Sgpp1 (sphingosine-1-phosphate phosphatase 1) - Rat Genome Database

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Gene: Sgpp1 (sphingosine-1-phosphate phosphatase 1) Rattus norvegicus
Analyze
Symbol: Sgpp1
Name: sphingosine-1-phosphate phosphatase 1
RGD ID: 727829
Description: Predicted to enable sphingosine-1-phosphate phosphatase activity. Predicted to be involved in several processes, including ER to Golgi ceramide transport; phospholipid dephosphorylation; and sphingosine metabolic process. Predicted to act upstream of or within extrinsic apoptotic signaling pathway; intrinsic apoptotic signaling pathway; and sphinganine-1-phosphate metabolic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human SGPP1 (sphingosine-1-phosphate phosphatase 1); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; sphingolipid metabolic pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC81536; sphingosine-1-phosphatase 1; sphingosine-1-phosphate phosphohydrolase; Spp1; SPPase1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86100,161,024 - 100,182,214 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl6100,161,024 - 100,182,259 (-)EnsemblGRCr8
mRatBN7.2694,425,339 - 94,446,534 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl694,425,339 - 94,446,534 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx694,818,696 - 94,839,851 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0695,117,168 - 95,138,323 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0694,546,078 - 94,567,225 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0698,675,324 - 98,696,492 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl698,675,326 - 98,695,988 (-)Ensemblrn6Rnor6.0
Rnor_5.06108,093,013 - 108,114,339 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4698,306,168 - 98,327,175 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera692,851,441 - 92,872,597 (-)NCBICelera
RGSC_v3.1698,311,877 - 98,330,264 (-)NCBI
Cytogenetic Map6q24NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2-butoxyethanol  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
benzo[a]pyrene  (ISO)
bilirubin IXalpha  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
buspirone  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
cisplatin  (ISO)
clofibric acid  (EXP)
daidzein  (ISO)
deoxynivalenol  (ISO)
diazinon  (EXP)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dieldrin  (EXP)
dimethyl sulfoxide  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
fenthion  (ISO)
flutamide  (EXP,ISO)
folic acid  (ISO)
FR900359  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
glycitein  (ISO)
lamivudine  (ISO)
methapyrilene  (EXP)
methidathion  (ISO)
methylmercury chloride  (ISO)
monosodium L-glutamate  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nickel dichloride  (EXP)
nicotine  (ISO)
nimesulide  (EXP)
okadaic acid  (ISO)
p-toluidine  (EXP)
panobinostat  (ISO)
paracetamol  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
Phenelzine  (ISO)
phenobarbital  (ISO)
picoxystrobin  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Role of sphingosine-1-phosphate phosphatase 1 in epidermal growth factor-induced chemotaxis. Le Stunff H, etal., J Biol Chem 2004 Aug 13;279(33):34290-7. Epub 2004 Jun 04.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. GOA pipeline RGD automated data pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10563330   PMID:10859351   PMID:11756451   PMID:12235122   PMID:15057822   PMID:15271294   PMID:16782891   PMID:23637227  


Genomics

Comparative Map Data
Sgpp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86100,161,024 - 100,182,214 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl6100,161,024 - 100,182,259 (-)EnsemblGRCr8
mRatBN7.2694,425,339 - 94,446,534 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl694,425,339 - 94,446,534 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx694,818,696 - 94,839,851 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0695,117,168 - 95,138,323 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0694,546,078 - 94,567,225 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0698,675,324 - 98,696,492 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl698,675,326 - 98,695,988 (-)Ensemblrn6Rnor6.0
Rnor_5.06108,093,013 - 108,114,339 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4698,306,168 - 98,327,175 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera692,851,441 - 92,872,597 (-)NCBICelera
RGSC_v3.1698,311,877 - 98,330,264 (-)NCBI
Cytogenetic Map6q24NCBI
SGPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381463,684,216 - 63,728,065 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1463,684,216 - 63,728,065 (-)Ensemblhg38GRCh38
GRCh371464,150,934 - 64,194,783 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361463,220,687 - 63,264,509 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341463,220,688 - 63,264,509NCBI
Celera1444,201,594 - 44,245,417 (-)NCBICelera
Cytogenetic Map14q23.2NCBI
HuRef1444,317,325 - 44,361,142 (-)NCBIHuRef
CHM1_11464,089,953 - 64,133,737 (-)NCBICHM1_1
T2T-CHM13v2.01457,891,616 - 57,935,465 (-)NCBIT2T-CHM13v2.0
Sgpp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391275,761,022 - 75,782,503 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1275,761,023 - 75,782,503 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381275,714,248 - 75,735,729 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1275,714,249 - 75,735,729 (-)Ensemblmm10GRCm38
MGSCv371276,815,235 - 76,836,716 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361276,633,105 - 76,654,502 (-)NCBIMGSCv36mm8
Celera1276,819,194 - 76,840,277 (-)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1232.95NCBI
Sgpp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554666,075,507 - 6,103,739 (+)NCBIChiLan1.0ChiLan1.0
SGPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21564,795,453 - 64,839,332 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11464,011,967 - 64,055,847 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01444,265,017 - 44,308,897 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11462,521,010 - 62,566,309 (-)NCBIPanPan1.1PanPan1.1panPan2
SGPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1838,195,649 - 38,228,299 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl838,197,532 - 38,228,406 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha837,888,039 - 37,921,345 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0838,422,209 - 38,455,539 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl838,422,214 - 38,455,507 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1838,038,844 - 38,072,143 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0838,111,070 - 38,144,393 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0838,471,314 - 38,504,624 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Sgpp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864066,663,173 - 66,690,708 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364957,502,859 - 7,528,515 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364957,500,991 - 7,528,520 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SGPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1194,352,001 - 194,380,907 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11194,351,971 - 194,380,910 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21216,298,626 - 216,383,691 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SGPP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12440,885,464 - 40,926,992 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2440,885,276 - 40,926,937 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605329,080,236 - 29,121,462 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sgpp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473437,297,806 - 37,335,553 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473437,297,954 - 37,337,830 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Sgpp1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1789,870,140 - 89,889,969 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Sgpp1
298 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:68
Count of miRNA genes:62
Interacting mature miRNAs:66
Transcripts:ENSRNOT00000006913
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)664367996109367996Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)688019181136741135Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)690871046135871046Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)693560258136550638Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)698944780143944780Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)693778632138778632Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)684490437129490437Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)690871046135871046Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)693560258136550638Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)693560258136550638Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)686494122112380234Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)699437079125323237Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)699708426112483760Rat

Markers in Region
D6Rat164  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr86100,185,279 - 100,185,627 (+)Marker Load Pipeline
mRatBN7.2694,449,600 - 94,449,948 (+)MAPPERmRatBN7.2
Rnor_6.0698,699,575 - 98,699,922NCBIRnor6.0
Rnor_5.06108,117,430 - 108,117,777UniSTSRnor5.0
RGSC_v3.4698,330,394 - 98,330,743RGDRGSC3.4
RGSC_v3.4698,330,395 - 98,330,742UniSTSRGSC3.4
Celera692,875,677 - 92,876,024UniSTS
RH 3.4 Map6668.4UniSTS
RH 3.4 Map6668.4RGD
SHRSP x BN Map656.7098UniSTS
SHRSP x BN Map656.7098RGD
Cytogenetic Map6q24UniSTS
AI229520  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2694,437,126 - 94,437,344 (+)MAPPERmRatBN7.2
Rnor_6.0698,687,115 - 98,687,332NCBIRnor6.0
Rnor_5.06108,104,970 - 108,105,187UniSTSRnor5.0
RGSC_v3.4698,317,932 - 98,318,149UniSTSRGSC3.4
Celera692,863,238 - 92,863,455UniSTS
RH 3.4 Map6669.1UniSTS
Cytogenetic Map6q24UniSTS
RH136984  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2694,425,377 - 94,425,576 (+)MAPPERmRatBN7.2
Rnor_6.0698,675,363 - 98,675,561NCBIRnor6.0
Rnor_5.06108,093,052 - 108,093,250UniSTSRnor5.0
RGSC_v3.4698,306,207 - 98,306,405UniSTSRGSC3.4
Celera692,851,480 - 92,851,678UniSTS
RH 3.4 Map6667.29UniSTS
Cytogenetic Map6q24UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000006913   ⟹   ENSRNOP00000006913
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6100,161,024 - 100,182,214 (-)Ensembl
mRatBN7.2 Ensembl694,425,339 - 94,446,534 (-)Ensembl
Rnor_6.0 Ensembl698,675,326 - 98,695,988 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000171432   ⟹   ENSRNOP00000104948
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6100,161,897 - 100,182,259 (-)Ensembl
RefSeq Acc Id: NM_030874   ⟹   NP_110501
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86100,161,024 - 100,182,214 (-)NCBI
mRatBN7.2694,425,339 - 94,446,534 (-)NCBI
Protein Sequences
Protein RefSeqs NP_110501 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK07473 (Get FASTA)   NCBI Sequence Viewer  
  EDM03639 (Get FASTA)   NCBI Sequence Viewer  
  EDM03640 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000006913
GenBank Protein Q99P55 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSRNOP00000006913   ⟸   ENSRNOT00000006913
RefSeq Acc Id: NP_110501   ⟸   NM_030874
- UniProtKB: Q99P55 (UniProtKB/Swiss-Prot),   F1LPB0 (UniProtKB/TrEMBL),   A6HC84 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000104948   ⟸   ENSRNOT00000171432
Protein Domains
Phosphatidic acid phosphatase type 2/haloperoxidase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99P55-F1-model_v2 AlphaFold Q99P55 1-430 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:727829 AgrOrtholog
BioCyc Gene G2FUF-37074 BioCyc
BioCyc Pathway PWY3DJ-11470 [sphingosine and sphingosine-1-phosphate metabolism] BioCyc
BioCyc Pathway Image PWY3DJ-11470 BioCyc
Ensembl Genes ENSRNOG00000005175 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000006913 ENTREZGENE
Gene3D-CATH Phosphatidic acid phosphatase type 2/haloperoxidase UniProtKB/Swiss-Prot
InterPro P_Acid_Pase_2/haloperoxi_sf UniProtKB/Swiss-Prot
  P_Acid_Pase_2/haloperoxidase UniProtKB/Swiss-Prot
NCBI Gene 81536 ENTREZGENE
PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHATASE 1 UniProtKB/Swiss-Prot
  SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE UniProtKB/Swiss-Prot
Pfam PAP2 UniProtKB/Swiss-Prot
PhenoGen Sgpp1 PhenoGen
RatGTEx ENSRNOG00000005175 RatGTEx
SMART acidPPc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48317 UniProtKB/Swiss-Prot
UniProt A0ABK0LSC8_RAT UniProtKB/TrEMBL
  A6HC84 ENTREZGENE, UniProtKB/TrEMBL
  A6HC85_RAT UniProtKB/TrEMBL
  F1LPB0 ENTREZGENE, UniProtKB/TrEMBL
  Q99P55 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-04-22 Sgpp1  sphingosine-1-phosphate phosphatase 1  LOC81536  sphingosine-1-phosphate phosphohydrolase  Symbol and Name updated to reflect Human and Mouse nomenclature 625702 APPROVED