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Gene: Cntnap1 (contactin associated protein 1) Rattus norvegicus

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Symbol:

Cntnap1

Name:

contactin associated protein 1

RGD ID:

70902

Description:

Enables SH3 domain binding activity. Predicted to be involved in several processes, including myelination; neuronal action potential propagation; and synapse organization. Predicted to act upstream of or within neuron projection development. Located in paranode region of axon. Is active in presynaptic active zone. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome. Orthologous to human CNTNAP1 (contactin associated protein 1); INTERACTS WITH 17beta-estradiol 3-benzoate; 6-propyl-2-thiouracil; ammonium chloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Caspr; caspr1; contactin-associated protein 1; neurexin 4; neurexin IV; neurexin-4; p190; paranodin

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CNTNAP1 (contactin associated protein 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB
Mus musculus (house mouse):	Cntnap1 (contactin associated protein-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cntnap1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CNTNAP1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CNTNAP1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cntnap1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CNTNAP1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CNTNAP1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cntnap1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cntnap1 (contactin associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	OR5H6 (olfactory receptor family 5 subfamily H member 6)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	CNTNAP1 (contactin associated protein 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cntnap1 (contactin associated protein-like 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cntnap1 (contactin associated protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Nrx-IV	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Nrx-IV	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nlr-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nlr-1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cntnap1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cntnap1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	86,610,140 - 86,625,896 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	86,611,890 - 86,631,730 (+)	Ensembl				GRCr8
mRatBN7.2	10	86,109,850 - 86,125,612 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	86,111,643 - 86,125,611 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	91,148,069 - 91,162,038 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	90,626,872 - 90,640,834 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	86,020,029 - 86,033,999 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	89,087,904 - 89,103,615 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	89,089,646 - 89,103,614 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	88,888,142 - 88,902,111 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	90,185,756 - 90,210,837 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	84,829,245 - 84,843,011 (+)	NCBI		Celera
RGSC_v3.1	10	90,212,559 - 90,225,201 (+)	NCBI
Cytogenetic Map	10	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 4E (ISO)

Congenital Hypomyelinating Neuropathy 3 (ISO)

distal arthrogryposis type 1A (ISO)

fetal akinesia deformation sequence syndrome 1 (ISO)

genetic disease (ISO)

Lethal Congenital Contracture Syndrome 7 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17beta-estradiol (ISO)

17beta-estradiol 3-benzoate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

ammonium chloride (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

bathocuproine disulfonic acid (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

Butylbenzyl phthalate (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

carmustine (ISO)

cisplatin (ISO)

clothianidin (ISO)

copper atom (ISO)

copper(0) (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dicrotophos (ISO)

diethyl phthalate (EXP)

diisobutyl phthalate (EXP)

diisononyl phthalate (EXP)

disulfiram (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

furan (EXP)

gentamycin (EXP)

inulin (ISO)

ivermectin (ISO)

L-ascorbic acid (ISO)

lidocaine (EXP)

lipopolysaccharide (ISO)

methoxychlor (EXP)

mifepristone (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel sulfate (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

pyrrolidine dithiocarbamate (ISO)

quercetin (ISO)

rotenone (EXP)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

thiram (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axonogenesis (ISO)

cell adhesion (IEA)

central nervous system myelination (ISO,ISS)

cytoskeleton organization (ISO,ISS)

mitochondrion organization (ISO)

myelination (IBA,ISO,TAS)

myelination in peripheral nervous system (ISO,ISS)

nervous system development (IBA)

neuromuscular junction development, skeletal muscle fiber (ISO)

neuromuscular process (ISO)

neuromuscular process controlling balance (ISO,ISS)

neuromuscular process controlling posture (ISO,ISS)

neuron projection development (ISO)

neuron projection morphogenesis (IBA,ISO,ISS)

neuronal action potential propagation (ISO,ISS)

paranodal junction assembly (ISO,ISS,TAS)

paranodal junction maintenance (ISO)

postsynaptic density organization (ISO)

protein localization to juxtaparanode region of axon (ISO,ISS)

protein localization to paranode region of axon (ISO,ISS)

regulation of synapse maturation (ISO)

signal transduction (IBA)

Cellular Component

axon (IDA)

cell junction (IEA)

glutamatergic synapse (ISO)

main axon (IEA)

membrane (IEA)

paranodal junction (IEA)

paranode region of axon (IDA,ISO)

plasma membrane (IBA)

presynaptic active zone (EXP,IDA)

synapse (IBA)

Molecular Function

protein binding (IPI,ISO)

SH3 domain binding (IDA,IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Neurofascin is a glial receptor for the paranodin/Caspr-contactin axonal complex at the axoglial junction.	Charles P, etal., Curr Biol 2002 Feb 5;12(3):217-20.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Paranodin, a glycoprotein of neuronal paranodal membranes.	Menegoz M, etal., Neuron 1997 Aug;19(2):319-31.
4.	Gene Data Set	MGD Curation, June 12, 2002
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	The proteome of the presynaptic active zone: from docked synaptic vesicles to adhesion molecules and maxi-channels.	Morciano M, etal., J Neurochem. 2009 Feb;108(3):662-75. doi: 10.1111/j.1471-4159.2008.05824.x.
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	Contactin-associated protein (Caspr) 2 interacts with carboxypeptidase E in the CNS.	Oiso S, etal., J Neurochem. 2009 Apr;109(1):158-67. Epub 2009 Jan 23.
9.	Identification of a novel contactin-associated transmembrane receptor with multiple domains implicated in protein-protein interactions.	Peles E, etal., EMBO J 1997 Mar 3;16(5):978-88.
10.	Juxtaparanodal clustering of Shaker-like K+ channels in myelinated axons depends on Caspr2 and TAG-1.	Poliak S, etal., J Cell Biol. 2003 Sep 15;162(6):1149-60. Epub 2003 Sep 8.
11.	Caspr2, a new member of the neurexin superfamily, is localized at the juxtaparanodes of myelinated axons and associates with K+ channels.	Poliak S, etal., Neuron. 1999 Dec;24(4):1037-47.
12.	GOA pipeline	RGD automated data pipeline
13.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:9396755	PMID:11512672	PMID:12975355	PMID:14592966	PMID:15102918	PMID:16551741	PMID:17634366	PMID:19170162	PMID:19458237	PMID:19816196	PMID:20188654
PMID:21031018	PMID:21700703	PMID:22223644	PMID:24319099	PMID:25378149	PMID:27583434	PMID:27818385	PMID:28374019	PMID:29476059	PMID:29895952	PMID:30010864

Genomics

Comparative Map Data

Cntnap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	86,610,140 - 86,625,896 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	86,611,890 - 86,631,730 (+)	Ensembl				GRCr8
mRatBN7.2	10	86,109,850 - 86,125,612 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	86,111,643 - 86,125,611 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	91,148,069 - 91,162,038 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	90,626,872 - 90,640,834 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	86,020,029 - 86,033,999 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	89,087,904 - 89,103,615 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	89,089,646 - 89,103,614 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	88,888,142 - 88,902,111 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	90,185,756 - 90,210,837 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	84,829,245 - 84,843,011 (+)	NCBI		Celera
RGSC_v3.1	10	90,212,559 - 90,225,201 (+)	NCBI
Cytogenetic Map	10	q31	NCBI

CNTNAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	42,682,531 - 42,699,993 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	42,682,531 - 42,699,993 (+)	Ensembl			hg38	GRCh38
GRCh37	17	40,834,549 - 40,852,011 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	38,088,158 - 38,105,358 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	17	38,088,157 - 38,105,358	NCBI
Celera	17	37,490,091 - 37,507,480 (+)	NCBI		Celera
Cytogenetic Map	17	q21.2	NCBI
HuRef	17	36,599,698 - 36,617,086 (+)	NCBI		HuRef
CHM1_1	17	41,070,271 - 41,087,626 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	43,539,668 - 43,557,130 (+)	NCBI		T2T-CHM13v2.0

Cntnap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	101,065,429 - 101,081,550 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	101,061,349 - 101,081,550 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	101,174,617 - 101,190,724 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	101,170,523 - 101,190,724 (+)	Ensembl			mm10	GRCm38
MGSCv37	11	101,037,431 - 101,052,034 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	100,988,649 - 101,005,937 (+)	NCBI		MGSCv36	mm8
Celera	11	112,472,244 - 112,486,836 (+)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	64.33	NCBI

Cntnap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	16,536,416 - 16,547,213 (+)	Ensembl
ChiLan1.0	NW_004955451	16,535,924 - 16,547,800 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNTNAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	22,286,159 - 22,302,308 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	24,176,186 - 24,194,783 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	14,618,294 - 14,635,193 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	14,842,577 - 14,858,896 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	14,842,577 - 14,858,896 (-)	Ensembl			panPan2	panpan1.1

CNTNAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	20,293,184 - 20,307,708 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	20,293,170 - 20,307,662 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	19,755,142 - 19,769,755 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	21,012,211 - 21,026,834 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	21,012,224 - 21,026,866 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	19,798,156 - 19,812,758 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	20,063,318 - 20,077,931 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	20,167,329 - 20,181,942 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cntnap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	19,645,016 - 19,662,302 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	17,412,878 - 17,429,041 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	17,412,837 - 17,430,123 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNTNAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	20,141,641 - 20,157,044 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	12	20,141,222 - 20,157,341 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	20,378,999 - 20,386,573 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CNTNAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	63,590,043 - 63,606,805 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	63,591,119 - 63,607,579 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666077	34,383,133 - 34,399,997 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cntnap1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	1,470,760 - 1,481,973 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624795	1,470,234 - 1,482,066 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cntnap1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	60,474,093 - 60,487,875 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cntnap1
93 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	519
Count of miRNA genes:	218
Interacting mature miRNAs:	280
Transcripts:	ENSRNOT00000027505
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	51071897	96071897	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
8657410	Bp374	Blood pressure QTL 374			heart left ventricle size trait (VT:0002753)	heart left ventricle end-diastolic diameter (CMO:0000982)	10	67476608	107713808	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	35509383	91417879	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63719161	107713808	Rat
631555	Bp134	Blood pressure QTL 134		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	81012077	91729860	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	58073360	103073360	Rat
12903252	Cm113	Cardiac mass QTL 113		0.047	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	54296336	99451733	Rat
4889948	Bss91	Bone structure and strength QTL 91	4		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	10	83061236	92869129	Rat
61463	Bp12	Blood pressure QTL 12	6.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	41831278	86831278	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50464802	95464802	Rat
2298548	Neuinf7	Neuroinflammation QTL 7	3.4		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	10	64939013	107713808	Rat
1302404	Cia27	Collagen induced arthritis QTL 27	2.6	0.0045	joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	10	76951790	107713808	Rat
1300107	Rf18	Renal function QTL 18	3.41		urine output (VT:0003620)	timed urine volume (CMO:0000260)	10	79272424	102982300	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44939359	89939359	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45529164	96099749	Rat
70168	Eae12	Experimental allergic encephalomyelitis QTL 12		0.0009	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	73599825	107713808	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	54296227	107713808	Rat
10450495	Bp383	Blood pressure QTL 383		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76743133	95464802	Rat
12903269	Am15	Aortic mass QTL 15		0.042	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
10450493	Bp382	Blood pressure QTL 382		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50860288	95860288	Rat
12903266	Cm114	Cardiac mass QTL 114		0.02	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	66817119	107713808	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2292617	Ept18	Estrogen-induced pituitary tumorigenesis QTL 18	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73950353	96620293	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14991535	86964295	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62556066	107556066	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	42823274	87823274	Rat
12880372	Am12	Aortic mass QTL 12		0.003	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
70193	Mcs7	Mammary carcinoma susceptibility QTL 7	2.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62556066	107556066	Rat
12880375	Kidm66	Kidney mass QTL 66		0.009	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44939359	89939359	Rat
1357344	Bp249	Blood pressure QTL 249		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	67241334	98502431	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
12880370	Cm105	Cardiac mass QTL 105		0.008	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	42823274	87823274	Rat
12880371	Cm106	Cardiac mass QTL 106		0.007	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61843496	98710773	Rat
11565453	Kidm58	Kidney mass QTL 58		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
1359017	Hrtrt21	Heart rate QTL 21	2.4		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	10	73695339	97272278	Rat
7387312	Bw125	Body weight QTL 125	3	0.0047	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight (CMO:0000356)	10	65390777	107713808	Rat
6893357	Bw102	Body weight QTL 102	0.5	0.36	body mass (VT:0001259)	body weight (CMO:0000012)	10	81012077	101828297	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22931373	91127454	Rat
2306793	Ean5	Experimental allergic neuritis QTL 5	4.7		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	73049656	94495280	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	49495492	94495492	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68920187	107713808	Rat
1358915	Stresp7	Stress response QTL 7	3.52		blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	65307813	107713808	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61843496	106843496	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29800910	91417879	Rat
6893366	Bw106	Body weight QTL 106	0.3	0.47	body mass (VT:0001259)	body weight (CMO:0000012)	10	70698731	107713808	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	55307972	93608131	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61843496	100198886	Rat
8552805	Bw145	Body weight QTL 145	2.2		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	10	43608793	88608793	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49943710	94943710	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44939359	89939359	Rat
1581559	Eae18	Experimental allergic encephalomyelitis QTL 18		0.00002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	10	66108888	107555881	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61843496	100198886	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47869129	92869129	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
12880055	Am11	Aortic mass QTL 11		0.004	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	84503487	96432422	Rat
2292438	Bp311	Blood pressure QTL 311			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76743133	95604677	Rat
2301398	Kidm38	Kidney mass QTL 38		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	84503487	96432422	Rat
2292436	Bp310	Blood pressure QTL 310			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50604677	95604677	Rat
6893342	Cm78	Cardiac mass QTL 78	0.1	0.88	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	35509383	88177745	Rat
1600367	Mcs15	Mammary carcinoma susceptibility QTL 15	4.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
1358188	Ept9	Estrogen-induced pituitary tumorigenesis QTL 9	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73950353	96620293	Rat
631537	Oia4	Oil induced arthritis QTL 4			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	76128947	107713808	Rat
634354	Rends3	Renal damage susceptibility QTL 3		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	10	61997479	106997479	Rat
2301405	Cm69	Cardiac mass QTL 69		0.031	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Markers in Region

BE108457

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	86,113,966 - 86,114,138 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	89,091,970 - 89,092,141	NCBI	Rnor6.0
Rnor_5.0	10	88,890,466 - 88,890,637	UniSTS	Rnor5.0
RGSC_v3.4	10	90,199,189 - 90,199,360	UniSTS	RGSC3.4
Celera	10	84,831,368 - 84,831,539	UniSTS
RH 3.4 Map	10	834.2	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

RH140759

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	86,125,242 - 86,125,483 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	89,103,246 - 89,103,486	NCBI	Rnor6.0
Rnor_5.0	10	88,901,742 - 88,901,982	UniSTS	Rnor5.0
RGSC_v3.4	10	90,210,468 - 90,210,708	UniSTS	RGSC3.4
Celera	10	84,842,642 - 84,842,882	UniSTS
RH 3.4 Map	10	877.1	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

BE097407

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	86,109,055 - 86,109,220 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	89,087,061 - 89,087,225	NCBI	Rnor6.0
Rnor_5.0	10	88,885,557 - 88,885,721	UniSTS	Rnor5.0
RGSC_v3.4	10	90,194,281 - 90,194,445	UniSTS	RGSC3.4
Celera	10	84,826,630 - 84,826,794	UniSTS
RH 3.4 Map	10	836.2	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

BM391105

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	86,110,411 - 86,110,562 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	89,088,417 - 89,088,567	NCBI	Rnor6.0
Rnor_5.0	10	88,886,913 - 88,887,063	UniSTS	Rnor5.0
RGSC_v3.4	10	90,195,637 - 90,195,787	UniSTS	RGSC3.4
Celera	10	84,827,986 - 84,828,136	UniSTS
RH 3.4 Map	10	834.1	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	89	59	6	352	189	11	141	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_032061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF000114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF393814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB610334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U87224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000027505 ⟹ ENSRNOP00000027505

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	86,611,890 - 86,625,892 (+)	Ensembl
mRatBN7.2 Ensembl	10	86,111,643 - 86,125,611 (+)	Ensembl
Rnor_6.0 Ensembl	10	89,089,646 - 89,103,614 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122257 ⟹ ENSRNOP00000107259

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	86,613,048 - 86,625,895 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000147033 ⟹ ENSRNOP00000100542

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	86,611,890 - 86,625,927 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000170087 ⟹ ENSRNOP00000105521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	86,611,890 - 86,631,730 (+)	Ensembl

RefSeq Acc Id:

NM_032061 ⟹ NP_114450

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,611,926 - 86,625,896 (+)	NCBI
mRatBN7.2	10	86,111,643 - 86,125,612 (+)	NCBI
Rnor_6.0	10	89,089,646 - 89,103,615 (+)	NCBI
Rnor_5.0	10	88,888,142 - 88,902,111 (+)	NCBI
RGSC_v3.4	10	90,185,756 - 90,210,837 (+)	RGD
Celera	10	84,829,245 - 84,843,011 (+)	RGD

Sequence:

show sequence

GATTTTGACTGGGGGTAGGAGAAAGGGAAGGGTGGGTGAGGACGGAAAAAGCAGCATCGGTCAG
CCGCGAACCCCAGGAGAAAAGCTGGGGGCCTGAGCCAGAACCGGAGCCCTAGCGGCACAAGGCA
GACACCCAGGGTTGGTCAGCTCCGCATGATGAGTCTCCGGCTTTTCAGCATTCTGCTCGCCGCT
GTGGTCTCTGGAGCCCAGGGCTGGGGCTACTATGGCTGCAATGAGGAGCTGGTGGGGCCTCTGT
ATGCACGGTCTCTGGGTGCTTCCTCCTACTATGGACTCTTTACCACAGCCCGCTTTGCCCGGCT
ACACGGCATCAGTGGATGGTCGCCCCGGATTGGGGACCCGAATCCCTGGCTCCAGATAGACTTA
ATGAAGAAGCATCGAATCCGGGCTGTGGCCACACAGGGAGCCTTTAATTCTTGGGATTGGGTCA
CACGTTACATGCTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTCTACCAACAAGGGCA
CAACGCGACCTTCTTCGGTAATGTCAACGACTCGGCGGTGGTACGCCATGACCTGCACTACCAT
TTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCCCGCGGCAAGATTGGCTTGA
GGCTGGGCATCTACGGTTGTCCCTACACGTCCAACATCCTGTATTTTGACGGCGATGATGCCAT
TTCATACCGCTTCCAGCGAGGGGCCAGTCAAAGTCTTTGGGACGTGTTCGCTTTTAGTTTCAAG
ACAGAGGAGAAGGACGGGCTGCTGTTGCACACCGAAGGCTCCCAGGGGGATTATGTGACGCTTG
AACTGCAAGGAGCACACCTGCTGCTGCACATGAGCCTGGGCAGCAGCCCCATCCAGCCGAGACC
TGGTCACACCACGGTGAGCGCTGGTGGCGTACTTAATGACCTAAGCTGGCATTATGTGCGGGTG
GACCGATACGGCCGAGAAGCAAATCTCACCCTGGATGGTTACGTACATCGCTTTGTGCTCAACG
GCGACTTTGAAAGGCTGAATCTCGAAAATGAGATATTCATCGGAGGTCTAGTGGGCGCAGCGCG
TAAGAACCTGGCCTACCGCCATAACTTCCGTGGCTGTATAGAAAACGTGATCTACAACCGGATC
AACATAGCTGAAATGGCAGTGCAGCGCCATTCGCGGATCACCTTCGAGGGTAATGTGGCTTTCC
GGTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCC
TGGCTTTCCACGTCGAGGCCGCCTTGCTGTCTCCTTCCGCTTCCGCACCTGGGACCTCACAGGG
CTGCTCCTTTTCTCCCGCTTGGGGGATGGGCTGGGTCATGTGGAGCTGATGCTTAGTGAAGGGC
AAGTCAATGTATCCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTTGCTGCGGGGTACCGCCT
GAATGATGGCTTCTGGCATGAGGTGAACTTTGTGGCACAGGAAAACCATGCGGTCATCAGTATT
GATGATGTGGAGGGGGCAGAGGTCAGGGTATCATACCCACTGCTGATCCGCACAGGGACTTCAT
ACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATT
CCATGGCTGCATGGAGCTGCTCAAGGTGGATGGTCAACTGGTCAACCTCACTCTGGTAGAGTTT
CGGAAGCTTGGTTACTTTGCTGAGGTCCTCTTTGACACATGTGGCATCACAGACAGATGCAGCC
CTAATATGTGTGAGCATGATGGGCGCTGCTACCAGTCTTGGGATGACTTCATCTGCTACTGCGA
ACTCACCGGCTACAAGGGAGTTACCTGCCATGAACCATTGTATAAGGAGTCCTGTGAAGCCTAT
CGCCTCAGCGGGAAATATTCTGGAAATTACACCATTGATCCTGATGGCAGTGGACCCCTGAAAC
CATTTGTAGTGTATTGTGATATCCGAGAGAACCGAGCATGGACAGTTGTGCGACATGACAGGCT
ATGGACCACTCGAGTGACAGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGG
AATGCCTCCTGGGAGGAAGTCAGTGCTCTGGCCAATGCTTCCCAGCACTGTGAGCAGTGGATCG
AGTTCTCCTGCTACAATTCCCGGCTGCTCAACACTGCAGGAGGCTACCCCTACAGCTTTTGGAT
TGGCCGAAATGAAGAACAGCATTTCTACTGGGGAGGCTCCCAGCCTGGGATCCAACGCTGTGCC
TGTGGGCTGGACCAGAGCTGTATAGACCCTGCACTGCACTGCAACTGCGATGCTGACCAGCCAC
AGTGGAGAACAGACAAGGGGCTCCTGACCTTTGTGGACCATCTGCCTGTCACTCAGGTAGTGAT
AGGTGACACAAACCGCTCCAGCTCTGAAGCTCAGTTCTTCCTGAGGCCTCTGCGCTGTTATGGT
GACCGCAATTCCTGGAACACTATCTCCTTCCGCACTGGAGCTGCACTGCGTTTCCCTCCAATCC
GTGCCAACCACAGCCTTGATGTCTCCTTCTACTTCAGGACCTCGGCTCCCTCAGGAGTCTTCCT
AGAGAACATGGGGGGTCCTTTCTGCCAGTGGCGCCGACCTTACGTGAGAGTGGAGCTCAACACA
TCCCGGGATGTGGTCTTTGCCTTTGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCAG
ATGACTTCGAGTTCAATGATGACGAGTGGCATTTGGTCCGGGCTGAAATCAACGTGAAGCAGGC
CCGGCTGCGAGTGGACCATCGGCCCTGGGTGCTAAGGCCCATGCCCCTGCAGACGTACATCTGG
CTGGAGTATGACCAACCCCTCTATGTGGGATCTGCAGAGCTTAAGAGGCGCCCATTTGTGGGGT
GCTTGAGGGCCATGCGTTTGAATGGAGTGACTCTGAACTTGGAGGGTCGTGCCAATGCCTCCGA
GGGCACCTTCCCCAACTGCACGGGCCACTGCACCCACCCCCGGTTCCCCTGTTTCCACGGAGGA
CGCTGTGTGGAGCGATACAGCTACTACACGTGTGACTGTGACCTCACAGCTTTTGATGGACCAT
ATTGTAATCACGATATTGGTGGATTCTTTGAGACTGGCACATGGATGCGCTATAACCTCCAGTC
AGCACTGCGTTCTGCGGCCCAGGAGTTCTCTCACATGCTGAGCCGGCCGGTACCGGGCTATGAG
CCTGGCTATATCCCAGGCTACGACACTCCTGGTTACGTGCCTGGGTACCATGGTCCTGGGTACC
GCCTACCCGACTACCCAAGGCCTGGCCGGCCAGTGCCCGGATACCGGGGGCCCGTGTACAATGT
TACTGGAGAGGAGGTCTCCTTTAGCTTCAGCACCAGCTCTGCTCCTGCAGTCCTGCTCTACGTC
AGCTCCTTTGTGCGTGACTACATGGCCGTGCTCATCAAGGAAGATGGGACCCTACAGCTTCGCT
ATCAGCTGGGCACCAGTCCCTATGTGTACCAGCTAACCACCCGGCCAGTGACCGATGGCCAACC
CCATAGTGTCAACATCACCCGGGTCTACCGAAACCTCTTTATCCAGGTGGACTACTTCCCGCTG
ACAGAACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCCCCCAAGGCCTTGTATCTAG
GGCGTGTGATGGAGACAGGAGTCATTGACCCAGAGATTCAGCGGTACAACACCCCAGGTTTCTC
AGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCT
CGCCCCATGACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCGGAGTCTAACT
GTGGCGCTATGCCACGCCTTGTCTCCGAGGTGCCACCAGAGCTTGATCCCTGGTACCTGCCCCC
AGATTTCCCATACTACCATGACGACGGATGGATTGCCATACTCTTAGGTTTTTTGGTGGCCTTC
CTGCTGCTGGGGCTTGTGGGAATGCTGGTGCTGTTCTATCTGCAAAATCATCGATACAAGGGCT
CCTATCACACCAACGAGCCCAAGGCCACCCATGATTCCCACCCTGGCGGCAAAGCTCCCCTACC
TCCCTCAGGCCCTGCCCAGGCCCCTGCCCCCACTCCAGCTCCCACCCAGGTTCCGACCCCAGCC
CCAGCCCCAGCCTCTGGCCCAGGCCCCAGGGACCAGAACCTCCCCCAGATCTTGGAGGAGTCCA
GGTCTGAATGAGTCACAAGGGCTTCAGGGACCAAGGCCAACTCCTCTAAGTCCCTTCAGCTCCT
GCCTCTCCTCTCCCCTGTCAGGGACATTTGGCTCTTCTTAGCAGGCTCTGTTCACCAGGAGGAT
CCCCTCTTGCCAAGTTTGGTGTGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGTCTCAC
TGCCTAAACCAATGCCCTGCCCCCACCCCCCACCCCAGCTCCTGGCTGTTTGCCTGCCCTACGG
GAGAAAGCTCATGGAGCTGAGGCGGGCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGAT
TAACAACCAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGGGTATTATCAGCAGGGACAGA
TGTGGGGGATCGAGGGGCTGCACAGGGCAGGCAGGGAGGGAGGGAGGAGGCTGCTAAAACACAC
CCTGGAGCCTCCCCCCTGCCCTGCTGACCGGCTGTCTTCCATCTGCTTCCTCTCAGCTGGGGTT
GAGGGAAGAACTTCATCCCCACCCCCCACCTCACCCAACCCTTTTTGTTCTTACAGAGACCAAG
AGGCCTCAGCTTAGCACTTTAGTACCTCCACTGCTTCACATGCTTTAGCCAAAGCCATAAAAAG
CCTGCAAGTAGAAGAAATAATGCAGACCCTGCCCAGCCAGTCCTCTGCTCCTCCACCCCTTTCC
AAAATACGCAATAGCCTGGGTGCCTGTGTGCAGGCCTGGCCCCCTCCGTGCATGAGGAGCCCCC
CTCCCCCGCTCAGAGATGCTGCGTGTTCGTCCAGGAGGTCATATTCTTTATATATATTTTTTGT
TGCAAAGCCTCTCTCTAGAGAACTATATATTACTCTAATTTTTTAATTATCTGTTTATATATAA
AAGAACTCAGTGGGCCGTCCTGTGCTGTGCCCAGTTTGTAGTGAGCTCCTTCTGTGTTGGATGT
CTCATGAGTCCTGCCAGCCACTCACCCGCCTGCCGGGCCTCCATTCTAGAGCAGGGCAGAGCCC
GCTGTGCCCTCACCTGAGCAGGTTCAATAAAAGCAGAGTGGCAGAGCCCCAAAAAAAAAAAAAA
AAA

hide sequence

RefSeq Acc Id:

XM_006247431 ⟹ XP_006247493

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,612,304 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,112,013 - 86,125,612 (+)	NCBI
Rnor_6.0	10	89,089,911 - 89,103,609 (+)	NCBI
Rnor_5.0	10	88,888,142 - 88,902,111 (+)	NCBI

Sequence:

show sequence

TCTGGAGTTTACTGGGCGAGTTCTGCACCGCATTGCGGCTGGGTGGTCGCCGGTCCTTCCCGCA
CGCGCCGGCTCGCTCCCATCTTTCCCTGCCTCTCCCCAGCGCTCCGCAATGCAGCTCTGAGGCT
GCTGCGCGCGCGCCGCCGCCGTCTGGGGCTGGTCTCTGATCTGAGGAACCAGTCAACCCAGGGG
ATTTGGAGCTGTTAATCCAAGCGGGAGCTGGTGCCTAGGTTTGAGGTTAGGGTTGGCTATGGCT
GCAATGAGGAGCTGGTGGGGCCTCTGTATGCACGGTCTCTGGGTGCTTCCTCCTACTATGGACT
CTTTACCACAGCCCGCTTTGCCCGGCTACACGGCATCAGTGGATGGTCGCCCCGGATTGGGGAC
CCGAATCCCTGGCTCCAGATAGACTTAATGAAGAAGCATCGAATCCGGGCTGTGGCCACACAGG
GAGCCTTTAATTCTTGGGATTGGGTCACACGTTACATGCTGCTCTACGGGGACCGTGTGGACAG
CTGGACACCATTCTACCAACAAGGGCACAACGCGACCTTCTTCGGTAATGTCAACGACTCGGCG
GTGGTACGCCATGACCTGCACTACCATTTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCT
GGAACCCCCGCGGCAAGATTGGCTTGAGGCTGGGCATCTACGGTTGTCCCTACACGTCCAACAT
CCTGTATTTTGACGGCGATGATGCCATTTCATACCGCTTCCAGCGAGGGGCCAGTCAAAGTCTT
TGGGACGTGTTCGCTTTTAGTTTCAAGACAGAGGAGAAGGACGGGCTGCTGTTGCACACCGAAG
GCTCCCAGGGGGATTATGTGACGCTTGAACTGCAAGGAGCACACCTGCTGCTGCACATGAGCCT
GGGCAGCAGCCCCATCCAGCCGAGACCTGGTCACACCACGGTGAGCGCTGGTGGCGTACTTAAT
GACCTAAGCTGGCATTATGTGCGGGTGGACCGATACGGCCGAGAAGCAAATCTCACCCTGGATG
GTTACGTACATCGCTTTGTGCTCAACGGCGACTTTGAAAGGCTGAATCTCGAAAATGAGATATT
CATCGGAGGTCTAGTGGGCGCAGCGCGTAAGAACCTGGCCTACCGCCATAACTTCCGTGGCTGT
ATAGAAAACGTGATCTACAACCGGATCAACATAGCTGAAATGGCAGTGCAGCGCCATTCGCGGA
TCACCTTCGAGGGTAATGTGGCTTTCCGGTGCTTGGATCCCGTTCCACACCCCATCAACTTCGG
AGGCCCTCACAACTTCGTCCAAGTGCCTGGCTTTCCACGTCGAGGCCGCCTTGCTGTCTCCTTC
CGCTTCCGCACCTGGGACCTCACAGGGCTGCTCCTTTTCTCCCGCTTGGGGGATGGGCTGGGTC
ATGTGGAGCTGATGCTTAGTGAAGGGCAAGTCAATGTATCCATCGCGCAGACTGGCCGCAAGAA
GCTTCAGTTTGCTGCGGGGTACCGCCTGAATGATGGCTTCTGGCATGAGGTGAACTTTGTGGCA
CAGGAAAACCATGCGGTCATCAGTATTGATGATGTGGAGGGGGCAGAGGTCAGGGTATCATACC
CACTGCTGATCCGCACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATG
GGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGTGGATGGTCAA
CTGGTCAACCTCACTCTGGTAGAGTTTCGGAAGCTTGGTTACTTTGCTGAGGTCCTCTTTGACA
CATGTGGCATCACAGACAGATGCAGCCCTAATATGTGTGAGCATGATGGGCGCTGCTACCAGTC
TTGGGATGACTTCATCTGCTACTGCGAACTCACCGGCTACAAGGGAGTTACCTGCCATGAACCA
TTGTATAAGGAGTCCTGTGAAGCCTATCGCCTCAGCGGGAAATATTCTGGAAATTACACCATTG
ATCCTGATGGCAGTGGACCCCTGAAACCATTTGTAGTGTATTGTGATATCCGAGAGAACCGAGC
ATGGACAGTTGTGCGACATGACAGGCTATGGACCACTCGAGTGACAGGTTCCAGCATGGACCGG
CCCTTTCTGGGGGCCATCCAATACTGGAATGCCTCCTGGGAGGAAGTCAGTGCTCTGGCCAATG
CTTCCCAGCACTGTGAGCAGTGGATCGAGTTCTCCTGCTACAATTCCCGGCTGCTCAACACTGC
AGGAGGCTACCCCTACAGCTTTTGGATTGGCCGAAATGAAGAACAGCATTTCTACTGGGGAGGC
TCCCAGCCTGGGATCCAACGCTGTGCCTGTGGGCTGGACCAGAGCTGTATAGACCCTGCACTGC
ACTGCAACTGCGATGCTGACCAGCCACAGTGGAGAACAGACAAGGGGCTCCTGACCTTTGTGGA
CCATCTGCCTGTCACTCAGGTAGTGATAGGTGACACAAACCGCTCCAGCTCTGAAGCTCAGTTC
TTCCTGAGGCCTCTGCGCTGTTATGGTGACCGCAATTCCTGGAACACTATCTCCTTCCGCACTG
GAGCTGCACTGCGTTTCCCTCCAATCCGTGCCAACCACAGCCTTGATGTCTCCTTCTACTTCAG
GACCTCGGCTCCCTCAGGAGTCTTCCTAGAGAACATGGGGGGTCCTTTCTGCCAGTGGCGCCGA
CCTTACGTGAGAGTGGAGCTCAACACATCCCGGGATGTGGTCTTTGCCTTTGATATTGGCAATG
GGGATGAGAACCTGACAGTGCACTCAGATGACTTCGAGTTCAATGATGACGAGTGGCATTTGGT
CCGGGCTGAAATCAACGTGAAGCAGGCCCGGCTGCGAGTGGACCATCGGCCCTGGGTGCTAAGG
CCCATGCCCCTGCAGACGTACATCTGGCTGGAGTATGACCAACCCCTCTATGTGGGATCTGCAG
AGCTTAAGAGGCGCCCATTTGTGGGGTGCTTGAGGGCCATGCGTTTGAATGGAGTGACTCTGAA
CTTGGAGGGTCGTGCCAATGCCTCCGAGGGCACCTTCCCCAACTGCACGGGCCACTGCACCCAC
CCCCGGTTCCCCTGTTTCCACGGAGGACGCTGTGTGGAGCGATACAGCTACTACACGTGTGACT
GTGACCTCACAGCTTTTGATGGACCATATTGTAATCACGATATTGGTGGATTCTTTGAGACTGG
CACATGGATGCGCTATAACCTCCAGTCAGCACTGCGTTCTGCGGCCCAGGAGTTCTCTCACATG
CTGAGCCGGCCGGTACCGGGCTATGAGCCTGGCTATATCCCAGGCTACGACACTCCTGGTTACG
TGCCTGGGTACCATGGTCCTGGGTACCGCCTACCCGACTACCCAAGGCCTGGCCGGCCAGTGCC
CGGATACCGGGGGCCCGTGTACAATGTTACTGGAGAGGAGGTCTCCTTTAGCTTCAGCACCAGC
TCTGCTCCTGCAGTCCTGCTCTACGTCAGCTCCTTTGTGCGTGACTACATGGCCGTGCTCATCA
AGGAAGATGGGACCCTACAGCTTCGCTATCAGCTGGGCACCAGTCCCTATGTGTACCAGCTAAC
CACCCGGCCAGTGACCGATGGCCAACCCCATAGTGTCAACATCACCCGGGTCTACCGAAACCTC
TTTATCCAGGTGGACTACTTCCCGCTGACAGAACAGAAGTTCTCTCTCCTGGTGGACAGCCAGC
TGGACTCCCCCAAGGCCTTGTATCTAGGGCGTGTGATGGAGACAGGAGTCATTGACCCAGAGAT
TCAGCGGTACAACACCCCAGGTTTCTCAGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCT
CCTCTCAAGACCCATTTCCGAACCCCTCGCCCCATGACTGCTGAGCTGGCGGAGGCCATGCGGG
TTCAAGGAGAACTGTCGGAGTCTAACTGTGGCGCTATGCCACGCCTTGTCTCCGAGGTGCCACC
AGAGCTTGATCCCTGGTACCTGCCCCCAGATTTCCCATACTACCATGACGACGGATGGATTGCC
ATACTCTTAGGTTTTTTGGTGGCCTTCCTGCTGCTGGGGCTTGTGGGAATGCTGGTGCTGTTCT
ATCTGCAAAATCATCGATACAAGGGCTCCTATCACACCAACGAGCCCAAGGCCACCCATGATTC
CCACCCTGGCGGCAAAGCTCCCCTACCTCCCTCAGGCCCTGCCCAGGCCCCTGCCCCCACTCCA
GCTCCCACCCAGGTTCCGACCCCAGCCCCAGCCCCAGCCTCTGGCCCAGGCCCCAGGGACCAGA
ACCTCCCCCAGATCTTGGAGGAGTCCAGGTCTGAATGAGTCACAAGGGCTTCAGGGACCAAGGC
CAACTCCTCTAAGTCCCTTCAGCTCCTGCCTCTCCTCTCCCCTGTCAGGGACATTTGGCTCTTC
TTAGCAGGCTCTGTTCACCAGGAGGATCCCCTCTTGCCAAGTTTGGTGTGCAGAGCTACAGATG
GGACCAAAGGGAGTGGCCGAGTCTCACTGCCTAAACCAATGCCCTGCCCCCACCCCCCACCCCA
GCTCCTGGCTGTTTGCCTGCCCTACGGGAGAAAGCTCATGGAGCTGAGGCGGGCCTTTCCTGCC
ATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACCAAGGGCAGGGGAGATGAACTGCCTCCCTT
CCTGTGGGTATTATCAGCAGGGACAGATGTGGGGGATCGAGGGGCTGCACAGGGCAGGCAGGGA
GGGAGGGAGGAGGCTGCTAAAACACACCCTGGAGCCTCCCCCCTGCCCTGCTGACCGGCTGTCT
TCCATCTGCTTCCTCTCAGCTGGGGTTGAGGGAAGAACTTCATCCCCACCCCCCACCTCACCCA
ACCCTTTTTGTTCTTACAGAGACCAAGAGGCCTCAGCTTAGCACTTTAGTACCTCCACTGCTTC
ACATGCTTTAGCCAAAGCCATAAAAAGCCTGCAAGTAGAAGAAATAATGCAGACCCTGCCCAGC
CAGTCCTCTGCTCCTCCACCCCTTTCCAAAATACGCAATAGCCTGGGTGCCTGTGTGCAGGCCT
GGCCCCCTCCGTGCATGAGGAGCCCCCCTCCCCCGCTCAGAGATGCTGCGTGTTCGTCCAGGAG
GTCATATTCTTTATATATATTTTTTGTTGCAAAGCCTCTCTCTAGAGAACTATATATTACTCTA
ATTTTTTAATTATCTGTTTATATATAAAAGAACTCAGTGGGCCGTCCTGTGCTGTGCCCAGTTT
GTAGTGAGCTCCTTCTGTGTTGGATGTCTCATGAGTCCTGCCAGCCACTCACCCGCCTGCCGGG
CCTCCATTCTAGAGCAGGGCAGAGCCCGCTGTGCCCTCACCTGAGCAGGTTCAATAAAAGCAGA
GTGGCAGA

hide sequence

RefSeq Acc Id:

XM_008768122 ⟹ XP_008766344

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,611,928 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,111,618 - 86,125,612 (+)	NCBI
Rnor_6.0	10	89,089,622 - 89,103,609 (+)	NCBI

Sequence:

show sequence

GAGAGAGAGAGAGAGAGAGAGATTGATTTTGACTGGGGGTAGGAGAAAGGGAAGGGTGGGTGAG
GACGGAAAAAGCAGCATCGGTCAGCCGCGAACCCCAGGAGAAAAGCTGGGGGCCTGAGCCAGAA
CCGGAGCCCTAGCGGCACAAGGCAGACACCCAGGGTTGGTCAGCTCCGCATGATGAGTCTCCGG
CTTTTCAGCATTCTGCTCGCCGCTGTGGTCTCTGGAGCCCAGGGCTGGGGCTACTATGGCTGCA
ATGAGGAGCTGGTGGGGCCTCTGTATGCACGGTCTCTGGGTGCTTCCTCCTACTATGGACTCTT
TACCACAGCCCGCTTTGCCCGGCTACACGCCCTTGCCCCTTTTGTAGGCATCAGTGGATGGTCG
CCCCGGATTGGGGACCCGAATCCCTGGCTCCAGATAGACTTAATGAAGAAGCATCGAATCCGGG
CTGTGGCCACACAGGGAGCCTTTAATTCTTGGGATTGGGTCACACGTTACATGCTGCTCTACGG
GGACCGTGTGGACAGCTGGACACCATTCTACCAACAAGGGCACAACGCGACCTTCTTCGGTAAT
GTCAACGACTCGGCGGTGGTACGCCATGACCTGCACTACCATTTTACGGCTCGCTACATCCGCA
TCGTGCCACTGGCCTGGAACCCCCGCGGCAAGATTGGCTTGAGGCTGGGCATCTACGGTTGTCC
CTACACGTCCAACATCCTGTATTTTGACGGCGATGATGCCATTTCATACCGCTTCCAGCGAGGG
GCCAGTCAAAGTCTTTGGGACGTGTTCGCTTTTAGTTTCAAGACAGAGGAGAAGGACGGGCTGC
TGTTGCACACCGAAGGCTCCCAGGGGGATTATGTGACGCTTGAACTGCAAGGAGCACACCTGCT
GCTGCACATGAGCCTGGGCAGCAGCCCCATCCAGCCGAGACCTGGTCACACCACGGTGAGCGCT
GGTGGCGTACTTAATGACCTAAGCTGGCATTATGTGCGGGTGGACCGATACGGCCGAGAAGCAA
ATCTCACCCTGGATGGTTACGTACATCGCTTTGTGCTCAACGGCGACTTTGAAAGGCTGAATCT
CGAAAATGAGATATTCATCGGAGGTCTAGTGGGCGCAGCGCGTAAGAACCTGGCCTACCGCCAT
AACTTCCGTGGCTGTATAGAAAACGTGATCTACAACCGGATCAACATAGCTGAAATGGCAGTGC
AGCGCCATTCGCGGATCACCTTCGAGGGTAATGTGGCTTTCCGGTGCTTGGATCCCGTTCCACA
CCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCTGGCTTTCCACGTCGAGGCCGC
CTTGCTGTCTCCTTCCGCTTCCGCACCTGGGACCTCACAGGGCTGCTCCTTTTCTCCCGCTTGG
GGGATGGGCTGGGTCATGTGGAGCTGATGCTTAGTGAAGGGCAAGTCAATGTATCCATCGCGCA
GACTGGCCGCAAGAAGCTTCAGTTTGCTGCGGGGTACCGCCTGAATGATGGCTTCTGGCATGAG
GTGAACTTTGTGGCACAGGAAAACCATGCGGTCATCAGTATTGATGATGTGGAGGGGGCAGAGG
TCAGGGTATCATACCCACTGCTGATCCGCACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAA
ACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATGGCTGCATGGAGCTGCTC
AAGGTGGATGGTCAACTGGTCAACCTCACTCTGGTAGAGTTTCGGAAGCTTGGTTACTTTGCTG
AGGTCCTCTTTGACACATGTGGCATCACAGACAGATGCAGCCCTAATATGTGTGAGCATGATGG
GCGCTGCTACCAGTCTTGGGATGACTTCATCTGCTACTGCGAACTCACCGGCTACAAGGGAGTT
ACCTGCCATGAACCATTGTATAAGGAGTCCTGTGAAGCCTATCGCCTCAGCGGGAAATATTCTG
GAAATTACACCATTGATCCTGATGGCAGTGGACCCCTGAAACCATTTGTAGTGTATTGTGATAT
CCGAGAGAACCGAGCATGGACAGTTGTGCGACATGACAGGCTATGGACCACTCGAGTGACAGGT
TCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGGAATGCCTCCTGGGAGGAAGTCA
GTGCTCTGGCCAATGCTTCCCAGCACTGTGAGCAGTGGATCGAGTTCTCCTGCTACAATTCCCG
GCTGCTCAACACTGCAGGAGGCTACCCCTACAGCTTTTGGATTGGCCGAAATGAAGAACAGCAT
TTCTACTGGGGAGGCTCCCAGCCTGGGATCCAACGCTGTGCCTGTGGGCTGGACCAGAGCTGTA
TAGACCCTGCACTGCACTGCAACTGCGATGCTGACCAGCCACAGTGGAGAACAGACAAGGGGCT
CCTGACCTTTGTGGACCATCTGCCTGTCACTCAGGTAGTGATAGGTGACACAAACCGCTCCAGC
TCTGAAGCTCAGTTCTTCCTGAGGCCTCTGCGCTGTTATGGTGACCGCAATTCCTGGAACACTA
TCTCCTTCCGCACTGGAGCTGCACTGCGTTTCCCTCCAATCCGTGCCAACCACAGCCTTGATGT
CTCCTTCTACTTCAGGACCTCGGCTCCCTCAGGAGTCTTCCTAGAGAACATGGGGGGTCCTTTC
TGCCAGTGGCGCCGACCTTACGTGAGAGTGGAGCTCAACACATCCCGGGATGTGGTCTTTGCCT
TTGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCAGATGACTTCGAGTTCAATGATGA
CGAGTGGCATTTGGTCCGGGCTGAAATCAACGTGAAGCAGGCCCGGCTGCGAGTGGACCATCGG
CCCTGGGTGCTAAGGCCCATGCCCCTGCAGACGTACATCTGGCTGGAGTATGACCAACCCCTCT
ATGTGGGATCTGCAGAGCTTAAGAGGCGCCCATTTGTGGGGTGCTTGAGGGCCATGCGTTTGAA
TGGAGTGACTCTGAACTTGGAGGGTCGTGCCAATGCCTCCGAGGGCACCTTCCCCAACTGCACG
GGCCACTGCACCCACCCCCGGTTCCCCTGTTTCCACGGAGGACGCTGTGTGGAGCGATACAGCT
ACTACACGTGTGACTGTGACCTCACAGCTTTTGATGGACCATATTGTAATCACGATATTGGTGG
ATTCTTTGAGACTGGCACATGGATGCGCTATAACCTCCAGTCAGCACTGCGTTCTGCGGCCCAG
GAGTTCTCTCACATGCTGAGCCGGCCGGTACCGGGCTATGAGCCTGGCTATATCCCAGGCTACG
ACACTCCTGGTTACGTGCCTGGGTACCATGGTCCTGGGTACCGCCTACCCGACTACCCAAGGCC
TGGCCGGCCAGTGCCCGGATACCGGGGGCCCGTGTACAATGTTACTGGAGAGGAGGTCTCCTTT
AGCTTCAGCACCAGCTCTGCTCCTGCAGTCCTGCTCTACGTCAGCTCCTTTGTGCGTGACTACA
TGGCCGTGCTCATCAAGGAAGATGGGACCCTACAGCTTCGCTATCAGCTGGGCACCAGTCCCTA
TGTGTACCAGCTAACCACCCGGCCAGTGACCGATGGCCAACCCCATAGTGTCAACATCACCCGG
GTCTACCGAAACCTCTTTATCCAGGTGGACTACTTCCCGCTGACAGAACAGAAGTTCTCTCTCC
TGGTGGACAGCCAGCTGGACTCCCCCAAGGCCTTGTATCTAGGGCGTGTGATGGAGACAGGAGT
CATTGACCCAGAGATTCAGCGGTACAACACCCCAGGTTTCTCAGGCTGCCTGTCTGGTGTCCGG
TTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGCCCCATGACTGCTGAGCTGG
CGGAGGCCATGCGGGTTCAAGGAGAACTGTCGGAGTCTAACTGTGGCGCTATGCCACGCCTTGT
CTCCGAGGTGCCACCAGAGCTTGATCCCTGGTACCTGCCCCCAGATTTCCCATACTACCATGAC
GACGGATGGATTGCCATACTCTTAGGTTTTTTGGTGGCCTTCCTGCTGCTGGGGCTTGTGGGAA
TGCTGGTGCTGTTCTATCTGCAAAATCATCGATACAAGGGCTCCTATCACACCAACGAGCCCAA
GGCCACCCATGATTCCCACCCTGGCGGCAAAGCTCCCCTACCTCCCTCAGGCCCTGCCCAGGCC
CCTGCCCCCACTCCAGCTCCCACCCAGGTTCCGACCCCAGCCCCAGCCCCAGCCTCTGGCCCAG
GCCCCAGGGACCAGAACCTCCCCCAGATCTTGGAGGAGTCCAGGTCTGAATGAGTCACAAGGGC
TTCAGGGACCAAGGCCAACTCCTCTAAGTCCCTTCAGCTCCTGCCTCTCCTCTCCCCTGTCAGG
GACATTTGGCTCTTCTTAGCAGGCTCTGTTCACCAGGAGGATCCCCTCTTGCCAAGTTTGGTGT
GCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGTCTCACTGCCTAAACCAATGCCCTGCCC
CCACCCCCCACCCCAGCTCCTGGCTGTTTGCCTGCCCTACGGGAGAAAGCTCATGGAGCTGAGG
CGGGCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACAACCAAGGGCAGGGGAGA
TGAACTGCCTCCCTTCCTGTGGGTATTATCAGCAGGGACAGATGTGGGGGATCGAGGGGCTGCA
CAGGGCAGGCAGGGAGGGAGGGAGGAGGCTGCTAAAACACACCCTGGAGCCTCCCCCCTGCCCT
GCTGACCGGCTGTCTTCCATCTGCTTCCTCTCAGCTGGGGTTGAGGGAAGAACTTCATCCCCAC
CCCCCACCTCACCCAACCCTTTTTGTTCTTACAGAGACCAAGAGGCCTCAGCTTAGCACTTTAG
TACCTCCACTGCTTCACATGCTTTAGCCAAAGCCATAAAAAGCCTGCAAGTAGAAGAAATAATG
CAGACCCTGCCCAGCCAGTCCTCTGCTCCTCCACCCCTTTCCAAAATACGCAATAGCCTGGGTG
CCTGTGTGCAGGCCTGGCCCCCTCCGTGCATGAGGAGCCCCCCTCCCCCGCTCAGAGATGCTGC
GTGTTCGTCCAGGAGGTCATATTCTTTATATATATTTTTTGTTGCAAAGCCTCTCTCTAGAGAA
CTATATATTACTCTAATTTTTTAATTATCTGTTTATATATAAAAGAACTCAGTGGGCCGTCCTG
TGCTGTGCCCAGTTTGTAGTGAGCTCCTTCTGTGTTGGATGTCTCATGAGTCCTGCCAGCCACT
CACCCGCCTGCCGGGCCTCCATTCTAGAGCAGGGCAGAGCCCGCTGTGCCCTCACCTGAGCAGG
TTCAATAAAAGCAGAGTGGCAGA

hide sequence

RefSeq Acc Id:

XM_008768123 ⟹ XP_008766345

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,610,422 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,110,141 - 86,125,612 (+)	NCBI
Rnor_6.0	10	89,088,186 - 89,103,609 (+)	NCBI

Sequence:

show sequence

AGCTCCGGCAGCGGCCCAGCTGAATAAGCCTCCTCCTCATACCCGGAGTAAGGTCCCCAGGAGA
CCTGATGGCATCAAAATGAGAAGAGGGACCGTATGGCTGCAATGAGGAGCTGGTGGGGCCTCTG
TATGCACGGTCTCTGGGTGCTTCCTCCTACTATGGACTCTTTACCACAGCCCGCTTTGCCCGGC
TACACGGCATCAGTGGATGGTCGCCCCGGATTGGGGACCCGAATCCCTGGCTCCAGATAGACTT
AATGAAGAAGCATCGAATCCGGGCTGTGGCCACACAGGGAGCCTTTAATTCTTGGGATTGGGTC
ACACGTTACATGCTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTCTACCAACAAGGGC
ACAACGCGACCTTCTTCGGTAATGTCAACGACTCGGCGGTGGTACGCCATGACCTGCACTACCA
TTTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCCCGCGGCAAGATTGGCTTG
AGGCTGGGCATCTACGGTTGTCCCTACACGTCCAACATCCTGTATTTTGACGGCGATGATGCCA
TTTCATACCGCTTCCAGCGAGGGGCCAGTCAAAGTCTTTGGGACGTGTTCGCTTTTAGTTTCAA
GACAGAGGAGAAGGACGGGCTGCTGTTGCACACCGAAGGCTCCCAGGGGGATTATGTGACGCTT
GAACTGCAAGGAGCACACCTGCTGCTGCACATGAGCCTGGGCAGCAGCCCCATCCAGCCGAGAC
CTGGTCACACCACGGTGAGCGCTGGTGGCGTACTTAATGACCTAAGCTGGCATTATGTGCGGGT
GGACCGATACGGCCGAGAAGCAAATCTCACCCTGGATGGTTACGTACATCGCTTTGTGCTCAAC
GGCGACTTTGAAAGGCTGAATCTCGAAAATGAGATATTCATCGGAGGTCTAGTGGGCGCAGCGC
GTAAGAACCTGGCCTACCGCCATAACTTCCGTGGCTGTATAGAAAACGTGATCTACAACCGGAT
CAACATAGCTGAAATGGCAGTGCAGCGCCATTCGCGGATCACCTTCGAGGGTAATGTGGCTTTC
CGGTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGC
CTGGCTTTCCACGTCGAGGCCGCCTTGCTGTCTCCTTCCGCTTCCGCACCTGGGACCTCACAGG
GCTGCTCCTTTTCTCCCGCTTGGGGGATGGGCTGGGTCATGTGGAGCTGATGCTTAGTGAAGGG
CAAGTCAATGTATCCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTTGCTGCGGGGTACCGCC
TGAATGATGGCTTCTGGCATGAGGTGAACTTTGTGGCACAGGAAAACCATGCGGTCATCAGTAT
TGATGATGTGGAGGGGGCAGAGGTCAGGGTATCATACCCACTGCTGATCCGCACAGGGACTTCA
TACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCAT
TCCATGGCTGCATGGAGCTGCTCAAGGTGGATGGTCAACTGGTCAACCTCACTCTGGTAGAGTT
TCGGAAGCTTGGTTACTTTGCTGAGGTCCTCTTTGACACATGTGGCATCACAGACAGATGCAGC
CCTAATATGTGTGAGCATGATGGGCGCTGCTACCAGTCTTGGGATGACTTCATCTGCTACTGCG
AACTCACCGGCTACAAGGGAGTTACCTGCCATGAACCATTGTATAAGGAGTCCTGTGAAGCCTA
TCGCCTCAGCGGGAAATATTCTGGAAATTACACCATTGATCCTGATGGCAGTGGACCCCTGAAA
CCATTTGTAGTGTATTGTGATATCCGAGAGAACCGAGCATGGACAGTTGTGCGACATGACAGGC
TATGGACCACTCGAGTGACAGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTG
GAATGCCTCCTGGGAGGAAGTCAGTGCTCTGGCCAATGCTTCCCAGCACTGTGAGCAGTGGATC
GAGTTCTCCTGCTACAATTCCCGGCTGCTCAACACTGCAGGAGGCTACCCCTACAGCTTTTGGA
TTGGCCGAAATGAAGAACAGCATTTCTACTGGGGAGGCTCCCAGCCTGGGATCCAACGCTGTGC
CTGTGGGCTGGACCAGAGCTGTATAGACCCTGCACTGCACTGCAACTGCGATGCTGACCAGCCA
CAGTGGAGAACAGACAAGGGGCTCCTGACCTTTGTGGACCATCTGCCTGTCACTCAGGTAGTGA
TAGGTGACACAAACCGCTCCAGCTCTGAAGCTCAGTTCTTCCTGAGGCCTCTGCGCTGTTATGG
TGACCGCAATTCCTGGAACACTATCTCCTTCCGCACTGGAGCTGCACTGCGTTTCCCTCCAATC
CGTGCCAACCACAGCCTTGATGTCTCCTTCTACTTCAGGACCTCGGCTCCCTCAGGAGTCTTCC
TAGAGAACATGGGGGGTCCTTTCTGCCAGTGGCGCCGACCTTACGTGAGAGTGGAGCTCAACAC
ATCCCGGGATGTGGTCTTTGCCTTTGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCA
GATGACTTCGAGTTCAATGATGACGAGTGGCATTTGGTCCGGGCTGAAATCAACGTGAAGCAGG
CCCGGCTGCGAGTGGACCATCGGCCCTGGGTGCTAAGGCCCATGCCCCTGCAGACGTACATCTG
GCTGGAGTATGACCAACCCCTCTATGTGGGATCTGCAGAGCTTAAGAGGCGCCCATTTGTGGGG
TGCTTGAGGGCCATGCGTTTGAATGGAGTGACTCTGAACTTGGAGGGTCGTGCCAATGCCTCCG
AGGGCACCTTCCCCAACTGCACGGGCCACTGCACCCACCCCCGGTTCCCCTGTTTCCACGGAGG
ACGCTGTGTGGAGCGATACAGCTACTACACGTGTGACTGTGACCTCACAGCTTTTGATGGACCA
TATTGTAATCACGATATTGGTGGATTCTTTGAGACTGGCACATGGATGCGCTATAACCTCCAGT
CAGCACTGCGTTCTGCGGCCCAGGAGTTCTCTCACATGCTGAGCCGGCCGGTACCGGGCTATGA
GCCTGGCTATATCCCAGGCTACGACACTCCTGGTTACGTGCCTGGGTACCATGGTCCTGGGTAC
CGCCTACCCGACTACCCAAGGCCTGGCCGGCCAGTGCCCGGATACCGGGGGCCCGTGTACAATG
TTACTGGAGAGGAGGTCTCCTTTAGCTTCAGCACCAGCTCTGCTCCTGCAGTCCTGCTCTACGT
CAGCTCCTTTGTGCGTGACTACATGGCCGTGCTCATCAAGGAAGATGGGACCCTACAGCTTCGC
TATCAGCTGGGCACCAGTCCCTATGTGTACCAGCTAACCACCCGGCCAGTGACCGATGGCCAAC
CCCATAGTGTCAACATCACCCGGGTCTACCGAAACCTCTTTATCCAGGTGGACTACTTCCCGCT
GACAGAACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCCCCCAAGGCCTTGTATCTA
GGGCGTGTGATGGAGACAGGAGTCATTGACCCAGAGATTCAGCGGTACAACACCCCAGGTTTCT
CAGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCC
TCGCCCCATGACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCGGAGTCTAAC
TGTGGCGCTATGCCACGCCTTGTCTCCGAGGTGCCACCAGAGCTTGATCCCTGGTACCTGCCCC
CAGATTTCCCATACTACCATGACGACGGATGGATTGCCATACTCTTAGGTTTTTTGGTGGCCTT
CCTGCTGCTGGGGCTTGTGGGAATGCTGGTGCTGTTCTATCTGCAAAATCATCGATACAAGGGC
TCCTATCACACCAACGAGCCCAAGGCCACCCATGATTCCCACCCTGGCGGCAAAGCTCCCCTAC
CTCCCTCAGGCCCTGCCCAGGCCCCTGCCCCCACTCCAGCTCCCACCCAGGTTCCGACCCCAGC
CCCAGCCCCAGCCTCTGGCCCAGGCCCCAGGGACCAGAACCTCCCCCAGATCTTGGAGGAGTCC
AGGTCTGAATGAGTCACAAGGGCTTCAGGGACCAAGGCCAACTCCTCTAAGTCCCTTCAGCTCC
TGCCTCTCCTCTCCCCTGTCAGGGACATTTGGCTCTTCTTAGCAGGCTCTGTTCACCAGGAGGA
TCCCCTCTTGCCAAGTTTGGTGTGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGTCTCA
CTGCCTAAACCAATGCCCTGCCCCCACCCCCCACCCCAGCTCCTGGCTGTTTGCCTGCCCTACG
GGAGAAAGCTCATGGAGCTGAGGCGGGCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGA
TTAACAACCAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGGGTATTATCAGCAGGGACAG
ATGTGGGGGATCGAGGGGCTGCACAGGGCAGGCAGGGAGGGAGGGAGGAGGCTGCTAAAACACA
CCCTGGAGCCTCCCCCCTGCCCTGCTGACCGGCTGTCTTCCATCTGCTTCCTCTCAGCTGGGGT
TGAGGGAAGAACTTCATCCCCACCCCCCACCTCACCCAACCCTTTTTGTTCTTACAGAGACCAA
GAGGCCTCAGCTTAGCACTTTAGTACCTCCACTGCTTCACATGCTTTAGCCAAAGCCATAAAAA
GCCTGCAAGTAGAAGAAATAATGCAGACCCTGCCCAGCCAGTCCTCTGCTCCTCCACCCCTTTC
CAAAATACGCAATAGCCTGGGTGCCTGTGTGCAGGCCTGGCCCCCTCCGTGCATGAGGAGCCCC
CCTCCCCCGCTCAGAGATGCTGCGTGTTCGTCCAGGAGGTCATATTCTTTATATATATTTTTTG
TTGCAAAGCCTCTCTCTAGAGAACTATATATTACTCTAATTTTTTAATTATCTGTTTATATATA
AAAGAACTCAGTGGGCCGTCCTGTGCTGTGCCCAGTTTGTAGTGAGCTCCTTCTGTGTTGGATG
TCTCATGAGTCCTGCCAGCCACTCACCCGCCTGCCGGGCCTCCATTCTAGAGCAGGGCAGAGCC
CGCTGTGCCCTCACCTGAGCAGGTTCAATAAAAGCAGAGTGGCAGA

hide sequence

RefSeq Acc Id:

XM_008768124 ⟹ XP_008766346

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,610,140 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,109,850 - 86,125,612 (+)	NCBI
Rnor_6.0	10	89,087,904 - 89,103,609 (+)	NCBI

Sequence:

show sequence

AAGGAGGCCGAGTAGAGGCCTGAGATGGCACGGCAGGTGGTACTTCCTAAATTCCAGCCCTGAA
GAGCCCCTGCTGCAGCAAAAGGCAAGATGGCTGCAATGAGGAGCTGGTGGGGCCTCTGTATGCA
CGGTCTCTGGGTGCTTCCTCCTACTATGGACTCTTTACCACAGCCCGCTTTGCCCGGCTACACG
GCATCAGTGGATGGTCGCCCCGGATTGGGGACCCGAATCCCTGGCTCCAGATAGACTTAATGAA
GAAGCATCGAATCCGGGCTGTGGCCACACAGGGAGCCTTTAATTCTTGGGATTGGGTCACACGT
TACATGCTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTCTACCAACAAGGGCACAACG
CGACCTTCTTCGGTAATGTCAACGACTCGGCGGTGGTACGCCATGACCTGCACTACCATTTTAC
GGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCCCGCGGCAAGATTGGCTTGAGGCTG
GGCATCTACGGTTGTCCCTACACGTCCAACATCCTGTATTTTGACGGCGATGATGCCATTTCAT
ACCGCTTCCAGCGAGGGGCCAGTCAAAGTCTTTGGGACGTGTTCGCTTTTAGTTTCAAGACAGA
GGAGAAGGACGGGCTGCTGTTGCACACCGAAGGCTCCCAGGGGGATTATGTGACGCTTGAACTG
CAAGGAGCACACCTGCTGCTGCACATGAGCCTGGGCAGCAGCCCCATCCAGCCGAGACCTGGTC
ACACCACGGTGAGCGCTGGTGGCGTACTTAATGACCTAAGCTGGCATTATGTGCGGGTGGACCG
ATACGGCCGAGAAGCAAATCTCACCCTGGATGGTTACGTACATCGCTTTGTGCTCAACGGCGAC
TTTGAAAGGCTGAATCTCGAAAATGAGATATTCATCGGAGGTCTAGTGGGCGCAGCGCGTAAGA
ACCTGGCCTACCGCCATAACTTCCGTGGCTGTATAGAAAACGTGATCTACAACCGGATCAACAT
AGCTGAAATGGCAGTGCAGCGCCATTCGCGGATCACCTTCGAGGGTAATGTGGCTTTCCGGTGC
TTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAACTTCGTCCAAGTGCCTGGCT
TTCCACGTCGAGGCCGCCTTGCTGTCTCCTTCCGCTTCCGCACCTGGGACCTCACAGGGCTGCT
CCTTTTCTCCCGCTTGGGGGATGGGCTGGGTCATGTGGAGCTGATGCTTAGTGAAGGGCAAGTC
AATGTATCCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTTGCTGCGGGGTACCGCCTGAATG
ATGGCTTCTGGCATGAGGTGAACTTTGTGGCACAGGAAAACCATGCGGTCATCAGTATTGATGA
TGTGGAGGGGGCAGAGGTCAGGGTATCATACCCACTGCTGATCCGCACAGGGACTTCATACTTC
TTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCCAACCAGACAGCATTCCATG
GCTGCATGGAGCTGCTCAAGGTGGATGGTCAACTGGTCAACCTCACTCTGGTAGAGTTTCGGAA
GCTTGGTTACTTTGCTGAGGTCCTCTTTGACACATGTGGCATCACAGACAGATGCAGCCCTAAT
ATGTGTGAGCATGATGGGCGCTGCTACCAGTCTTGGGATGACTTCATCTGCTACTGCGAACTCA
CCGGCTACAAGGGAGTTACCTGCCATGAACCATTGTATAAGGAGTCCTGTGAAGCCTATCGCCT
CAGCGGGAAATATTCTGGAAATTACACCATTGATCCTGATGGCAGTGGACCCCTGAAACCATTT
GTAGTGTATTGTGATATCCGAGAGAACCGAGCATGGACAGTTGTGCGACATGACAGGCTATGGA
CCACTCGAGTGACAGGTTCCAGCATGGACCGGCCCTTTCTGGGGGCCATCCAATACTGGAATGC
CTCCTGGGAGGAAGTCAGTGCTCTGGCCAATGCTTCCCAGCACTGTGAGCAGTGGATCGAGTTC
TCCTGCTACAATTCCCGGCTGCTCAACACTGCAGGAGGCTACCCCTACAGCTTTTGGATTGGCC
GAAATGAAGAACAGCATTTCTACTGGGGAGGCTCCCAGCCTGGGATCCAACGCTGTGCCTGTGG
GCTGGACCAGAGCTGTATAGACCCTGCACTGCACTGCAACTGCGATGCTGACCAGCCACAGTGG
AGAACAGACAAGGGGCTCCTGACCTTTGTGGACCATCTGCCTGTCACTCAGGTAGTGATAGGTG
ACACAAACCGCTCCAGCTCTGAAGCTCAGTTCTTCCTGAGGCCTCTGCGCTGTTATGGTGACCG
CAATTCCTGGAACACTATCTCCTTCCGCACTGGAGCTGCACTGCGTTTCCCTCCAATCCGTGCC
AACCACAGCCTTGATGTCTCCTTCTACTTCAGGACCTCGGCTCCCTCAGGAGTCTTCCTAGAGA
ACATGGGGGGTCCTTTCTGCCAGTGGCGCCGACCTTACGTGAGAGTGGAGCTCAACACATCCCG
GGATGTGGTCTTTGCCTTTGATATTGGCAATGGGGATGAGAACCTGACAGTGCACTCAGATGAC
TTCGAGTTCAATGATGACGAGTGGCATTTGGTCCGGGCTGAAATCAACGTGAAGCAGGCCCGGC
TGCGAGTGGACCATCGGCCCTGGGTGCTAAGGCCCATGCCCCTGCAGACGTACATCTGGCTGGA
GTATGACCAACCCCTCTATGTGGGATCTGCAGAGCTTAAGAGGCGCCCATTTGTGGGGTGCTTG
AGGGCCATGCGTTTGAATGGAGTGACTCTGAACTTGGAGGGTCGTGCCAATGCCTCCGAGGGCA
CCTTCCCCAACTGCACGGGCCACTGCACCCACCCCCGGTTCCCCTGTTTCCACGGAGGACGCTG
TGTGGAGCGATACAGCTACTACACGTGTGACTGTGACCTCACAGCTTTTGATGGACCATATTGT
AATCACGATATTGGTGGATTCTTTGAGACTGGCACATGGATGCGCTATAACCTCCAGTCAGCAC
TGCGTTCTGCGGCCCAGGAGTTCTCTCACATGCTGAGCCGGCCGGTACCGGGCTATGAGCCTGG
CTATATCCCAGGCTACGACACTCCTGGTTACGTGCCTGGGTACCATGGTCCTGGGTACCGCCTA
CCCGACTACCCAAGGCCTGGCCGGCCAGTGCCCGGATACCGGGGGCCCGTGTACAATGTTACTG
GAGAGGAGGTCTCCTTTAGCTTCAGCACCAGCTCTGCTCCTGCAGTCCTGCTCTACGTCAGCTC
CTTTGTGCGTGACTACATGGCCGTGCTCATCAAGGAAGATGGGACCCTACAGCTTCGCTATCAG
CTGGGCACCAGTCCCTATGTGTACCAGCTAACCACCCGGCCAGTGACCGATGGCCAACCCCATA
GTGTCAACATCACCCGGGTCTACCGAAACCTCTTTATCCAGGTGGACTACTTCCCGCTGACAGA
ACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCCCCCAAGGCCTTGTATCTAGGGCGT
GTGATGGAGACAGGAGTCATTGACCCAGAGATTCAGCGGTACAACACCCCAGGTTTCTCAGGCT
GCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCCATTTCCGAACCCCTCGCCC
CATGACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACTGTCGGAGTCTAACTGTGGC
GCTATGCCACGCCTTGTCTCCGAGGTGCCACCAGAGCTTGATCCCTGGTACCTGCCCCCAGATT
TCCCATACTACCATGACGACGGATGGATTGCCATACTCTTAGGTTTTTTGGTGGCCTTCCTGCT
GCTGGGGCTTGTGGGAATGCTGGTGCTGTTCTATCTGCAAAATCATCGATACAAGGGCTCCTAT
CACACCAACGAGCCCAAGGCCACCCATGATTCCCACCCTGGCGGCAAAGCTCCCCTACCTCCCT
CAGGCCCTGCCCAGGCCCCTGCCCCCACTCCAGCTCCCACCCAGGTTCCGACCCCAGCCCCAGC
CCCAGCCTCTGGCCCAGGCCCCAGGGACCAGAACCTCCCCCAGATCTTGGAGGAGTCCAGGTCT
GAATGAGTCACAAGGGCTTCAGGGACCAAGGCCAACTCCTCTAAGTCCCTTCAGCTCCTGCCTC
TCCTCTCCCCTGTCAGGGACATTTGGCTCTTCTTAGCAGGCTCTGTTCACCAGGAGGATCCCCT
CTTGCCAAGTTTGGTGTGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGTCTCACTGCCT
AAACCAATGCCCTGCCCCCACCCCCCACCCCAGCTCCTGGCTGTTTGCCTGCCCTACGGGAGAA
AGCTCATGGAGCTGAGGCGGGCCTTTCCTGCCATCTCTGTCCCAGCTGCTGGCAAGGATTAACA
ACCAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGGGTATTATCAGCAGGGACAGATGTGG
GGGATCGAGGGGCTGCACAGGGCAGGCAGGGAGGGAGGGAGGAGGCTGCTAAAACACACCCTGG
AGCCTCCCCCCTGCCCTGCTGACCGGCTGTCTTCCATCTGCTTCCTCTCAGCTGGGGTTGAGGG
AAGAACTTCATCCCCACCCCCCACCTCACCCAACCCTTTTTGTTCTTACAGAGACCAAGAGGCC
TCAGCTTAGCACTTTAGTACCTCCACTGCTTCACATGCTTTAGCCAAAGCCATAAAAAGCCTGC
AAGTAGAAGAAATAATGCAGACCCTGCCCAGCCAGTCCTCTGCTCCTCCACCCCTTTCCAAAAT
ACGCAATAGCCTGGGTGCCTGTGTGCAGGCCTGGCCCCCTCCGTGCATGAGGAGCCCCCCTCCC
CCGCTCAGAGATGCTGCGTGTTCGTCCAGGAGGTCATATTCTTTATATATATTTTTTGTTGCAA
AGCCTCTCTCTAGAGAACTATATATTACTCTAATTTTTTAATTATCTGTTTATATATAAAAGAA
CTCAGTGGGCCGTCCTGTGCTGTGCCCAGTTTGTAGTGAGCTCCTTCTGTGTTGGATGTCTCAT
GAGTCCTGCCAGCCACTCACCCGCCTGCCGGGCCTCCATTCTAGAGCAGGGCAGAGCCCGCTGT
GCCCTCACCTGAGCAGGTTCAATAAAAGCAGAGTGGCAGA

hide sequence

RefSeq Acc Id:

XM_017597555 ⟹ XP_017453044

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,612,409 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,112,126 - 86,125,612 (+)	NCBI
Rnor_6.0	10	89,089,911 - 89,103,609 (+)	NCBI

Sequence:

show sequence

TCTGGAGTTTACTGGGCGAGTTCTGCACCGCATTGCGGCTGGGTGGTCGCCGGTCCTTCCCGCA
CGCGCCGGCTCGCTCCCATCTTTCCCTGCCTCTCCCCAGCGCTCCGCAATGCAGCTCTGAGGCT
GCTGCGCGCGCGCCGCCGCCGTCTGGGGCTGGTCTCTGATCTGAGGAACCAGTCAACCCAGGGG
ATTTGGAGCTGTTAATCCAAGCGGGAGCTGGTGCCTAGGTTTGAGATGGCTGCAATGAGGAGCT
GGTGGGGCCTCTGTATGCACGGTCTCTGGGTGCTTCCTCCTACTATGGACTCTTTACCACAGCC
CGCTTTGCCCGGCTACACGGCATCAGTGGATGGTCGCCCCGGATTGGGGACCCGAATCCCTGGC
TCCAGATAGACTTAATGAAGAAGCATCGAATCCGGGCTGTGGCCACACAGGGAGCCTTTAATTC
TTGGGATTGGGTCACACGTTACATGCTGCTCTACGGGGACCGTGTGGACAGCTGGACACCATTC
TACCAACAAGGGCACAACGCGACCTTCTTCGGTAATGTCAACGACTCGGCGGTGGTACGCCATG
ACCTGCACTACCATTTTACGGCTCGCTACATCCGCATCGTGCCACTGGCCTGGAACCCCCGCGG
CAAGATTGGCTTGAGGCTGGGCATCTACGGTTGTCCCTACACGTCCAACATCCTGTATTTTGAC
GGCGATGATGCCATTTCATACCGCTTCCAGCGAGGGGCCAGTCAAAGTCTTTGGGACGTGTTCG
CTTTTAGTTTCAAGACAGAGGAGAAGGACGGGCTGCTGTTGCACACCGAAGGCTCCCAGGGGGA
TTATGTGACGCTTGAACTGCAAGGAGCACACCTGCTGCTGCACATGAGCCTGGGCAGCAGCCCC
ATCCAGCCGAGACCTGGTCACACCACGGTGAGCGCTGGTGGCGTACTTAATGACCTAAGCTGGC
ATTATGTGCGGGTGGACCGATACGGCCGAGAAGCAAATCTCACCCTGGATGGTTACGTACATCG
CTTTGTGCTCAACGGCGACTTTGAAAGGCTGAATCTCGAAAATGAGATATTCATCGGAGGTCTA
GTGGGCGCAGCGCGTAAGAACCTGGCCTACCGCCATAACTTCCGTGGCTGTATAGAAAACGTGA
TCTACAACCGGATCAACATAGCTGAAATGGCAGTGCAGCGCCATTCGCGGATCACCTTCGAGGG
TAATGTGGCTTTCCGGTGCTTGGATCCCGTTCCACACCCCATCAACTTCGGAGGCCCTCACAAC
TTCGTCCAAGTGCCTGGCTTTCCACGTCGAGGCCGCCTTGCTGTCTCCTTCCGCTTCCGCACCT
GGGACCTCACAGGGCTGCTCCTTTTCTCCCGCTTGGGGGATGGGCTGGGTCATGTGGAGCTGAT
GCTTAGTGAAGGGCAAGTCAATGTATCCATCGCGCAGACTGGCCGCAAGAAGCTTCAGTTTGCT
GCGGGGTACCGCCTGAATGATGGCTTCTGGCATGAGGTGAACTTTGTGGCACAGGAAAACCATG
CGGTCATCAGTATTGATGATGTGGAGGGGGCAGAGGTCAGGGTATCATACCCACTGCTGATCCG
CACAGGGACTTCATACTTCTTTGGTGGTTGTCCCAAACCAGCCAGTCGATGGGGCTGCCACTCC
AACCAGACAGCATTCCATGGCTGCATGGAGCTGCTCAAGGTGGATGGTCAACTGGTCAACCTCA
CTCTGGTAGAGTTTCGGAAGCTTGGTTACTTTGCTGAGGTCCTCTTTGACACATGTGGCATCAC
AGACAGATGCAGCCCTAATATGTGTGAGCATGATGGGCGCTGCTACCAGTCTTGGGATGACTTC
ATCTGCTACTGCGAACTCACCGGCTACAAGGGAGTTACCTGCCATGAACCATTGTATAAGGAGT
CCTGTGAAGCCTATCGCCTCAGCGGGAAATATTCTGGAAATTACACCATTGATCCTGATGGCAG
TGGACCCCTGAAACCATTTGTAGTGTATTGTGATATCCGAGAGAACCGAGCATGGACAGTTGTG
CGACATGACAGGCTATGGACCACTCGAGTGACAGGTTCCAGCATGGACCGGCCCTTTCTGGGGG
CCATCCAATACTGGAATGCCTCCTGGGAGGAAGTCAGTGCTCTGGCCAATGCTTCCCAGCACTG
TGAGCAGTGGATCGAGTTCTCCTGCTACAATTCCCGGCTGCTCAACACTGCAGGAGGCTACCCC
TACAGCTTTTGGATTGGCCGAAATGAAGAACAGCATTTCTACTGGGGAGGCTCCCAGCCTGGGA
TCCAACGCTGTGCCTGTGGGCTGGACCAGAGCTGTATAGACCCTGCACTGCACTGCAACTGCGA
TGCTGACCAGCCACAGTGGAGAACAGACAAGGGGCTCCTGACCTTTGTGGACCATCTGCCTGTC
ACTCAGGTAGTGATAGGTGACACAAACCGCTCCAGCTCTGAAGCTCAGTTCTTCCTGAGGCCTC
TGCGCTGTTATGGTGACCGCAATTCCTGGAACACTATCTCCTTCCGCACTGGAGCTGCACTGCG
TTTCCCTCCAATCCGTGCCAACCACAGCCTTGATGTCTCCTTCTACTTCAGGACCTCGGCTCCC
TCAGGAGTCTTCCTAGAGAACATGGGGGGTCCTTTCTGCCAGTGGCGCCGACCTTACGTGAGAG
TGGAGCTCAACACATCCCGGGATGTGGTCTTTGCCTTTGATATTGGCAATGGGGATGAGAACCT
GACAGTGCACTCAGATGACTTCGAGTTCAATGATGACGAGTGGCATTTGGTCCGGGCTGAAATC
AACGTGAAGCAGGCCCGGCTGCGAGTGGACCATCGGCCCTGGGTGCTAAGGCCCATGCCCCTGC
AGACGTACATCTGGCTGGAGTATGACCAACCCCTCTATGTGGGATCTGCAGAGCTTAAGAGGCG
CCCATTTGTGGGGTGCTTGAGGGCCATGCGTTTGAATGGAGTGACTCTGAACTTGGAGGGTCGT
GCCAATGCCTCCGAGGGCACCTTCCCCAACTGCACGGGCCACTGCACCCACCCCCGGTTCCCCT
GTTTCCACGGAGGACGCTGTGTGGAGCGATACAGCTACTACACGTGTGACTGTGACCTCACAGC
TTTTGATGGACCATATTGTAATCACGATATTGGTGGATTCTTTGAGACTGGCACATGGATGCGC
TATAACCTCCAGTCAGCACTGCGTTCTGCGGCCCAGGAGTTCTCTCACATGCTGAGCCGGCCGG
TACCGGGCTATGAGCCTGGCTATATCCCAGGCTACGACACTCCTGGTTACGTGCCTGGGTACCA
TGGTCCTGGGTACCGCCTACCCGACTACCCAAGGCCTGGCCGGCCAGTGCCCGGATACCGGGGG
CCCGTGTACAATGTTACTGGAGAGGAGGTCTCCTTTAGCTTCAGCACCAGCTCTGCTCCTGCAG
TCCTGCTCTACGTCAGCTCCTTTGTGCGTGACTACATGGCCGTGCTCATCAAGGAAGATGGGAC
CCTACAGCTTCGCTATCAGCTGGGCACCAGTCCCTATGTGTACCAGCTAACCACCCGGCCAGTG
ACCGATGGCCAACCCCATAGTGTCAACATCACCCGGGTCTACCGAAACCTCTTTATCCAGGTGG
ACTACTTCCCGCTGACAGAACAGAAGTTCTCTCTCCTGGTGGACAGCCAGCTGGACTCCCCCAA
GGCCTTGTATCTAGGGCGTGTGATGGAGACAGGAGTCATTGACCCAGAGATTCAGCGGTACAAC
ACCCCAGGTTTCTCAGGCTGCCTGTCTGGTGTCCGGTTCAACAATGTGGCTCCTCTCAAGACCC
ATTTCCGAACCCCTCGCCCCATGACTGCTGAGCTGGCGGAGGCCATGCGGGTTCAAGGAGAACT
GTCGGAGTCTAACTGTGGCGCTATGCCACGCCTTGTCTCCGAGGTGCCACCAGAGCTTGATCCC
TGGTACCTGCCCCCAGATTTCCCATACTACCATGACGACGGATGGATTGCCATACTCTTAGGTT
TTTTGGTGGCCTTCCTGCTGCTGGGGCTTGTGGGAATGCTGGTGCTGTTCTATCTGCAAAATCA
TCGATACAAGGGCTCCTATCACACCAACGAGCCCAAGGCCACCCATGATTCCCACCCTGGCGGC
AAAGCTCCCCTACCTCCCTCAGGCCCTGCCCAGGCCCCTGCCCCCACTCCAGCTCCCACCCAGG
TTCCGACCCCAGCCCCAGCCCCAGCCTCTGGCCCAGGCCCCAGGGACCAGAACCTCCCCCAGAT
CTTGGAGGAGTCCAGGTCTGAATGAGTCACAAGGGCTTCAGGGACCAAGGCCAACTCCTCTAAG
TCCCTTCAGCTCCTGCCTCTCCTCTCCCCTGTCAGGGACATTTGGCTCTTCTTAGCAGGCTCTG
TTCACCAGGAGGATCCCCTCTTGCCAAGTTTGGTGTGCAGAGCTACAGATGGGACCAAAGGGAG
TGGCCGAGTCTCACTGCCTAAACCAATGCCCTGCCCCCACCCCCCACCCCAGCTCCTGGCTGTT
TGCCTGCCCTACGGGAGAAAGCTCATGGAGCTGAGGCGGGCCTTTCCTGCCATCTCTGTCCCAG
CTGCTGGCAAGGATTAACAACCAAGGGCAGGGGAGATGAACTGCCTCCCTTCCTGTGGGTATTA
TCAGCAGGGACAGATGTGGGGGATCGAGGGGCTGCACAGGGCAGGCAGGGAGGGAGGGAGGAGG
CTGCTAAAACACACCCTGGAGCCTCCCCCCTGCCCTGCTGACCGGCTGTCTTCCATCTGCTTCC
TCTCAGCTGGGGTTGAGGGAAGAACTTCATCCCCACCCCCCACCTCACCCAACCCTTTTTGTTC
TTACAGAGACCAAGAGGCCTCAGCTTAGCACTTTAGTACCTCCACTGCTTCACATGCTTTAGCC
AAAGCCATAAAAAGCCTGCAAGTAGAAGAAATAATGCAGACCCTGCCCAGCCAGTCCTCTGCTC
CTCCACCCCTTTCCAAAATACGCAATAGCCTGGGTGCCTGTGTGCAGGCCTGGCCCCCTCCGTG
CATGAGGAGCCCCCCTCCCCCGCTCAGAGATGCTGCGTGTTCGTCCAGGAGGTCATATTCTTTA
TATATATTTTTTGTTGCAAAGCCTCTCTCTAGAGAACTATATATTACTCTAATTTTTTAATTAT
CTGTTTATATATAAAAGAACTCAGTGGGCCGTCCTGTGCTGTGCCCAGTTTGTAGTGAGCTCCT
TCTGTGTTGGATGTCTCATGAGTCCTGCCAGCCACTCACCCGCCTGCCGGGCCTCCATTCTAGA
GCAGGGCAGAGCCCGCTGTGCCCTCACCTGAGCAGGTTCAATAAAAGCAGAGTGGCAGA

hide sequence

RefSeq Acc Id:

XM_039086960 ⟹ XP_038942888

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,611,928 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,111,618 - 86,125,612 (+)	NCBI

RefSeq Acc Id:

XM_039086961 ⟹ XP_038942889

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,612,304 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,112,012 - 86,125,612 (+)	NCBI

RefSeq Acc Id:

XM_039086962 ⟹ XP_038942890

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,610,422 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,110,141 - 86,125,612 (+)	NCBI

RefSeq Acc Id:

XM_039086963 ⟹ XP_038942891

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,610,140 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,109,850 - 86,125,612 (+)	NCBI

RefSeq Acc Id:

XM_039086964 ⟹ XP_038942892

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,610,422 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,110,141 - 86,125,612 (+)	NCBI

RefSeq Acc Id:

XM_039086965 ⟹ XP_038942893

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	86,612,304 - 86,625,890 (+)	NCBI
mRatBN7.2	10	86,112,011 - 86,125,612 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_114450	(Get FASTA)	NCBI Sequence Viewer
	XP_006247493	(Get FASTA)	NCBI Sequence Viewer
	XP_008766344	(Get FASTA)	NCBI Sequence Viewer
	XP_008766345	(Get FASTA)	NCBI Sequence Viewer
	XP_008766346	(Get FASTA)	NCBI Sequence Viewer
	XP_017453044	(Get FASTA)	NCBI Sequence Viewer
	XP_038942888	(Get FASTA)	NCBI Sequence Viewer
	XP_038942889	(Get FASTA)	NCBI Sequence Viewer
	XP_038942890	(Get FASTA)	NCBI Sequence Viewer
	XP_038942891	(Get FASTA)	NCBI Sequence Viewer
	XP_038942892	(Get FASTA)	NCBI Sequence Viewer
	XP_038942893	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB48482	(Get FASTA)	NCBI Sequence Viewer
	AAC53342	(Get FASTA)	NCBI Sequence Viewer
	EDM06098	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027505
	ENSRNOP00000027505.6
	ENSRNOP00000100542
	ENSRNOP00000107259
GenBank Protein	P97846	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_114450 ⟸ NM_032061
- Peptide Label:	precursor
- UniProtKB:	P97846 (UniProtKB/Swiss-Prot), A6HJ93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMSLRLFSILLAAVVSGAQGWGYYGCNEELVGPLYARSLGASSYYGLFTTARFARLHGISGWSP RIGDPNPWLQIDLMKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNATFFGNV NDSAVVRHDLHYHFTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDGDDAISYRFQRGA SQSLWDVFAFSFKTEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAG GVLNDLSWHYVRVDRYGREANLTLDGYVHRFVLNGDFERLNLENEIFIGGLVGAARKNLAYRHN FRGCIENVIYNRINIAEMAVQRHSRITFEGNVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRL AVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFWHEV NFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHGCMELLK VDGQLVNLTLVEFRKLGYFAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVT CHEPLYKESCEAYRLSGKYSGNYTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGS SMDRPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHF YWGGSQPGIQRCACGLDQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSSS EAQFFLRPLRCYGDRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFC QWRRPYVRVELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRP WVLRPMPLQTYIWLEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTG HCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRSAAQE FSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFS FSTSSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVNITRV YRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRF NNVAPLKTHFRTPRPMTAELAEAMRVQGELSESNCGAMPRLVSEVPPELDPWYLPPDFPYYHDD GWIAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDSHPGGKAPLPPSGPAQAP APTPAPTQVPTPAPAPASGPGPRDQNLPQILEESRSE hide sequence

RefSeq Acc Id:	XP_006247493 ⟸ XM_006247431
- Peptide Label:	isoform X3
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNATFFGNVNDSAVVRHDLHYH FTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDGDDAISYRFQRGASQSLWDVFAFSFK TEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDLSWHYVRV DRYGREANLTLDGYVHRFVLNGDFERLNLENEIFIGGLVGAARKNLAYRHNFRGCIENVIYNRI NIAEMAVQRHSRITFEGNVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTG LLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISI DDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEF RKLGYFAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPLYKESCEAY RLSGKYSGNYTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMDRPFLGAIQYW NASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCA CGLDQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSSSEAQFFLRPLRCYG DRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFCQWRRPYVRVELNT SRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIW LEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTGHCTHPRFPCFHGG RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRSAAQEFSHMLSRPVPGYE PGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVNITRVYRNLFIQVDYFPL TEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTP RPMTAELAEAMRVQGELSESNCGAMPRLVSEVPPELDPWYLPPDFPYYHDDGWIAILLGFLVAF LLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDSHPGGKAPLPPSGPAQAPAPTPAPTQVPTPA PAPASGPGPRDQNLPQILEESRSE hide sequence

RefSeq Acc Id:	XP_008766346 ⟸ XM_008768124
- Peptide Label:	isoform X3
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNATFFGNVNDSAVVRHDLHYH FTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDGDDAISYRFQRGASQSLWDVFAFSFK TEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDLSWHYVRV DRYGREANLTLDGYVHRFVLNGDFERLNLENEIFIGGLVGAARKNLAYRHNFRGCIENVIYNRI NIAEMAVQRHSRITFEGNVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTG LLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISI DDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEF RKLGYFAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPLYKESCEAY RLSGKYSGNYTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMDRPFLGAIQYW NASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCA CGLDQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSSSEAQFFLRPLRCYG DRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFCQWRRPYVRVELNT SRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIW LEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTGHCTHPRFPCFHGG RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRSAAQEFSHMLSRPVPGYE PGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVNITRVYRNLFIQVDYFPL TEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTP RPMTAELAEAMRVQGELSESNCGAMPRLVSEVPPELDPWYLPPDFPYYHDDGWIAILLGFLVAF LLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDSHPGGKAPLPPSGPAQAPAPTPAPTQVPTPA PAPASGPGPRDQNLPQILEESRSE hide sequence

RefSeq Acc Id:	XP_008766345 ⟸ XM_008768123
- Peptide Label:	isoform X3
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNATFFGNVNDSAVVRHDLHYH FTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDGDDAISYRFQRGASQSLWDVFAFSFK TEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDLSWHYVRV DRYGREANLTLDGYVHRFVLNGDFERLNLENEIFIGGLVGAARKNLAYRHNFRGCIENVIYNRI NIAEMAVQRHSRITFEGNVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTG LLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISI DDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEF RKLGYFAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPLYKESCEAY RLSGKYSGNYTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMDRPFLGAIQYW NASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCA CGLDQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSSSEAQFFLRPLRCYG DRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFCQWRRPYVRVELNT SRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIW LEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTGHCTHPRFPCFHGG RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRSAAQEFSHMLSRPVPGYE PGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVNITRVYRNLFIQVDYFPL TEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTP RPMTAELAEAMRVQGELSESNCGAMPRLVSEVPPELDPWYLPPDFPYYHDDGWIAILLGFLVAF LLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDSHPGGKAPLPPSGPAQAPAPTPAPTQVPTPA PAPASGPGPRDQNLPQILEESRSE hide sequence

RefSeq Acc Id:	XP_008766344 ⟸ XM_008768122
- Peptide Label:	isoform X1
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMSLRLFSILLAAVVSGAQGWGYYGCNEELVGPLYARSLGASSYYGLFTTARFARLHALAPFVG ISGWSPRIGDPNPWLQIDLMKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNA TFFGNVNDSAVVRHDLHYHFTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDGDDAISY RFQRGASQSLWDVFAFSFKTEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGH TTVSAGGVLNDLSWHYVRVDRYGREANLTLDGYVHRFVLNGDFERLNLENEIFIGGLVGAARKN LAYRHNFRGCIENVIYNRINIAEMAVQRHSRITFEGNVAFRCLDPVPHPINFGGPHNFVQVPGF PRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLND GFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHG CMELLKVDGQLVNLTLVEFRKLGYFAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELT GYKGVTCHEPLYKESCEAYRLSGKYSGNYTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWT TRVTGSSMDRPFLGAIQYWNASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGR NEEQHFYWGGSQPGIQRCACGLDQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGD TNRSSSEAQFFLRPLRCYGDRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLEN MGGPFCQWRRPYVRVELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARL RVDHRPWVLRPMPLQTYIWLEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGT FPNCTGHCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSAL RSAAQEFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTG EEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHS VNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGC LSGVRFNNVAPLKTHFRTPRPMTAELAEAMRVQGELSESNCGAMPRLVSEVPPELDPWYLPPDF PYYHDDGWIAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDSHPGGKAPLPPS GPAQAPAPTPAPTQVPTPAPAPASGPGPRDQNLPQILEESRSE hide sequence

RefSeq Acc Id:	XP_017453044 ⟸ XM_017597555
- Peptide Label:	isoform X3
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNATFFGNVNDSAVVRHDLHYH FTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDGDDAISYRFQRGASQSLWDVFAFSFK TEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDLSWHYVRV DRYGREANLTLDGYVHRFVLNGDFERLNLENEIFIGGLVGAARKNLAYRHNFRGCIENVIYNRI NIAEMAVQRHSRITFEGNVAFRCLDPVPHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTG LLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISI DDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEF RKLGYFAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPLYKESCEAY RLSGKYSGNYTIDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMDRPFLGAIQYW NASWEEVSALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCA CGLDQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSSSEAQFFLRPLRCYG DRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFCQWRRPYVRVELNT SRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIW LEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTGHCTHPRFPCFHGG RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRSAAQEFSHMLSRPVPGYE PGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSSAPAVLLYV SSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVNITRVYRNLFIQVDYFPL TEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTP RPMTAELAEAMRVQGELSESNCGAMPRLVSEVPPELDPWYLPPDFPYYHDDGWIAILLGFLVAF LLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDSHPGGKAPLPPSGPAQAPAPTPAPTQVPTPA PAPASGPGPRDQNLPQILEESRSE hide sequence

Ensembl Acc Id:

ENSRNOP00000027505 ⟸ ENSRNOT00000027505

RefSeq Acc Id:	XP_038942891 ⟸ XM_039086963
- Peptide Label:	isoform X4
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942890 ⟸ XM_039086962
- Peptide Label:	isoform X3
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942892 ⟸ XM_039086964
- Peptide Label:	isoform X4
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942888 ⟸ XM_039086960
- Peptide Label:	isoform X2
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942893 ⟸ XM_039086965
- Peptide Label:	isoform X4
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942889 ⟸ XM_039086961
- Peptide Label:	isoform X3
- UniProtKB:	A6HJ93 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000105521 ⟸ ENSRNOT00000170087

Ensembl Acc Id:

ENSRNOP00000100542 ⟸ ENSRNOT00000147033

Ensembl Acc Id:

ENSRNOP00000107259 ⟸ ENSRNOT00000122257

Protein Domains

EGF-like F5/8 type C Fibrinogen C-terminal Laminin G Laminin G-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P97846-F1-model_v2	AlphaFold	P97846	1-1381	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:70902	AgrOrtholog
BioCyc Gene	G2FUF-23194	BioCyc
Ensembl Genes	ENSRNOG00000020277	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000027505	ENTREZGENE
	ENSRNOT00000027505.7	UniProtKB/Swiss-Prot
	ENSRNOT00000122257	ENTREZGENE
	ENSRNOT00000147033	ENTREZGENE
Gene3D-CATH	2.60.120.1000	UniProtKB/Swiss-Prot
	2.60.120.200	UniProtKB/Swiss-Prot
	Galactose-binding domain-like	UniProtKB/Swiss-Prot
	Laminin	UniProtKB/Swiss-Prot
InterPro	ConA-like_dom_sf	UniProtKB/Swiss-Prot
	EGF-like_dom	UniProtKB/Swiss-Prot
	FA58C	UniProtKB/Swiss-Prot
	Fibrinogen-like_C	UniProtKB/Swiss-Prot
	Fibrinogen_a/b/g_C_dom	UniProtKB/Swiss-Prot
	Galactose-bd-like_sf	UniProtKB/Swiss-Prot
	Laminin_G	UniProtKB/Swiss-Prot
	Neurexin-like	UniProtKB/Swiss-Prot
	Neurexin-related_CASP	UniProtKB/Swiss-Prot
KEGG Report	rno:84008	UniProtKB/Swiss-Prot
NCBI Gene	84008	ENTREZGENE
PANTHER	CONTACTIN-ASSOCIATED PROTEIN 1	UniProtKB/Swiss-Prot
	PIKACHURIN-LIKE PROTEIN	UniProtKB/Swiss-Prot
Pfam	F5_F8_type_C	UniProtKB/Swiss-Prot
	Laminin_G_2	UniProtKB/Swiss-Prot
PhenoGen	Cntnap1	PhenoGen
PROSITE	EGF_3	UniProtKB/Swiss-Prot
	FA58C_1	UniProtKB/Swiss-Prot
	FA58C_2	UniProtKB/Swiss-Prot
	FA58C_3	UniProtKB/Swiss-Prot
	FIBRINOGEN_C_2	UniProtKB/Swiss-Prot
	LAM_G_DOMAIN	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000020277	RatGTEx
SMART	4.1m	UniProtKB/Swiss-Prot
	FA58C	UniProtKB/Swiss-Prot
	LamG	UniProtKB/Swiss-Prot
Superfamily-SCOP	EGF/Laminin	UniProtKB/Swiss-Prot
	SSF49785	UniProtKB/Swiss-Prot
	SSF49899	UniProtKB/Swiss-Prot
	SSF56496	UniProtKB/Swiss-Prot
UniProt	A0ABK0L7K5_RAT	UniProtKB/TrEMBL
	A0ABK0LQX6_RAT	UniProtKB/TrEMBL
	A0ABK0LRD1_RAT	UniProtKB/TrEMBL
	A6HJ93	ENTREZGENE, UniProtKB/TrEMBL
	CNTP1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-07-09	Cntnap1	contactin associated protein 1			Symbol and Name updated to reflect Human and Mouse nomenclature	70877	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_physical_interaction	binds the cytoskeletal-anchoring protein 4.1	727622

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM