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Gene: Zfp384 (zinc finger protein 384) Rattus norvegicus

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Symbol:

Zfp384

Name:

zinc finger protein 384

RGD ID:

708346

Description:

Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and SH3 domain binding activity. Involved in nucleocytoplasmic transport; positive regulation of protein secretion; and positive regulation of transcription by RNA polymerase II. Located in focal adhesion. Orthologous to human ZNF384 (zinc finger protein 384); INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Cas-associated zinc finger protein; Ciz; NMP4; nuclear matrix protein 4; nuclear matrix transcription factor 4; Znf384

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF384 (zinc finger protein 384)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, Treefam
Mus musculus (house mouse):	Zfp384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Znf384 (zinc finger protein 384)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ZNF384 (zinc finger protein 384)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp384 (zinc finger protein 384)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf384l (zinc finger protein 384 like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ZAP1	Alliance	DIOPT (Ensembl Compara\|Hieranoid)
Caenorhabditis elegans (roundworm):	lin-29	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PhylomeDB)
Drosophila melanogaster (fruit fly):	rn	Alliance	DIOPT (OrthoInspector\|SonicParanoid)
Danio rerio (zebrafish):	znf384b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf384b	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	znf384	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	znf384	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	159,496,481 - 159,526,010 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	159,496,729 - 159,526,010 (+)	Ensembl				GRCr8
mRatBN7.2	4	157,810,263 - 157,840,052 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	157,810,352 - 157,839,766 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	164,039,415 - 164,068,803 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	159,822,339 - 159,851,725 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	158,458,698 - 158,488,012 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	157,523,083 - 157,552,606 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	157,523,110 - 157,552,596 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	224,541,158 - 224,570,439 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	161,129,570 - 161,158,851 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	146,547,547 - 146,576,714 (+)	NCBI		Celera
RGSC_v3.1	4	161,374,505 - 161,403,679 (+)	NCBI
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

ammonium chloride (EXP)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

casticin (ISO)

CGP 52608 (ISO)

copper atom (EXP)

copper(0) (EXP)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

flavonoids (EXP)

indometacin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

Monobutylphthalate (EXP)

N-nitrosodiethylamine (EXP)

nitrates (ISO)

paracetamol (EXP)

phenethyl caffeate (EXP)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

triptonide (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

nucleocytoplasmic transport (IMP)

positive regulation of protein secretion (IDA)

positive regulation of transcription by RNA polymerase II (IDA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

focal adhesion (IDA)

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IDA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

metal ion binding (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IDA)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IBA)

sequence-specific DNA binding (IDA)

sequence-specific double-stranded DNA binding (IEA,ISO)

SH3 domain binding (IMP)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	CIZ, a zinc finger protein that interacts with p130(cas) and activates the expression of matrix metalloproteinases.	Nakamoto T, etal., Mol Cell Biol 2000 Mar;20(5):1649-58.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Cloning and functional analysis of a family of nuclear matrix transcription factors (NP/NMP4) that regulate type I collagen expression in osteoblasts.	Thunyakitpisal P, etal., J Bone Miner Res 2001 Jan;16(1):10-23.

Additional References at PubMed

PMID:8889548	PMID:12052465	PMID:12477932	PMID:15026307	PMID:18211825

Genomics

Comparative Map Data

Zfp384
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	159,496,481 - 159,526,010 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	159,496,729 - 159,526,010 (+)	Ensembl				GRCr8
mRatBN7.2	4	157,810,263 - 157,840,052 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	157,810,352 - 157,839,766 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	164,039,415 - 164,068,803 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	159,822,339 - 159,851,725 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	158,458,698 - 158,488,012 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	157,523,083 - 157,552,606 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	157,523,110 - 157,552,596 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	224,541,158 - 224,570,439 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	161,129,570 - 161,158,851 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	146,547,547 - 146,576,714 (+)	NCBI		Celera
RGSC_v3.1	4	161,374,505 - 161,403,679 (+)	NCBI
Cytogenetic Map	4	q42	NCBI

ZNF384
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	6,666,477 - 6,689,572 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	6,666,477 - 6,689,572 (-)	Ensembl			hg38	GRCh38
GRCh37	12	6,775,643 - 6,798,738 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	6,645,904 - 6,668,930 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	6,646,077 - 6,668,751	NCBI
Celera	12	8,392,661 - 8,415,699 (-)	NCBI		Celera
Cytogenetic Map	12	p13.31	NCBI
HuRef	12	6,628,938 - 6,652,021 (-)	NCBI		HuRef
CHM1_1	12	6,774,632 - 6,797,719 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	6,676,834 - 6,699,927 (-)	NCBI		T2T-CHM13v2.0

Zfp384
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	124,985,980 - 125,014,833 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	124,986,108 - 125,014,833 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	125,009,017 - 125,037,870 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	125,009,145 - 125,037,870 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	124,959,823 - 124,987,887 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	124,975,424 - 125,003,253 (+)	NCBI		MGSCv36	mm8
Celera	6	126,679,140 - 126,707,571 (+)	NCBI		Celera
Cytogenetic Map	6	F2	NCBI
cM Map	6	59.17	NCBI

Znf384
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	4,278,248 - 4,290,550 (-)	Ensembl
ChiLan1.0	NW_004955413	4,277,059 - 4,302,638 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF384
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	12,229,183 - 12,252,632 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	12,225,941 - 12,249,363 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	6,798,264 - 6,821,705 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	6,714,248 - 6,738,018 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	6,714,248 - 6,738,018 (-)	Ensembl			panPan2	panpan1.1

ZNF384
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	38,350,050 - 38,369,338 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	38,349,803 - 38,369,341 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	8,247,115 - 8,266,600 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	38,703,035 - 38,722,869 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	38,702,972 - 38,723,314 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	38,576,663 - 38,596,146 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	38,618,184 - 38,637,672 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	7,726,026 - 7,745,519 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Znf384
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	102,446,555 - 102,470,369 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936709	1,113,974 - 1,138,478 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936709	1,114,105 - 1,137,918 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF384
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	64,003,216 - 64,025,796 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	64,003,468 - 64,025,798 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	66,555,324 - 66,577,820 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF384
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	6,699,988 - 6,725,282 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	6,697,989 - 6,713,322 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	1,501,010 - 1,525,838 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf384
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624860	3,365,339 - 3,389,346 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624860	3,365,103 - 3,389,907 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Znf384
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	22,857,543 - 22,887,258 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfp384
202 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1454
Count of miRNA genes:	278
Interacting mature miRNAs:	356
Transcripts:	ENSRNOT00000023192, ENSRNOT00000023240, ENSRNOT00000036654, ENSRNOT00000055985
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	146370897	184426481	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	134095016	179095016	Rat
1582237	Kidm34	Kidney mass QTL 34	4	0.0001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	4	149763204	169799698	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	146370897	184426481	Rat
6478757	Anxrr44	Anxiety related response QTL 44		0.01087	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
1358364	Sradr4	Stress Responsive Adrenal Weight QTL 4	4.92		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	131384565	176384565	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	123870974	168870974	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	117559384	162559384	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	140059299	181024663	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
10053718	Scort25	Serum corticosterone level QTL 25	2.15	0.0097	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	157292416	184426481	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	94638356	168870820	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	106848959	168870974	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	127263297	172263297	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	126334185	171334185	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	147299608	184426481	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
6478782	Anxrr52	Anxiety related response QTL 52		0.02091	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	124700988	169700988	Rat
6478720	Alc23	Alcohol consumption QTL 23		0.00509	drinking behavior trait (VT:0001422)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	155834926	184426481	Rat
6478785	Anxrr53	Anxiety related response QTL 53		0.01397	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	100752691	179366077	Rat
1581566	Eae21	Experimental allergic encephalomyelitis QTL 21	6.2		body mass (VT:0001259)	maximum body weight loss to initial body weight ratio (CMO:0001400)	4	137447185	182447185	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	137430611	182430611	Rat
6478728	Anxrr36	Anxiety related response QTL 36		0.01061	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	86709649	168870974	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	134199006	168870974	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	148121375	176967367	Rat
6478733	Anxrr37	Anxiety related response QTL 37		0.00095	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
6478737	Anxrr38	Anxiety related response QTL 38		0.00159	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	116184844	161184844	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
12798525	Anxrr57	Anxiety related response QTL 57	3.21	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	148834094	168870974	Rat

Markers in Region

BB163993

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	4	159,525,713 - 159,525,827 (+)	Marker Load Pipeline
mRatBN7.2	4	157,839,470 - 157,839,584 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	157,552,305 - 157,552,418	NCBI	Rnor6.0
Rnor_5.0	4	224,570,143 - 224,570,256	UniSTS	Rnor5.0
RGSC_v3.4	4	161,158,555 - 161,158,668	UniSTS	RGSC3.4
Celera	4	146,576,418 - 146,576,531	UniSTS
Cytogenetic Map	4	q42	UniSTS

RH140077

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	157,839,189 - 157,839,392 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	157,552,024 - 157,552,226	NCBI	Rnor6.0
Rnor_5.0	4	224,569,862 - 224,570,064	UniSTS	Rnor5.0
RGSC_v3.4	4	161,158,274 - 161,158,476	UniSTS	RGSC3.4
Celera	4	146,576,137 - 146,576,339	UniSTS
RH 3.4 Map	4	1004.3	UniSTS
Cytogenetic Map	4	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001034830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001034831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_133429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB019281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC115415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF216804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF216805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF216806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF216807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE102290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO567724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000023192 ⟹ ENSRNOP00000023192

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	159,496,729 - 159,526,010 (+)	Ensembl
mRatBN7.2 Ensembl	4	157,810,486 - 157,839,766 (+)	Ensembl
Rnor_6.0 Ensembl	4	157,523,320 - 157,552,596 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000023240 ⟹ ENSRNOP00000023242

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	159,497,180 - 159,526,010 (+)	Ensembl
mRatBN7.2 Ensembl	4	157,810,937 - 157,839,766 (+)	Ensembl
Rnor_6.0 Ensembl	4	157,523,771 - 157,552,596 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000036654 ⟹ ENSRNOP00000037592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	159,496,729 - 159,526,010 (+)	Ensembl
mRatBN7.2 Ensembl	4	157,810,486 - 157,839,766 (+)	Ensembl
Rnor_6.0 Ensembl	4	157,524,423 - 157,552,356 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000055985 ⟹ ENSRNOP00000052839

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	159,497,180 - 159,526,010 (+)	Ensembl
mRatBN7.2 Ensembl	4	157,810,937 - 157,839,766 (+)	Ensembl
Rnor_6.0 Ensembl	4	157,523,770 - 157,552,596 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081640 ⟹ ENSRNOP00000072846

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	159,496,729 - 159,526,010 (+)	Ensembl
mRatBN7.2 Ensembl	4	157,810,486 - 157,839,766 (+)	Ensembl
Rnor_6.0 Ensembl	4	157,523,110 - 157,551,649 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000086418 ⟹ ENSRNOP00000074298

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	159,496,729 - 159,525,861 (+)	Ensembl
mRatBN7.2 Ensembl	4	157,810,352 - 157,839,522 (+)	Ensembl
Rnor_6.0 Ensembl	4	157,538,303 - 157,546,471 (+)	Ensembl

RefSeq Acc Id:

NM_001034830 ⟹ NP_001030002

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,497,179 - 159,526,010 (+)	NCBI
mRatBN7.2	4	157,810,936 - 157,839,767 (+)	NCBI
Rnor_6.0	4	157,523,770 - 157,552,601 (+)	NCBI
Rnor_5.0	4	224,541,158 - 224,570,439 (+)	NCBI
RGSC_v3.4	4	161,129,570 - 161,158,851 (+)	RGD
Celera	4	146,547,997 - 146,576,714 (+)	NCBI

Sequence:

show sequence

GGGACGTCCCAAAGACCGGTCTTTGAGGAAGGAGTGGGACTTGACATCGGAAGGACCCAGTTCG
GTGTCTCAGGGGAGCGAAGGTTTTAGGGGGCCAGCTGGGAGTCTCCAGTATATAGACCACTGAA
GGTTGAAGGAGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAAGACGACAGGAGGAAGAGAG
AGAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCA
CGGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGAAGGATCAGCTGTTGCCAGA
GAAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGACAGTGCCTGCCTCAGTGTCC
CTGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCACACAGTCAGG
CATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAGGACTCATGACTGCGGGAGT
CTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGGTAATCACA
TCCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACTTTCCCTATCTCGACTCCCA
TGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGGTCCCTGACCTCTCCAAGAA
GGTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCACTGTGGCTCCT
CCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCAGGGCTTCCTGAGATGAATG
ACCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAGATGGCAAGACCTACAGGTG
CCGGATGTGCTCACTGACCTTCTACTCAAAGTCGGAGATGCAGATCCACTCCAAGTCACACACC
GAGACCAAGCCCCACAAGTGCCCACACTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCC
AGCACATCCGTATCCATTCAGGGGCCAAGCCCTATAGTTGTAACTTTTGTGAGAAATCCTTCCG
TCAGCTCTCACACCTGCAGCAGCACACCCGGATTCACTCCAAGATGCACACGGAGACCATCAAG
CCCCACAAGTGCCCGCACTGCTCCAAGACCTTCGCCAACACCTCCTACCTGGCCCAGCACCTCC
GTATCCACTCGGGGGCCAAGCCCTACAACTGTTCCTACTGCCAGAAGGCCTTCCGCCAGCTCTC
CCACCTCCAGCAGCACACACGAATCCACACTGGCGATAGACCATACAAATGTGCACACCCGGGC
TGCGAGAAGGCTTTCACACAACTCTCCAACCTGCAGTCTCACAGACGGCAGCACAACAAAGATA
AACCCTTCAAGTGCCACAACTGTCACCGAGCATACACAGACGCAGCCTCACTAGAGGCTCATTT
ATCTACACACACAGTGAAGCACGCCAAGGTTTATACCTGCACAATCTGTAGTCGGGCATATACA
TCAGAAACATATCTTATGAAACATATGCGCAAACACAACCCTCCTGATCTCCAACAACAAGTGC
AAGCGGCGGCAGCGGCAGCGGCAGTGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAGGCCCAGGC
CCAGGCTCAGGCCCAGGCCCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAAGCTTCACAGGCA
TCACAGCAGCAGCAACAGCAGCAGCCACCACCTCCACAACCACCACACTTCCAGTCTCCTGGGG
CAGCTCCCCAGGGAGGGGGTGGTGGGGACAGCAACCAGAACCCTCCACCCCAGTGTTCCTTTGA
CCTGACCCCCTATAAGCCGGCAGAGCATCATAAAGACATCTGCCTCACTGTCACCACCAGCACC
ATCCAGGTGGAACACCTGGCCAGCTCTTAGAGATCCGTACTGCCATCCATTGGAAAGGGGAGAA
GTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGTTCTCTTCTTCCTTGACAAGTCCT
GTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTAATCTCAGC
TGCTCCTGATTGGCCAAGGAATCCTGAGCTGATAGTGTTATCCAACAGCCCCCATCCAAGCAGA
GCTTTTAAAACTGGGGCTTGGTGCTTGAGAGAAGGATCCGCTGTAACCTCACATCTTGTCCAGT
GTGTGGGCGATTACCTTTCTCTCCATCCTCAAAGTTGGGGCTGATAGAAGACTAGTGGCTGGCC
CTCCCAGATAACAGAGAAGGAAGCTCTAAATGTCGCCAGCCTTCCGTTCTATGCTTACCTGTAA
AAGAACAGATTTTGCACGTGGCCTGATCCCTGTGAGCCATTTTCTTCCCCTTACATGGTCTCAC
TTCATATTGGGTGGTGACTATACCTTTTTTATTTGTAAGGGGGGCAATAGCTGATACATGGTCA
CCAAGGTGCCAGAGATTCCCCAGGTGACCAACGGTGGCTTAAGAGTGTGAGTTACCATTTTTCC
TTACAACCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCACTACCCCAGTCCA
AGGAGCTCTGGGAGCTGTGTAAGCTGTGTTCTCTGCGATGCCATCTGGGCTTTGCAGAGAAGGG
AGAATTCAGGGCACACACAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGATGCCGGACA
TGGATTTATATATAAATATATATATATAAATATATATATATACCTGCTCATCACGGCCATCTTT
GTTGTAACCATTTCTGTGTTTATAAATGCATTATCTCTGAGAATTTTCATATTGATGTTTTATT
TTTGTCTTATTTTTTTTTCTCCACCTTGTCCTCTGGCCATGGCATTTTAATTTTCTTTTCCCTT
TCAATTTTTTTAATCATGGGAAATTTCAGATAAAAGAAAATTAAAATAATCAGGAATTATACAG
TTGTTATAAAGCAATTTAAAAATGAAAAACTTATGTACAAACTAAGGGGTGTTTTTAGAACATT
GTACAGAAATAAATTTGTGTTTAAGGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001034831 ⟹ NP_001030003

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,497,180 - 159,526,010 (+)	NCBI
mRatBN7.2	4	157,810,937 - 157,839,767 (+)	NCBI
Rnor_6.0	4	157,523,771 - 157,552,601 (+)	NCBI
Rnor_5.0	4	224,541,158 - 224,570,439 (+)	NCBI
RGSC_v3.4	4	161,129,570 - 161,158,851 (+)	RGD
Celera	4	146,547,998 - 146,576,714 (+)	NCBI

Sequence:

show sequence

GGACGTCCCAAAGACCGGTCTTTGAGGAAGGAGTGGGACTTGACATCGGAAGGACCCAGTTCGG
TGTCTCAGGGGAGCGAAGGTTTTAGGGGGCCAGCTGGGAGTCTCCAGTATATAGACCACTGAAG
GTTGAAGGAGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAAGACGACAGGAGGAAGAGAGA
GAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCAC
GGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGAAGGATCAGCTGTTGCCAGAG
AAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGACAGTGCCTGCCTCAGTGTCCC
TGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCACACAGTCAGGC
ATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAGGACTCATGACTGCGGGAGTC
TCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGGTAATCACAT
CCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACTTTCCCTATCTCGACTCCCAT
GATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGGTCCCTGACCTCTCCAAGAAG
GTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCACTGTGGCTCCTC
CTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCAGGGCTTCCTGAGATGAATGA
CCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAGATGGCAAGACCTACAGGTGC
CGGATGTGCTCACTGACCTTCTACTCAAAGTCGGAGATGCAGATCCACTCCAAGTCACACACCG
AGACCAAGCCCCACAAGTGCCCACACTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCA
GCACATCCGTATCCATTCAGGGGCCAAGCCCTATAGTTGTAACTTTTGTGAGAAATCCTTCCGT
CAGCTCTCACACCTGCAGCAGCACACCCGAATCCACACTGGCGATAGACCATACAAATGTGCAC
ACCCGGGCTGCGAGAAGGCTTTCACACAACTCTCCAACCTGCAGTCTCACAGACGGCAGCACAA
CAAAGATAAACCCTTCAAGTGCCACAACTGTCACCGAGCATACACAGACGCAGCCTCACTAGAG
GCTCATTTATCTACACACACAGTGAAGCACGCCAAGGTTTATACCTGCACAATCTGTAGTCGGG
CATATACATCAGAAACATATCTTATGAAACATATGCGCAAACACAACCCTCCTGATCTCCAACA
ACAAGTGCAAGCGGCGGCAGCGGCAGCGGCAGTGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAG
GCCCAGGCCCAGGCTCAGGCCCAGGCCCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAAGCTT
CACAGGCATCACAGCAGCAGCAACAGCAGCAGCCACCACCTCCACAACCACCACACTTCCAGTC
TCCTGGGGCAGCTCCCCAGGGAGGGGGTGGTGGGGACAGCAACCAGAACCCTCCACCCCAGTGT
TCCTTTGACCTGACCCCCTATAAGCCGGCAGAGCATCATAAAGACATCTGCCTCACTGTCACCA
CCAGCACCATCCAGGTGGAACACCTGGCCAGCTCTTAGAGATCCGTACTGCCATCCATTGGAAA
GGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGTTCTCTTCTTCCTTGA
CAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTA
ATCTCAGCTGCTCCTGATTGGCCAAGGAATCCTGAGCTGATAGTGTTATCCAACAGCCCCCATC
CAAGCAGAGCTTTTAAAACTGGGGCTTGGTGCTTGAGAGAAGGATCCGCTGTAACCTCACATCT
TGTCCAGTGTGTGGGCGATTACCTTTCTCTCCATCCTCAAAGTTGGGGCTGATAGAAGACTAGT
GGCTGGCCCTCCCAGATAACAGAGAAGGAAGCTCTAAATGTCGCCAGCCTTCCGTTCTATGCTT
ACCTGTAAAAGAACAGATTTTGCACGTGGCCTGATCCCTGTGAGCCATTTTCTTCCCCTTACAT
GGTCTCACTTCATATTGGGTGGTGACTATACCTTTTTTATTTGTAAGGGGGGCAATAGCTGATA
CATGGTCACCAAGGTGCCAGAGATTCCCCAGGTGACCAACGGTGGCTTAAGAGTGTGAGTTACC
ATTTTTCCTTACAACCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCACTACC
CCAGTCCAAGGAGCTCTGGGAGCTGTGTAAGCTGTGTTCTCTGCGATGCCATCTGGGCTTTGCA
GAGAAGGGAGAATTCAGGGCACACACAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGAT
GCCGGACATGGATTTATATATAAATATATATATATAAATATATATATATACCTGCTCATCACGG
CCATCTTTGTTGTAACCATTTCTGTGTTTATAAATGCATTATCTCTGAGAATTTTCATATTGAT
GTTTTATTTTTGTCTTATTTTTTTTTCTCCACCTTGTCCTCTGGCCATGGCATTTTAATTTTCT
TTTCCCTTTCAATTTTTTTAATCATGGGAAATTTCAGATAAAAGAAAATTAAAATAATCAGGAA
TTATACAGTTGTTATAAAGCAATTTAAAAATGAAAAACTTATGTACAAACTAAGGGGTGTTTTT
AGAACATTGTACAGAAATAAATTTGTGTTTAAGGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_133429 ⟹ NP_596920

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,729 - 159,526,010 (+)	NCBI
mRatBN7.2	4	157,810,486 - 157,839,767 (+)	NCBI
Rnor_6.0	4	157,523,320 - 157,552,601 (+)	NCBI
Rnor_5.0	4	224,541,158 - 224,570,439 (+)	NCBI
RGSC_v3.4	4	161,129,570 - 161,158,851 (+)	RGD
Celera	4	146,547,547 - 146,576,714 (+)	RGD

Sequence:

show sequence

ACGCTGCCTCGCGCCCCCGCCCTGCGGGTGTGTAGCGCGTAGCCCGTGCGAGTGTAGGGGTCTG
TCTCGCGCCTGCAGTGCATGCCCGCGCGCCCGGCCTCGCGTCCCCTGTCCCGCGCCCTGCGAGC
CCTCCCACTCCCTCGGCTCCTTCCTTTCCCAGTGAACGCCGCCCCTCCCGCGCGCTGGCTCTGG
CGCTGGCGCCGGCGCCGTCGCCGCCGCCTGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAA
GACGACAGGAGGAAGAGAGAGAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTAC
TTCTGGCCTTCTATCCCCACGGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGA
AGGATCAGCTGTTGCCAGAGAAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGAC
AGTGCCTGCCTCAGTGTCCCTGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAG
CTGACCCCACACAGTCAGGCATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAG
GACTCATGACTGCGGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGG
TCCTGGTTTGGTAATCACATCCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACT
TTCCCTATCTCGACTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGG
TCCCTGACCTCTCCAAGAAGGTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGG
AGGTGGCACTGTGGCTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCA
GGGCTTCCTGAGATGAATGACCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAG
ATGGCAAGACCTACAGGTGCCGGATGTGCTCACTGACCTTCTACTCAAAGTCGGAGATGCAGAT
CCACTCCAAGTCACACACCGAGACCAAGCCCCACAAGTGCCCACACTGCTCCAAGACCTTCGCC
AACAGCTCCTACCTGGCCCAGCACATCCGTATCCATTCAGGGGCCAAGCCCTATAGTTGTAACT
TTTGTGAGAAATCCTTCCGTCAGCTCTCACACCTGCAGCAGCACACCCGGATTCACTCCAAGAT
GCACACGGAGACCATCAAGCCCCACAAGTGCCCGCACTGCTCCAAGACCTTCGCCAACACCTCC
TACCTGGCCCAGCACCTCCGTATCCACTCGGGGGCCAAGCCCTACAACTGTTCCTACTGCCAGA
AGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGCACACACGAATCCACACTGGCGATAGACCATA
CAAATGTGCACACCCGGGCTGCGAGAAGGCTTTCACACAACTCTCCAACCTGCAGTCTCACAGA
CGGCAGCACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCACCGAGCATACACAGACGCAG
CCTCACTAGAGGCTCATTTATCTACACACACAGTGAAGCACGCCAAGGTTTATACCTGCACAAT
CTGTAGTCGGGCATATACATCAGAAACATATCTTATGAAACATATGCGCAAACACAACCCTCCT
GATCTCCAACAACAAGTGCAAGCGGCGGCAGCGGCAGCGGCAGTGGCCCAGGCTCAGGCCCAGG
CTCAGGCTCAGGCCCAGGCCCAGGCTCAGGCCCAGGCCCAGGCCCAGGCTCAGGCTCAGGCCCA
GGCCCAAGCTTCACAGGCATCACAGCAGCAGCAACAGCAGCAGCCACCACCTCCACAACCACCA
CACTTCCAGTCTCCTGGGGCAGCTCCCCAGGGAGGGGGTGGTGGGGACAGCAACCAGAACCCTC
CACCCCAGTGTTCCTTTGACCTGACCCCCTATAAGCCGGCAGAGCATCATAAAGACATCTGCCT
CACTGTCACCACCAGCACCATCCAGGTGGAACACCTGGCCAGCTCTTAGAGATCCGTACTGCCA
TCCATTGGAAAGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGTTCTC
TTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTTCGCAAGAT
AACCATCCTTAATCTCAGCTGCTCCTGATTGGCCAAGGAATCCTGAGCTGATAGTGTTATCCAA
CAGCCCCCATCCAAGCAGAGCTTTTAAAACTGGGGCTTGGTGCTTGAGAGAAGGATCCGCTGTA
ACCTCACATCTTGTCCAGTGTGTGGGCGATTACCTTTCTCTCCATCCTCAAAGTTGGGGCTGAT
AGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCTCTAAATGTCGCCAGCCTTCC
GTTCTATGCTTACCTGTAAAAGAACAGATTTTGCACGTGGCCTGATCCCTGTGAGCCATTTTCT
TCCCCTTACATGGTCTCACTTCATATTGGGTGGTGACTATACCTTTTTTATTTGTAAGGGGGGC
AATAGCTGATACATGGTCACCAAGGTGCCAGAGATTCCCCAGGTGACCAACGGTGGCTTAAGAG
TGTGAGTTACCATTTTTCCTTACAACCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCA
GTCTCACTACCCCAGTCCAAGGAGCTCTGGGAGCTGTGTAAGCTGTGTTCTCTGCGATGCCATC
TGGGCTTTGCAGAGAAGGGAGAATTCAGGGCACACACAGGACTGGACTTAGCCTCCCTAGGTGC
CACGGTCAGATGCCGGACATGGATTTATATATAAATATATATATATAAATATATATATATACCT
GCTCATCACGGCCATCTTTGTTGTAACCATTTCTGTGTTTATAAATGCATTATCTCTGAGAATT
TTCATATTGATGTTTTATTTTTGTCTTATTTTTTTTTCTCCACCTTGTCCTCTGGCCATGGCAT
TTTAATTTTCTTTTCCCTTTCAATTTTTTTAATCATGGGAAATTTCAGATAAAAGAAAATTAAA
ATAATCAGGAATTATACAGTTGTTATAAAGCAATTTAAAAATGAAAAACTTATGTACAAACTAA
GGGGTGTTTTTAGAACATTGTACAGAAATAAATTTGTGTTTAAGGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006237327 ⟹ XP_006237389

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,525,769 (+)	NCBI
mRatBN7.2	4	157,810,691 - 157,840,052 (+)	NCBI
Rnor_6.0	4	157,523,548 - 157,552,606 (+)	NCBI
Rnor_5.0	4	224,541,158 - 224,570,439 (+)	NCBI

Sequence:

show sequence

CTCGCGCCGCTGTAGTCGGTGCGCGCCAAGCCCCTTGCTCCTCCCCCTCCCCTTTTCCTTGGGG
GAGCGGGGAGGGGGGGTCCACGATGTGACTAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAA
GACGACAGGAGGAAGAGAGAGAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTAC
TTCTGGCCTTCTATCCCCACGGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGA
AGGATCAGCTGTTGCCAGAGAAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGAC
AGTGCCTGCCTCAGTGTCCCTGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAG
CTGACCCCACACAGTCAGGCATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAG
GACTCATGACTGCGGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGG
TCCTGGTTTGGTAATCACATCCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACT
TTCCCTATCTCGACTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGG
TCCCTGACCTCTCCAAGAAGGTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGG
AGGTGGCACTGTGGCTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCA
GGGCTTCCTGAGATGAATGACCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAG
ATGGCAAGACCTACAGGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCAT
GGATTCAGTTCCCGGCTCCACCACGAACTTGCTGTGTGACCCTGGGTGCCGGATGTGCTCACTG
ACCTTCTACTCAAAGTCGGAGATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACA
AGTGCCCACACTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATCCA
TTCAGGGGCCAAGCCCTATAGTTGTAACTTTTGTGAGAAATCCTTCCGTCAGCTCTCACACCTG
CAGCAGCACACCCGGATTCACTCCAAGATGCACACGGAGACCATCAAGCCCCACAAGTGCCCGC
ACTGCTCCAAGACCTTCGCCAACACCTCCTACCTGGCCCAGCACCTCCGTATCCACTCGGGGGC
CAAGCCCTACAACTGTTCCTACTGCCAGAAGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGCAC
ACACGAATCCACACTGGCGATAGACCATACAAATGTGCACACCCGGGCTGCGAGAAGGCTTTCA
CACAACTCTCCAACCTGCAGTCTCACAGACGGCAGCACAACAAAGATAAACCCTTCAAGTGCCA
CAACTGTCACCGAGCATACACAGACGCAGCCTCACTAGAGGCTCATTTATCTACACACACAGTG
AAGCACGCCAAGGTTTATACCTGCACAATCTGTAGTCGGGCATATACATCAGAAACATATCTTA
TGAAACATATGCGCAAACACAACCCTCCTGATCTCCAACAACAAGTGCAAGCGGCGGCAGCGGC
AGCGGCAGTGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAGGCTCAGGCCCAG
GCCCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAAGCTTCACAGGCATCACAGCAGCAGCAAC
AGCAGCAGCCACCACCTCCACAACCACCACACTTCCAGTCTCCTGGGGCAGCTCCCCAGGGAGG
GGGTGGTGGGGACAGCAACCAGAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCCTATAAG
CCGGCAGAGCATCATAAAGACATCTGCCTCACTGTCACCACCAGCACCATCCAGGTGGAACACC
TGGCCAGCTCTTAGAGATCCGTACTGCCATCCATTGGAAAGGGGAGAAGTCCTGGTCCCTCCTT
TGTCAACTCTTCTTGGTGGGAAAGTTCTCTTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGG
GTCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTAATCTCAGCTGCTCCTGATTGGCCA
AGGAATCCTGAGCTGATAGTGTTATCCAACAGCCCCCATCCAAGCAGAGCTTTTAAAACTGGGG
CTTGGTGCTTGAGAGAAGGATCCGCTGTAACCTCACATCTTGTCCAGTGTGTGGGCGATTACCT
TTCTCTCCATCCTCAAAGTTGGGGCTGATAGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAG
AAGGAAGCTCTAAATGTCGCCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
CGTGGCCTGATCCCTGTGAGCCATTTTCTTCCCCTTACATGGTCTCACTTCATATTGGGTGGTG
ACTATACCTTTTTTATTTGTAAGGGGGGCAATAGCTGATACATGGTCACCAAGGTGCCAGAGAT
TCCCCAGGTGACCAACGGTGGCTTAAGAGTGTGAGTTACCATTTTTCCTTACAACCTCCTTCCT
TCTCTGCCAACCAAGGGCCTATATACTCAGTCTCACTACCCCAGTCCAAGGAGCTCTGGGAGCT
GTGTAAGCTGTGTTCTCTGCGATGCCATCTGGGCTTTGCAGAGAAGGGAGAATTCAGGGCACAC
ACAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGATGCCGGACATGGATTTATATATAAA
TATATATATATAAATATATATATATACCTGCTCATCACGGCCATCTTTGTTGTAACCATTTCTG
TGTTTATAAATGCATTATCTCTGAGAATTTTCATATTGATGTTTTATTTTTGTCTTATTTTTTT
TTTCTCCACCTTGTCCTCTGGCCATGGCATTTTAATTTTCTTTTCCCTTTCAATTTTTTTAATC
ATGGGAAATTTCAGATAAAAGAAAATTAAAATAATCAGGAATTATACAGTTGTTATAAAGCAAT
TTAAAAATGAAAAACTTATGTACAAACTAAGGGGTGTTTTTAGAACATTGTACAGAAATAAATT
TGTGTTTAAGGATGAGA

hide sequence

RefSeq Acc Id:

XM_017592413 ⟹ XP_017447902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,508 - 159,525,769 (+)	NCBI
mRatBN7.2	4	157,810,263 - 157,840,052 (+)	NCBI
Rnor_6.0	4	157,523,083 - 157,552,606 (+)	NCBI

Sequence:

show sequence

CGGTCTCTGAACTCTTTCCCCCCCCCTTTCCTGCTGCCGCCCTCCCACCGCTATTTTCCTCCCT
CCCCCGCCCCCTTTTCGTTTCCGGCTCTCCCGCCTTCTCCGCAAAACGACTGCTCATTGAGGCT
ATTGGGGAGGGGGCGGGGAGGAAAAGTGGGCGTGGAGGAATTGGGGTTCCCGGGAGCACGAGCC
GCAGCACCACTTCCGGTGCATGCCCGCGCGCCCGGCCTCGCGTCCCCTGTCCCGCGCCCTGCGA
GCCCTCCCACTCCCTCGGCTCCTTCCTTTCCCAGTGAACGCCGCCCCTCCCGCGCGCTGGCTCT
GGCGCTGGCGCCGGCGCCGTCGCCGCCGCCTGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAAT
AAGACGACAGGAGGAAGAGAGAGAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGT
ACTTCTGGCCTTCTATCCCCACGGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGAT
GAAGGATCAGCTGTTGCCAGAGAAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTG
ACAGTGCCTGCCTCAGTGTCCCTGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAAC
AGCTGACCCCACACAGTCAGGCATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTAC
AGGACTCATGACTGCGGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGG
GGTCCTGGTTTGGTAATCACATCCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGA
CTTTCCCTATCTCGACTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGT
GGTCCCTGACCTCTCCAAGAAGGTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGT
GGAGGTGGCACTGTGGCTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAAT
CAGGGCTTCCTGAGATGAATGACCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAA
AGATGGCAAGACCTACAGGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTC
ATGGATTCAGTTCCCGGCTCCACCACGAACTTGCTGTGTGACCCTGGGTGCCGGATGTGCTCAC
TGACCTTCTACTCAAAGTCGGAGATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCA
CAAGTGCCCACACTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATC
CATTCAGGGGCCAAGCCCTATAGTTGTAACTTTTGTGAGAAATCCTTCCGTCAGCTCTCACACC
TGCAGCAGCACACCCGGATTCACTCCAAGATGCACACGGAGACCATCAAGCCCCACAAGTGCCC
GCACTGCTCCAAGACCTTCGCCAACACCTCCTACCTGGCCCAGCACCTCCGTATCCACTCGGGG
GCCAAGCCCTACAACTGTTCCTACTGCCAGAAGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGC
ACACACGAATCCACACTGGCGATAGACCATACAAATGTGCACACCCGGGCTGCGAGAAGGCTTT
CACACAACTCTCCAACCTGCAGTCTCACAGACGGCAGCACAACAAAGATAAACCCTTCAAGTGC
CACAACTGTCACCGAGCATACACAGACGCAGCCTCACTAGAGGCTCATTTATCTACACACACAG
TGAAGCACGCCAAGGTTTATACCTGCACAATCTGTAGTCGGGCATATACATCAGAAACATATCT
TATGAAACATATGCGCAAACACAACCCTCCTGATCTCCAACAACAAGTGCAAGCGGCGGCAGCG
GCAGCGGCAGTGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAGGCTCAGGCCC
AGGCCCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAAGCTTCACAGGCATCACAGCAGCAGCA
ACAGCAGCAGCCACCACCTCCACAACCACCACACTTCCAGTCTCCTGGGGCAGCTCCCCAGGGA
GGGGGTGGTGGGGACAGCAACCAGAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCCTATA
AGCCGGCAGAGCATCATAAAGACATCTGCCTCACTGTCACCACCAGCACCATCCAGGTGGAACA
CCTGGCCAGCTCTTAGAGATCCGTACTGCCATCCATTGGAAAGGGGAGAAGTCCTGGTCCCTCC
TTTGTCAACTCTTCTTGGTGGGAAAGTTCTCTTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTT
GGGTCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTAATCTCAGCTGCTCCTGATTGGC
CAAGGAATCCTGAGCTGATAGTGTTATCCAACAGCCCCCATCCAAGCAGAGCTTTTAAAACTGG
GGCTTGGTGCTTGAGAGAAGGATCCGCTGTAACCTCACATCTTGTCCAGTGTGTGGGCGATTAC
CTTTCTCTCCATCCTCAAAGTTGGGGCTGATAGAAGACTAGTGGCTGGCCCTCCCAGATAACAG
AGAAGGAAGCTCTAAATGTCGCCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTG
CACGTGGCCTGATCCCTGTGAGCCATTTTCTTCCCCTTACATGGTCTCACTTCATATTGGGTGG
TGACTATACCTTTTTTATTTGTAAGGGGGGCAATAGCTGATACATGGTCACCAAGGTGCCAGAG
ATTCCCCAGGTGACCAACGGTGGCTTAAGAGTGTGAGTTACCATTTTTCCTTACAACCTCCTTC
CTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCACTACCCCAGTCCAAGGAGCTCTGGGAG
CTGTGTAAGCTGTGTTCTCTGCGATGCCATCTGGGCTTTGCAGAGAAGGGAGAATTCAGGGCAC
ACACAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGATGCCGGACATGGATTTATATATA
AATATATATATATAAATATATATATATACCTGCTCATCACGGCCATCTTTGTTGTAACCATTTC
TGTGTTTATAAATGCATTATCTCTGAGAATTTTCATATTGATGTTTTATTTTTGTCTTATTTTT
TTTTTCTCCACCTTGTCCTCTGGCCATGGCATTTTAATTTTCTTTTCCCTTTCAATTTTTTTAA
TCATGGGAAATTTCAGATAAAAGAAAATTAAAATAATCAGGAATTATACAGTTGTTATAAAGCA
ATTTAAAAATGAAAAACTTATGTACAAACTAAGGGGTGTTTTTAGAACATTGTACAGAAATAAA
TTTGTGTTTAAGGATGAGA

hide sequence

RefSeq Acc Id:

XM_017592415 ⟹ XP_017447904

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,497,074 - 159,525,769 (+)	NCBI
mRatBN7.2	4	157,810,867 - 157,840,052 (+)	NCBI
Rnor_6.0	4	157,523,648 - 157,552,606 (+)	NCBI

Sequence:

show sequence

GTGTCTGTCCCGGAACCGGAAGTGGTTGTGGAGGAGCGGGCGATGAGGAGGAATGGGGGGGCTT
AGGGGGCGGGTGCCTGTTTGGTGGGTGGCAGAGTTCAGCTCCCTGGAGGGGTGAAGGAGGGACG
TCCCAAAGACCGGTCTTTGAGGAAGGAGTGGGACTTGACATCGGAAGGACCCAGTTCGGTGTCT
CAGGGGAGCGAAGGTTTTAGGGGGCCAGCTGGGAGTCTCCAGTATATAGACCACTGAAGGTTGA
AGGAGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAAGACGACAGGAGGAAGAGAGAGAGAG
GGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCACGGTCT
CAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGAAGGATCAGCTGTTGCCAGAGAAGGG
CTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGACAGTGCCTGCCTCAGTGTCCCTGTCC
TCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCACACAGTCAGGCATCTG
TTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAGGACTCATGACTGCGGGAGTCTCCTG
TTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGGTAATCACATCCCCT
TCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACTTTCCCTATCTCGACTCCCATGATTG
TCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGGTCCCTGACCTCTCCAAGAAGGTAGC
ATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCACTGTGGCTCCTCCTAAA
CCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCAGGGCTTCCTGAGATGAATGACCCTT
ACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAGATGGCAAGACCTACAGGAGCGAAGG
GAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACG
AACTTGCTGTGTGACCCTGGGTGCCGGATGTGCTCACTGACCTTCTACTCAAAGTCGGAGATGC
AGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACAAGTGCCCACACTGCTCCAAGACCTT
CGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATCCATTCAGGGGCCAAGCCCTATAGTTGT
AACTTTTGTGAGAAATCCTTCCGTCAGCTCTCACACCTGCAGCAGCACACCCGGATTCACTCCA
AGATGCACACGGAGACCATCAAGCCCCACAAGTGCCCGCACTGCTCCAAGACCTTCGCCAACAC
CTCCTACCTGGCCCAGCACCTCCGTATCCACTCGGGGGCCAAGCCCTACAACTGTTCCTACTGC
CAGAAGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGCACACACGAATCCACACTGGCGATAGAC
CATACAAATGTGCACACCCGGGCTGCGAGAAGGCTTTCACACAACTCTCCAACCTGCAGTCTCA
CAGACGGCAGCACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCACCGAGCATACACAGAC
GCAGCCTCACTAGAGGCTCATTTATCTACACACACAGTGAAGCACGCCAAGGTTTATACCTGCA
CAATCTGTAGTCGGGCATATACATCAGAAACATATCTTATGAAACATATGCGCAAACACAACCC
TCCTGATCTCCAACAACAAGTGCAAGCGGCGGCAGCGGCAGCGGCAGTGGCCCAGGCTCAGGCC
CAGGCTCAGGCTCAGGCCCAGGCCCAGGCTCAGGCCCAGGCCCAGGCCCAGGCTCAGGCTCAGG
CCCAGGCCCAAGCTTCACAGGCATCACAGCAGCAGCAACAGCAGCAGCCACCACCTCCACAACC
ACCACACTTCCAGTCTCCTGGGGCAGCTCCCCAGGGAGGGGGTGGTGGGGACAGCAACCAGAAC
CCTCCACCCCAGTGTTCCTTTGACCTGACCCCCTATAAGCCGGCAGAGCATCATAAAGACATCT
GCCTCACTGTCACCACCAGCACCATCCAGGTGGAACACCTGGCCAGCTCTTAGAGATCCGTACT
GCCATCCATTGGAAAGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
TCTCTTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTTCGCA
AGATAACCATCCTTAATCTCAGCTGCTCCTGATTGGCCAAGGAATCCTGAGCTGATAGTGTTAT
CCAACAGCCCCCATCCAAGCAGAGCTTTTAAAACTGGGGCTTGGTGCTTGAGAGAAGGATCCGC
TGTAACCTCACATCTTGTCCAGTGTGTGGGCGATTACCTTTCTCTCCATCCTCAAAGTTGGGGC
TGATAGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCTCTAAATGTCGCCAGCC
TTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCACGTGGCCTGATCCCTGTGAGCCATT
TTCTTCCCCTTACATGGTCTCACTTCATATTGGGTGGTGACTATACCTTTTTTATTTGTAAGGG
GGGCAATAGCTGATACATGGTCACCAAGGTGCCAGAGATTCCCCAGGTGACCAACGGTGGCTTA
AGAGTGTGAGTTACCATTTTTCCTTACAACCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATA
CTCAGTCTCACTACCCCAGTCCAAGGAGCTCTGGGAGCTGTGTAAGCTGTGTTCTCTGCGATGC
CATCTGGGCTTTGCAGAGAAGGGAGAATTCAGGGCACACACAGGACTGGACTTAGCCTCCCTAG
GTGCCACGGTCAGATGCCGGACATGGATTTATATATAAATATATATATATAAATATATATATAT
ACCTGCTCATCACGGCCATCTTTGTTGTAACCATTTCTGTGTTTATAAATGCATTATCTCTGAG
AATTTTCATATTGATGTTTTATTTTTGTCTTATTTTTTTTTTCTCCACCTTGTCCTCTGGCCAT
GGCATTTTAATTTTCTTTTCCCTTTCAATTTTTTTAATCATGGGAAATTTCAGATAAAAGAAAA
TTAAAATAATCAGGAATTATACAGTTGTTATAAAGCAATTTAAAAATGAAAAACTTATGTACAA
ACTAAGGGGTGTTTTTAGAACATTGTACAGAAATAAATTTGTGTTTAAGGATGAGA

hide sequence

RefSeq Acc Id:

XM_017592416 ⟹ XP_017447905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,498 - 159,525,769 (+)	NCBI
mRatBN7.2	4	157,810,263 - 157,840,052 (+)	NCBI
Rnor_6.0	4	157,523,083 - 157,552,606 (+)	NCBI

Sequence:

show sequence

CGGTCTCTGAACTCTTTCCCCCCCCCTTTCCTGCTGCCGCCCTCCCACCGCTATTTTCCTCCCT
CCCCCGCCCCCTTTTCGTTTCCGGCTCTCCCGCCTTCTCCGCAAAACGACTGCTCATTGAGGCT
ATTGGGGAGGGGGCGGGGAGGAAAAGTGGGCGTGGAGGAATTGGGGTTCCCGGGAGCACGAGCC
GCAGCACCACTTCCGGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAAGACGACAGGAGGAA
GAGAGAGAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTAT
CCCCACGGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGAAGGATCAGCTGTTG
CCAGAGAAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGACAGTGCCTGCCTCAG
TGTCCCTGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCACACAG
TCAGGCATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAGGACTCATGACTGCG
GGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGGTAA
TCACATCCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACTTTCCCTATCTCGAC
TCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGGTCCCTGACCTCTCC
AAGAAGGTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCACTGTGG
CTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCAGGGCTTCCTGAGAT
GAATGACCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAGATGGCAAGACCTAC
AGGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCG
GCTCCACCACGAACTTGCTGTGTGACCCTGGGTGCCGGATGTGCTCACTGACCTTCTACTCAAA
GTCGGAGATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACAAGTGCCCACACTGC
TCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATCCATTCAGGGGCCAAGC
CCTATAGTTGTAACTTTTGTGAGAAATCCTTCCGTCAGCTCTCACACCTGCAGCAGCACACCCG
GATTCACTCCAAGATGCACACGGAGACCATCAAGCCCCACAAGTGCCCGCACTGCTCCAAGACC
TTCGCCAACACCTCCTACCTGGCCCAGCACCTCCGTATCCACTCGGGGGCCAAGCCCTACAACT
GTTCCTACTGCCAGAAGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGCACACACGAATCCACAC
TGGCGATAGACCATACAAATGTGCACACCCGGGCTGCGAGAAGGCTTTCACACAACTCTCCAAC
CTGCAGTCTCACAGACGGCAGCACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCACCGAG
CATACACAGACGCAGCCTCACTAGAGGCTCATTTATCTACACACACAGTGAAGCACGCCAAGGT
TTATACCTGCACAATCTGTAGTCGGGCATATACATCAGAAACATATCTTATGAAACATATGCGC
AAACACAACCCTCCTGATCTCCAACAACAAGTGCAAGCGGCGGCAGCGGCAGCGGCAGTGGCCC
AGGCTCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAGGCTCAGGCCCAGGCCCAGGCCCAGGC
TCAGGCTCAGGCCCAGGCCCAAGCTTCACAGGCATCACAGCAGCAGCAACAGCAGCAGCCACCA
CCTCCACAACCACCACACTTCCAGTCTCCTGGGGCAGCTCCCCAGGGAGGGGGTGGTGGGGACA
GCAACCAGAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCCTATAAGCCGGCAGAGCATCA
TAAAGACATCTGCCTCACTGTCACCACCAGCACCATCCAGGTGGAACACCTGGCCAGCTCTTAG
AGATCCGTACTGCCATCCATTGGAAAGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTT
GGTGGGAAAGTTCTCTTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGC
TTTTCTTCGCAAGATAACCATCCTTAATCTCAGCTGCTCCTGATTGGCCAAGGAATCCTGAGCT
GATAGTGTTATCCAACAGCCCCCATCCAAGCAGAGCTTTTAAAACTGGGGCTTGGTGCTTGAGA
GAAGGATCCGCTGTAACCTCACATCTTGTCCAGTGTGTGGGCGATTACCTTTCTCTCCATCCTC
AAAGTTGGGGCTGATAGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCTCTAAA
TGTCGCCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCACGTGGCCTGATCCC
TGTGAGCCATTTTCTTCCCCTTACATGGTCTCACTTCATATTGGGTGGTGACTATACCTTTTTT
ATTTGTAAGGGGGGCAATAGCTGATACATGGTCACCAAGGTGCCAGAGATTCCCCAGGTGACCA
ACGGTGGCTTAAGAGTGTGAGTTACCATTTTTCCTTACAACCTCCTTCCTTCTCTGCCAACCAA
GGGCCTATATACTCAGTCTCACTACCCCAGTCCAAGGAGCTCTGGGAGCTGTGTAAGCTGTGTT
CTCTGCGATGCCATCTGGGCTTTGCAGAGAAGGGAGAATTCAGGGCACACACAGGACTGGACTT
AGCCTCCCTAGGTGCCACGGTCAGATGCCGGACATGGATTTATATATAAATATATATATATAAA
TATATATATATACCTGCTCATCACGGCCATCTTTGTTGTAACCATTTCTGTGTTTATAAATGCA
TTATCTCTGAGAATTTTCATATTGATGTTTTATTTTTGTCTTATTTTTTTTTTCTCCACCTTGT
CCTCTGGCCATGGCATTTTAATTTTCTTTTCCCTTTCAATTTTTTTAATCATGGGAAATTTCAG
ATAAAAGAAAATTAAAATAATCAGGAATTATACAGTTGTTATAAAGCAATTTAAAAATGAAAAA
CTTATGTACAAACTAAGGGGTGTTTTTAGAACATTGTACAGAAATAAATTTGTGTTTAAGGATG
AGA

hide sequence

RefSeq Acc Id:

XM_017592417 ⟹ XP_017447906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,497,085 - 159,525,769 (+)	NCBI
mRatBN7.2	4	157,810,866 - 157,840,052 (+)	NCBI
Rnor_6.0	4	157,523,648 - 157,552,606 (+)	NCBI

Sequence:

show sequence

GTGTCTGTCCCGGAACCGGAAGTGGTTGTGGAGGAGCGGGCGATGAGGAGGAATGGGGGGGCTT
AGGGGGCGGGTGCCTGTTTGGTGGGTGGCAGAGTTCAGCTCCCTGGAGGGGTGAAGGAGGGACG
TCCCAAAGACCGGTCTTTGAGGAAGGAGTGGGACTTGACATCGGAAGGACCCAGTTCGGTGTCT
CAGGGGAGCGAAGGTTTTAGGGGGCCAGCTGGGAGTCTCCAGTATATAGACCACTGAAGGTTGA
AGGAGGTACTTCTTGGCACAAGGCCTTGGAAAGTTCAGGAGCCCTGGAAAGGAGAAGGAATAAG
ACGACAGGAGGAAGAGAGAGAGAGGGGAGAATGGAAGAGTCTCACTTCAATTCTAACCCGTACT
TCTGGCCTTCTATCCCCACGGTCTCAGGGCAGATTGAAAACACTATGTTCATCAACAAGATGAA
GGATCAGCTGTTGCCAGAGAAGGGCTGTGGACTGGCACCACCTCACTATCCCACTTTGCTGACA
GTGCCTGCCTCAGTGTCCCTGTCCTCTGGCATCAGCATGGACACAGAGTCCAAGTCAGAACAGC
TGACCCCACACAGTCAGGCATCTGTTACCCAGAACATCACAGTGGTCCCTGTACCATCTACAGG
ACTCATGACTGCGGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAGGGGT
CCTGGTTTGGTAATCACATCCCCTTCAGGCTCTCTTGTGACCACAGCCTCATCAGCTCAGACTT
TCCCTATCTCGACTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTACAGGTGGT
CCCTGACCTCTCCAAGAAGGTAGCATCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTGGTGGA
GGTGGCACTGTGGCTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAATCAG
GGCTTCCTGAGATGAATGACCCTTACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAGA
TGGCAAGACCTACAGGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATG
GATTCAGTTCCCGGCTCCACCACGAACTTGCTGTGTGACCCTGGGTGCCGGATGTGCTCACTGA
CCTTCTACTCAAAGTCGGAGATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACAA
GTGCCCACACTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATCCAT
TCAGGGGCCAAGCCCTATAGTTGTAACTTTTGTGAGAAATCCTTCCGTCAGCTCTCACACCTGC
AGCAGCACACCCGGATTCACTCCAAGATGCACACGGAGACCATCAAGCCCCACAAGTGCCCGCA
CTGCTCCAAGACCTTCGCCAACACCTCCTACCTGGCCCAGCACCTCCGTATCCACTCGGGGGCC
AAGCCCTACAACTGTTCCTACTGCCAGAAGGCCTTCCGCCAGCTCTCCCACCTCCAGCAGCACA
CACGAATCCACACTGGCGATAGACCATACAAATGTGCACACCCGGGCTGCGAGAAGGCTTTCAC
ACAACTCTCCAACCTGCAGTCTCACAGACGGCAGCACAACAAAGATAAACCCTTCAAGTGCCAC
AACTGTCACCGAGCATACACAGACGCAGCCTCACTAGAGGCTCATTTATCTACACACACAGTGA
AGCACGCCAAGGTTTATACCTGCACAATCTGTAGTCGGGCATATACATCAGAAACATATCTTAT
GAAACATATGCGCAAACACAACCCTCCTGATCTCCAACAACAAGTGCAAGCGGCGGCAGCGGCA
GCGGCAGTGGCCCAGGCTCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAGGCTCAGGCCCAGG
CCCAGGCCCAGGCTCAGGCTCAGGCCCAGGCCCAAGCTTCACAGGCATCACAGCAGCAGCAACA
GCAGCAGCCACCACCTCCACAACCACCACACTTCCAGTCTCCTGGGGCAGCTCCCCAGGGAGGG
GGTGGTGGGGACAGCAACCAGAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCCTATAAGC
CGGCAGAGCATCATAAAGACATCTGCCTCACTGTCACCACCAGCACCATCCAGGTGGAACACCT
GGCCAGCTCTTAGAGATCCGTACTGCCATCCATTGGAAAGGGGAGAAGTCCTGGTCCCTCCTTT
GTCAACTCTTCTTGGTGGGAAAGTTCTCTTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGG
TCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTAATCTCAGCTGCTCCTGATTGGCCAA
GGAATCCTGAGCTGATAGTGTTATCCAACAGCCCCCATCCAAGCAGAGCTTTTAAAACTGGGGC
TTGGTGCTTGAGAGAAGGATCCGCTGTAACCTCACATCTTGTCCAGTGTGTGGGCGATTACCTT
TCTCTCCATCCTCAAAGTTGGGGCTGATAGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGA
AGGAAGCTCTAAATGTCGCCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCAC
GTGGCCTGATCCCTGTGAGCCATTTTCTTCCCCTTACATGGTCTCACTTCATATTGGGTGGTGA
CTATACCTTTTTTATTTGTAAGGGGGGCAATAGCTGATACATGGTCACCAAGGTGCCAGAGATT
CCCCAGGTGACCAACGGTGGCTTAAGAGTGTGAGTTACCATTTTTCCTTACAACCTCCTTCCTT
CTCTGCCAACCAAGGGCCTATATACTCAGTCTCACTACCCCAGTCCAAGGAGCTCTGGGAGCTG
TGTAAGCTGTGTTCTCTGCGATGCCATCTGGGCTTTGCAGAGAAGGGAGAATTCAGGGCACACA
CAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGATGCCGGACATGGATTTATATATAAAT
ATATATATATAAATATATATATATACCTGCTCATCACGGCCATCTTTGTTGTAACCATTTCTGT
GTTTATAAATGCATTATCTCTGAGAATTTTCATATTGATGTTTTATTTTTGTCTTATTTTTTTT
TTCTCCACCTTGTCCTCTGGCCATGGCATTTTAATTTTCTTTTCCCTTTCAATTTTTTTAATCA
TGGGAAATTTCAGATAAAAGAAAATTAAAATAATCAGGAATTATACAGTTGTTATAAAGCAATT
TAAAAATGAAAAACTTATGTACAAACTAAGGGGTGTTTTTAGAACATTGTACAGAAATAAATTT
GTGTTTAAGGATGAGA

hide sequence

RefSeq Acc Id:

XM_039106974 ⟹ XP_038962902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,512,136 - 159,525,769 (+)	NCBI
mRatBN7.2	4	157,825,890 - 157,840,052 (+)	NCBI

RefSeq Acc Id:

XM_063285446 ⟹ XP_063141516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285447 ⟹ XP_063141517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,481 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285448 ⟹ XP_063141518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285449 ⟹ XP_063141519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,497,106 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285450 ⟹ XP_063141520

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,510 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285451 ⟹ XP_063141521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,692 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285452 ⟹ XP_063141522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285453 ⟹ XP_063141523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285454 ⟹ XP_063141524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,692 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285455 ⟹ XP_063141525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,525,769 (+)	NCBI

RefSeq Acc Id:

XM_063285456 ⟹ XP_063141526

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	159,496,706 - 159,519,395 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001030002	(Get FASTA)	NCBI Sequence Viewer
	NP_001030003	(Get FASTA)	NCBI Sequence Viewer
	NP_596920	(Get FASTA)	NCBI Sequence Viewer
	XP_006237389	(Get FASTA)	NCBI Sequence Viewer
	XP_017447902	(Get FASTA)	NCBI Sequence Viewer
	XP_017447904	(Get FASTA)	NCBI Sequence Viewer
	XP_017447905	(Get FASTA)	NCBI Sequence Viewer
	XP_017447906	(Get FASTA)	NCBI Sequence Viewer
	XP_038962902	(Get FASTA)	NCBI Sequence Viewer
	XP_063141516	(Get FASTA)	NCBI Sequence Viewer
	XP_063141517	(Get FASTA)	NCBI Sequence Viewer
	XP_063141518	(Get FASTA)	NCBI Sequence Viewer
	XP_063141519	(Get FASTA)	NCBI Sequence Viewer
	XP_063141520	(Get FASTA)	NCBI Sequence Viewer
	XP_063141521	(Get FASTA)	NCBI Sequence Viewer
	XP_063141522	(Get FASTA)	NCBI Sequence Viewer
	XP_063141523	(Get FASTA)	NCBI Sequence Viewer
	XP_063141524	(Get FASTA)	NCBI Sequence Viewer
	XP_063141525	(Get FASTA)	NCBI Sequence Viewer
	XP_063141526	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG40582	(Get FASTA)	NCBI Sequence Viewer
	AAG40583	(Get FASTA)	NCBI Sequence Viewer
	AAG40584	(Get FASTA)	NCBI Sequence Viewer
	AAG40585	(Get FASTA)	NCBI Sequence Viewer
	BAA89664	(Get FASTA)	NCBI Sequence Viewer
	EDM01887	(Get FASTA)	NCBI Sequence Viewer
	EDM01888	(Get FASTA)	NCBI Sequence Viewer
	EDM01889	(Get FASTA)	NCBI Sequence Viewer
	EDM01890	(Get FASTA)	NCBI Sequence Viewer
	EDM01891	(Get FASTA)	NCBI Sequence Viewer
	EDM01892	(Get FASTA)	NCBI Sequence Viewer
	EDM01893	(Get FASTA)	NCBI Sequence Viewer
	EDM01894	(Get FASTA)	NCBI Sequence Viewer
	EDM01895	(Get FASTA)	NCBI Sequence Viewer
	EDM01896	(Get FASTA)	NCBI Sequence Viewer
	EDM01897	(Get FASTA)	NCBI Sequence Viewer
	EDM01898	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000023192
	ENSRNOP00000023242
	ENSRNOP00000037592
	ENSRNOP00000052839
GenBank Protein	Q9EQJ4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_596920 ⟸ NM_133429
- Peptide Label:	isoform 1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), A0A8J8XAE9 (UniProtKB/TrEMBL), A6ILP2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKP HKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKC PHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDRPYKCAHPGCEKA FTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEAHLSTHTVKHAKVYTCTICSRAYTSETY LMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQASQQQ QQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPPPQCSFDLTPYKPAEHHKDICLTVTTSTIQVE HLASS hide sequence

RefSeq Acc Id:	NP_001030002 ⟸ NM_001034830
- Peptide Label:	isoform 1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), A0A8J8XAE9 (UniProtKB/TrEMBL), A6ILP2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKP HKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKC PHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDRPYKCAHPGCEKA FTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEAHLSTHTVKHAKVYTCTICSRAYTSETY LMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQASQQQ QQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPPPQCSFDLTPYKPAEHHKDICLTVTTSTIQVE HLASS hide sequence

RefSeq Acc Id:	NP_001030003 ⟸ NM_001034831
- Peptide Label:	isoform 2
- UniProtKB:	A6ILP4 (UniProtKB/TrEMBL), A0A0G2K403 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKP HKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHTGDRPYKCAHPGC EKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEAHLSTHTVKHAKVYTCTICSRAYTS ETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQAS QQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPPPQCSFDLTPYKPAEHHKDICLTVTTSTI QVEHLASS hide sequence

RefSeq Acc Id:	XP_006237389 ⟸ XM_006237327
- Peptide Label:	isoform X1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D3ZWX3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRSEGNCGTGNGQSLGLMDSVPGSTTNL LCDPGCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNF CEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQK AFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAA SLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQA QAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPP PQCSFDLTPYKPAEHHKDICLTVTTSTIQVEHLASS hide sequence

RefSeq Acc Id:	XP_017447902 ⟸ XM_017592413
- Peptide Label:	isoform X1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D3ZWX3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRSEGNCGTGNGQSLGLMDSVPGSTTNL LCDPGCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNF CEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQK AFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAA SLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQA QAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPP PQCSFDLTPYKPAEHHKDICLTVTTSTIQVEHLASS hide sequence

RefSeq Acc Id:	XP_017447905 ⟸ XM_017592416
- Peptide Label:	isoform X1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D3ZWX3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRSEGNCGTGNGQSLGLMDSVPGSTTNL LCDPGCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNF CEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQK AFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAA SLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQA QAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPP PQCSFDLTPYKPAEHHKDICLTVTTSTIQVEHLASS hide sequence

RefSeq Acc Id:	XP_017447906 ⟸ XM_017592417
- Peptide Label:	isoform X1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D3ZWX3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRSEGNCGTGNGQSLGLMDSVPGSTTNL LCDPGCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNF CEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQK AFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAA SLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQA QAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPP PQCSFDLTPYKPAEHHKDICLTVTTSTIQVEHLASS hide sequence

RefSeq Acc Id:	XP_017447904 ⟸ XM_017592415
- Peptide Label:	isoform X1
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D3ZWX3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLSSG ISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSG SLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGTVAPPKPP RGRKKKRMLESGLPEMNDPYVLAPGDDDDHQKDGKTYRSEGNCGTGNGQSLGLMDSVPGSTTNL LCDPGCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNF CEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQK AFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAA SLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQA QAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPP PQCSFDLTPYKPAEHHKDICLTVTTSTIQVEHLASS hide sequence

Ensembl Acc Id:

ENSRNOP00000037592 ⟸ ENSRNOT00000036654

Ensembl Acc Id:

ENSRNOP00000052839 ⟸ ENSRNOT00000055985

Ensembl Acc Id:

ENSRNOP00000072846 ⟸ ENSRNOT00000081640

Ensembl Acc Id:

ENSRNOP00000074298 ⟸ ENSRNOT00000086418

Ensembl Acc Id:

ENSRNOP00000023242 ⟸ ENSRNOT00000023240

Ensembl Acc Id:

ENSRNOP00000023192 ⟸ ENSRNOT00000023192

RefSeq Acc Id:	XP_038962902 ⟸ XM_039106974
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063141517 ⟸ XM_063285447
- Peptide Label:	isoform X3
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), A0A8J8XAE9 (UniProtKB/TrEMBL), A6ILP2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141520 ⟸ XM_063285450
- Peptide Label:	isoform X5
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D4A6Z1 (UniProtKB/TrEMBL), G3V9M5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141521 ⟸ XM_063285451
- Peptide Label:	isoform X5
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D4A6Z1 (UniProtKB/TrEMBL), G3V9M5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141524 ⟸ XM_063285454
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K403 (UniProtKB/TrEMBL), A6ILP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141523 ⟸ XM_063285453
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K403 (UniProtKB/TrEMBL), A6ILP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141522 ⟸ XM_063285452
- Peptide Label:	isoform X6
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063141516 ⟸ XM_063285446
- Peptide Label:	isoform X2
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063141518 ⟸ XM_063285448
- Peptide Label:	isoform X4
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), A6ILP5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141525 ⟸ XM_063285455
- Peptide Label:	isoform X8
- UniProtKB:	A0A0G2K403 (UniProtKB/TrEMBL), G3V883 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063141526 ⟸ XM_063285456
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063141519 ⟸ XM_063285449
- Peptide Label:	isoform X5
- UniProtKB:	Q9JMJ5 (UniProtKB/Swiss-Prot), Q9EQJ4 (UniProtKB/Swiss-Prot), Q9EQJ3 (UniProtKB/Swiss-Prot), Q9EQJ2 (UniProtKB/Swiss-Prot), D4A6Z1 (UniProtKB/TrEMBL), G3V9M5 (UniProtKB/TrEMBL)

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9EQJ4-F1-model_v2	AlphaFold	Q9EQJ4	1-579	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693399

Promoter ID:

EPDNEW_R3924

Type:

initiation region

Name:

Zfp384_1

Description:

zinc finger protein 384

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R3925

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	157,523,283 - 157,523,343	EPDNEW

RGD ID:

13693400

Promoter ID:

EPDNEW_R3925

Type:

multiple initiation site

Name:

Zfp384_2

Description:

zinc finger protein 384

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R3924

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	157,523,738 - 157,523,798	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:708346	AgrOrtholog
BioCyc Gene	G2FUF-43041	BioCyc
Ensembl Genes	ENSRNOG00000017066	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000023192	ENTREZGENE
	ENSRNOT00000023240	ENTREZGENE
	ENSRNOT00000036654	ENTREZGENE
	ENSRNOT00000055985	ENTREZGENE
Gene3D-CATH	Classic Zinc Finger	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7192843	IMAGE-MGC_LOAD
InterPro	Znf_C2H2_sf	UniProtKB/Swiss-Prot
	Znf_C2H2_type	UniProtKB/Swiss-Prot
KEGG Report	rno:171018	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93223	IMAGE-MGC_LOAD
NCBI Gene	171018	ENTREZGENE
PANTHER	BLOODY FINGERS-RELATED	UniProtKB/Swiss-Prot
	KRAB AND ZINC FINGER DOMAIN-CONTAINING	UniProtKB/Swiss-Prot
Pfam	zf-C2H2	UniProtKB/Swiss-Prot
	zf-C2H2_6	UniProtKB/Swiss-Prot
PhenoGen	Zfp384	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/Swiss-Prot
	ZINC_FINGER_C2H2_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000017066	RatGTEx
SMART	ZnF_C2H2	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF57667	UniProtKB/Swiss-Prot
UniProt	A0A0G2K403	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K7Q3_RAT	UniProtKB/TrEMBL
	A0A8J8XAE9	ENTREZGENE, UniProtKB/TrEMBL
	A6ILP2	ENTREZGENE, UniProtKB/TrEMBL
	A6ILP4	ENTREZGENE, UniProtKB/TrEMBL
	A6ILP5	ENTREZGENE, UniProtKB/TrEMBL
	A6ILP9_RAT	UniProtKB/TrEMBL
	D3ZWX3	ENTREZGENE, UniProtKB/TrEMBL
	D4A6Z1	ENTREZGENE
	G3V883	ENTREZGENE, UniProtKB/TrEMBL
	G3V9M5	ENTREZGENE, UniProtKB/TrEMBL
	Q9EQJ1_RAT	UniProtKB/TrEMBL
	Q9EQJ2	ENTREZGENE
	Q9EQJ3	ENTREZGENE
	Q9EQJ4	ENTREZGENE
	Q9JMJ5	ENTREZGENE
	ZN384_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	Q9EQJ2	UniProtKB/Swiss-Prot
	Q9EQJ3	UniProtKB/Swiss-Prot
	Q9JMJ5	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-11-17	Zfp384	zinc finger protein 384			Symbol updated	1299863	APPROVED
2004-09-10	Znf384	zinc finger protein 384	Ciz	Cas-associated zinc finger protein	Symbol and Name updated	1299863	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_physical_interaction	binds the SH3 domain of docking protein p130 Cas	1299391

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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