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Gene: Gtf2i (general transcription factor II I) Rattus norvegicus

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Symbol:

Gtf2i

Name:

general transcription factor II I

RGD ID:

727961

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II-specific DNA-binding transcription factor binding activity. Involved in negative regulation of cytosolic calcium ion concentration. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human GTF2I (general transcription factor IIi); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

general transcription factor II-I; Gtf2ird1; GTFII-I; MGC94055; TFII-I

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GTF2I (general transcription factor IIi)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther, PhylomeDB
Mus musculus (house mouse):	Gtf2i (general transcription factor II I)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gtf2i (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GTF2I (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GTF2I (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gtf2i (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GTF2I (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GTF2I (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gtf2i (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Gtf2i (general transcription factor IIi)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	GATC (glutamyl-tRNA amidotransferase subunit C)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	GTF2I (general transcription factor IIi)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GTF2I (general transcription factor IIi)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Gtf2i (general transcription factor II I)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gtf2i	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gtf2i	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Is Marker For:

Strains: DA.ACI-(D12Mit2-Gtf2i)/Nsi

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	28,037,344 - 28,112,677 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	28,037,853 - 28,112,677 (+)	Ensembl				GRCr8
mRatBN7.2	12	22,400,933 - 22,476,243 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	22,401,431 - 22,476,243 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	23,544,441 - 23,619,242 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	24,155,505 - 24,230,339 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	23,221,169 - 23,295,801 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	25,410,804 - 25,487,970 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	25,411,207 - 25,488,156 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	27,420,618 - 27,497,928 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	23,470,042 - 23,545,621 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	24,164,158 - 24,238,521 (+)	NCBI		Celera
RGSC_v3.1	12	23,350,478 - 23,408,833 (+)	NCBI
Cytogenetic Map	12	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

atrial fibrillation (ISO)

autism spectrum disorder (ISO)

basal cell carcinoma (ISO)

Sjogren's syndrome (ISO)

Thymic Epithelial Tumor (ISO)

Williams-Beuren syndrome (ISO,ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (EXP,ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

6-propyl-2-thiouracil (EXP)

acetylsalicylic acid (ISO)

aldehydo-D-glucose (ISO)

allethrin (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

beta-naphthoflavone (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

celastrol (ISO)

cerium trichloride (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

coumarin (ISO)

cyhalothrin (EXP)

cypermethrin (EXP)

D-glucose (ISO)

diarsenic trioxide (ISO)

diethylstilbestrol (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

ethanol (ISO)

fenthion (ISO)

fenvalerate (EXP)

flutamide (EXP)

folic acid (ISO)

furan (EXP)

gentamycin (EXP)

glafenine (EXP)

glucose (ISO)

glyphosate (EXP)

hexadecanoic acid (ISO)

ivermectin (ISO)

menadione (ISO)

methapyrilene (EXP)

methidathion (ISO)

methimazole (EXP)

N-methyl-N'-nitro-N-nitrosoguanidine (ISO)

ochratoxin A (ISO)

paclitaxel (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phosgene (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

propiconazole (ISO)

pyrethrins (EXP)

rac-lactic acid (ISO)

reactive oxygen species (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (EXP,ISO)

sulfadimethoxine (EXP)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

tetrachloromethane (EXP)

thapsigargin (EXP)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

topotecan (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

tungsten (ISO)

valproic acid (ISO)

vincaleukoblastine (ISO)

vinclozolin (EXP)

vorinostat (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of angiogenesis (ISO)

negative regulation of cytosolic calcium ion concentration (IMP)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

transcription by RNA polymerase II (IEA)

transition between slow and fast fiber (ISO)

Cellular Component

cell projection (ISO)

cytoplasm (IEA)

neuronal cell body (ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA,ISO)

DNA-binding transcription factor activity (IBA)

mitogen-activated protein kinase binding (ISO)

protein binding (ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Action of TFII-I outside the nucleus as an inhibitor of agonist-induced calcium entry.	Caraveo G, etal., Science. 2006 Oct 6;314(5796):122-5.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
4.	Positional identification of Ncf1 as a gene that regulates arthritis severity in rats.	Olofsson P, etal., Nat Genet 2003 Jan;33(1):25-32.
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:12477932	PMID:14751286	PMID:17052463	PMID:19109438	PMID:19242469	PMID:19946888	PMID:22082260	PMID:22899722	PMID:25913238	PMID:25931508

Genomics

Comparative Map Data

Gtf2i
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	28,037,344 - 28,112,677 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	28,037,853 - 28,112,677 (+)	Ensembl				GRCr8
mRatBN7.2	12	22,400,933 - 22,476,243 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	22,401,431 - 22,476,243 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	23,544,441 - 23,619,242 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	24,155,505 - 24,230,339 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	23,221,169 - 23,295,801 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	25,410,804 - 25,487,970 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	25,411,207 - 25,488,156 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	27,420,618 - 27,497,928 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	23,470,042 - 23,545,621 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	24,164,158 - 24,238,521 (+)	NCBI		Celera
RGSC_v3.1	12	23,350,478 - 23,408,833 (+)	NCBI
Cytogenetic Map	12	q12	NCBI

GTF2I
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	74,657,718 - 74,760,692 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	74,650,231 - 74,760,706 (+)	Ensembl			hg38	GRCh38
GRCh37	7	74,072,044 - 74,175,022 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	73,709,966 - 73,812,958 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	73,516,680 - 73,619,673	NCBI
Celera	7	69,551,230 - 69,623,844 (+)	NCBI		Celera
Cytogenetic Map	7	q11.23	NCBI
HuRef	7	69,950,614 - 70,053,622 (+)	NCBI		HuRef
CHM1_1	7	74,217,081 - 74,320,108 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	75,860,000 - 75,962,983 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	73,405,063 - 73,508,086 (+)	NCBI

Gtf2i
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	134,266,686 - 134,346,571 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	134,266,688 - 134,343,614 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	134,237,832 - 134,317,678 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	134,237,834 - 134,314,760 (-)	Ensembl			mm10	GRCm38
MGSCv37	5	134,713,704 - 134,790,616 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	134,522,471 - 134,599,320 (-)	NCBI		MGSCv36	mm8
Celera	5	131,241,157 - 131,318,055 (-)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	74.48	NCBI

Gtf2i
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	13,369,772 - 13,446,815 (-)	Ensembl
ChiLan1.0	NW_004955456	13,371,306 - 13,461,846 (-)	NCBI	ChiLan1.0	ChiLan1.0

GTF2I
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	90,140,935 - 90,244,241 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	138,405,564 - 138,508,873 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	7	81,816,945 - 81,903,784 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	81,831,442 - 81,901,926 (+)	Ensembl			panPan2	panpan1.1

GTF2I
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	5,726,652 - 5,840,740 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	5,727,665 - 5,811,965 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	7,428,530 - 7,541,766 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	5,543,745 - 5,657,006 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	5,543,753 - 5,656,989 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	5,535,568 - 5,648,801 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	5,482,175 - 5,596,064 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	5,644,547 - 5,758,859 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gtf2i
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	130,425,157 - 130,514,806 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	3,518,462 - 3,611,452 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	3,521,763 - 3,611,410 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GTF2I
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	11,671,575 - 11,811,423 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	11,656,928 - 11,811,426 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	11,424,644 - 11,529,984 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GTF2I
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	8,361,187 - 8,463,469 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	8,363,057 - 8,435,750 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666070	8,139,034 - 8,242,152 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gtf2i
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	13,445,872 - 13,547,056 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624740	13,446,811 - 13,547,050 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Gtf2i
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	16	19,740,660 - 19,812,779 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Gtf2i
613 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	305
Count of miRNA genes:	118
Interacting mature miRNAs:	138
Transcripts:	ENSRNOT00000002020, ENSRNOT00000040356
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	24805022	52308831	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
2306789	Ean6	Experimental allergic neuritis QTL 6	4.9		nervous system integrity trait (VT:0010566)	experimental autoimmune neuritis severity score (CMO:0001528)	12	1	29775522	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	25989355	52308831	Rat
5684888	Pia42	Pristane induced arthritis QTL 42			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	3489416	48489416	Rat
1331739	Hrtrt14	Heart rate QTL 14	3.56232		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	12	1	38687564	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	18473041	52308831	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	15264248	52308831	Rat
61331	Eau2	Experimental allergic uveoretinitis QTL 2		0.0005	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	12	1	33700600	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
2293684	Bmd26	Bone mineral density QTL 26	4.4	0.0002	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	12	1	38635130	Rat
6893681	Bw109	Body weight QTL 109	2.3	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28133365	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	12233000	30490641	Rat
61404	Bw120	Body weight QTL 120	5.1		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	12	17464979	46784661	Rat
1300174	Bw15	Body weight QTL 15	2.93		body mass (VT:0001259)	body weight loss (CMO:0001399)	12	1	28606299	Rat
1331786	Kidm11	Kidney mass QTL 11	3.571		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	12	16187438	52308831	Rat
1331787	Rf41	Renal function QTL 41	2.998		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	12	1	33700556	Rat
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	16135029	52308831	Rat
1331761	Bp218	Blood pressure QTL 218	2.973		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	16187438	51213550	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
61416	Pia4	Pristane induced arthritis QTL 4	8.4		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	12	18749469	36488809	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	41361854	Rat
61421	Cia12	Collagen induced arthritis QTL 12	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	18749469	34312613	Rat
1298081	Cia25	Collagen induced arthritis QTL 25	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	2747694	47747694	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	18473041	52308831	Rat
2303568	Bw88	Body weight QTL 88	3		body mass (VT:0001259)	body weight (CMO:0000012)	12	1	28606299	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	3087180	48087180	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	16135029	52308831	Rat
2293086	Iddm30	Insulin dependent diabetes mellitus QTL 30	3.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	7901625	33938215	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
1331755	Bp219	Blood pressure QTL 219	3.041		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	16187438	33700556	Rat

Markers in Region

BE117132

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	22,430,668 - 22,430,818 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	25,440,651 - 25,440,800	NCBI	Rnor6.0
Rnor_5.0	12	27,450,607 - 27,450,756	UniSTS	Rnor5.0
RGSC_v3.4	12	23,498,080 - 23,498,229	UniSTS	RGSC3.4
Celera	12	24,193,035 - 24,193,184	UniSTS
RH 3.4 Map	12	346.7	UniSTS
Cytogenetic Map	12	q12	UniSTS

RH143085

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	22,432,665 - 22,432,916 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	25,442,648 - 25,442,898	NCBI	Rnor6.0
Rnor_5.0	12	27,452,604 - 27,452,854	UniSTS	Rnor5.0
RGSC_v3.4	12	23,500,077 - 23,500,327	UniSTS	RGSC3.4
Celera	12	24,195,032 - 24,195,282	UniSTS
RH 3.4 Map	12	347.3	UniSTS
Cytogenetic Map	12	q12	UniSTS

RH138602

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	12	28,111,027 - 28,111,690 (+)	Marker Load Pipeline
mRatBN7.2	12	22,474,593 - 22,475,256 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	25,486,329 - 25,486,991	NCBI	Rnor6.0
Rnor_5.0	12	27,496,285 - 27,496,947	UniSTS	Rnor5.0
RGSC_v3.4	12	23,543,980 - 23,544,642	UniSTS	RGSC3.4
Celera	12	24,236,880 - 24,237,542	UniSTS
RH 3.4 Map	12	354.8	UniSTS
Cytogenetic Map	12	q12	UniSTS

BI274753

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	22,475,857 - 22,476,062 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	25,487,593 - 25,487,797	NCBI	Rnor6.0
Rnor_5.0	12	27,497,549 - 27,497,753	UniSTS	Rnor5.0
RGSC_v3.4	12	23,545,244 - 23,545,448	UniSTS	RGSC3.4
Celera	12	24,238,144 - 24,238,348	UniSTS
RH 3.4 Map	12	356.0	UniSTS
Cytogenetic Map	12	q12	UniSTS

Gtf2i

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Celera	12	24,231,405 - 24,233,916	UniSTS
Cytogenetic Map	12	q12	UniSTS

Related Rat Strains

The following Strains have been annotated to Gtf2i

DA.ACI-(D12Mit2-Gtf2i)/Nsi

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001001512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001401209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001401210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF547390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF547391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ294706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ294707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000002020 ⟹ ENSRNOP00000002020

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,873 - 28,112,668 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,465 - 22,476,234 (+)	Ensembl
Rnor_6.0 Ensembl	12	25,430,464 - 25,487,966 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000040356 ⟹ ENSRNOP00000040835

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,853 - 28,112,677 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,481 - 22,476,234 (+)	Ensembl
Rnor_6.0 Ensembl	12	25,411,292 - 25,487,978 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077189 ⟹ ENSRNOP00000073166

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,870 - 28,112,674 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,439 - 22,476,243 (+)	Ensembl
Rnor_6.0 Ensembl	12	25,411,207 - 25,488,156 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092754

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	25,469,545 - 25,469,726 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092870

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	25,481,273 - 25,483,792 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092881

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	25,484,515 - 25,485,666 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092956 ⟹ ENSRNOP00000075949

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	25,450,286 - 25,462,426 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092982 ⟹ ENSRNOP00000075956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,038,924 - 28,112,674 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,431 - 22,474,641 (+)	Ensembl
Rnor_6.0 Ensembl	12	25,435,567 - 25,462,451 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092988

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	25,475,504 - 25,480,132 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092995

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	25,477,616 - 25,478,407 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098927 ⟹ ENSRNOP00000096595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,870 - 28,112,674 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,439 - 22,476,243 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099403 ⟹ ENSRNOP00000076791

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,048,169 - 28,112,668 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,465 - 22,476,229 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099547 ⟹ ENSRNOP00000093772

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	22,468,422 - 22,476,232 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104703 ⟹ ENSRNOP00000080788

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,859 - 28,112,673 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,465 - 22,476,234 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107220 ⟹ ENSRNOP00000077117

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,853 - 28,112,677 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,465 - 22,476,234 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109966 ⟹ ENSRNOP00000095456

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	28,037,853 - 28,112,677 (+)	Ensembl
mRatBN7.2 Ensembl	12	22,401,465 - 22,476,234 (+)	Ensembl

RefSeq Acc Id:

NM_001001512 ⟹ NP_001001512

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,853 - 28,112,677 (+)	NCBI
mRatBN7.2	12	22,401,417 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,411,494 - 25,487,970 (+)	NCBI
Rnor_5.0	12	27,420,618 - 27,497,928 (+)	NCBI
RGSC_v3.4	12	23,470,042 - 23,545,621 (+)	RGD
Celera	12	24,164,158 - 24,238,521 (+)	RGD

Sequence:

show sequence

CGGCCATGCGGCGGTGACAGGAGCACGGCCGAGACGCACGAGCCCCCCTCGCCCTCTCACCTCC
ACCCCGTTCACCAGCTCGCCGAGGCCCCTCCGGCCTATATCCGCTTGCTGTCCGTATCTCCCCC
TCCCCGACCCTCCCCGGCTGCACTTCGGAAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTG
CGGAGGATGAGGAGTCTTCGGAGAGCAGGATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTC
CATGTGTAAAGAGCTGGCCAAGTCCAAGGCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGAT
GTGTTTGTCGTTGGAACCGAAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAG
ATTTTGTGAAGTATTGTGTTGAAGAAGAAGAAAAGGCCGCCGAGATGCATAAGATGAAATGTAC
AACCCAGGCCAACCGGATGAGCGTGGATGCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAG
GACTATTTCTGCTTTTGTTATGGGAAAGCCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATG
AGAAGATGCTGCGTGACCAGTCAGCTGTGGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAA
GCATCCCGAGCACTATGACCTCGCAACCTTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCC
TTCATCATCAAGAGACCTTTCCTCGAGCCGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCG
ATGCTGACAGGCCCATGCTGTCTCCGGGTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCC
CACGGAAGATTCTGATGATGATTATTCTCCACCTACCAAGAGGCCAAAGAGCAGTGAGCCGCCC
CCACCCCCACCGGTCCCAGAGCCCACCAACGCCGGCAAGCGCAAAGTGAGGGAGTTCAACTTTG
AGAAATGGAACGCGCGCATCACTGACCTACGGAAACAAGTGGAAGAATTGTTTGAAAGAAAATA
CGCTCAAGCTATAAAAGCCAAAGGCCCGGTGACGATCCCATACCCTCTTTTCCAGTCGCACGTC
GAAGATCTGTATGTAGAGGGCCTTCCTGAAGGGATCCCCTTTAGAAGGCCATCAACGTACGGCA
TTCCTCGCCTGGAGAGGATATTGCTGGCAAAGGAGAGGATCCGCTTTGTGATCAAGAAACATGA
GCTTCTGAACTCAACACGAGAAGATTTACAGCTGGACAAGCCCGCATCAGGAGTGAAGGAAGAG
TGGTATGCTCGTATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCTG
AGGCCTTGGGAAGCACAGAAGCCAAGGCTGTACCGTACCAAAAATTCGAGGCCTATCCCAATGA
TCTCTATGTGGAAGGACTTCCAGAAAACATTCCTTTCCGAAGCCCCTCATGGTATGGAATCCCA
AGACTGGAAAAAATCATCCAAGTGGGCAATCGAATTAAATTTGTTATCAAGAGACCAGAACTGC
TGACTCACAGTACAACTGAGGTGACTCAGCCACGGACGAATACGCCAGTCAAGGAAGATTGGAA
CGTCAGGATCACCAAGCTCCGCAAGCAGGTGGAGGAGATCTTTAACTTGAAGTTTGCTCAAGCT
CTTGGCCTCACAGAGGCTGTGAAGGTGCCGTATCCTGTGTTCGAATCCAACCCAGAATTTCTGT
ATGTGGAAGGGCTCCCTGAGGGGATCCCCTTCCGAAGCCCTACCTGGTTTGGGATTCCACGCCT
TGAGAGGATTGTCCGTGGGAGCAATAAGATCAAGTTTGTTGTTAAAAAGCCCGAGCTAGTTGTG
TCCTACTTGCCTCCTGGGATGGCTAGCAAAATCAACACTAAAGCATTGCAGTCCCCGAAACGAC
CACGAAGCCCTGGGAGCAACTCCAAGGTCCCTGAAATCGAGGTCACTGTGGAAGGCCCCAACAA
CAACAGTCCTCAGACCTCTACCGTTCGAACTCCTACCCAGACCAACGGTTCAAACGTTCCCTTC
AAGCCTCGAGGGAGAGAGTTTTCCTTTGAGGCCTGGAACGCTAAGATCACAGACCTGAAGCAGA
AAGTGGAGAATCTCTTCAATGAAAAGTGCGGGGAAGCTCTTGGCCTTAAGCAGGCTGTGAAAGT
ACCGTTTGCGCTATTTGAGTCCTTCCCAGAGGACTTCTACGTAGAAGGCTTACCCGAGGGCGTG
CCCTTCCGAAGACCATCCACTTTTGGCATTCCAAGGCTGGAGAAGATCCTCCGGAACAAGGCCA
AGATAAAGTTCATCATTAAAAAACCTGAGATGTTCGAGACGGCCATCAAAGAGAGCACCTCTTC
CAAAAGCCCTCCGAGGAAGACGAACTCATCCCCCAGTGTCAATACGACAGCCTCAGGTGTGGAA
GATCTTAACATCATTCAGGTGACAATCCCAGATGACGACAACGAACGACTCTCCAAAGTCGAGA
AGGCCAGGCAGCTTCGGGAGCAAGTCAACGACCTCTTCAGCCGAAAGTTTGGTGAAGCTATTGG
GATGGGCTTCCCCGTGAAGGTCCCCTACAGGAAAATCACCATCAACCCTGGCTGCGTGGTGGTC
GATGGCATGCCCCCGGGGGTGTCCTTCAAAGCCCCCAGCTATCTGGAGATCAGCTCCATGAGAA
GGATCTTAGATTCTGCTGAGTTTATCAAGTTCACTGTCATTAGACCATTCCCAGGACTGGTGAT
TAATAACCAGCTGGTTGATCAGAATGAGTCTGAAGGCCCTGTGATACAAGAATCAGCTGAGGCA
AGCCAGTTGGAAGTTCCAGCAACAGAAGAAATCAAAGAGACAGATGGGAGCTCACAGATCAAGC
AGGAGCCAGACCCCACGTGGTAGACCGTGGCTCTCCAGGTTCGGCTCCCGGCGTGAGTGGTGGA
GAAGAGCTTTCGGACCCGCTCCGGCCAGCTCTGTAATATACTTGTATAACAGAAATACCTTCTA
TACAAACCTTCTTTTCTACTTTTAGATAGAAATGTCTACTTTCTCAGCAGTTCTGTGAATTGAA
CTACATAGCGTGATGAGATGCGCGTGCCTGGCTGGCTTGGGAATGCACTAGAAGGATTTTGCAG
CAGTGCTGGAAGGAGGCGGGGATGGCAGGGACGACTCTTAGGGTTTCTCATGCATCGGGCAGAG
CCTTGGGCTGAGGGGCGTATCCCCGTCAGTGAGCTATTCCTCCAGAGCATCTTGGCTTCCGCAG
GGAAGGAAACCCCTGTGCTAGTCAGTGCGTTAGTTTTTCTATTGAAAACCAGTTCCGTGATCTT
GCACTCAGCTCCCCCTCCTGCCCAGGGGAGGGCTGCTGTCTGTGTATGTGACTAAGCCTCCTCC
CGAGTTCCATTATGAGTCCTCTGTCCTCACTGTCATTCAAAGCAAAGCCGGCCAGTGAGCAGCC
AGTGCGTCCGAGTGCAACTGGAGAGGCTGACCTCGGAGTCTCTCTCGAGGTTACTTTGCAGCAA
GTAAATTTCTGGGCGTATCCAGAAGGTCAGAGGCCAGTGGTCAGGTGTGCATGCTTGAGCAGCT
GGATGACTCAACCCTCCCTAACCACCAGGACCTGCAGTGACCTGGGGTGCTCTGGGTGGAGTCA
GGCTGGCCTTGTGTCTGCCTGGTTGGTTGTCTCTAACCACCTGTCTGGCCTCGGTGCCAGGGTG
GGGAGTGGGGTACCTTGGTGTCCTCGCCCTCTGTGGGGCTCCACGTGGGAGCTCGCAGACGATG
CCACTGTATAAGGCAGCAGCTCTCAGCAGTTAGAGGGTGTGAGGGCACCGCTCTCAGTAGCGTC
ACCACGATGTTCACCATGGGAAATTATATCACACGGTAGCAGAAATAGGCATTTTATGTGTTCC
TTATATTTTACCTCAGATTGTAGATATAGGGTAATAAATAAAATCCATCCATGCCTTTCAAAAA
AAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001401209 ⟹ NP_001388138

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,853 - 28,112,677 (+)	NCBI
mRatBN7.2	12	22,401,417 - 22,476,243 (+)	NCBI

RefSeq Acc Id:

NM_001401210 ⟹ NP_001388139

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,853 - 28,112,677 (+)	NCBI
mRatBN7.2	12	22,401,417 - 22,476,243 (+)	NCBI

RefSeq Acc Id:

XM_006249170 ⟹ XP_006249232

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,404 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,401,413 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,411,297 - 25,487,970 (+)	NCBI
Rnor_5.0	12	27,420,618 - 27,497,928 (+)	NCBI

Sequence:

show sequence

AAAAAAAAGGGGGAAAAAGGAGGAGGAGGAGGAGGGTGAGAGAGAAGCTGGGAGAGCAGAGAAA
AGGGGGCACCGGCGGCCCCCCCCCGCTTCCCTGCACGCGCTCGCCGCCCGCCTGCCGCGGTTAC
CCCTGGGCTTCGTCCCTCTGTTTCCCCCCGCGTCTGGCGACCCAGCGAGGAGCGAGGCCCCTCC
CGGGGCGGCCATGCGGCGGTGACAGGAGCACGGCCGAGACGCACGAGCCCCCCTCGCCCTCTCA
CCTCCACCCCGTTCACCAGCTCGCCGAGGCCCCTCCGGCCTATATCCGCTTGCTGTCCGTATCT
CCCCCTCCCCGACCCTCCCCGGCTGCACTTCGGAAATCATGGCCCAAGTAGCGATGTCCGCGCT
GCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAGGATGGTGGTGACGTTCCTCATGTCTGCCCTG
GAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAGGCTGAGGTGGCCTGCATCGCCGTGTATGAGA
CAGATGTGTTTGTCGTTGGAACCGAAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTTCCA
AAAAGATTTTGTGAAGTATTGTGTTGAAGAAGAAGAAAAGGCCGCCGAGATGCATAAGATGAAA
TGTACAACCCAGGCCAACCGGATGAGCGTGGATGCTGTAGAAATTGAGACCCTCAGAAAAACGG
TGGAGGACTATTTCTGCTTTTGTTATGGGAAAGCCTTAGGCAAATCCACAGTGGTCCCTGTGCC
ATATGAGAAGATGCTGCGTGACCAGTCAGCTGTGGCGGTGCAGGGGCTTCCCGAGGGGGTCGCC
TTCAAGCATCCCGAGCACTATGACCTCGCAACCTTGAAGTGGATTCTGGAGAACAAGGCGGGGA
TTTCCTTCATCATCAAGAGACCTTTCCTCGAGCCGAAGAAACACCTTGGTGGTCGAGTGATGGC
GGCCGATGCTGACAGGCCCATGCTGTCTCCGGGTGGAAGTTGTGGCCCCATCAAAGTGAAAACT
GAGCCCACGGAAGATTCTGGCATTTCTCTGGAAATGGCCGCTGTGACAGTGAAGGAGGAGTCAG
AAGACCCCGATTACTATCAGTATAACATTCAAGCAGGCCCTTCTGAAACTGATGATGTTGATGA
AAAGCTCCCCCTTTCGAAGGCTTTGCAAGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAGCG
GAAGTGGAAGTGCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGAAACCAGTGAGGACCCTG
AAGTTGAGGTGACCATTGAAGATGATGATTATTCTCCACCTACCAAGAGGCCAAAGAGCAGTGA
GCCGCCCCCACCCCCACCGGTCCCAGAGCCCACCAACGCCGGCAAGCGCAAAGTGAGGGAGTTC
AACTTTGAGAAATGGAACGCGCGCATCACTGACCTACGGAAACAAGTGGAAGAATTGTTTGAAA
GAAAATACGCTCAAGCTATAAAAGCCAAAGGCCCGGTGACGATCCCATACCCTCTTTTCCAGTC
GCACGTCGAAGATCTGTATGTAGAGGGCCTTCCTGAAGGGATCCCCTTTAGAAGGCCATCAACG
TACGGCATTCCTCGCCTGGAGAGGATATTGCTGGCAAAGGAGAGGATCCGCTTTGTGATCAAGA
AACATGAGCTTCTGAACTCAACACGAGAAGATTTACAGCTGGACAAGCCCGCATCAGGAGTGAA
GGAAGAGTGGTATGCTCGTATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAA
TTTGCTGAGGCCTTGGGAAGCACAGAAGCCAAGGCTGTACCGTACCAAAAATTCGAGGCCTATC
CCAATGATCTCTATGTGGAAGGACTTCCAGAAAACATTCCTTTCCGAAGCCCCTCATGGTATGG
AATCCCAAGACTGGAAAAAATCATCCAAGTGGGCAATCGAATTAAATTTGTTATCAAGAGACCA
GAACTGCTGACTCACAGTACAACTGAGGTGACTCAGCCACGGACGAATACGCCAGTCAAGGAAG
ATTGGAACGTCAGGATCACCAAGCTCCGCAAGCAGGTGGAGGAGATCTTTAACTTGAAGTTTGC
TCAAGCTCTTGGCCTCACAGAGGCTGTGAAGGTGCCGTATCCTGTGTTCGAATCCAACCCAGAA
TTTCTGTATGTGGAAGGGCTCCCTGAGGGGATCCCCTTCCGAAGCCCTACCTGGTTTGGGATTC
CACGCCTTGAGAGGATTGTCCGTGGGAGCAATAAGATCAAGTTTGTTGTTAAAAAGCCCGAGCT
AGTTGTGTCCTACTTGCCTCCTGGGATGGCTAGCAAAATCAACACTAAAGCATTGCAGTCCCCG
AAACGACCACGAAGCCCTGGGAGCAACTCCAAGGTCCCTGAAATCGAGGTCACTGTGGAAGGCC
CCAACAACAACAGTCCTCAGACCTCTACCGTTCGAACTCCTACCCAGACCAACGGTTCAAACGT
TCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTTGAGGCCTGGAACGCTAAGATCACAGACCTG
AAGCAGAAAGTGGAGAATCTCTTCAATGAAAAGTGCGGGGAAGCTCTTGGCCTTAAGCAGGCTG
TGAAAGTACCGTTTGCGCTATTTGAGTCCTTCCCAGAGGACTTCTACGTAGAAGGCTTACCCGA
GGGCGTGCCCTTCCGAAGACCATCCACTTTTGGCATTCCAAGGCTGGAGAAGATCCTCCGGAAC
AAGGCCAAGATAAAGTTCATCATTAAAAAACCTGAGATGTTCGAGACGGCCATCAAAGAGAGCA
CCTCTTCCAAAAGCCCTCCGAGGAAGACGAACTCATCCCCCAGTGTCAATACGACAGCCTCAGG
TGTGGAAGATCTTAACATCATTCAGGTGACAATCCCAGATGACGACAACGAACGACTCTCCAAA
GTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGTCAACGACCTCTTCAGCCGAAAGTTTGGTGAAG
CTATTGGGATGGGCTTCCCCGTGAAGGTCCCCTACAGGAAAATCACCATCAACCCTGGCTGCGT
GGTGGTCGATGGCATGCCCCCGGGGGTGTCCTTCAAAGCCCCCAGCTATCTGGAGATCAGCTCC
ATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAAGTTCACTGTCATTAGACCATTCCCAGGAC
TGGTGATTAATAACCAGCTGGTTGATCAGAATGAGTCTGAAGGCCCTGTGATACAAGAATCAGC
TGAGGCAAGCCAGTTGGAAGTTCCAGCAACAGAAGAAATCAAAGAGACAGATGGGAGCTCACAG
ATCAAGCAGGAGCCAGACCCCACGTGGTAGACCGTGGCTCTCCAGGTTCGGCTCCCGGCGTGAG
TGGTGGAGAAGAGCTTTCGGACCCGCTCCGGCCAGCTCTGTAATATACTTGTATAACAGAAATA
CCTTCTATACAAACCTTCTTTTCTACTTTTAGATAGAAATGTCTACTTTCTCAGCAGTTCTGTG
AATTGAACTACATAGCGTGATGAGATGCGCGTGCCTGGCTGGCTTGGGAATGCACTAGAAGGAT
TTTGCAGCAGTGCTGGAAGGAGGCGGGGATGGCAGGGACGACTCTTAGGGTTTCTCATGCATCG
GGCAGAGCCTTGGGCTGAGGGGCGTATCCCCGTCAGTGAGCTATTCCTCCAGAGCATCTTGGCT
TCCGCAGGGAAGGAAACCCCTGTGCTAGTCAGTGCGTTAGTTTTTCTATTGAAAACCAGTTCCG
TGATCTTGCACTCAGCTCCCCCTCCTGCCCAGGGGAGGGCTGCTGTCTGTGTATGTGACTAAGC
CTCCTCCCGAGTTCCATTATGAGTCCTCTGTCCTCACTGTCATTCAAAGCAAAGCCGGCCAGTG
AGCAGCCAGTGCGTCCGAGTGCAACTGGAGAGGCTGACCTCGGAGTCTCTCTCGAGGTTACTTT
GCAGCAAGTAAATTTCTGGGCGTATCCAGAAGGTCAGAGGCCAGTGGTCAGGTGTGCATGCTTG
AGCAGCTGGATGACTCAACCCTCCCTAACCACCAGGACCTGCAGTGACCTGGGGTGCTCTGGGT
GGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTGGTTGTCTCTAACCACCTGTCTGGCCTCGGTGC
CAGGGTGGGGAGTGGGGTACCTTGGTGTCCTCGCCCTCTGTGGGGCTCCACGTGGGAGCTCGCA
GACGATGCCACTGTATAAGGCAGCAGCTCTCAGCAGTTAGAGGGTGTGAGGGCACCGCTCTCAG
TAGCGTCACCACGATGTTCACCATGGGAAATTATATCACACGGTAGCAGAAATAGGCATTTTAT
GTGTTCCTTATATTTTACCTCAGATTGTAGATATAGGGTAATAAATAAAATCCATCCATGCCTT
TCA

hide sequence

RefSeq Acc Id:

XM_008769141 ⟹ XP_008767363

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,357 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,400,933 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,410,804 - 25,487,970 (+)	NCBI

Sequence:

show sequence

GGGGGACTTCCCTCGGCAAAACAGGAAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGG
AGGATGAGGAGTCTTCGGAGAGCAGGATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCAT
GTGTAAAGAGCTGGCCAAGTCCAAGGCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTG
TTTGTCGTTGGAACCGAAAGAGGGCGTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATT
TTGTGAAGTATTGTGTTGAAGAAGAAGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAAC
CCAGGCCAACCGGATGAGCGTGGATGCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGAC
TATTTCTGCTTTTGTTATGGGAAAGCCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGA
AGATGCTGCGTGACCAGTCAGCTGTGGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCA
TCCCGAGCACTATGACCTCGCAACCTTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTC
ATCATCAAGAGACCTTTCCTCGAGCCGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATG
CTGACAGGCCCATGCTGTCTCCGGGTGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCAC
GGAAGATTCTGGCATTTCTCTGGAAATGGCCGCTGTGACAGTGAAGGAGGAGTCAGAAGACCCC
GATTACTATCAGTATAACATTCAAGCAGGCCCTTCTGAAACTGATGATGTTGATGAAAAGCTCC
CCCTTTCGAAGGCTTTGCAAGGAAGCCATCACTCCTCAGAAGGCAACGAGGGAGCGGAAGTGGA
AGTGCCAGCAGAAGATTCTACTCAACATGTCCCTTCAGAAACCAGTGAGGACCCTGAAGTTGAG
GTGACCATTGAAGATGATGATTATTCTCCACCTACCAAGAGGCCAAAGAGCAGTGAGCCGCCCC
CACCCCCACCGGTCCCAGAGCCCACCAACGCCGGCAAGCGCAAAGTGAGGGAGTTCAACTTTGA
GAAATGGAACGCGCGCATCACTGACCTACGGAAACAAGTGGAAGAATTGTTTGAAAGAAAATAC
GCTCAAGCTATAAAAGCCAAAGGCCCGGTGACGATCCCATACCCTCTTTTCCAGTCGCACGTCG
AAGATCTGTATGTAGAGGGCCTTCCTGAAGGGATCCCCTTTAGAAGGCCATCAACGTACGGCAT
TCCTCGCCTGGAGAGGATATTGCTGGCAAAGGAGAGGATCCGCTTTGTGATCAAGAAACATGAG
CTTCTGAACTCAACACGAGAAGATTTACAGCTGGACAAGCCCGCATCAGGAGTGAAGGAAGAGT
GGTATGCTCGTATCACCAAACTGAGGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCTGA
GGCCTTGGGAAGCACAGAAGCCAAGGCTGTACCGTACCAAAAATTCGAGGCCTATCCCAATGAT
CTCTATGTGGAAGGACTTCCAGAAAACATTCCTTTCCGAAGCCCCTCATGGTATGGAATCCCAA
GACTGGAAAAAATCATCCAAGTGGGCAATCGAATTAAATTTGTTATCAAGAGACCAGAACTGCT
GACTCACAGTACAACTGAGGTGACTCAGCCACGGACGAATACGCCAGTCAAGGAAGATTGGAAC
GTCAGGATCACCAAGCTCCGCAAGCAGGTGGAGGAGATCTTTAACTTGAAGTTTGCTCAAGCTC
TTGGCCTCACAGAGGCTGTGAAGGTGCCGTATCCTGTGTTCGAATCCAACCCAGAATTTCTGTA
TGTGGAAGGGCTCCCTGAGGGGATCCCCTTCCGAAGCCCTACCTGGTTTGGGATTCCACGCCTT
GAGAGGATTGTCCGTGGGAGCAATAAGATCAAGTTTGTTGTTAAAAAGCCCGAGCTAGTTGTGT
CCTACTTGCCTCCTGGGATGGCTAGCAAAATCAACACTAAAGCATTGCAGTCCCCGAAACGACC
ACGAAGCCCTGGGAGCAACTCCAAGGTCCCTGAAATCGAGGTCACTGTGGAAGGCCCCAACAAC
AACAGTCCTCAGACCTCTACCGTTCGAACTCCTACCCAGACCAACGGTTCAAACGTTCCCTTCA
AGCCTCGAGGGAGAGAGTTTTCCTTTGAGGCCTGGAACGCTAAGATCACAGACCTGAAGCAGAA
AGTGGAGAATCTCTTCAATGAAAAGTGCGGGGAAGCTCTTGGCCTTAAGCAGGCTGTGAAAGTA
CCGTTTGCGCTATTTGAGTCCTTCCCAGAGGACTTCTACGTAGAAGGCTTACCCGAGGGCGTGC
CCTTCCGAAGACCATCCACTTTTGGCATTCCAAGGCTGGAGAAGATCCTCCGGAACAAGGCCAA
GATAAAGTTCATCATTAAAAAACCTGAGATGTTCGAGACGGCCATCAAAGAGAGCACCTCTTCC
AAAAGCCCTCCGAGGAAGACGAACTCATCCCCCAGTGTCAATACGACAGCCTCAGGTGTGGAAG
ATCTTAACATCATTCAGGTGACAATCCCAGATGACGACAACGAACGACTCTCCAAAGTCGAGAA
GGCCAGGCAGCTTCGGGAGCAAGTCAACGACCTCTTCAGCCGAAAGTTTGGTGAAGCTATTGGG
ATGGGCTTCCCCGTGAAGGTCCCCTACAGGAAAATCACCATCAACCCTGGCTGCGTGGTGGTCG
ATGGCATGCCCCCGGGGGTGTCCTTCAAAGCCCCCAGCTATCTGGAGATCAGCTCCATGAGAAG
GATCTTAGATTCTGCTGAGTTTATCAAGTTCACTGTCATTAGACCATTCCCAGGACTGGTGATT
AATAACCAGCTGGTTGATCAGAATGAGTCTGAAGGCCCTGTGATACAAGAATCAGCTGAGGCAA
GCCAGTTGGAAGTTCCAGCAACAGAAGAAATCAAAGAGACAGATGGGAGCTCACAGATCAAGCA
GGAGCCAGACCCCACGTGGTAGACCGTGGCTCTCCAGGTTCGGCTCCCGGCGTGAGTGGTGGAG
AAGAGCTTTCGGACCCGCTCCGGCCAGCTCTGTAATATACTTGTATAACAGAAATACCTTCTAT
ACAAACCTTCTTTTCTACTTTTAGATAGAAATGTCTACTTTCTCAGCAGTTCTGTGAATTGAAC
TACATAGCGTGATGAGATGCGCGTGCCTGGCTGGCTTGGGAATGCACTAGAAGGATTTTGCAGC
AGTGCTGGAAGGAGGCGGGGATGGCAGGGACGACTCTTAGGGTTTCTCATGCATCGGGCAGAGC
CTTGGGCTGAGGGGCGTATCCCCGTCAGTGAGCTATTCCTCCAGAGCATCTTGGCTTCCGCAGG
GAAGGAAACCCCTGTGCTAGTCAGTGCGTTAGTTTTTCTATTGAAAACCAGTTCCGTGATCTTG
CACTCAGCTCCCCCTCCTGCCCAGGGGAGGGCTGCTGTCTGTGTATGTGACTAAGCCTCCTCCC
GAGTTCCATTATGAGTCCTCTGTCCTCACTGTCATTCAAAGCAAAGCCGGCCAGTGAGCAGCCA
GTGCGTCCGAGTGCAACTGGAGAGGCTGACCTCGGAGTCTCTCTCGAGGTTACTTTGCAGCAAG
TAAATTTCTGGGCGTATCCAGAAGGTCAGAGGCCAGTGGTCAGGTGTGCATGCTTGAGCAGCTG
GATGACTCAACCCTCCCTAACCACCAGGACCTGCAGTGACCTGGGGTGCTCTGGGTGGAGTCAG
GCTGGCCTTGTGTCTGCCTGGTTGGTTGTCTCTAACCACCTGTCTGGCCTCGGTGCCAGGGTGG
GGAGTGGGGTACCTTGGTGTCCTCGCCCTCTGTGGGGCTCCACGTGGGAGCTCGCAGACGATGC
CACTGTATAAGGCAGCAGCTCTCAGCAGTTAGAGGGTGTGAGGGCACCGCTCTCAGTAGCGTCA
CCACGATGTTCACCATGGGAAATTATATCACACGGTAGCAGAAATAGGCATTTTATGTGTTCCT
TATATTTTACCTCAGATTGTAGATATAGGGTAATAAATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_017598360 ⟹ XP_017453849

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,420,772 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,430,459 - 25,487,970 (+)	NCBI

Sequence:

show sequence

AAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAG
GATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAG
GCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTGTTTGTCGTTGGAACCGAAAGAGGGC
GTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATTTTGTGAAGTATTGTGTTGAAGAAGA
AGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAACCCAGGCCAACCGGATGAGCGTGGAT
GCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGACTATTTCTGCTTTTGTTATGGGAAAG
CCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGAAGATGCTGCGTGACCAGTCAGCTGT
GGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCATCCCGAGCACTATGACCTCGCAACC
TTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTCATCATCAAGAGACCTTTCCTCGAGC
CGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATGCTGACAGGCCCATGCTGTCTCCGGG
TGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCACGGAAGATTCTGGCATTTCTCTGGAA
ATGGCCGCTGTGACAGTGAAGGAGGAGTCAGAAGACCCCGATTACTATCAGTATAACATTCAAG
GCCCTTCTGAAACTGATGATGTTGATGAAAAGCTCCCCCTTTCGAAGGCTTTGCAAGGAAGCCA
TCACTCCTCAGAAGGCAACGAGGGAGCGGAAGTGGAAGTGCCAGCAGAAGATTCTACTCAACAT
GTCCCTTCAGAAACCAGTGAGGACCCTGAAGTTGAGGTGACCATTGAAGATGATGATTATTCTC
CACCTACCAAGAGGCCAAAGAGCAGTGAGCCGCCCCCACCCCCACCGGTCCCAGAGCCCACCAA
CGCCGGCAAGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAACGCGCGCATCACTGACCTA
CGGAAACAAGTGGAAGAATTGTTTGAAAGAAAATACGCTCAAGCTATAAAAGCCAAAGGCCCGG
TGACGATCCCATACCCTCTTTTCCAGTCGCACGTCGAAGATCTGTATGTAGAGGGCCTTCCTGA
AGGGATCCCCTTTAGAAGGCCATCAACGTACGGCATTCCTCGCCTGGAGAGGATATTGCTGGCA
AAGGAGAGGATCCGCTTTGTGATCAAGAAACATGAGCTTCTGAACTCAACACGAGAAGATTTAC
AGCTGGACAAGCCCGCATCAGGAGTGAAGGAAGAGTGGTATGCTCGTATCACCAAACTGAGGAA
GATGGTTGACCAGCTCTTCTGCAAGAAATTTGCTGAGGCCTTGGGAAGCACAGAAGCCAAGGCT
GTACCGTACCAAAAATTCGAGGCCTATCCCAATGATCTCTATGTGGAAGGACTTCCAGAAAACA
TTCCTTTCCGAAGCCCCTCATGGTATGGAATCCCAAGACTGGAAAAAATCATCCAAGTGGGCAA
TCGAATTAAATTTGTTATCAAGAGACCAGAACTGCTGACTCACAGTACAACTGAGGTGACTCAG
CCACGGACGAATACGCCAGTCAAGGAAGATTGGAACGTCAGGATCACCAAGCTCCGCAAGCAGG
TGGAGGAGATCTTTAACTTGAAGTTTGCTCAAGCTCTTGGCCTCACAGAGGCTGTGAAGGTGCC
GTATCCTGTGTTCGAATCCAACCCAGAATTTCTGTATGTGGAAGGGCTCCCTGAGGGGATCCCC
TTCCGAAGCCCTACCTGGTTTGGGATTCCACGCCTTGAGAGGATTGTCCGTGGGAGCAATAAGA
TCAAGTTTGTTGTTAAAAAGCCCGAGCTAGTTGTGTCCTACTTGCCTCCTGGGATGGCTAGCAA
AATCAACACTAAAGCATTGCAGTCCCCGAAACGACCACGAAGCCCTGGGAGCAACTCCAAGGTC
CCTGAAATCGAGGTCACTGTGGAAGGCCCCAACAACAACAGTCCTCAGACCTCTACCGTTCGAA
CTCCTACCCAGACCAACGGTTCAAACGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTTGA
GGCCTGGAACGCTAAGATCACAGACCTGAAGCAGAAAGTGGAGAATCTCTTCAATGAAAAGTGC
GGGGAAGCTCTTGGCCTTAAGCAGGCTGTGAAAGTACCGTTTGCGCTATTTGAGTCCTTCCCAG
AGGACTTCTACGTAGAAGGCTTACCCGAGGGCGTGCCCTTCCGAAGACCATCCACTTTTGGCAT
TCCAAGGCTGGAGAAGATCCTCCGGAACAAGGCCAAGATAAAGTTCATCATTAAAAAACCTGAG
ATGTTCGAGACGGCCATCAAAGAGAGCACCTCTTCCAAAAGCCCTCCGAGGAAGACGAACTCAT
CCCCCAGTGTCAATACGACAGCCTCAGGTGTGGAAGATCTTAACATCATTCAGGTGACAATCCC
AGATGACGACAACGAACGACTCTCCAAAGTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGTCAAC
GACCTCTTCAGCCGAAAGTTTGGTGAAGCTATTGGGATGGGCTTCCCCGTGAAGGTCCCCTACA
GGAAAATCACCATCAACCCTGGCTGCGTGGTGGTCGATGGCATGCCCCCGGGGGTGTCCTTCAA
AGCCCCCAGCTATCTGGAGATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAAG
TTCACTGTCATTAGACCATTCCCAGGACTGGTGATTAATAACCAGCTGGTTGATCAGAATGAGT
CTGAAGGCCCTGTGATACAAGAATCAGCTGAGGCAAGCCAGTTGGAAGTTCCAGCAACAGAAGA
AATCAAAGAGACAGATGGGAGCTCACAGATCAAGCAGGAGCCAGACCCCACGTGGTAGACCGTG
GCTCTCCAGGTTCGGCTCCCGGCGTGAGTGGTGGAGAAGAGCTTTCGGACCCGCTCCGGCCAGC
TCTGTAATATACTTGTATAACAGAAATACCTTCTATACAAACCTTCTTTTCTACTTTTAGATAG
AAATGTCTACTTTCTCAGCAGTTCTGTGAATTGAACTACATAGCGTGATGAGATGCGCGTGCCT
GGCTGGCTTGGGAATGCACTAGAAGGATTTTGCAGCAGTGCTGGAAGGAGGCGGGGATGGCAGG
GACGACTCTTAGGGTTTCTCATGCATCGGGCAGAGCCTTGGGCTGAGGGGCGTATCCCCGTCAG
TGAGCTATTCCTCCAGAGCATCTTGGCTTCCGCAGGGAAGGAAACCCCTGTGCTAGTCAGTGCG
TTAGTTTTTCTATTGAAAACCAGTTCCGTGATCTTGCACTCAGCTCCCCCTCCTGCCCAGGGGA
GGGCTGCTGTCTGTGTATGTGACTAAGCCTCCTCCCGAGTTCCATTATGAGTCCTCTGTCCTCA
CTGTCATTCAAAGCAAAGCCGGCCAGTGAGCAGCCAGTGCGTCCGAGTGCAACTGGAGAGGCTG
ACCTCGGAGTCTCTCTCGAGGTTACTTTGCAGCAAGTAAATTTCTGGGCGTATCCAGAAGGTCA
GAGGCCAGTGGTCAGGTGTGCATGCTTGAGCAGCTGGATGACTCAACCCTCCCTAACCACCAGG
ACCTGCAGTGACCTGGGGTGCTCTGGGTGGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTGGTTG
TCTCTAACCACCTGTCTGGCCTCGGTGCCAGGGTGGGGAGTGGGGTACCTTGGTGTCCTCGCCC
TCTGTGGGGCTCCACGTGGGAGCTCGCAGACGATGCCACTGTATAAGGCAGCAGCTCTCAGCAG
TTAGAGGGTGTGAGGGCACCGCTCTCAGTAGCGTCACCACGATGTTCACCATGGGAAATTATAT
CACACGGTAGCAGAAATAGGCATTTTATGTGTTCCTTATATTTTACCTCAGATTGTAGATATAG
GGTAATAAATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_017598362 ⟹ XP_017453851

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,420,772 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,430,459 - 25,487,970 (+)	NCBI

Sequence:

show sequence

AAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAG
GATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAG
GCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTGTTTGTCGTTGGAACCGAAAGAGGGC
GTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATTTTGTGAAGTATTGTGTTGAAGAAGA
AGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAACCCAGGCCAACCGGATGAGCGTGGAT
GCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGACTATTTCTGCTTTTGTTATGGGAAAG
CCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGAAGATGCTGCGTGACCAGTCAGCTGT
GGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCATCCCGAGCACTATGACCTCGCAACC
TTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTCATCATCAAGAGACCTTTCCTCGAGC
CGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATGCTGACAGGCCCATGCTGTCTCCGGG
TGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCACGGAAGATTCTGGCATTTCTCTGGAA
ATGGCCGCTGTGACAGTGAAGGAGGAGTCAGAAGACCCCGATTACTATCAGTATAACATTCAAG
CAGGCCCTTCTGAAACTGATGATGTTGATGAAAAGCTCCCCCTTTCGAAGGCTTTGCAAGGAAG
CCATCACTCCTCAGAAGGCAACGAGGGAGCGGAAGTGGAAGTGCCAGCAGAAGATGATGATTAT
TCTCCACCTACCAAGAGGCCAAAGAGCAGTGAGCCGCCCCCACCCCCACCGGTCCCAGAGCCCA
CCAACGCCGGCAAGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAACGCGCGCATCACTGA
CCTACGGAAACAAGTGGAAGAATTGTTTGAAAGAAAATACGCTCAAGCTATAAAAGCCAAAGGC
CCGGTGACGATCCCATACCCTCTTTTCCAGTCGCACGTCGAAGATCTGTATGTAGAGGGCCTTC
CTGAAGGGATCCCCTTTAGAAGGCCATCAACGTACGGCATTCCTCGCCTGGAGAGGATATTGCT
GGCAAAGGAGAGGATCCGCTTTGTGATCAAGAAACATGAGCTTCTGAACTCAACACGAGAAGAT
TTACAGCTGGACAAGCCCGCATCAGGAGTGAAGGAAGAGTGGTATGCTCGTATCACCAAACTGA
GGAAGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCTGAGGCCTTGGGAAGCACAGAAGCCAA
GGCTGTACCGTACCAAAAATTCGAGGCCTATCCCAATGATCTCTATGTGGAAGGACTTCCAGAA
AACATTCCTTTCCGAAGCCCCTCATGGTATGGAATCCCAAGACTGGAAAAAATCATCCAAGTGG
GCAATCGAATTAAATTTGTTATCAAGAGACCAGAACTGCTGACTCACAGTACAACTGAGGTGAC
TCAGCCACGGACGAATACGCCAGTCAAGGAAGATTGGAACGTCAGGATCACCAAGCTCCGCAAG
CAGGTGGAGGAGATCTTTAACTTGAAGTTTGCTCAAGCTCTTGGCCTCACAGAGGCTGTGAAGG
TGCCGTATCCTGTGTTCGAATCCAACCCAGAATTTCTGTATGTGGAAGGGCTCCCTGAGGGGAT
CCCCTTCCGAAGCCCTACCTGGTTTGGGATTCCACGCCTTGAGAGGATTGTCCGTGGGAGCAAT
AAGATCAAGTTTGTTGTTAAAAAGCCCGAGCTAGTTGTGTCCTACTTGCCTCCTGGGATGGCTA
GCAAAATCAACACTAAAGCATTGCAGTCCCCGAAACGACCACGAAGCCCTGGGAGCAACTCCAA
GGTCCCTGAAATCGAGGTCACTGTGGAAGGCCCCAACAACAACAGTCCTCAGACCTCTACCGTT
CGAACTCCTACCCAGACCAACGGTTCAAACGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCT
TTGAGGCCTGGAACGCTAAGATCACAGACCTGAAGCAGAAAGTGGAGAATCTCTTCAATGAAAA
GTGCGGGGAAGCTCTTGGCCTTAAGCAGGCTGTGAAAGTACCGTTTGCGCTATTTGAGTCCTTC
CCAGAGGACTTCTACGTAGAAGGCTTACCCGAGGGCGTGCCCTTCCGAAGACCATCCACTTTTG
GCATTCCAAGGCTGGAGAAGATCCTCCGGAACAAGGCCAAGATAAAGTTCATCATTAAAAAACC
TGAGATGTTCGAGACGGCCATCAAAGAGAGCACCTCTTCCAAAAGCCCTCCGAGGAAGACGAAC
TCATCCCCCAGTGTCAATACGACAGCCTCAGGTGTGGAAGATCTTAACATCATTCAGGTGACAA
TCCCAGATGACGACAACGAACGACTCTCCAAAGTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGT
CAACGACCTCTTCAGCCGAAAGTTTGGTGAAGCTATTGGGATGGGCTTCCCCGTGAAGGTCCCC
TACAGGAAAATCACCATCAACCCTGGCTGCGTGGTGGTCGATGGCATGCCCCCGGGGGTGTCCT
TCAAAGCCCCCAGCTATCTGGAGATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTAT
CAAGTTCACTGTCATTAGACCATTCCCAGGACTGGTGATTAATAACCAGCTGGTTGATCAGAAT
GAGTCTGAAGGCCCTGTGATACAAGAATCAGCTGAGGCAAGCCAGTTGGAAGTTCCAGCAACAG
AAGAAATCAAAGAGACAGATGGGAGCTCACAGATCAAGCAGGAGCCAGACCCCACGTGGTAGAC
CGTGGCTCTCCAGGTTCGGCTCCCGGCGTGAGTGGTGGAGAAGAGCTTTCGGACCCGCTCCGGC
CAGCTCTGTAATATACTTGTATAACAGAAATACCTTCTATACAAACCTTCTTTTCTACTTTTAG
ATAGAAATGTCTACTTTCTCAGCAGTTCTGTGAATTGAACTACATAGCGTGATGAGATGCGCGT
GCCTGGCTGGCTTGGGAATGCACTAGAAGGATTTTGCAGCAGTGCTGGAAGGAGGCGGGGATGG
CAGGGACGACTCTTAGGGTTTCTCATGCATCGGGCAGAGCCTTGGGCTGAGGGGCGTATCCCCG
TCAGTGAGCTATTCCTCCAGAGCATCTTGGCTTCCGCAGGGAAGGAAACCCCTGTGCTAGTCAG
TGCGTTAGTTTTTCTATTGAAAACCAGTTCCGTGATCTTGCACTCAGCTCCCCCTCCTGCCCAG
GGGAGGGCTGCTGTCTGTGTATGTGACTAAGCCTCCTCCCGAGTTCCATTATGAGTCCTCTGTC
CTCACTGTCATTCAAAGCAAAGCCGGCCAGTGAGCAGCCAGTGCGTCCGAGTGCAACTGGAGAG
GCTGACCTCGGAGTCTCTCTCGAGGTTACTTTGCAGCAAGTAAATTTCTGGGCGTATCCAGAAG
GTCAGAGGCCAGTGGTCAGGTGTGCATGCTTGAGCAGCTGGATGACTCAACCCTCCCTAACCAC
CAGGACCTGCAGTGACCTGGGGTGCTCTGGGTGGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTG
GTTGTCTCTAACCACCTGTCTGGCCTCGGTGCCAGGGTGGGGAGTGGGGTACCTTGGTGTCCTC
GCCCTCTGTGGGGCTCCACGTGGGAGCTCGCAGACGATGCCACTGTATAAGGCAGCAGCTCTCA
GCAGTTAGAGGGTGTGAGGGCACCGCTCTCAGTAGCGTCACCACGATGTTCACCATGGGAAATT
ATATCACACGGTAGCAGAAATAGGCATTTTATGTGTTCCTTATATTTTACCTCAGATTGTAGAT
ATAGGGTAATAAATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_017598363 ⟹ XP_017453852

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,420,772 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,430,459 - 25,487,970 (+)	NCBI

Sequence:

show sequence

AAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAG
GATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAG
GCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTGTTTGTCGTTGGAACCGAAAGAGGGC
GTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATTTTGTGAAGTATTGTGTTGAAGAAGA
AGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAACCCAGGCCAACCGGATGAGCGTGGAT
GCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGACTATTTCTGCTTTTGTTATGGGAAAG
CCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGAAGATGCTGCGTGACCAGTCAGCTGT
GGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCATCCCGAGCACTATGACCTCGCAACC
TTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTCATCATCAAGAGACCTTTCCTCGAGC
CGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATGCTGACAGGCCCATGCTGTCTCCGGG
TGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCACGGAAGATTCTGGCATTTCTCTGGAA
ATGGCCGCTGTGACAGTGAAGGAGGAGTCAGAAGACCCCGATTACTATCAGTATAACATTCAAG
GCCCTTCTGAAACTGATGATGTTGATGAAAAGCTCCCCCTTTCGAAGGCTTTGCAAGGAAGCCA
TCACTCCTCAGAAGGCAACGAGGGAGCGGAAGTGGAAGTGCCAGCAGAAGATGATGATTATTCT
CCACCTACCAAGAGGCCAAAGAGCAGTGAGCCGCCCCCACCCCCACCGGTCCCAGAGCCCACCA
ACGCCGGCAAGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAACGCGCGCATCACTGACCT
ACGGAAACAAGTGGAAGAATTGTTTGAAAGAAAATACGCTCAAGCTATAAAAGCCAAAGGCCCG
GTGACGATCCCATACCCTCTTTTCCAGTCGCACGTCGAAGATCTGTATGTAGAGGGCCTTCCTG
AAGGGATCCCCTTTAGAAGGCCATCAACGTACGGCATTCCTCGCCTGGAGAGGATATTGCTGGC
AAAGGAGAGGATCCGCTTTGTGATCAAGAAACATGAGCTTCTGAACTCAACACGAGAAGATTTA
CAGCTGGACAAGCCCGCATCAGGAGTGAAGGAAGAGTGGTATGCTCGTATCACCAAACTGAGGA
AGATGGTTGACCAGCTCTTCTGCAAGAAATTTGCTGAGGCCTTGGGAAGCACAGAAGCCAAGGC
TGTACCGTACCAAAAATTCGAGGCCTATCCCAATGATCTCTATGTGGAAGGACTTCCAGAAAAC
ATTCCTTTCCGAAGCCCCTCATGGTATGGAATCCCAAGACTGGAAAAAATCATCCAAGTGGGCA
ATCGAATTAAATTTGTTATCAAGAGACCAGAACTGCTGACTCACAGTACAACTGAGGTGACTCA
GCCACGGACGAATACGCCAGTCAAGGAAGATTGGAACGTCAGGATCACCAAGCTCCGCAAGCAG
GTGGAGGAGATCTTTAACTTGAAGTTTGCTCAAGCTCTTGGCCTCACAGAGGCTGTGAAGGTGC
CGTATCCTGTGTTCGAATCCAACCCAGAATTTCTGTATGTGGAAGGGCTCCCTGAGGGGATCCC
CTTCCGAAGCCCTACCTGGTTTGGGATTCCACGCCTTGAGAGGATTGTCCGTGGGAGCAATAAG
ATCAAGTTTGTTGTTAAAAAGCCCGAGCTAGTTGTGTCCTACTTGCCTCCTGGGATGGCTAGCA
AAATCAACACTAAAGCATTGCAGTCCCCGAAACGACCACGAAGCCCTGGGAGCAACTCCAAGGT
CCCTGAAATCGAGGTCACTGTGGAAGGCCCCAACAACAACAGTCCTCAGACCTCTACCGTTCGA
ACTCCTACCCAGACCAACGGTTCAAACGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTTG
AGGCCTGGAACGCTAAGATCACAGACCTGAAGCAGAAAGTGGAGAATCTCTTCAATGAAAAGTG
CGGGGAAGCTCTTGGCCTTAAGCAGGCTGTGAAAGTACCGTTTGCGCTATTTGAGTCCTTCCCA
GAGGACTTCTACGTAGAAGGCTTACCCGAGGGCGTGCCCTTCCGAAGACCATCCACTTTTGGCA
TTCCAAGGCTGGAGAAGATCCTCCGGAACAAGGCCAAGATAAAGTTCATCATTAAAAAACCTGA
GATGTTCGAGACGGCCATCAAAGAGAGCACCTCTTCCAAAAGCCCTCCGAGGAAGACGAACTCA
TCCCCCAGTGTCAATACGACAGCCTCAGGTGTGGAAGATCTTAACATCATTCAGGTGACAATCC
CAGATGACGACAACGAACGACTCTCCAAAGTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGTCAA
CGACCTCTTCAGCCGAAAGTTTGGTGAAGCTATTGGGATGGGCTTCCCCGTGAAGGTCCCCTAC
AGGAAAATCACCATCAACCCTGGCTGCGTGGTGGTCGATGGCATGCCCCCGGGGGTGTCCTTCA
AAGCCCCCAGCTATCTGGAGATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAA
GTTCACTGTCATTAGACCATTCCCAGGACTGGTGATTAATAACCAGCTGGTTGATCAGAATGAG
TCTGAAGGCCCTGTGATACAAGAATCAGCTGAGGCAAGCCAGTTGGAAGTTCCAGCAACAGAAG
AAATCAAAGAGACAGATGGGAGCTCACAGATCAAGCAGGAGCCAGACCCCACGTGGTAGACCGT
GGCTCTCCAGGTTCGGCTCCCGGCGTGAGTGGTGGAGAAGAGCTTTCGGACCCGCTCCGGCCAG
CTCTGTAATATACTTGTATAACAGAAATACCTTCTATACAAACCTTCTTTTCTACTTTTAGATA
GAAATGTCTACTTTCTCAGCAGTTCTGTGAATTGAACTACATAGCGTGATGAGATGCGCGTGCC
TGGCTGGCTTGGGAATGCACTAGAAGGATTTTGCAGCAGTGCTGGAAGGAGGCGGGGATGGCAG
GGACGACTCTTAGGGTTTCTCATGCATCGGGCAGAGCCTTGGGCTGAGGGGCGTATCCCCGTCA
GTGAGCTATTCCTCCAGAGCATCTTGGCTTCCGCAGGGAAGGAAACCCCTGTGCTAGTCAGTGC
GTTAGTTTTTCTATTGAAAACCAGTTCCGTGATCTTGCACTCAGCTCCCCCTCCTGCCCAGGGG
AGGGCTGCTGTCTGTGTATGTGACTAAGCCTCCTCCCGAGTTCCATTATGAGTCCTCTGTCCTC
ACTGTCATTCAAAGCAAAGCCGGCCAGTGAGCAGCCAGTGCGTCCGAGTGCAACTGGAGAGGCT
GACCTCGGAGTCTCTCTCGAGGTTACTTTGCAGCAAGTAAATTTCTGGGCGTATCCAGAAGGTC
AGAGGCCAGTGGTCAGGTGTGCATGCTTGAGCAGCTGGATGACTCAACCCTCCCTAACCACCAG
GACCTGCAGTGACCTGGGGTGCTCTGGGTGGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTGGTT
GTCTCTAACCACCTGTCTGGCCTCGGTGCCAGGGTGGGGAGTGGGGTACCTTGGTGTCCTCGCC
CTCTGTGGGGCTCCACGTGGGAGCTCGCAGACGATGCCACTGTATAAGGCAGCAGCTCTCAGCA
GTTAGAGGGTGTGAGGGCACCGCTCTCAGTAGCGTCACCACGATGTTCACCATGGGAAATTATA
TCACACGGTAGCAGAAATAGGCATTTTATGTGTTCCTTATATTTTACCTCAGATTGTAGATATA
GGGTAATAAATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_017598366 ⟹ XP_017453855

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,057,211 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,420,772 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,430,459 - 25,487,970 (+)	NCBI

Sequence:

show sequence

AAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAG
GATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAG
GCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTGTTTGTCGTTGGAACCGAAAGAGGGC
GTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATTTTGTGAAGTATTGTGTTGAAGAAGA
AGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAACCCAGGCCAACCGGATGAGCGTGGAT
GCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGACTATTTCTGCTTTTGTTATGGGAAAG
CCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGAAGATGCTGCGTGACCAGTCAGCTGT
GGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCATCCCGAGCACTATGACCTCGCAACC
TTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTCATCATCAAGAGACCTTTCCTCGAGC
CGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATGCTGACAGGCCCATGCTGTCTCCGGG
TGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCACGGAAGATTCTGGAAGCCATCACTCC
TCAGAAGGCAACGAGGGAGCGGAAGTGGAAGTGCCAGCAGAAGATTCTACTCAACATGTCCCTT
CAGAAACCAGTGAGGACCCTGAAGTTGAGGTGACCATTGAAGATGATGATTATTCTCCACCTAC
CAAGAGGCCAAAGAGCAGTGAGCCGCCCCCACCCCCACCGGTCCCAGAGCCCACCAACGCCGGC
AAGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAACGCGCGCATCACTGACCTACGGAAAC
AAGTGGAAGAATTGTTTGAAAGAAAATACGCTCAAGCTATAAAAGCCAAAGGCCCGGTGACGAT
CCCATACCCTCTTTTCCAGTCGCACGTCGAAGATCTGTATGTAGAGGGCCTTCCTGAAGGGATC
CCCTTTAGAAGGCCATCAACGTACGGCATTCCTCGCCTGGAGAGGATATTGCTGGCAAAGGAGA
GGATCCGCTTTGTGATCAAGAAACATGAGCTTCTGAACTCAACACGAGAAGATTTACAGCTGGA
CAAGCCCGCATCAGGAGTGAAGGAAGAGTGGTATGCTCGTATCACCAAACTGAGGAAGATGGTT
GACCAGCTCTTCTGCAAGAAATTTGCTGAGGCCTTGGGAAGCACAGAAGCCAAGGCTGTACCGT
ACCAAAAATTCGAGGCCTATCCCAATGATCTCTATGTGGAAGGACTTCCAGAAAACATTCCTTT
CCGAAGCCCCTCATGGTATGGAATCCCAAGACTGGAAAAAATCATCCAAGTGGGCAATCGAATT
AAATTTGTTATCAAGAGACCAGAACTGCTGACTCACAGTACAACTGAGGTGACTCAGCCACGGA
CGAATACGCCAGTCAAGGAAGATTGGAACGTCAGGATCACCAAGCTCCGCAAGCAGGTGGAGGA
GATCTTTAACTTGAAGTTTGCTCAAGCTCTTGGCCTCACAGAGGCTGTGAAGGTGCCGTATCCT
GTGTTCGAATCCAACCCAGAATTTCTGTATGTGGAAGGGCTCCCTGAGGGGATCCCCTTCCGAA
GCCCTACCTGGTTTGGGATTCCACGCCTTGAGAGGATTGTCCGTGGGAGCAATAAGATCAAGTT
TGTTGTTAAAAAGCCCGAGCTAGTTGTGTCCTACTTGCCTCCTGGGATGGCTAGCAAAATCAAC
ACTAAAGCATTGCAGTCCCCGAAACGACCACGAAGCCCTGGGAGCAACTCCAAGGTCCCTGAAA
TCGAGGTCACTGTGGAAGGCCCCAACAACAACAGTCCTCAGACCTCTACCGTTCGAACTCCTAC
CCAGACCAACGGTTCAAACGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTTGAGGCCTGG
AACGCTAAGATCACAGACCTGAAGCAGAAAGTGGAGAATCTCTTCAATGAAAAGTGCGGGGAAG
CTCTTGGCCTTAAGCAGGCTGTGAAAGTACCGTTTGCGCTATTTGAGTCCTTCCCAGAGGACTT
CTACGTAGAAGGCTTACCCGAGGGCGTGCCCTTCCGAAGACCATCCACTTTTGGCATTCCAAGG
CTGGAGAAGATCCTCCGGAACAAGGCCAAGATAAAGTTCATCATTAAAAAACCTGAGATGTTCG
AGACGGCCATCAAAGAGAGCACCTCTTCCAAAAGCCCTCCGAGGAAGACGAACTCATCCCCCAG
TGTCAATACGACAGCCTCAGGTGTGGAAGATCTTAACATCATTCAGGTGACAATCCCAGATGAC
GACAACGAACGACTCTCCAAAGTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGTCAACGACCTCT
TCAGCCGAAAGTTTGGTGAAGCTATTGGGATGGGCTTCCCCGTGAAGGTCCCCTACAGGAAAAT
CACCATCAACCCTGGCTGCGTGGTGGTCGATGGCATGCCCCCGGGGGTGTCCTTCAAAGCCCCC
AGCTATCTGGAGATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAAGTTCACTG
TCATTAGACCATTCCCAGGACTGGTGATTAATAACCAGCTGGTTGATCAGAATGAGTCTGAAGG
CCCTGTGATACAAGAATCAGCTGAGGCAAGCCAGTTGGAAGTTCCAGCAACAGAAGAAATCAAA
GAGACAGATGGGAGCTCACAGATCAAGCAGGAGCCAGACCCCACGTGGTAGACCGTGGCTCTCC
AGGTTCGGCTCCCGGCGTGAGTGGTGGAGAAGAGCTTTCGGACCCGCTCCGGCCAGCTCTGTAA
TATACTTGTATAACAGAAATACCTTCTATACAAACCTTCTTTTCTACTTTTAGATAGAAATGTC
TACTTTCTCAGCAGTTCTGTGAATTGAACTACATAGCGTGATGAGATGCGCGTGCCTGGCTGGC
TTGGGAATGCACTAGAAGGATTTTGCAGCAGTGCTGGAAGGAGGCGGGGATGGCAGGGACGACT
CTTAGGGTTTCTCATGCATCGGGCAGAGCCTTGGGCTGAGGGGCGTATCCCCGTCAGTGAGCTA
TTCCTCCAGAGCATCTTGGCTTCCGCAGGGAAGGAAACCCCTGTGCTAGTCAGTGCGTTAGTTT
TTCTATTGAAAACCAGTTCCGTGATCTTGCACTCAGCTCCCCCTCCTGCCCAGGGGAGGGCTGC
TGTCTGTGTATGTGACTAAGCCTCCTCCCGAGTTCCATTATGAGTCCTCTGTCCTCACTGTCAT
TCAAAGCAAAGCCGGCCAGTGAGCAGCCAGTGCGTCCGAGTGCAACTGGAGAGGCTGACCTCGG
AGTCTCTCTCGAGGTTACTTTGCAGCAAGTAAATTTCTGGGCGTATCCAGAAGGTCAGAGGCCA
GTGGTCAGGTGTGCATGCTTGAGCAGCTGGATGACTCAACCCTCCCTAACCACCAGGACCTGCA
GTGACCTGGGGTGCTCTGGGTGGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTGGTTGTCTCTAA
CCACCTGTCTGGCCTCGGTGCCAGGGTGGGGAGTGGGGTACCTTGGTGTCCTCGCCCTCTGTGG
GGCTCCACGTGGGAGCTCGCAGACGATGCCACTGTATAAGGCAGCAGCTCTCAGCAGTTAGAGG
GTGTGAGGGCACCGCTCTCAGTAGCGTCACCACGATGTTCACCATGGGAAATTATATCACACGG
TAGCAGAAATAGGCATTTTATGTGTTCCTTATATTTTACCTCAGATTGTAGATATAGGGTAATA
AATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_017598369 ⟹ XP_017453858

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,057,211 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,420,772 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,430,459 - 25,487,970 (+)	NCBI

Sequence:

show sequence

AAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAG
GATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAG
GCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTGTTTGTCGTTGGAACCGAAAGAGGGC
GTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATTTTGTGAAGTATTGTGTTGAAGAAGA
AGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAACCCAGGCCAACCGGATGAGCGTGGAT
GCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGACTATTTCTGCTTTTGTTATGGGAAAG
CCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGAAGATGCTGCGTGACCAGTCAGCTGT
GGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCATCCCGAGCACTATGACCTCGCAACC
TTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTCATCATCAAGAGACCTTTCCTCGAGC
CGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATGCTGACAGGCCCATGCTGTCTCCGGG
TGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCACGGAAGATTCTGATTCTACTCAACAT
GTCCCTTCAGAAACCAGTGAGGACCCTGAAGTTGAGGTGACCATTGAAGATGATGATTATTCTC
CACCTACCAAGAGGCCAAAGAGCAGTGAGCCGCCCCCACCCCCACCGGTCCCAGAGCCCACCAA
CGCCGGCAAGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAACGCGCGCATCACTGACCTA
CGGAAACAAGTGGAAGAATTGTTTGAAAGAAAATACGCTCAAGCTATAAAAGCCAAAGGCCCGG
TGACGATCCCATACCCTCTTTTCCAGTCGCACGTCGAAGATCTGTATGTAGAGGGCCTTCCTGA
AGGGATCCCCTTTAGAAGGCCATCAACGTACGGCATTCCTCGCCTGGAGAGGATATTGCTGGCA
AAGGAGAGGATCCGCTTTGTGATCAAGAAACATGAGCTTCTGAACTCAACACGAGAAGATTTAC
AGCTGGACAAGCCCGCATCAGGAGTGAAGGAAGAGTGGTATGCTCGTATCACCAAACTGAGGAA
GATGGTTGACCAGCTCTTCTGCAAGAAATTTGCTGAGGCCTTGGGAAGCACAGAAGCCAAGGCT
GTACCGTACCAAAAATTCGAGGCCTATCCCAATGATCTCTATGTGGAAGGACTTCCAGAAAACA
TTCCTTTCCGAAGCCCCTCATGGTATGGAATCCCAAGACTGGAAAAAATCATCCAAGTGGGCAA
TCGAATTAAATTTGTTATCAAGAGACCAGAACTGCTGACTCACAGTACAACTGAGGTGACTCAG
CCACGGACGAATACGCCAGTCAAGGAAGATTGGAACGTCAGGATCACCAAGCTCCGCAAGCAGG
TGGAGGAGATCTTTAACTTGAAGTTTGCTCAAGCTCTTGGCCTCACAGAGGCTGTGAAGGTGCC
GTATCCTGTGTTCGAATCCAACCCAGAATTTCTGTATGTGGAAGGGCTCCCTGAGGGGATCCCC
TTCCGAAGCCCTACCTGGTTTGGGATTCCACGCCTTGAGAGGATTGTCCGTGGGAGCAATAAGA
TCAAGTTTGTTGTTAAAAAGCCCGAGCTAGTTGTGTCCTACTTGCCTCCTGGGATGGCTAGCAA
AATCAACACTAAAGCATTGCAGTCCCCGAAACGACCACGAAGCCCTGGGAGCAACTCCAAGGTC
CCTGAAATCGAGGTCACTGTGGAAGGCCCCAACAACAACAGTCCTCAGACCTCTACCGTTCGAA
CTCCTACCCAGACCAACGGTTCAAACGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTTGA
GGCCTGGAACGCTAAGATCACAGACCTGAAGCAGAAAGTGGAGAATCTCTTCAATGAAAAGTGC
GGGGAAGCTCTTGGCCTTAAGCAGGCTGTGAAAGTACCGTTTGCGCTATTTGAGTCCTTCCCAG
AGGACTTCTACGTAGAAGGCTTACCCGAGGGCGTGCCCTTCCGAAGACCATCCACTTTTGGCAT
TCCAAGGCTGGAGAAGATCCTCCGGAACAAGGCCAAGATAAAGTTCATCATTAAAAAACCTGAG
ATGTTCGAGACGGCCATCAAAGAGAGCACCTCTTCCAAAAGCCCTCCGAGGAAGACGAACTCAT
CCCCCAGTGTCAATACGACAGCCTCAGGTGTGGAAGATCTTAACATCATTCAGGTGACAATCCC
AGATGACGACAACGAACGACTCTCCAAAGTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGTCAAC
GACCTCTTCAGCCGAAAGTTTGGTGAAGCTATTGGGATGGGCTTCCCCGTGAAGGTCCCCTACA
GGAAAATCACCATCAACCCTGGCTGCGTGGTGGTCGATGGCATGCCCCCGGGGGTGTCCTTCAA
AGCCCCCAGCTATCTGGAGATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAAG
TTCACTGTCATTAGACCATTCCCAGGACTGGTGATTAATAACCAGCTGGTTGATCAGAATGAGT
CTGAAGGCCCTGTGATACAAGAATCAGCTGAGGCAAGCCAGTTGGAAGTTCCAGCAACAGAAGA
AATCAAAGAGACAGATGGGAGCTCACAGATCAAGCAGGAGCCAGACCCCACGTGGTAGACCGTG
GCTCTCCAGGTTCGGCTCCCGGCGTGAGTGGTGGAGAAGAGCTTTCGGACCCGCTCCGGCCAGC
TCTGTAATATACTTGTATAACAGAAATACCTTCTATACAAACCTTCTTTTCTACTTTTAGATAG
AAATGTCTACTTTCTCAGCAGTTCTGTGAATTGAACTACATAGCGTGATGAGATGCGCGTGCCT
GGCTGGCTTGGGAATGCACTAGAAGGATTTTGCAGCAGTGCTGGAAGGAGGCGGGGATGGCAGG
GACGACTCTTAGGGTTTCTCATGCATCGGGCAGAGCCTTGGGCTGAGGGGCGTATCCCCGTCAG
TGAGCTATTCCTCCAGAGCATCTTGGCTTCCGCAGGGAAGGAAACCCCTGTGCTAGTCAGTGCG
TTAGTTTTTCTATTGAAAACCAGTTCCGTGATCTTGCACTCAGCTCCCCCTCCTGCCCAGGGGA
GGGCTGCTGTCTGTGTATGTGACTAAGCCTCCTCCCGAGTTCCATTATGAGTCCTCTGTCCTCA
CTGTCATTCAAAGCAAAGCCGGCCAGTGAGCAGCCAGTGCGTCCGAGTGCAACTGGAGAGGCTG
ACCTCGGAGTCTCTCTCGAGGTTACTTTGCAGCAAGTAAATTTCTGGGCGTATCCAGAAGGTCA
GAGGCCAGTGGTCAGGTGTGCATGCTTGAGCAGCTGGATGACTCAACCCTCCCTAACCACCAGG
ACCTGCAGTGACCTGGGGTGCTCTGGGTGGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTGGTTG
TCTCTAACCACCTGTCTGGCCTCGGTGCCAGGGTGGGGAGTGGGGTACCTTGGTGTCCTCGCCC
TCTGTGGGGCTCCACGTGGGAGCTCGCAGACGATGCCACTGTATAAGGCAGCAGCTCTCAGCAG
TTAGAGGGTGTGAGGGCACCGCTCTCAGTAGCGTCACCACGATGTTCACCATGGGAAATTATAT
CACACGGTAGCAGAAATAGGCATTTTATGTGTTCCTTATATTTTACCTCAGATTGTAGATATAG
GGTAATAAATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_017598370 ⟹ XP_017453859

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,057,211 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,420,772 - 22,476,243 (+)	NCBI
Rnor_6.0	12	25,430,459 - 25,487,970 (+)	NCBI

Sequence:

show sequence

AAATCATGGCCCAAGTAGCGATGTCCGCGCTGCCTGCGGAGGATGAGGAGTCTTCGGAGAGCAG
GATGGTGGTGACGTTCCTCATGTCTGCCCTGGAGTCCATGTGTAAAGAGCTGGCCAAGTCCAAG
GCTGAGGTGGCCTGCATCGCCGTGTATGAGACAGATGTGTTTGTCGTTGGAACCGAAAGAGGGC
GTGCTTTTGTCAATACCAGAAAAGATTTCCAAAAAGATTTTGTGAAGTATTGTGTTGAAGAAGA
AGAAAAGGCCGCCGAGATGCATAAGATGAAATGTACAACCCAGGCCAACCGGATGAGCGTGGAT
GCTGTAGAAATTGAGACCCTCAGAAAAACGGTGGAGGACTATTTCTGCTTTTGTTATGGGAAAG
CCTTAGGCAAATCCACAGTGGTCCCTGTGCCATATGAGAAGATGCTGCGTGACCAGTCAGCTGT
GGCGGTGCAGGGGCTTCCCGAGGGGGTCGCCTTCAAGCATCCCGAGCACTATGACCTCGCAACC
TTGAAGTGGATTCTGGAGAACAAGGCGGGGATTTCCTTCATCATCAAGAGACCTTTCCTCGAGC
CGAAGAAACACCTTGGTGGTCGAGTGATGGCGGCCGATGCTGACAGGCCCATGCTGTCTCCGGG
TGGAAGTTGTGGCCCCATCAAAGTGAAAACTGAGCCCACGGAAGATTCTGGAAGCCATCACTCC
TCAGAAGGCAACGAGGGAGCGGAAGTGGAAGTGCCAGCAGAAGATGATGATTATTCTCCACCTA
CCAAGAGGCCAAAGAGCAGTGAGCCGCCCCCACCCCCACCGGTCCCAGAGCCCACCAACGCCGG
CAAGCGCAAAGTGAGGGAGTTCAACTTTGAGAAATGGAACGCGCGCATCACTGACCTACGGAAA
CAAGTGGAAGAATTGTTTGAAAGAAAATACGCTCAAGCTATAAAAGCCAAAGGCCCGGTGACGA
TCCCATACCCTCTTTTCCAGTCGCACGTCGAAGATCTGTATGTAGAGGGCCTTCCTGAAGGGAT
CCCCTTTAGAAGGCCATCAACGTACGGCATTCCTCGCCTGGAGAGGATATTGCTGGCAAAGGAG
AGGATCCGCTTTGTGATCAAGAAACATGAGCTTCTGAACTCAACACGAGAAGATTTACAGCTGG
ACAAGCCCGCATCAGGAGTGAAGGAAGAGTGGTATGCTCGTATCACCAAACTGAGGAAGATGGT
TGACCAGCTCTTCTGCAAGAAATTTGCTGAGGCCTTGGGAAGCACAGAAGCCAAGGCTGTACCG
TACCAAAAATTCGAGGCCTATCCCAATGATCTCTATGTGGAAGGACTTCCAGAAAACATTCCTT
TCCGAAGCCCCTCATGGTATGGAATCCCAAGACTGGAAAAAATCATCCAAGTGGGCAATCGAAT
TAAATTTGTTATCAAGAGACCAGAACTGCTGACTCACAGTACAACTGAGGTGACTCAGCCACGG
ACGAATACGCCAGTCAAGGAAGATTGGAACGTCAGGATCACCAAGCTCCGCAAGCAGGTGGAGG
AGATCTTTAACTTGAAGTTTGCTCAAGCTCTTGGCCTCACAGAGGCTGTGAAGGTGCCGTATCC
TGTGTTCGAATCCAACCCAGAATTTCTGTATGTGGAAGGGCTCCCTGAGGGGATCCCCTTCCGA
AGCCCTACCTGGTTTGGGATTCCACGCCTTGAGAGGATTGTCCGTGGGAGCAATAAGATCAAGT
TTGTTGTTAAAAAGCCCGAGCTAGTTGTGTCCTACTTGCCTCCTGGGATGGCTAGCAAAATCAA
CACTAAAGCATTGCAGTCCCCGAAACGACCACGAAGCCCTGGGAGCAACTCCAAGGTCCCTGAA
ATCGAGGTCACTGTGGAAGGCCCCAACAACAACAGTCCTCAGACCTCTACCGTTCGAACTCCTA
CCCAGACCAACGGTTCAAACGTTCCCTTCAAGCCTCGAGGGAGAGAGTTTTCCTTTGAGGCCTG
GAACGCTAAGATCACAGACCTGAAGCAGAAAGTGGAGAATCTCTTCAATGAAAAGTGCGGGGAA
GCTCTTGGCCTTAAGCAGGCTGTGAAAGTACCGTTTGCGCTATTTGAGTCCTTCCCAGAGGACT
TCTACGTAGAAGGCTTACCCGAGGGCGTGCCCTTCCGAAGACCATCCACTTTTGGCATTCCAAG
GCTGGAGAAGATCCTCCGGAACAAGGCCAAGATAAAGTTCATCATTAAAAAACCTGAGATGTTC
GAGACGGCCATCAAAGAGAGCACCTCTTCCAAAAGCCCTCCGAGGAAGACGAACTCATCCCCCA
GTGTCAATACGACAGCCTCAGGTGTGGAAGATCTTAACATCATTCAGGTGACAATCCCAGATGA
CGACAACGAACGACTCTCCAAAGTCGAGAAGGCCAGGCAGCTTCGGGAGCAAGTCAACGACCTC
TTCAGCCGAAAGTTTGGTGAAGCTATTGGGATGGGCTTCCCCGTGAAGGTCCCCTACAGGAAAA
TCACCATCAACCCTGGCTGCGTGGTGGTCGATGGCATGCCCCCGGGGGTGTCCTTCAAAGCCCC
CAGCTATCTGGAGATCAGCTCCATGAGAAGGATCTTAGATTCTGCTGAGTTTATCAAGTTCACT
GTCATTAGACCATTCCCAGGACTGGTGATTAATAACCAGCTGGTTGATCAGAATGAGTCTGAAG
GCCCTGTGATACAAGAATCAGCTGAGGCAAGCCAGTTGGAAGTTCCAGCAACAGAAGAAATCAA
AGAGACAGATGGGAGCTCACAGATCAAGCAGGAGCCAGACCCCACGTGGTAGACCGTGGCTCTC
CAGGTTCGGCTCCCGGCGTGAGTGGTGGAGAAGAGCTTTCGGACCCGCTCCGGCCAGCTCTGTA
ATATACTTGTATAACAGAAATACCTTCTATACAAACCTTCTTTTCTACTTTTAGATAGAAATGT
CTACTTTCTCAGCAGTTCTGTGAATTGAACTACATAGCGTGATGAGATGCGCGTGCCTGGCTGG
CTTGGGAATGCACTAGAAGGATTTTGCAGCAGTGCTGGAAGGAGGCGGGGATGGCAGGGACGAC
TCTTAGGGTTTCTCATGCATCGGGCAGAGCCTTGGGCTGAGGGGCGTATCCCCGTCAGTGAGCT
ATTCCTCCAGAGCATCTTGGCTTCCGCAGGGAAGGAAACCCCTGTGCTAGTCAGTGCGTTAGTT
TTTCTATTGAAAACCAGTTCCGTGATCTTGCACTCAGCTCCCCCTCCTGCCCAGGGGAGGGCTG
CTGTCTGTGTATGTGACTAAGCCTCCTCCCGAGTTCCATTATGAGTCCTCTGTCCTCACTGTCA
TTCAAAGCAAAGCCGGCCAGTGAGCAGCCAGTGCGTCCGAGTGCAACTGGAGAGGCTGACCTCG
GAGTCTCTCTCGAGGTTACTTTGCAGCAAGTAAATTTCTGGGCGTATCCAGAAGGTCAGAGGCC
AGTGGTCAGGTGTGCATGCTTGAGCAGCTGGATGACTCAACCCTCCCTAACCACCAGGACCTGC
AGTGACCTGGGGTGCTCTGGGTGGAGTCAGGCTGGCCTTGTGTCTGCCTGGTTGGTTGTCTCTA
ACCACCTGTCTGGCCTCGGTGCCAGGGTGGGGAGTGGGGTACCTTGGTGTCCTCGCCCTCTGTG
GGGCTCCACGTGGGAGCTCGCAGACGATGCCACTGTATAAGGCAGCAGCTCTCAGCAGTTAGAG
GGTGTGAGGGCACCGCTCTCAGTAGCGTCACCACGATGTTCACCATGGGAAATTATATCACACG
GTAGCAGAAATAGGCATTTTATGTGTTCCTTATATTTTACCTCAGATTGTAGATATAGGGTAAT
AAATAAAATCCATCCATGCCTTTCA

hide sequence

RefSeq Acc Id:

XM_039089536 ⟹ XP_038945464

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,076,229 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,439,794 - 22,476,243 (+)	NCBI

RefSeq Acc Id:

XM_039089537 ⟹ XP_038945465

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,076,229 - 28,112,669 (+)	NCBI
mRatBN7.2	12	22,439,794 - 22,476,243 (+)	NCBI

RefSeq Acc Id:

XM_063271408 ⟹ XP_063127478

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271409 ⟹ XP_063127479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271410 ⟹ XP_063127480

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,038,970 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271411 ⟹ XP_063127481

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271413 ⟹ XP_063127483

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,038,282 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271414 ⟹ XP_063127484

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,039,004 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271415 ⟹ XP_063127485

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,038,282 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271416 ⟹ XP_063127486

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,038,270 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271417 ⟹ XP_063127487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,344 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271418 ⟹ XP_063127488

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,404 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271419 ⟹ XP_063127489

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,404 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271420 ⟹ XP_063127490

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,038,265 - 28,112,669 (+)	NCBI

RefSeq Acc Id:

XM_063271421 ⟹ XP_063127491

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	28,037,353 - 28,112,669 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001001512	(Get FASTA)	NCBI Sequence Viewer
	NP_001388138	(Get FASTA)	NCBI Sequence Viewer
	NP_001388139	(Get FASTA)	NCBI Sequence Viewer
	XP_006249232	(Get FASTA)	NCBI Sequence Viewer
	XP_008767363	(Get FASTA)	NCBI Sequence Viewer
	XP_017453849	(Get FASTA)	NCBI Sequence Viewer
	XP_017453851	(Get FASTA)	NCBI Sequence Viewer
	XP_017453852	(Get FASTA)	NCBI Sequence Viewer
	XP_017453855	(Get FASTA)	NCBI Sequence Viewer
	XP_017453858	(Get FASTA)	NCBI Sequence Viewer
	XP_017453859	(Get FASTA)	NCBI Sequence Viewer
	XP_038945464	(Get FASTA)	NCBI Sequence Viewer
	XP_038945465	(Get FASTA)	NCBI Sequence Viewer
	XP_063127478	(Get FASTA)	NCBI Sequence Viewer
	XP_063127479	(Get FASTA)	NCBI Sequence Viewer
	XP_063127480	(Get FASTA)	NCBI Sequence Viewer
	XP_063127481	(Get FASTA)	NCBI Sequence Viewer
	XP_063127483	(Get FASTA)	NCBI Sequence Viewer
	XP_063127484	(Get FASTA)	NCBI Sequence Viewer
	XP_063127485	(Get FASTA)	NCBI Sequence Viewer
	XP_063127486	(Get FASTA)	NCBI Sequence Viewer
	XP_063127487	(Get FASTA)	NCBI Sequence Viewer
	XP_063127488	(Get FASTA)	NCBI Sequence Viewer
	XP_063127489	(Get FASTA)	NCBI Sequence Viewer
	XP_063127490	(Get FASTA)	NCBI Sequence Viewer
	XP_063127491	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH85815	(Get FASTA)	NCBI Sequence Viewer
	AAO32678	(Get FASTA)	NCBI Sequence Viewer
	AAO32679	(Get FASTA)	NCBI Sequence Viewer
	EDM13438	(Get FASTA)	NCBI Sequence Viewer
	EDM13439	(Get FASTA)	NCBI Sequence Viewer
	EDM13440	(Get FASTA)	NCBI Sequence Viewer
	EDM13441	(Get FASTA)	NCBI Sequence Viewer
	EDM13442	(Get FASTA)	NCBI Sequence Viewer
	EDM13443	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000002020.3
	ENSRNOP00000040835
	ENSRNOP00000040835.2
	ENSRNOP00000073166
	ENSRNOP00000075956
	ENSRNOP00000076791
	ENSRNOP00000077117
	ENSRNOP00000080788
	ENSRNOP00000095456
GenBank Protein	Q5U2Y1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001001512 ⟸ NM_001001512
- Peptide Label:	isoform 1
- UniProtKB:	A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSDDDYSPPTKRPKSSEPPPPPPVPEPTNA GKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEG IPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKM VDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNR IKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPY PVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGMASKI NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRTPTQTNGSNVPFKPRGREFSFEA WNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIP RLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSSPSVNTTASGVEDLNIIQVTIPD DDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKA PSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESEGPVIQESAEASQLEVPATEEI KETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_006249232 ⟸ XM_006249170
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4T7 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQAG PSETDDVDEKLPLSKALQGSHHSSEGNEGAEVEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP PTKRPKSSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPV TIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQ LDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENI PFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQV EEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKI KFVVKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRT PTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPE DFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSS PSVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYR KITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNES EGPVIQESAEASQLEVPATEEIKETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_008767363 ⟸ XM_008769141
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4T7 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQAG PSETDDVDEKLPLSKALQGSHHSSEGNEGAEVEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP PTKRPKSSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPV TIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQ LDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENI PFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQV EEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKI KFVVKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRT PTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPE DFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSS PSVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYR KITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNES EGPVIQESAEASQLEVPATEEIKETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_017453851 ⟸ XM_017598362
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AST1 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQAG PSETDDVDEKLPLSKALQGSHHSSEGNEGAEVEVPAEDDDYSPPTKRPKSSEPPPPPPVPEPTN AGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPE GIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRK MVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGN RIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVP YPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGMASK INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRTPTQTNGSNVPFKPRGREFSFE AWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGI PRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSSPSVNTTASGVEDLNIIQVTIP DDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFK APSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESEGPVIQESAEASQLEVPATEE IKETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_017453849 ⟸ XM_017598360
- Peptide Label:	isoform X2
- UniProtKB:	A6J0J9 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQGP SETDDVDEKLPLSKALQGSHHSSEGNEGAEVEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSPP TKRPKSSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVT IPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQL DKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENIP FRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVE EIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIK FVVKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRTP TQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPED FYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSSP SVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRK ITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESE GPVIQESAEASQLEVPATEEIKETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_017453852 ⟸ XM_017598363
- Peptide Label:	isoform X5
- UniProtKB:	A6J0K0 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQGP SETDDVDEKLPLSKALQGSHHSSEGNEGAEVEVPAEDDDYSPPTKRPKSSEPPPPPPVPEPTNA GKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEG IPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKM VDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNR IKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPY PVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGMASKI NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRTPTQTNGSNVPFKPRGREFSFEA WNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIP RLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSSPSVNTTASGVEDLNIIQVTIPD DDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKA PSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESEGPVIQESAEASQLEVPATEEI KETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_017453855 ⟸ XM_017598366
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZK83 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGSHHSSEGNEGAEVEVPAEDSTQHVPSE TSEDPEVEVTIEDDDYSPPTKRPKSSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQV EELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERI RFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQ KFEAYPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTN TPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSP TWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIE VTVEGPNNNSPQTSTVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEAL GLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFET AIKESTSSKSPPRKTNSSPSVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFS RKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVI RPFPGLVINNQLVDQNESEGPVIQESAEASQLEVPATEEIKETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_017453859 ⟸ XM_017598370
- Peptide Label:	isoform X11
- UniProtKB:	A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSGSHHSSEGNEGAEVEVPAEDDDYSPPTK RPKSSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTIP YPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDK PASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENIPFR SPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEI FNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV VKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRTPTQ TNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFY VEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSSPSV NTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKIT INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESEGP VIQESAEASQLEVPATEEIKETDGSSQIKQEPDPTW hide sequence

RefSeq Acc Id:	XP_017453858 ⟸ XM_017598369
- Peptide Label:	isoform X10
- UniProtKB:	A0A1B0GWN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQVAMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRA FVNTRKDFQKDFVKYCVEEEEKAAEMHKMKCTTQANRMSVDAVEIETLRKTVEDYFCFCYGKAL GKSTVVPVPYEKMLRDQSAVAVQGLPEGVAFKHPEHYDLATLKWILENKAGISFIIKRPFLEPK KHLGGRVMAADADRPMLSPGGSCGPIKVKTEPTEDSDSTQHVPSETSEDPEVEVTIEDDDYSPP TKRPKSSEPPPPPPVPEPTNAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVT IPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQL DKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAYPNDLYVEGLPENIP FRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVE EIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIK FVVKKPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNSPQTSTVRTP TQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPED FYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKTNSSP SVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRK ITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNESE GPVIQESAEASQLEVPATEEIKETDGSSQIKQEPDPTW hide sequence

Ensembl Acc Id:

ENSRNOP00000073166 ⟸ ENSRNOT00000077189

Ensembl Acc Id:

ENSRNOP00000002020 ⟸ ENSRNOT00000002020

Ensembl Acc Id:

ENSRNOP00000075956 ⟸ ENSRNOT00000092982

Ensembl Acc Id:

ENSRNOP00000075949 ⟸ ENSRNOT00000092956

Ensembl Acc Id:

ENSRNOP00000040835 ⟸ ENSRNOT00000040356

RefSeq Acc Id:	XP_038945464 ⟸ XM_039089536
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_038945465 ⟸ XM_039089537
- Peptide Label:	isoform X13

Ensembl Acc Id:

ENSRNOP00000093772 ⟸ ENSRNOT00000099547

Ensembl Acc Id:

ENSRNOP00000077117 ⟸ ENSRNOT00000107220

Ensembl Acc Id:

ENSRNOP00000095456 ⟸ ENSRNOT00000109966

Ensembl Acc Id:

ENSRNOP00000096595 ⟸ ENSRNOT00000098927

Ensembl Acc Id:

ENSRNOP00000080788 ⟸ ENSRNOT00000104703

Ensembl Acc Id:

ENSRNOP00000076791 ⟸ ENSRNOT00000099403

RefSeq Acc Id:	NP_001388138 ⟸ NM_001401209
- Peptide Label:	isoform 2
- UniProtKB:	Q5U2Y1 (UniProtKB/Swiss-Prot), Q80SX4 (UniProtKB/Swiss-Prot), A6J0K2 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001388139 ⟸ NM_001401210
- Peptide Label:	isoform 3
- UniProtKB:	A0A8I6ALH4 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127487 ⟸ XM_063271417
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6ALH4 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127491 ⟸ XM_063271421
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZRM5 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127488 ⟸ XM_063271418
- Peptide Label:	isoform X7
- UniProtKB:	A6J0K4 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127489 ⟸ XM_063271419
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZRM5 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127490 ⟸ XM_063271420
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZRM5 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127486 ⟸ XM_063271416
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6ALH4 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127483 ⟸ XM_063271413
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4T7 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127485 ⟸ XM_063271415
- Peptide Label:	isoform X3
- UniProtKB:	Q80SX4 (UniProtKB/Swiss-Prot), Q5U2Y1 (UniProtKB/Swiss-Prot), A6J0K2 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127480 ⟸ XM_063271410
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6ALH4 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127478 ⟸ XM_063271408
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K4T7 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127479 ⟸ XM_063271409
- Peptide Label:	isoform X3
- UniProtKB:	Q80SX4 (UniProtKB/Swiss-Prot), Q5U2Y1 (UniProtKB/Swiss-Prot), A6J0K2 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127481 ⟸ XM_063271411
- Peptide Label:	isoform X7
- UniProtKB:	A6J0K4 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127484 ⟸ XM_063271414
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZRM5 (UniProtKB/TrEMBL), A0A1B0GWN0 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5U2Y1-F1-model_v2	AlphaFold	Q5U2Y1	1-979	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698572

Promoter ID:

EPDNEW_R9097

Type:

initiation region

Name:

Gtf2i_1

Description:

general transcription factor II I

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	12	25,411,337 - 25,411,397	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727961	AgrOrtholog
BioCyc Gene	G2FUF-19572	BioCyc
Ensembl Genes	ENSRNOG00000001479	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000002020.7	UniProtKB/Swiss-Prot
	ENSRNOT00000040356	ENTREZGENE
	ENSRNOT00000040356.6	UniProtKB/Swiss-Prot
	ENSRNOT00000077189	ENTREZGENE
	ENSRNOT00000092982	ENTREZGENE
	ENSRNOT00000099403	ENTREZGENE
	ENSRNOT00000104703	ENTREZGENE
	ENSRNOT00000107220	ENTREZGENE
	ENSRNOT00000109966	ENTREZGENE
Gene3D-CATH	3.90.1460.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7123295	IMAGE-MGC_LOAD
InterPro	GTF2I	UniProtKB/Swiss-Prot
	GTF2I-like_rpt_sf	UniProtKB/Swiss-Prot
	TF_II-I	UniProtKB/Swiss-Prot
KEGG Report	rno:353256	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94055	IMAGE-MGC_LOAD
NCBI Gene	353256	ENTREZGENE
PANTHER	GENERAL TRANSCRIPTION FACTOR II-I	UniProtKB/Swiss-Prot
	GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1	UniProtKB/Swiss-Prot
Pfam	GTF2I	UniProtKB/Swiss-Prot
PhenoGen	Gtf2i	PhenoGen
PIRSF	TF_II-I	UniProtKB/Swiss-Prot
PROSITE	GTF2I	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000001479	RatGTEx
Superfamily-SCOP	SSF117773	UniProtKB/Swiss-Prot
UniProt	A0A0G2K4T7	ENTREZGENE, UniProtKB/TrEMBL
	A0A1B0GWN0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZK57_RAT	UniProtKB/TrEMBL
	A0A8I5ZK83	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZRM5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ALH4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AST1	ENTREZGENE, UniProtKB/TrEMBL
	A6J0J9	ENTREZGENE, UniProtKB/TrEMBL
	A6J0K0	ENTREZGENE, UniProtKB/TrEMBL
	A6J0K2	ENTREZGENE, UniProtKB/TrEMBL
	A6J0K4	ENTREZGENE, UniProtKB/TrEMBL
	GTF2I_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q80SX4	ENTREZGENE
UniProt Secondary	Q80SX4	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-07-08	Gtf2i	general transcription factor II I			Symbol and Name status set to approved	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

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Imported Disease Annotations - CTD

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