Gene: 1810024B03Rikl (RIKEN cDNA 1810024B03 gene like) Rattus norvegicus
Analyze
Symbol: 1810024B03Rikl (Ensembl: LOC103690174)
Name: RIKEN cDNA 1810024B03 gene like (Ensembl:sperm motility kinase X-like)
RGD ID: 9476012
Description: Predicted to enable ATP binding activity and protein kinase activity.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102552077; LOC103690174; sperm motility kinase X-like; sperm motility kinase-like; uncharacterized LOC102552077
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83159,585,646 - 159,618,647 (-)NCBIGRCr8
mRatBN7.23139,125,202 - 139,171,387 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,125,193 - 139,158,041 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03146,033,491 - 146,045,690 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03151,768,155 - 151,798,173 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3137,913,654 - 137,924,705 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Variants

.
Variants in 1810024B03Rikl
304 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)378196190146592722Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)394856903159898684Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)395735366140735366Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)397084464142084464Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)397551417147415807Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
619618Rf3Renal disease susceptibility QTL 36.50.001urine albumin amount (VT:0002871)urine albumin excretion rate to body weight ratio (CMO:0001270)3107693393152693393Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3121056165145956249Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3121056165157309487Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3130193298161695983Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_017592246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017592247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017592248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063285040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005502611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000100206   ⟹   ENSRNOP00000088695
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3139,125,193 - 139,158,041 (-)Ensembl
RefSeq Acc Id: XM_063285040   ⟹   XP_063141110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,610,871 - 159,618,647 (-)NCBI
RefSeq Acc Id: XR_005502593
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502596
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502597
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502598
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502600
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502601
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502602
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502605
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502606
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502608
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502609
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_005502611
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
mRatBN7.23139,125,202 - 139,158,114 (-)NCBI
RefSeq Acc Id: XR_010064925
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064926
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064927
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064928
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064929
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064930
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064931
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064932
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064933
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064934
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064935
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064936
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064937
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064938
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064939
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064940
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,618,640 (-)NCBI
RefSeq Acc Id: XR_010064941
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,459 (-)NCBI
RefSeq Acc Id: XR_010064942
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,609,918 (-)NCBI
RefSeq Acc Id: XR_010064943
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,478 (-)NCBI
RefSeq Acc Id: XR_010064944
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,474 (-)NCBI
RefSeq Acc Id: XR_010064945
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,481 (-)NCBI
RefSeq Acc Id: XR_010064946
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,478 (-)NCBI
RefSeq Acc Id: XR_010064947
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,475 (-)NCBI
RefSeq Acc Id: XR_010064948
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,484 (-)NCBI
RefSeq Acc Id: XR_010064949
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,486 (-)NCBI
RefSeq Acc Id: XR_010064950
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,585,646 - 159,607,489 (-)NCBI
Protein Sequences
Protein RefSeqs XP_063141110 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000088695.1
RefSeq Acc Id: ENSRNOP00000088695   ⟸   ENSRNOT00000100206
RefSeq Acc Id: XP_063141110   ⟸   XM_063285040
Protein Domains
Protein kinase   UBA

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-47385 BioCyc
Ensembl Genes ENSRNOG00000068068 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000100206.1 UniProtKB/TrEMBL
Gene3D-CATH DNA helicase RuvA subunit, C-terminal domain UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
  UBA UniProtKB/TrEMBL
NCBI Gene LOC103690174 ENTREZGENE
PANTHER GENE 10662-RELATED UniProtKB/TrEMBL
  MAP/MICROTUBULE AFFINITY-REGULATING KINASE UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PhenoGen 1810024B03Rikl PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
  UBA UniProtKB/TrEMBL
RatGTEx ENSRNOG00000068068 RatGTEx
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A8I6AJD2_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 1810024B03Rikl  RIKEN cDNA 1810024B03 gene like  LOC103690174  sperm motility kinase X-like  Symbol and Name Changed 1299863 APPROVED
2021-03-09 LOC103690174  sperm motility kinase X-like  LOC102552077  uncharacterized LOC102552077  Data merged from RGD:7721407 737654 PROVISIONAL
2014-08-25 LOC103690174  sperm motility kinase X-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-12-18 LOC102552077  uncharacterized LOC102552077      Symbol and Name status set to provisional 70820 PROVISIONAL