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Gene: Akap6 (A-kinase anchoring protein 6) Rattus norvegicus

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Symbol:

Akap6

Name:

A-kinase anchoring protein 6

RGD ID:

69412

Description:

Enables several functions, including enzyme binding activity; protein kinase A regulatory subunit binding activity; and transmembrane transporter binding activity. Involved in several processes, including regulation of intracellular signal transduction; regulation of muscle system process; and regulation of release of sequestered calcium ion into cytosol. Located in several cellular components, including T-tubule; intercalated disc; and junctional sarcoplasmic reticulum membrane. Part of protein-containing complex. Human ortholog(s) of this gene implicated in anorexia nervosa and ovary epithelial cancer. Orthologous to human AKAP6 (A-kinase anchoring protein 6); PARTICIPATES IN protein kinase A (PKA) signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

A kinase (PRKA) anchor protein 6; A-kinase anchor protein; A-kinase anchor protein 6; AKAP-6; mAkap; PRKA6; protein kinase A-anchoring protein 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AKAP6 (A-kinase anchoring protein 6)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Akap6 (A kinase anchor protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Akap6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AKAP6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AKAP6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Akap6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AKAP6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AKAP6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Akap6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Akap6 (A-kinase anchoring protein 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	AKAP6 (A-kinase anchoring protein 6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Akap6 (A kinase anchor protein 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	akap6 (A kinase (PRKA) anchor protein 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	best3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	akap6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	akap6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	75,919,350 - 76,359,667 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	75,919,513 - 76,355,036 (+)	Ensembl				GRCr8
mRatBN7.2	6	70,184,101 - 70,624,369 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	70,184,175 - 70,619,738 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	70,602,131 - 71,041,292 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	70,908,778 - 71,347,917 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	70,348,346 - 70,787,478 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	73,553,111 - 73,991,992 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	73,553,210 - 73,990,534 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	83,111,409 - 83,547,031 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	73,010,779 - 73,354,520 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	69,046,483 - 69,480,156 (+)	NCBI		Celera
RGSC_v3.1	6	73,016,484 - 73,357,646 (+)	NCBI
Cytogenetic Map	6	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

anorexia nervosa (ISO)

atrial fibrillation (ISO)

congestive heart failure (ISO)

Duchenne muscular dystrophy (ISO)

hypertrophic cardiomyopathy (ISO)

ovary epithelial cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,6-trinitrobenzenesulfonic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

acrylamide (EXP)

Aflatoxin B2 alpha (ISO)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP,ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

Cuprizon (EXP)

curcumin (ISO)

cycloheximide (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

genistein (EXP)

gentamycin (EXP)

graphite (EXP)

lead(0) (ISO)

lipopolysaccharide (ISO)

methoxychlor (EXP)

N,N-diethyl-m-toluamide (EXP)

N-Nitrosopyrrolidine (ISO)

nitrofen (EXP)

O-methyleugenol (ISO)

okadaic acid (ISO)

paracetamol (EXP)

perfluorohexanesulfonic acid (ISO)

perfluorooctanoic acid (EXP)

permethrin (EXP)

pirinixic acid (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triclosan (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

action potential (IEA,ISO)

cAMP/PKA signal transduction (IMP)

cellular response to cAMP (IEA,ISO)

cellular response to cytokine stimulus (IMP)

cellular response to epinephrine stimulus (IMP)

negative regulation of adenylate cyclase activity (IMP)

positive regulation of calcineurin-NFAT signaling cascade (IMP)

positive regulation of cation transmembrane transport (IEA)

positive regulation of cell growth (IMP)

positive regulation of cell growth involved in cardiac muscle cell development (IDA,IMP)

positive regulation of potassium ion transmembrane transport (IEA,ISO)

positive regulation of release of sequestered calcium ion into cytosol (IMP)

positive regulation of translation (IMP)

protein-containing complex localization (IMP)

regulation of cAMP/PKA signal transduction (IDA)

regulation of cardiac muscle cell contraction (IMP)

regulation of membrane repolarization (IBA,IEA,ISO)

regulation of metal ion transport (IEA)

regulation of relaxation of cardiac muscle (IBA,IMP)

regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (IBA,IMP)

Cellular Component

calcium channel complex (IEA,ISO)

caveola (IDA)

cytoplasm (IDA)

intercalated disc (IDA)

junctional sarcoplasmic reticulum membrane (IDA)

membrane (IEA)

nuclear envelope (IDA,IEA,ISO)

nuclear membrane (IBA,IDA,IEA,ISO)

nucleus (IDA)

perinuclear region of cytoplasm (IDA,IEA,ISO)

protein-containing complex (IDA,IEA)

sarcolemma (IDA)

sarcoplasmic reticulum (IBA,IDA,IEA,ISO)

T-tubule (IDA)

Molecular Function

adenylate cyclase binding (IDA)

cytoskeleton-nuclear membrane anchor activity (IBA)

enzyme binding (IPI)

molecular adaptor activity (IDA)

protein binding (IPI,ISO)

protein kinase A binding (IDA)

protein kinase A regulatory subunit binding (IDA)

protein phosphatase 2A binding (IDA)

protein-membrane adaptor activity (IDA)

transmembrane transporter binding (IDA,IEA,IPI,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

protein kinase A (PKA) signaling pathway (IMP,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	alpha1-adrenoceptors regulate only the caveolae-located subpopulation of cardiac K(V)4 channels.	Alday A, etal., Channels (Austin). 2010 May-Jun;4(3):168-78.
2.	PKA-phosphorylation of PDE4D3 facilitates recruitment of the mAKAP signalling complex.	Carlisle Michel JJ, etal., Biochem J. 2004 Aug 1;381(Pt 3):587-92.
3.	A-kinase anchoring proteins: from protein complexes to physiology and disease.	Carnegie GK, etal., IUBMB Life. 2009 Apr;61(4):394-406.
4.	mAKAP assembles a protein kinase A/PDE4 phosphodiesterase cAMP signaling module.	Dodge KL, etal., EMBO J 2001 Apr 17;20(8):1921-30.
5.	The protein kinase A anchoring protein mAKAP coordinates two integrated cAMP effector pathways.	Dodge-Kafka KL, etal., Nature. 2005 Sep 22;437(7058):574-8.
6.	Variants in genes encoding small GTPases and association with epithelial ovarian cancer susceptibility.	Earp M, etal., PLoS One. 2018 Jul 6;13(7):e0197561. doi: 10.1371/journal.pone.0197561. eCollection 2018.
7.	AKAP-mediated targeting of protein kinase a regulates contractility in cardiac myocytes.	Fink MA, etal., Circ Res. 2001 Feb 16;88(3):291-7.
8.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
9.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
10.	An adenylyl cyclase-mAKAPbeta signaling complex regulates cAMP levels in cardiac myocytes.	Kapiloff MS, etal., J Biol Chem. 2009 Aug 28;284(35):23540-6. Epub 2009 Jul 1.
11.	mAKAP: an A-kinase anchoring protein targeted to the nuclear membrane of differentiated myocytes.	Kapiloff MS, etal., J Cell Sci 1999 Aug;112 ( Pt 16):2725-36.
12.	mAKAP and the ryanodine receptor are part of a multi-component signaling complex on the cardiomyocyte nuclear envelope.	Kapiloff MS, etal., J Cell Sci. 2001 Sep;114(Pt 17):3167-76.
13.	The scaffold protein muscle A-kinase anchoring protein beta orchestrates cardiac myocyte hypertrophic signaling required for the development of heart failure.	Kritzer MD, etal., Circ Heart Fail. 2014 Jul;7(4):663-72. doi: 10.1161/CIRCHEARTFAILURE.114.001266. Epub 2014 May 8.
14.	The mAKAPbeta scaffold regulates cardiac myocyte hypertrophy via recruitment of activated calcineurin.	Li J, etal., J Mol Cell Cardiol. 2010 Feb;48(2):387-94. Epub 2009 Oct 31.
15.	Cloning and characterization of A-kinase anchor protein 100 (AKAP100). A protein that targets A-kinase to the sarcoplasmic reticulum.	McCartney S, etal., J Biol Chem. 1995 Apr 21;270(16):9327-33.
16.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
17.	Nesprin-1alpha contributes to the targeting of mAKAP to the cardiac myocyte nuclear envelope.	Pare GC, etal., Exp Cell Res. 2005 Feb 15;303(2):388-99.
18.	The mAKAP complex participates in the induction of cardiac myocyte hypertrophy by adrenergic receptor signaling.	Pare GC, etal., J Cell Sci. 2005 Dec 1;118(Pt 23):5637-46.
19.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
20.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
21.	Decreased mAKAP, ryanodine receptor, and SERCA2a gene expression in mdx hearts.	Rohman MS, etal., Biochem Biophys Res Commun. 2003 Oct 10;310(1):228-35.
22.	Targeting of protein kinase A by muscle A kinase-anchoring protein (mAKAP) regulates phosphorylation and function of the skeletal muscle ryanodine receptor.	Ruehr ML, etal., J Biol Chem. 2003 Jul 4;278(27):24831-6. Epub 2003 Apr 21.
23.	Association of the type 1 protein phosphatase PP1 with the A-kinase anchoring protein AKAP220.	Schillace RV and Scott JD, Curr Biol. 1999 Mar 25;9(6):321-4.
24.	Localized effects of cAMP mediated by distinct routes of protein kinase A.	Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.
25.	A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa.	Wang K, etal., Mol Psychiatry. 2011 Sep;16(9):949-59. doi: 10.1038/mp.2010.107. Epub 2010 Nov 16.
26.	Epigenetic silencing of AKAP12 in juvenile myelomonocytic leukemia.	Wilhelm T, etal., Epigenetics. 2016;11(2):110-9. doi: 10.1080/15592294.2016.1145327. Epub 2016 Feb 18.
27.	A-kinase anchoring protein 100 (AKAP100) is localized in multiple subcellular compartments in the adult rat heart.	Yang J, etal., J Cell Biol. 1998 Jul 27;142(2):511-22.
28.	Temporal profile of Src, SSeCKS, and angiogenic factors after focal cerebral ischemia: correlations with angiogenesis and cerebral edema.	Zan L, etal., Neurochem Int. 2011 Jul;58(8):872-9. doi: 10.1016/j.neuint.2011.02.014. Epub 2011 Feb 18.
29.	Phospholipase C epsilon scaffolds to muscle-specific A kinase anchoring protein (mAKAPbeta) and integrates multiple hypertrophic stimuli in cardiac myocytes.	Zhang L, etal., J Biol Chem. 2011 Jul 1;286(26):23012-21. Epub 2011 May 5.

Additional References at PubMed

PMID:10830164	PMID:11299204	PMID:20106966	PMID:20164376	PMID:23261540	PMID:25644384	PMID:26844267	PMID:29522762	PMID:29733383	PMID:30523159	PMID:32933333

Genomics

Comparative Map Data

Akap6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	75,919,350 - 76,359,667 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	75,919,513 - 76,355,036 (+)	Ensembl				GRCr8
mRatBN7.2	6	70,184,101 - 70,624,369 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	70,184,175 - 70,619,738 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	70,602,131 - 71,041,292 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	70,908,778 - 71,347,917 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	70,348,346 - 70,787,478 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	73,553,111 - 73,991,992 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	73,553,210 - 73,990,534 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	83,111,409 - 83,547,031 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	73,010,779 - 73,354,520 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	69,046,483 - 69,480,156 (+)	NCBI		Celera
RGSC_v3.1	6	73,016,484 - 73,357,646 (+)	NCBI
Cytogenetic Map	6	q23	NCBI

AKAP6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	32,329,298 - 32,837,684 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	32,329,298 - 32,837,684 (+)	Ensembl			hg38	GRCh38
GRCh37	14	32,798,504 - 33,306,890 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	31,868,274 - 32,372,018 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	31,868,273 - 32,372,018	NCBI
Celera	14	12,665,076 - 13,167,767 (+)	NCBI		Celera
Cytogenetic Map	14	q12	NCBI
HuRef	14	12,916,606 - 13,419,742 (+)	NCBI		HuRef
CHM1_1	14	32,798,120 - 33,300,973 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	26,401,181 - 27,034,449 (+)	NCBI		T2T-CHM13v2.0

Akap6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	52,745,371 - 53,202,351 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	52,746,166 - 53,202,382 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	52,698,588 - 53,155,568 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	52,699,383 - 53,155,599 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	53,800,370 - 54,252,002 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	53,620,875 - 54,072,638 (+)	NCBI		MGSCv36	mm8
Celera	12	54,009,109 - 54,451,716 (+)	NCBI		Celera
Cytogenetic Map	12	C1	NCBI
cM Map	12	22.18	NCBI

Akap6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	28,077,621 - 28,516,944 (-)	Ensembl
ChiLan1.0	NW_004955409	28,067,814 - 28,516,881 (-)	NCBI	ChiLan1.0	ChiLan1.0

AKAP6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	33,530,973 - 34,155,583 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	32,747,476 - 33,372,086 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	12,978,221 - 13,602,732 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	31,290,939 - 31,792,166 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	31,395,026 - 31,792,166 (+)	Ensembl			panPan2	panpan1.1

AKAP6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	11,403,655 - 11,882,684 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	11,406,280 - 11,874,406 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	11,299,751 - 11,679,685 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	11,415,673 - 11,984,846 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	11,508,505 - 11,986,716 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	11,188,259 - 11,668,695 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	11,269,184 - 11,750,344 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	11,547,419 - 12,028,362 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Akap6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	43,239,054 - 43,722,811 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936494	6,744,892 - 7,228,686 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936494	6,744,923 - 7,228,670 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AKAP6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	66,915,881 - 67,375,177 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	66,913,541 - 67,462,147 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	71,765,469 - 72,075,989 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AKAP6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	24	9,035,798 - 9,656,619 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

Akap6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624838	3,999,663 - 4,393,055 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624838	3,992,769 - 4,393,055 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Akap6
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	66,154,586 - 66,546,220 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Akap6
2988 total Variants

miRNA Target Status (No longer updated)

Confirmed Target Of

miRNA Gene	Mature miRNA	Method Name	Result Type	Data Type	Support Type	PMID
Mir26b	rno-miR-26b-5p	Mirtarbase	external_info	Microarray	Functional MTI (Weak)	18258830
Mir543	rno-miR-543-5p	Mirtarbase	external_info	Microarray	Functional MTI (Weak)	18258830

Predicted Target Of

	Summary Value
Count of predictions:	359
Count of miRNA genes:	203
Interacting mature miRNAs:	263
Transcripts:	ENSRNOT00000006562
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9590290	Uminl2	Urine mineral level QTL 2	3.96	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	6	44510974	89510974	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
634307	Bp141	Blood pressure QTL 141	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	40957564	85957564	Rat
1331743	Uae28	Urinary albumin excretion QTL 28	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	45153786	90153786	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
1331779	Rf38	Renal function QTL 38	2.876		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	31185002	76185002	Rat
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
70176	Mcsm1	Mammary carcinoma susceptibility modifier QTL 1			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	64367996	109367996	Rat
1558641	Cm47	Cardiac mass QTL 47	2.9	0.001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	6	63457441	94939581	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	46047353	91047353	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
9590140	Scort4	Serum corticosterone level QTL 4	14.49	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
9590306	Scort18	Serum corticosterone level QTL 18	2.88	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
1578665	Bss16	Bone structure and strength QTL 16	4.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	6	33328841	78328841	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
4889848	Pur25	Proteinuria QTL 25	14	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	63037319	95934232	Rat
1641898	Colcr4	Colorectal carcinoma resistance QTL4	3.71	0.0007	intestine integrity trait (VT:0010554)	well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)	6	30937632	75937632	Rat
1578668	Bmd14	Bone mineral density QTL 14	3.8		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	6	33328841	78328841	Rat
6893340	Cm77	Cardiac mass QTL 77	0.26	0.57	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	39028659	86867923	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
1300143	Rf14	Renal function QTL 14	2.92		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	40163183	85163183	Rat
6893332	Cm74	Cardiac mass QTL 74	0.4	0.64	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	63457441	94939581	Rat

Markers in Region

D6Got90

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	70,277,257 - 70,277,484 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	73,646,974 - 73,647,200	NCBI	Rnor6.0
Rnor_5.0	6	83,203,912 - 83,204,138	UniSTS	Rnor5.0
RGSC_v3.4	6	73,001,677 - 73,001,904	RGD	RGSC3.4
RGSC_v3.4	6	73,001,678 - 73,001,904	UniSTS	RGSC3.4
Celera	6	69,138,427 - 69,138,645	UniSTS
RGSC_v3.1	6	73,004,804 - 73,005,030	RGD
RH 3.4 Map	6	516.5	UniSTS
RH 3.4 Map	6	516.5	RGD
RH 2.0 Map	6	669.7	RGD
Cytogenetic Map	6	q23	UniSTS

D6Got91

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	76,066,011 - 76,066,230 (+)	Marker Load Pipeline
mRatBN7.2	6	70,330,690 - 70,330,909 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	73,700,738 - 73,700,956	NCBI	Rnor6.0
Rnor_5.0	6	83,257,121 - 83,257,339	UniSTS	Rnor5.0
RGSC_v3.4	6	73,057,488 - 73,057,707	RGD	RGSC3.4
RGSC_v3.4	6	73,057,489 - 73,057,707	UniSTS	RGSC3.4
Celera	6	69,191,173 - 69,191,391	UniSTS
RGSC_v3.1	6	73,060,615 - 73,060,833	RGD
RH 3.4 Map	6	516.1	RGD
RH 3.4 Map	6	516.1	UniSTS
RH 2.0 Map	6	675.0	RGD
Cytogenetic Map	6	q23	UniSTS

D6Wox36

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	70,619,431 - 70,619,618 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	73,990,228 - 73,990,414	NCBI	Rnor6.0
Rnor_5.0	6	83,545,270 - 83,545,456	UniSTS	Rnor5.0
RGSC_v3.4	6	73,354,214 - 73,354,400	UniSTS	RGSC3.4
Celera	6	69,479,850 - 69,480,036	UniSTS
Cytogenetic Map	6	q23	UniSTS

AU047448

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	70,307,844 - 70,308,027 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	73,677,678 - 73,677,860	NCBI	Rnor6.0
Rnor_5.0	6	83,234,061 - 83,234,243	UniSTS	Rnor5.0
RGSC_v3.4	6	73,033,955 - 73,034,137	UniSTS	RGSC3.4
Celera	6	69,168,313 - 69,168,497	UniSTS
Cytogenetic Map	6	q23	UniSTS

RH132511

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	76,044,686 - 76,044,879 (+)	Marker Load Pipeline
mRatBN7.2	6	70,309,361 - 70,309,554 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	73,679,195 - 73,679,387	NCBI	Rnor6.0
Rnor_5.0	6	83,235,578 - 83,235,770	UniSTS	Rnor5.0
RGSC_v3.4	6	73,035,472 - 73,035,664	UniSTS	RGSC3.4
Celera	6	69,169,834 - 69,170,026	UniSTS
RH 3.4 Map	6	513.7	UniSTS
Cytogenetic Map	6	q23	UniSTS

BM384496

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	70,305,244 - 70,305,425 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	73,674,987 - 73,675,167	NCBI	Rnor6.0
Rnor_5.0	6	83,231,370 - 83,231,550	UniSTS	Rnor5.0
RGSC_v3.4	6	73,031,355 - 73,031,535	UniSTS	RGSC3.4
Celera	6	69,165,713 - 69,165,893	UniSTS
RH 3.4 Map	6	516.7	UniSTS
Cytogenetic Map	6	q23	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	52	59	6	307	152	11	143	72	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF139518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006562 ⟹ ENSRNOP00000006562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	75,919,513 - 76,355,036 (+)	Ensembl
mRatBN7.2 Ensembl	6	70,184,175 - 70,619,738 (+)	Ensembl
Rnor_6.0 Ensembl	6	73,553,210 - 73,990,534 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111927 ⟹ ENSRNOP00000091441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	75,919,513 - 76,353,420 (+)	Ensembl
mRatBN7.2 Ensembl	6	70,184,175 - 70,618,122 (+)	Ensembl

RefSeq Acc Id:

NM_022618 ⟹ NP_072140

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	75,919,513 - 76,355,036 (+)	NCBI
mRatBN7.2	6	70,184,175 - 70,619,738 (+)	NCBI
Rnor_6.0	6	73,553,210 - 73,990,534 (+)	NCBI
Rnor_5.0	6	83,111,409 - 83,547,031 (+)	NCBI
RGSC_v3.4	6	73,010,779 - 73,354,520 (+)	RGD
Celera	6	69,046,483 - 69,480,156 (+)	RGD

Sequence:

show sequence

GCATCATGCAGCAGGTCAAACAAGGCATCTCCTAGTATTGCATCCTCCAGATGTGCTGTAAACA
TCAAAAGGAGACGCTGGGAGCAGGAGATGCTGTTTTGGAAAGAAGTAAGGCTTAGATTTCTCCA
TGTTAACCATGAGCGTGACACTTTCCCCACTGAGGTCACAGGGCCCAGATCCCATGGCGACGGA
TGCTTCACCCATGGCCATCAACATGACACCCACTGTGGAGCAGGAGGAAGGAGAGGGAGAGGAA
GCCGTGAAGGCCATAGACGCTGAGCAGCAGTATGGAAAGCCACCTCCGCTCCACACAGCAGCCG
ACTGGAAGATTGTCCTGCACTTACCTGAGATTGAGACCTGGCTCCGGATGACCTCAGAGAGGGT
CCGTGACCTGACCTACTCAGTCCAGCAGGATGCAGACAGCAAGCATGTGGATGTGCATCTAGTT
CAGCTGAAGGACATTTGTGAGGATATTTCTGACCATGTGGAGCAGATCCATGCCCTCCTTGAGA
CGGAGTTTTCCCTAAAGCTGCTGTCCTACTCGGTCAACGTCATCGTAGACATCCACGCAGTACA
GCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCCGGGAGCGCATCCTACAAGGTCTG
CAGGACGCCAATGGCAACTACACCAGGCAGACTGACATTCTGCAAGCGTTCTCTGAAGAAACAA
CGGAGGGCCGGCTTGATTCCCTTACAGAAGTGGACGACTCAGGGCAGTTAACTATCAAATGTTC
ACAGGATTACTTGTCTCTGGATTGTGGCATTACCGCATTTGAACTCTCCGACTACAGTCCAAGT
GAGGATCTGCTTGGTGGCCTGGGCGACATGACCACCAGCCAGGCCAAAACTAAATCTTTTGACT
CTTGGAGCTACAGTGAGATGGAGAAAGAGTTCCCTGAGCTTATCCGAAGCGTTGGGCTGCTTAC
AGTGGCCACCGAGCCTGTCCCTTCCAGCTGTGGAGAAGCCAATGAGGATTCATCTCAAGCGTCC
CTTTCAGATGATCACAAAGGTGAACACGGGGAAGACGGTGCTCCCGTACCTGGACAGCAGCTGG
ACTCAACGGTGGGAATGTCTTCCTTAGACGGCACGCTGGCAAATGCTGCCGAACACCCTTCGGA
GACAGCAAAACAAGACTCTACTTCCTCCCCACAGCTTGGTGCGAAGAAAACCCAGCCTGGTCCT
TGTGAAATTACGACTCCCAAGAGATCCATCCGCGATTGCTTTAATTATAACGAGGACTCCCCCA
CACAGCCCACATTACCCAAAAGAGGGCTTTTTCTAAAAGAAACTCAAAAGAATGAGCGCAAAGG
CAGTGACAGGAAGGGGCAGGTGGTTGATTTAAAGCCTGAACTGAGCAGAAGCACCCCTTCCCTG
GTGGACCCCCCTGACAGATCGAAGCTCTGCCTAGTGTTGCAGTCCTCCTACCCCAGCAGCCCTT
CTGCTGCCAGCCAGTCCTATGAATGTTTGCACAAGGTGGGGCTCGGCAATCTTGAAAACATAGT
CAGAAGTCACATTAAAGAAATTTCTTCCAGTCTGGGAAGGCTTACTGACTGCCATAAAGAGAAA
TTGCGACTGAAAAAGCCACACAAGACCTTGGCCGAAGTGTCTCTGTGCAGAATCCCTAAACAGG
GAGGCGGTTCAGGAAAGCGATCTGAGAGCACCGGGAGCTCAGCAGGGCCCAGCATGGTATCACC
TGGAGCTCCCAAAGCCACGATGAGACCAGAAACAGATTCTGCGTCTACAGCCTCAGGTGGCCTG
TGCCACCAGAGAAATCGCAGTGGACAATTGCCAGTGCAGTCGAAGGCCTCCAGTTCACCCCCTT
GCAGTCACAGCAGTGAATCTTCTCTTGGCTCAGATAGCATCAAATCCCCGGTTCCTCTTCTTTC
AAAAAACAAAAGCCAAAAAAGCTCCCCACCTGCTCCATGTCACGCCACACAGAACGGTCAGGTG
GTGGAGGCCTGGTACGGCTCTGATGAGTACCTAGCGCTGCCCTCTCACCTGAAGCAGACGGAGG
TGTTAGCTCTCAAGCTGGAGAGCCTAACCAAGCTCCTACCCCAGAAACCCAGAGGAGAGACCAT
CCAGGATATTGATGACTGGGAACTGTCTGAAATGAATTCAGATTCCGAAATCTATCCAACATAC
CACATCAAGAAAAAACACACGAGACTGGGCACAGTGTCTCCAAGCTCATCCAGCGACATAGCCT
CATCTCTCGGGGAGAGCATTGAATCCGGGCCCCTGAGTGACATTCTTTCTGACGAGGACTTATG
TCTGCCCCTCTCCAGCGTGAAAAAGTTCACTGACGAGAAATCAGAGAGACCTTCATCCTCCGAG
AAGAACGAGAGCCATTCTGCAACAAGATCAGCTTTGATTCAGAAACTAATGCACGATATTCAGC
ACCAAGAGAACTATGAAGCCATCTGGGAAAGAATTGAGGGGTTTGTGAACAAGCTGGATGAATT
CATTCAGTGGCTAAACGAAGCCATGGAGACCACCGAGAACTGGACTCCTCCTAAAGCCGAGACC
GACAGCCTCCGGCTGTACCTGGAGACACACTTGAGTTTTAAGTTGAACGTAGACAGCCACTGTG
CCCTCAAGGAAGCCGTGGAGGAAGAAGGACACCAACTTCTTGAGCTCGTTGTATCTCACAAAGC
AGGACTGAAGGACACGCTGAGGATGATTGCGAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAA
CGGCAACACAGCTGGATTCTCAGAGCCCTGGACACCATCAAAGCCGAGATACTGGCTACTGATG
TGTCTGTGGAGGACGAGGAGGGGACGGGAAGCCCCAAGGCCGAGGTTCAGCTCTGCCACCTGGA
AACACAGAGAGACGCCGTGGAACAGATGTCCCTGAAGCTGTACAGCGAGCAGTACACCAGCGGG
AGCAAGAGGAAGGAAGAGTTTGCCAACATGTCGAAAGCGCACGCGGAGGGAAGCAATGGGCTTC
TGGACTTTGATTCAGAATATCAGGAGCTCTGGGATTGGCTGATTGACATGGAGTCCCTCGTGAT
GGACAGCCACGACCTGATGATGTCAGAGGAGCAGCAGCAGCATCTTTACAAGAGGTACAGTGTG
GAAATGTCCATCAGGCATCTGAAAAAGTCAGAGCTACTCAGCAAGGTTGAAGCTTTGAAGAAAG
GTGGCCTTTCACTACCAGACGATATCCTGGAAAAAGTGGATTCAATTAATGAAAAATGGGAGCT
GCTTGGGAAAACCCTAAGAGAGAAGATACAGGACACAATAGCGGGGCACAGTGGGTCGGGCCCA
CGTGACCTGCTATCTCCTGAAAGCGGAAGCCTGGTAAGGCAGCTGGAGGTCAGGATCAAAGAGC
TGAAAAGGTGGCTAAGAGATACAGAGCTTTTCATCTTCAATTCCTGTCTGAGACAAGAGAAGGA
AGGAACAAGCGCCGAGAAACAGCTCCAATACTTTAAGTCGCTCTGTCGTGAGATCAAGCAGCGG
CGTCGAGGAGTGGCCTCCATTCTGAGGTTGTGCCAGCACCTTCTGGATGACCGGGACACGTGCA
ACCTGAACGCAGATCACCAGCCCATGCAGCTGATCATTGTAAACCTCGAGAGGCGGTGGGAGGC
CATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACAAAAGAAGATGGGGAAGGAATCCGAG
ACTTTGAATGTGATTGATCCTGGCTTGATGGACCTGAATGGAATGAGTGAGGATGCCCTGGAAT
GGGATGAAACAGACATAAGTAACAAACTCATTAGTGTGCATGAAGAATCAAACGACCTTGATCA
AGACCCAGAGCCTATGCTACCCGCAGTGAAGCTTGAAGAGACACACCACAAGGACTCTGGTTAT
GAAGAGGAGGCAGGTGACTGTGGAGGGTCTCCGTATACCTCAAATATCACTGCACCTTCCAGCC
CACACATTTACCAAGTGTACAGTCTTCACAATGTGGAGCTCCACGAGGACAGCCACACTCCATT
TCTGAAAAGCAGCCCTAAGTTCACAGGCACAACACAGCCTACTGTTTTAACTAAGAGCCTCAGC
AAGGACTCTTCCTTTTCATCTACAAAATCGTTACCAGACCTTCTAGGGGGTTCCGGTTTGGTGA
GGCCTTACTCGTGTCACAGTGGAGACTTGAGCCAGAATTCAGGCAGTGAGAGTGGAATTGTCAG
CGAAGGAGACAACGAGATGCCGACCAACTCTGACATGAGCTTGTTCAGTATGGTAGACGGGTCC
CCAAGTAACCCTGAAACGGAGCATCCGGACCCACAAATGGGAGATGCAGCCAATGTGCTAGAGC
AAAAGTTTAAAGACAACGGGGAAAGCATTAAGCTTTCAAGTGTCTCTCGGGCATCCGTCTCACC
AGTGGGTTGTGTAAATGGAAAAGCAGGGGATTTAAACAGTGTTACCAAACACACTGCTGATTGT
TTGGGAGAAGAACTACAAGGAAAACATGACGTGTTTACATTTTATGATTACTCGTACCTCCAAG
GCTCAAAACTCAAATTACCAATGATAATGAAACAGCCACAGAGTGAAAAGGCACACGTGGAGGA
TCCCCTTCTTGGTGGTTTTTATTTTGATAAAAAGTCCTGCAAAGCTAAACATCAGGCTTCAGAG
TCACAACCAGATGCGCCTCCCCACGAAAGGATTCTGGCAAGCGCGCCCCACGAGATGGGACGCA
GCGCATACAAAAGTAGCGACATAGAGAAGACATTCACGGGCATTCAGAGTGCCAGACAGCTCTC
CCTTCTATCTCGTAGCTCATCTGTAGAGTCCCTTTCTCCAGGGGGTGATTTGTTTGGATTGGGA
ATCTTTAAAAATGGCAGTGACAGCCTCCAGCGGAGCACTTCTTTAGAAAGTTGGTTGACATCCT
ATAAGAGCAATGAGGATCTCTTTAGCTGTCACAGCTCTGGGGACATAAGTGTGAGCAGTGGCTC
AGTTGGTGAGCTGAGTAAGAGGACGTTAGACCTTCTGAATCGCCTGGAGAATATACAGAGCCCC
TCGGAGCAAAAGATCAAGCGGAGTGTTTCTGACATGACTCTACAAAGCAGTTCCCAAAAGATGC
CCTTCGCTGGCCAGATGTCACTGGATGTCGCATCCTCCATCAATGAAGACTCTCCGGCATCTCT
TACAGAACTGAGTAGTAGCGATGAGCTCTCTCTTTGCTCGGAGGACATTGTGTTACACAAAAAC
AAGATCCCAGAATCCAACGCATCATTCAGGAAGCGCCTGAATCGCTCAGTGGCTGATGAGAGCG
ACGTCAATGTTAGCATGATTGTCAATGTGTCCTGCACCTCTGCTTGCACTGATGATGAAGATGA
CAGCGACCTCCTCTCCAGCTCCACTCTCACCTTAACTGAAGAAGAGCTGTGCCTCAAAGATGAG
GATGACGACTCCAGTATTGCAACAGATGATGAAATTTATGAAGAGAGCAACCTGATGTCTGGGC
TGGACTACATAAAGAATGAACTGCAGACTTGGATAAGACCAAAACTTTCCTTGACGAGAGAAAA
GAAACGGTCCGGTGTCACTGATGAAATAAAGGTCAATAAAGATGGGGGAGGCAATGAGAAGGCC
AATCCCTCGGACACCCTGGACATCGAGGCCCTTCTCAATGGCTCCATAAGATGTCTTTCCGAAA
ACAACGGGAATGGTAAGACTCCGCCCAGAACTCATGGCTCAGGAACCAAAGGTGAAAATAAGAA
AAGTACGTATGACGTTAGTAAGGATCCGCACGTGGCTGACATGGAAAATGGCAATATTGAAAGT
ACCCCAGAAAGAGAAAGGGAGAAGCCACAAGGGCTTCCAGAGGTGTCAGAGAACCTTGCTTCAA
ATGTGAAAACGATTTCTGAATCTGAGCTCAGCGAGTATGAAGCAGTAATGGATGGTTCTGAGGA
TTCAAGTGTTGCCAGAAAGGAATTTTGTCCCCCAAATGACAGACATCCTCCACAGATGGGTCCC
AAACTCCAGCATCCCGAAAATCAAAGTGGCGACTGCAAGCCAGTCCAGAACCCTTGCCCGGGGC
TACTGTCGGAAGCTGGCGTTGGAAGCAGGCAAGACAGCAATGGACTAAAATCTTTGCCTAACGA
TGCACCAAGTGGGGCTAGAAAACCTGCCGGTTGCTGCCTGCTGGAGCAGAATGAGACAGAGGAA
AGTGCTTCTATCAGCAGCAACGCTTCCTGTTGCAACTGCAAGCCAGATGTTTTCCATCAAAAAG
ATGATGAAGATTGTTCAGTACATGACTTTGTTAAGGAAATCATTGACATGGCATCAACAGCCCT
AAAAAGTAAGTCACAGCCTGAAAGTGAGGTGGCCGCACCCACATCACTAACCCAAATTAAGGAG
AAGGTGTTAGAGCATTCGCACCGGCCCATACACCTGAGAAAGGGGGACTTTTACTCCTACTTAT
CACTTTCGTCCCACGACAGTGACTGTGGGGAGGTCACCAATTACATAGATGAGAAGAGCAGTAC
TCCATTGCCACCGGACGCTGTGGACTCTGGCTTAGATGACAAGGAAGACATGGACTGCTTCTTT
GAAGCTTGTGTTGAGGATGAGCCTGTCAATGAGGAAGCTGGTCTCCCCGGTGCCCTTCCCAATG
AATCAGCCATCGAGGATGGAGCAGAGCAAAAGTCAGAACAAAAGACAGCCAGCTCTCCTGTGCT
CAGTGACAAGACAGACCTGGTGCCTCTTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCA
AAGGAAGGAGATGATGTGTCTCACACTTCCCAGGGCTGTGCAGAGAGCACAGAGCCTACCACCC
CCTCAGGAAAGGCCAATGCAGAGGGGAGGTCAAGAATGCAAGGTGTATCAGCAACGCCAGAAGA
AAACGCTGCTTCGGCCAAACCGAAAATTCAAGCTTTCTCTTTGAATGCAAAACAGCCAAAAGGC
AAGGTTGCCATGAGGTATCCCAGCCCCCAAACTCTAACCTGTAAAGAGAAGCTCGTAAACTTTC
ATGAAGATCGACACAGTAACATGCATAGGTAGAGTGTAATGCCCCCACGCATGGAAATCATCTC
ATTGAAAGATAGCCTGGCTGAAGCTCAGGGCTAGCCCAATCCACCCTGGGCCGGTCTTGGGCTC
CATCCTGTTATCACTGCCGCCTGTCACATTGACTTTCTGAAGACGAACCTTCCTTCCGAATGCA
GTCTGTCCACGTGGGCCTCTCGACCTGGATGTGTGCATTGCTTCTCTTAGGTGATCATCCTAGT
TCCACAAAGCTGCTTGTTCTCCCGTGGATTCCTGTCCCAAGCTACCTCTGGCAACCCTGTCTCT
CCAGCAAGACTTCGGTTTTCCCTCCCCCTCCTCCCCCCCCTTAAAGTTCCGCGGCTCACCAAAT
TGATGGTCCATCAAACCCACTGTCTGGAATGATACCCCTCCCATCAGTACTTGACCAATGTTAT
GTTTTGCTCTGAAAACTTTCGCTGTATTAGACCAATGTTTATTGAAAGAGATTTACCTAAAAAG
CCCGCCCTTGATTTGGTTGCAGTATAGAGGAGACACATTGATCCTTCTAACAAAATTAAGTGAT
GTCTGAAAGCGCCATTTTAATTATTTCTTTTTAAATAATGATCTATGCAGCACTTCAAGAAACA
ACTATAACAGTGTTGTATCTTATAAACTGGTACATTCTACTATTAAGTTTGTTTTTGGTTTCTA
TGCTTCTTGAGGTGGTGATGAGAAAAATGGTTTTTTTTTTAAAACGGTGTGCCTTGCTGTATTA
CTTATAGCATTTATTAAAAAGCTGCTTTCATGGTAAGATTACACTGGTTTGAAAGGAGGAAATA
GCAAGGTTAAGATGCGTGCATAATTTCTGTATATATGTATAAGCTAGTGCAAACACTGATGTAT
GACAGTATAAAATGCTTTCATGTTTGTGATGTCCAGTGGTGTGGAATATAAGCCTTAAACCCGT
TCGATTGCATGGTAATTAAAATTGGCATAATAAAAATAGCTTATTGGGGGAAAGGAAAATTAAT
GATCTCTTCTACCTGTGTTTACCAATTTCTTTCATGTGGTTCTGGGAAAGAAAAAGAAACAAAC
CCCATATATTAGCTTCCAAAATATCCATATTGCACAGAAGGCTTAAGTTGCTTAGACTACAGAC
TGGGCCTGAAGACTTCATGATTTTCCAAATTTTTCTGTTTCACTATAAACATCCGAAATAGCAA
AGATTTCTTTCCCCTCCATCAACAGCATTTTATTCTGAATGTTTTTATTTCTACTTGTTAATGG
TTTAAAGTTGTATTTGGAGATCTCTTACATGCCCTAATTTATTTTAAATATTTGAATGGGTTTG
GTGGATGGTATAGAAAATTTAATTATTATTTTATTTAAACTACAGATTTCAGGTGTATTTATTT
TGTTAAATATTCCATTTGGTCTTTTGGTCTTTTTATGACTTGAAAGTTTCAGCTTTTAATTTAT
ATCATAACTCCTACTAAAGTGCCTGACACACAGTAGGTATTTCATAGAGTTTCCTGAATTAGAG
TATTGGGTGGTTTATATATATATATATATATATGAGATTCCTGCATTAAAACTAGAAAAAGATG
TGCAAAGTGAACCAGACACAGCATATTATCAGATTTCAAAAAGGAAAGAGAACATAGCCACAGA
AATGACAATCATTCATTCAGTAGATTAGCATCTTTTGCCTGCAAGTCACCATTCTAGATTCAGG
GAGAGCAGCTATGACCGATGCACTGCCTTTGGAGGCTTCTGTGTTAGAGACAGAGTGAC

hide sequence

RefSeq Acc Id:

XM_017594342 ⟹ XP_017449831

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	76,011,183 - 76,359,667 (+)	NCBI
mRatBN7.2	6	70,275,852 - 70,624,369 (+)	NCBI
Rnor_6.0	6	73,645,526 - 73,991,992 (+)	NCBI

Sequence:

show sequence

TGTGGTACATGAGTCAAGAAGATACAGGCAGGTTATTGAGAAGGCTCTGCTGTTTCCGAGAGCC
GCGTCGGTTATGAGAAACTACTGCCTGCCAGGGAACGACATGAAAAATTAAAATGTCGAGTGCA
CAGTCATCTTCCATGCCACCAAGCTGCTGCTGGGTGTCAGCGAGTCGCTCCCCCGTGCGGGGCG
TGACTGCAGGCTTGGCTGGGTCTCGGAGCGAGTGAGCAGCTCAGATTGTGACCTCTTGTGGAAA
CGGCAGCTTCTTCTTTCTCTCTGCGGCTCGGCTTGGGTGGTGGGAAGTGGTGAGAGCAGATGGC
TGGACGGACTGTGCTTTCAGACCATAGCGTGCTGATGGCGTAGCTGTTTTGGAAAGAAGTAAGG
CTTAGATTTCTCCATGTTAACCATGAGCGTGACACTTTCCCCACTGAGGTCACAGGGCCCAGAT
CCCATGGCGACGGATGCTTCACCCATGGCCATCAACATGACACCCACTGTGGAGCAGGAGGAAG
GAGAGGGAGAGGAAGCCGTGAAGGCCATAGACGCTGAGCAGCAGTATGGAAAGCCACCTCCGCT
CCACACAGCAGCCGACTGGAAGATTGTCCTGCACTTACCTGAGATTGAGACCTGGCTCCGGATG
ACCTCAGAGAGGGTCCGTGACCTGACCTACTCAGTCCAGCAGGATGCAGACAGCAAGCATGTGG
ATGTGCATCTAGTTCAGCTGAAGGACATTTGTGAGGATATTTCTGACCATGTGGAGCAGATCCA
TGCCCTCCTTGAGACGGAGTTCTCCCTAAAGCTGCTGTCCTACTCGGTCAACGTCATCGTAGAC
ATCCACGCAGTACAGCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCCGGGAGCGCA
TCCTACAAGGTCTGCAGGACGCCAATGGCAACTACACCAGGCAGACTGACATTCTGCAAGCGTT
CTCTGAAGAAACAACGGAGGGCCGGCTTGATTCCCTCACAGAAGTGGACGACTCAGGGCAGTTA
ACTATCAAATGTTCACAGGATTACTTGTCTCTGGATTGTGGCATTACCGCATTTGAACTCTCCG
ACTACAGTCCAAGTGAGGATCTGCTTGGTGGCCTGGGCGACATGACCACCAGCCAGGCCAAAAC
TAAATCTTTTGACTCTTGGAGCTACAGTGAGATGGAGAAAGAGTTCCCTGAGCTTATCCGAAGC
GTTGGGCTGCTTACAGTGGCCACCGAGCCTGTCCCTTCCAGCTGTGGAGAAGCCAATGAGGATT
CATCTCAAGCGTCCCTTTCAGACGATCACAAAGGTGAACACGGGGAAGACGGTGCTCCCGTACC
TGGACAGCAGCTGGACTCAACGGTGGGAATGTCTTCCTTAGACGGCACGCTGGCAAATGCTGCC
GAACACCCTTCGGAGACAGCAAAACAAGACTCTACTTCCTCCCCACAGCTTGGTACGAAGAAAA
CCCAGCCTGGTCCTTGTGAAATTACGACTCCCAAGAGATCCATCCGCGATTGCTTTAATTATAA
CGAGGACTCCCCCACACAGCCCACATTACCCAAAAGAGGGCTTTTTCTAAAAGAAACTCAAAAG
AATGAGCGCAAAGGCAGTGACAGGAAGGGGCAGGTGGTTGACTTAAAGCCTGAACTGAGCAGAA
GCACCCCTTCCCTGGTGGACCCCCCTGACAGATCGAAGCTCTGCCTAGTGTTGCAGTCCTCCTA
CCCCAGCAGCCCTTCTGCTGCCAGCCAGTCCTATGAATGTTTGCACAAGGTGGGGCTCGGCAAT
CTTGAAAACATAGTCAGAAGTCACATTAAAGAAATTTCTTCCAGTCTGGGAAGGCTTACTGACT
GCCATAAAGAGAAATTGCGACTGAAAAAGCCACACAAGACCTTGGCCGAAGTGTCTCTGTGCAG
AATCCCTAAACAGGGAGGCGGTTCAGGAAAGCGATCTGAGAGCACCGGGAGCTCAGCAGGGCCC
AGCATGGTATCACCTGGAGCTCCCAAAGCCACGATGAGACCAGAAACAGATTCTGCGTCTACAG
CCTCAGGTGGCCTGTGCCACCAGAGAAATCGCAGTGGACAATTGCCAGTGCAGTCGAAGGCCTC
CAGTTCACCCCCTTGCAGTCACAGCAGTGAATCTTCTCTTGGCTCAGATAGCATCAAATCCCCG
GTTCCTCTTCTTTCAAAAAACAAAAGCCAAAAAAGCTCCCCACCTGCTCCATGTCACGCCACAC
AGAACGGTCAGGTGGTGGAGGCCTGGTACGGCTCTGATGAGTACCTAGCGCTGCCCTCTCACCT
GAAGCAGACAGAGGTGTTAGCTCTCAAGCTGGAGAGCCTAACCAAGCTCCTACCCCAGAAACCC
AGAGGAGAGACCATCCAGGATATTGATGACTGGGAACTGTCTGAAATGAATTCAGATTCCGAAA
TCTATCCAACATACCACATCAAGAAAAAACACACGAGACTGGGCACAGTGTCTCCAAGCTCATC
CAGCGACATAGCCTCATCTCTCGGGGAGAGCATTGAATCCGGGCCCCTGAGTGACATTCTTTCT
GACGAGGACTTATGTCTGCCCCTCTCCAGCATGAAAAAGTTCACTGACGAGAAATCAGAGAGAC
CTTCATCCTCCGAGAAGAACGAGAGCCATTCTGCAACAAGATCAGCTTTGATTCAGAAACTAAT
GCACGATATTCAGCACCAAGAGAACTATGAAGCCATCTGGGAAAGAATTGAGGGGTTTGTGAAC
AAGCTGGATGAATTCATTCAGTGGCTAAACGAAGCCATGGAGACCACCGAGAACTGGACTCCTC
CTAAAGCCGAGACCGACAGCCTCCGGCTGTACCTGGAGACACACTTGAGTTTTAAGTTGAACGT
AGACAGCCACTGTGCCCTCAAGGAAGCCGTGGAGGAAGAAGGACACCAACTTCTTGAGCTCGTT
GTATCTCACAAAGCAGAAGGACTGAAGGACACGCTGAGGATGATTGCGAGTCAATGGAAGGAGC
TGCAGAGGCAAATCAAACGGCAACACAGCTGGATTCTCAGAGCCCTGGACACCATCAAAGCCGA
GATACTGGCTACTGATGTGTCTGTGGAGGACGAGGAGGGGACGGGAAGCCCCAAGGCCGAGGTT
CAGCTCTGCCACCTGGAAACACAGAGAGACGCCGTGGAACAGATGTCCCTGAAGCTGTACAGCG
AGCAGTACACCAGCGGGAGCAAGAGGAAGGAAGAGTTTGCCAACATGTCGAAAGCGCACGCGGA
GGGAAGCAATGGGCTTCTGGACTTTGATTCAGAATATCAGGAGCTCTGGGATTGGCTGATTGAC
ATGGAGTCCCTCGTGATGGACAGCCACGACCTGATGATGTCAGAGGAGCAGCAGCAGCATCTTT
ACAAGAGGTACAGTGTGGAAATGTCCATCAGGCATCTGAAAAAGTCAGAGCTACTCAGCAAGGT
TGAAGCTTTGAAGAAAGGTGGCCTTTCACTACCAGACGATATCCTGGAAAAAGTGGATTCAATT
AATGAAAAATGGGAGCTGCTTGGGAAAACCCTAAGAGAGAAGATACAGGACACAATAGCGGGGC
ACAGTGGGTCGGGCCCACGTGACCTGCTATCTCCTGAAAGCGGAAGCCTGGTAAGGCAGCTGGA
GGTCAGGATCAAAGAGCTGAAAAGGTGGCTAAGAGATACAGAGCTTTTCATCTTCAATTCCTGT
CTGAGACAAGAGAAGGAAGGAACAAGCGCCGAGAAACAGCTCCAATACTTTAAGTCGCTCTGTC
GTGAGATCAAGCAGCGGCGTCGAGGAGTGGCCTCCATTCTGAGGTTGTGCCAGCACCTTCTGGA
TGACCGGGACACGTGCAACCTGAACGCAGATCACCAGCCCATGCAGCTGATCATTGTAAACCTC
GAGAGGCGGTGGGAGGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACAAAAGAAGA
TGGGGAAGGAATCCGAGACTTTGAATGTGATTGATCCTGGCTTGATGGACCTGAATGGAATGAG
TGAGGATGCCCTGGAATGGGATGAAACAGACATAAGTAACAAACTCATTAGTGTGCATGAAGAA
TCAAACGACCTTGATCAAGACCCAGAGCCTATGCTACCCGCAGTGAAGCTTGAAGAGACACACC
ACAAGGACTCTGGTTATGAAGAGGAGGCAGGTGACTGTGGAGGGTCTCCGTATACCTCAAATAT
CACTGCACCTTCCAGCCCACACATTTACCAAGTGTACAGTCTTCACAATGTGGAGCTCCACGAG
GACAGCCACACTCCATTTCTGAAAAGCAGCCCTAAGTTCACAGGCACAACACAGCCTACTGTTT
TAACTAAGAGCCTCAGCAAGGACTCTTCCTTTTCATCTACAAAATCGTTACCAGACCTTCTAGG
GGGTTCCGGTTTGGTGAGGCCTTACTCGTGTCACAGTGGAGACTTGAGCCAGAATTCAGGCAGT
GAGAGTGGAATTGTCAGCGAAGGAGACAACGAGATGCCGACCAACTCTGACATGAGCTTGTTCA
GTATGGTAGACGGGTCCCCAAGTAACCCTGAAACGGAGCATCCGGACCCACAAATGGGAGATGC
AGCCACTGTGCTAGAGCAAAAGTTTAAAGACAACGGGGAAAGCATTAAGCTTTCAAGTGTCTCT
CGGGCATCCGTCTCACCAGTGGGTTGTGTAAATGGAAAAGCAGGGGATTTAAACAGTGTTACCA
AACACACTGCTGATTGTTTGGGAGAAGAACTACAAGGAAAACATGACGTGTTTACATTTTATGA
TTACTCGTACCTCCAAGGCTCAAAACTCAAATTACCAATGATAATGAAACAGCCACAGAGTGAA
AAGGCACACGTGGAGGATCCCCTTCTTGGTGGTTTTTATTTTGATAAAAAGTCCTGCAAAGCTA
AACATCAGGCTTCAGAGTCACAACCAGATGCGCCTCCCCACGAAAGGATTCTGGCAAGCGCGCC
CCACGAGATGGGACGCAGCGCATACAAAAGTAGCGACATAGAGAAGACATTCACGGGCATTCAG
AGTGCCAGACAGCTCTCCCTTCTATCTCGTAGCTCATCTGTAGAGTCCCTTTCTCCAGGGGGTG
ATTTGTTTGGATTGGGAATCTTTAAAAATGGCAGTGACAGCCTCCAGCGGAGCACTTCTTTAGA
AAGTTGGTTGACATCCTATAAGAGCAATGAGGATCTCTTTAGCTGTCACAGCTCTGGGGACATA
AGTGTGAGCAGTGGCTCAGTTGGTGAGCTGAGTAAGAGGACGTTAGACCTTCTGAATCGCCTGG
AGAATATACAGAGCCCCTCGGAGCAAAAGATCAAGCGGAGTGTTTCTGACATGACTCTACAAAG
CAGTTCCCAAAAGATGCCCTTCGCTGGCCAGATGTCACTGGATGTCGCATCCTCCATCAATGAA
GACTCTCCGGCATCTCTTACAGAACTGAGTAGTAGCGATGAGCTCTCTCTTTGCTCGGAGGACA
TTGTGTTACACAAAAACAAGATCCCAGAATCCAACGCATCATTCAGGAAGCGCCTGAATCGCTC
AGTGGCTGATGAGAGCGACGTCAATGTTAGCATGATTGTCAATGTGTCCTGCACCTCTGCTTGC
ACTGATGATGAAGATGACAGCGACCTCCTCTCCAGCTCCACTCTCACCTTAACTGAAGAAGAGC
TGTGCCTCAAAGATGAGGATGACGACTCCAGTATTGCAACAGATGATGAAATTTATGAAGAGAG
CAACCTGATGTCTGGGCTGGACTACATAAAGAATGAACTGCAGACTTGGATAAGACCAAAACTT
TCCTTGACGAGAGAAAAGAAACGGTCCGGTGTCACTGATGAAATAAAGGTCAATAAAGATGGGG
GAGGCAATGAGAAGGCCAATCCCTCGGACACCCTGGACATCGAGGCCCTTCTCAATGGCTCCAT
AAGATGTCTTTCCGAAAACAACGGGAATGGTAAGACTCCGCCCAGAACTCATGGCTCAGGAACC
AAAGGTGAAAATAAGAAAAGTACGTATGACGTTAGTAAGGATCCGCACGTGGCTGACATGGAAA
ATGGCAATATTGAAAGTACCCCAGAAAGAGAAAGGGAGAAGCCACAAGGGCTTCCAGAGGTGTC
AGAGAACCTTGCTTCAAATGTGAAAACGATTTCTGAATCTGAGCTCAGCGAGTATGAAGCAGTA
ATGGATGGTTCTGAGGATTCAAGTGTTGCCAGAAAGGAATTTTGTCCCCCAAATGACAGACATC
CTCCACAGATGGGTCCCAAACTCCAGCATCCCGAAAATCAAAGTGGCGACTGCAAGCCAGTCCA
GAACCCTTGCCCGGGGCTACTGTCGGAAGCTGGCGTTGGAAGCAGGCAAGACAGCAATGGACTA
AAATCTTTGCCTAACGATGCACCAAGTGGGGCTAGAAAACCTGCCGGTTGCTGCCTGCTGGAGC
AGAATGAGACAGAGGAAAGTGCTTCTATCAGCAGCAACGCTTCCTGTTGCAACTGCAAGCCAGA
TGTTTTCCATCAAAAAGATGATGAAGATTGTTCAGTACATGACTTTGTTAAGGAAATCATTGAC
ATGGCATCAACAGCCCTAAAAAGTAAGTCACAGCCTGAAAGTGAGGTGGCCGCACCCACATCAC
TAACCCAAATTAAGGAGAAGGTGTTAGAGCATTCGCACCGGCCCATACACCTGAGAAAGGGGGA
CTTTTACTCCTACTTATCACTTTCGTCCCACGACAGTGACTGTGGGGAGGTCACCAATTACATA
GATGAGAAGAGCAGTACTCCATTGCCACCGGACGCTGTGGACTCTGGCTTAGATGACAAGGAAG
ACATGGACTGCTTCTTTGAAGCTTGTGTTGAGGATGAGCCTGTCAATGAGGAAGCTGGTCTCCC
CGGTGCCCTTCCCAATGAATCAGCCATCGAGGATGGAGCAGAGCAAAAGTCAGAACAAAAGACA
GCCAGCTCTCCTGTGCTCAGTGACAAGACAGACCTGGTGCCTCTTTCAGGACTTTCCCCTCAGA
AGGGAGCTGATGATGCAAAGGAAGGAGATGATGTGTCTCACACTTCCCAGGGCTGTGCAGAGAG
CACAGAGCCTACCACCCCCTCAGGAAAGGCCAATGCAGAGGGGAGGTCAAGAATGCAAGGTGTA
TCAGCAACGCCAGAAGAAAACGCTGCTTCGGCCAAACCGAAAATTCAAGCTTTCTCTTTGAATG
CAAAACAGCCAAAAGGCAAGGTTGCCATGAGGTATCCCAGCCCCCAAACTCTAACCTGTAAAGA
GAAGCTCGTAAACTTTCATGAAGATCGACACAGTAACATGCATAGGTAGAGTGTAATGCCCCCA
CGCATGGAAATCATCTCATTGAAAGATAGCCTGGCTGAAGCTCAGGGCTAGCCCAATCCACCCT
GGGCCGGTCTTGGGCTCCATCCTGTTATCACTGCCGCCTGTCACATTGACTTTCTGAAGACGAA
CCTTCCTTCCGAATGCAGTCTGTCCACGTGGGCCTCTCGACCTGGATGTGTGCATTGCTTCTCT
TAGGTGATCATCCTAGTTCCACAAAGCTGCTTGTTCTCCCGTGGATTCCTGTCCCAAGCTACCT
CTGGCAACCCTGTCTCTCCAGCAAGACTTCGGTTTTCCCTCCCCCTCCTCCCCCCCTTAAAGCT
CCGCGGCTCACCAAATTGATGGTCCATCAAACCCACTGTCTGGAATGATACCCCTCCCATCAGT
ACTTGACCAATGTTATGTTTTGCTCTGAAAACTTTCGCTGTATTAGACCAATGTTTATTGAAAG
AGATTTACCTAAAAAGCCCGCCCTTGATTTGGTTGCAGTATAGAGGAGACACATTGATCCTTCT
AACAAAATTAAGTGATGTCTGAAAGCGCCATTTTAATTATTTCTTTTTAAATAATGATCTATGC
AGCACTTCAAGAAACAACTATAACAGTGTTGTATCTTATAAACTGGTACATTCTACTATTAAGT
TTGTTTTTGGTTTCTATGCTTCTTGAGGTGGTGATGAGAAAAATGGTTTTTTTTTTAAAACGGT
GTGCCTTGCTGTATTACTTATAGCATTTATTAAAAAGCTGCTTTCATGGTAAGATTACACTGGT
TTGAAAGGAGGAAATAGCAAGGTTAAGATGCGTGCATAATTTCTGTATATATGTATAAGCTAGT
GCAAACACTGATGTATGACAGTATAAAATGCTTTCATGTTTGTGATGTCCAGTGGTGTGGAATA
TAAGCCTTAAACCCGTTCGATTGCATGGTAATTAAAATTGGCATAATAAAAATAGCTTATTGGG
GGAAAGGAAAATTAATGATCTCTTCTACCTGTGTTTACCAATTTCTTTCATGTGGTTCTGGGAA
AGAAAAAGAAACAAACCCCATATATTAGCTTCCAAAATATCCATATTGCACAGAAGGCTTAAGT
TGCTTAGACTACAGACTGGGCCTGAAGACTTCATGATTTTCCAAATTTTTCTGTTTCACTATAA
ACATCCGAAATAGCAAAGATTTCTTTCCCCTCCATCAACAGCATTTTATTCTGAATGTTTTTAT
TTCTACTTGTTAATGGTTTAAAGTTGTATTTGGAGATCTCTTACATGCCCTAATTTATTTTAAA
TATTTGAATGGGTTTGGTGGATGGTATAGAAAATTTAATTATTATTTTATTTAAACTACAGATT
TCAGGTGTATTTATTTTGTTAAATATTCCATTTGGTCTTTTGGTCTTTTTATGACTTGAAAGTT
TCAGCTTTTAATTTATATCATAACTCCTACTAAAGTGCCTGACACACAGTAGGTATTTCATAGA
GTTTCCTGAATTAGAGTATTGGGTGGTTTATATATATATATATATATGAGATTCCTGCATTAAA
ACTAGAAAAAGATGTGCAAAGTGAACCAGACACAGCATATTATCAGATTTCAAAAAGGAAAGAG
AACATAGCCACAGAAATGACAATCATTCATTCAGTAGATTAGCATCTTTTGCCTGCAAGTCACC
ATTCTAGATTCAGGGAGAGCAGCTATGACCGATGCACTGCCTTTGGAGGCTTCTGTGTTAGAGA
CAGAGTGACTGGCCACACAGATGACGCGCTATAGCACCCCACAGATGAGGAAGAAAGCATGTAT
AGAGAAAGAGTCACAAAGAGAGCGATGGCAGGGAGGGACAGGGGCCAGAGAAAGGCTAGGAGAG
AGTGGAGGTTAGTGGTTAGTGGGGCTTTACTACAGGTGTGACAGGAGAGAAGGCCAAATAAAGA
GGACTGAAAGGTGTTTACGGAGTTGACGTGGAGCTTCTGTGTGCTGTGTACTAGGTATAGAAGA
CCCAATAGCTTGCGTGGGGCTTTATTTACCCCATGATTGGAACTTTACTAGCACCATCCCAAGA
ACACTTAAATACCACACATCTGCAATTTCACAACCTTAATTATTTAGTGTGGGTTTTGCCTCTT
CTAACCTTCGCTGCACATATTTTTAAATGGATGGCCTAGTCTAGGCTTTTGGATATGTAGTGAC
TTCTTCCAAAGGAGTTTTAGAGAGACATCTAGTTATAGTGTTCACAAGGATTGCAGAGGGGAGA
TATTAGACATAACTGTGTGGTAGGGGGAAAGTAAGGGGGAAAATTAGCTAGAATCGAGGCAGTA
ACAGACTGCACAGGGATTGTAGCCTGAGATAGAGAAAGACAGATCATAGAGCCCAGAAAAGTAT
TTGAACATTTTTAGACCTCTGTTGGGATATGGCATTATTTTATATACCAAGACAACCTGAATTC
TCTTGGTCTGTGACTAATATTAAGTCTATGTCTATTGAAAAGACATTCAAAAAATTGAATAGGC
CATGCTGGACTATTTGCCTCTTATGTGCTCATAAAGACTTAGAATTTGAAAATATTTATTAGCT
CTCTACTTGACACTAACACCAAATTGACCAGGTTGACCTTGGGGTTTATTAATGCCTTTTCCAG
CCAGGAGAGATGGAGCCTCAGTCTCATGCCCTGTGTAGACACTACCGTCCCAGTCGCATTGGAA
AACAGCTCATTTGCTCTGTATTGGTTTGACCAACCATATCTACACACAACGATAGTTTGTTATT
TGTTGAGGCCAACCGCCCCTCTGATGGGCATGCATTTCTGTAAGAATGTGCTTTCTTAGATTGC
TAAATAAAGTCCACAGGGTACCCCTCCCTCTTTTAGTCTTGCTCATTGGACCTAAGCCTGTGCT
GCAGATCAGCCCCCACAGAGGATTCCCAGGCCCTCTGTCTCATGGCCGCCCTGCAGGTAATTGA
GGGCAGTTACTCTCTTCCCAGGCAGTTCCTGCGACTGCCCGTCATATGTCATGACTTCAGATCC
ATTTCAAGCTGACTGAATGTTAAACAGGCAGAACCCTGGAAGTCAAGGGACTGTCTTCATCATA
CATGTAGAGAGGTGTGTGGACATTGAAGTGCTAAGTTTTCTCAAAAATATATTCAAGATATATG
TTTATTCTATATTGTAAATTTCAATAAATAAACAAATAAACAAGTGAATAAACTAAGAA

hide sequence

RefSeq Acc Id:

XM_017594343 ⟹ XP_017449832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	75,919,350 - 76,359,667 (+)	NCBI
mRatBN7.2	6	70,184,105 - 70,624,369 (+)	NCBI
Rnor_6.0	6	73,553,111 - 73,991,992 (+)	NCBI

Sequence:

show sequence

CTCCACTGGAAATGCAGCAAGGATTCCTAGCACATCCCAGTTGCCATAGCAACAGCAGCCTTTC
CCATAATGAGCTGCATCATCTGAACTGATGTCACAGCATCATGCAGCAGGTCAAACAAGGCATC
TCCTAGTATTGCATCCTCCAGATGTGCTGTAAACATCAAAAGGAGACGCTGGGAGCAGGAGATG
CTGTTTTGGAAAGAAGTAAGGCTTAGATTTCTCCATGTTAACCATGAGCGTGACACTTTCCCCA
CTGAGGTCACAGGGCCCAGATCCCATGGCGACGGATGCTTCACCCATGGCCATCAACATGACAC
CCACTGTGGAGCAGGAGGAAGGAGAGGGAGAGGAAGCCGTGAAGGCCATAGACGCTGAGCAGCA
GTATGGAAAGCCACCTCCGCTCCACACAGCAGCCGACTGGAAGATTGTCCTGCACTTACCTGAG
ATTGAGACCTGGCTCCGGATGACCTCAGAGAGGGTCCGTGACCTGACCTACTCAGTCCAGCAGG
ATGCAGACAGCAAGCATGTGGATGTGCATCTAGTTCAGCTGAAGGACATTTGTGAGGATATTTC
TGACCATGTGGAGCAGATCCATGCCCTCCTTGAGACGGAGTTCTCCCTAAAGCTGCTGTCCTAC
TCGGTCAACGTCATCGTAGACATCCACGCAGTACAGCTGCTCTGGCACCAGCTCCGCGTATCCG
TGCTGGTCCTCCGGGAGCGCATCCTACAAGGTCTGCAGGACGCCAATGGCAACTACACCAGGCA
GACTGACATTCTGCAAGCGTTCTCTGAAGAAACAACGGAGGGCCGGCTTGATTCCCTCACAGAA
GTGGACGACTCAGGGCAGTTAACTATCAAATGTTCACAGGATTACTTGTCTCTGGATTGTGGCA
TTACCGCATTTGAACTCTCCGACTACAGTCCAAGTGAGGATCTGCTTGGTGGCCTGGGCGACAT
GACCACCAGCCAGGCCAAAACTAAATCTTTTGACTCTTGGAGCTACAGTGAGATGGAGAAAGAG
TTCCCTGAGCTTATCCGAAGCGTTGGGCTGCTTACAGTGGCCACCGAGCCTGTCCCTTCCAGCT
GTGGAGAAGCCAATGAGGATTCATCTCAAGCGTCCCTTTCAGACGATCACAAAGGTGAACACGG
GGAAGACGGTGCTCCCGTACCTGGACAGCAGCTGGACTCAACGGTGGGAATGTCTTCCTTAGAC
GGCACGCTGGCAAATGCTGCCGAACACCCTTCGGAGACAGCAAAACAAGACTCTACTTCCTCCC
CACAGCTTGGTACGAAGAAAACCCAGCCTGGTCCTTGTGAAATTACGACTCCCAAGAGATCCAT
CCGCGATTGCTTTAATTATAACGAGGACTCCCCCACACAGCCCACATTACCCAAAAGAGGGCTT
TTTCTAAAAGAAACTCAAAAGAATGAGCGCAAAGGCAGTGACAGGAAGGGGCAGGTGGTTGACT
TAAAGCCTGAACTGAGCAGAAGCACCCCTTCCCTGGTGGACCCCCCTGACAGATCGAAGCTCTG
CCTAGTGTTGCAGTCCTCCTACCCCAGCAGCCCTTCTGCTGCCAGCCAGTCCTATGAATGTTTG
CACAAGGTGGGGCTCGGCAATCTTGAAAACATAGTCAGAAGTCACATTAAAGAAATTTCTTCCA
GTCTGGGAAGGCTTACTGACTGCCATAAAGAGAAATTGCGACTGAAAAAGCCACACAAGACCTT
GGCCGAAGTGTCTCTGTGCAGAATCCCTAAACAGGGAGGCGGTTCAGGAAAGCGATCTGAGAGC
ACCGGGAGCTCAGCAGGGCCCAGCATGGTATCACCTGGAGCTCCCAAAGCCACGATGAGACCAG
AAACAGATTCTGCGTCTACAGCCTCAGGTGGCCTGTGCCACCAGAGAAATCGCAGTGGACAATT
GCCAGTGCAGTCGAAGGCCTCCAGTTCACCCCCTTGCAGTCACAGCAGTGAATCTTCTCTTGGC
TCAGATAGCATCAAATCCCCGGTTCCTCTTCTTTCAAAAAACAAAAGCCAAAAAAGCTCCCCAC
CTGCTCCATGTCACGCCACACAGAACGGTCAGGTGGTGGAGGCCTGGTACGGCTCTGATGAGTA
CCTAGCGCTGCCCTCTCACCTGAAGCAGACAGAGGTGTTAGCTCTCAAGCTGGAGAGCCTAACC
AAGCTCCTACCCCAGAAACCCAGAGGAGAGACCATCCAGGATATTGATGACTGGGAACTGTCTG
AAATGAATTCAGATTCCGAAATCTATCCAACATACCACATCAAGAAAAAACACACGAGACTGGG
CACAGTGTCTCCAAGCTCATCCAGCGACATAGCCTCATCTCTCGGGGAGAGCATTGAATCCGGG
CCCCTGAGTGACATTCTTTCTGACGAGGACTTATGTCTGCCCCTCTCCAGCATGAAAAAGTTCA
CTGACGAGAAATCAGAGAGACCTTCATCCTCCGAGAAGAACGAGAGCCATTCTGCAACAAGATC
AGCTTTGATTCAGAAACTAATGCACGATATTCAGCACCAAGAGAACTATGAAGCCATCTGGGAA
AGAATTGAGGGGTTTGTGAACAAGCTGGATGAATTCATTCAGTGGCTAAACGAAGCCATGGAGA
CCACCGAGAACTGGACTCCTCCTAAAGCCGAGACCGACAGCCTCCGGCTGTACCTGGAGACACA
CTTGAGTTTTAAGTTGAACGTAGACAGCCACTGTGCCCTCAAGGAAGCCGTGGAGGAAGAAGGA
CACCAACTTCTTGAGCTCGTTGTATCTCACAAAGCAGAAGGACTGAAGGACACGCTGAGGATGA
TTGCGAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTGGATTCTCAGAGC
CCTGGACACCATCAAAGCCGAGATACTGGCTACTGATGTGTCTGTGGAGGACGAGGAGGGGACG
GGAAGCCCCAAGGCCGAGGTTCAGCTCTGCCACCTGGAAACACAGAGAGACGCCGTGGAACAGA
TGTCCCTGAAGCTGTACAGCGAGCAGTACACCAGCGGGAGCAAGAGGAAGGAAGAGTTTGCCAA
CATGTCGAAAGCGCACGCGGAGGGAAGCAATGGGCTTCTGGACTTTGATTCAGAATATCAGGAG
CTCTGGGATTGGCTGATTGACATGGAGTCCCTCGTGATGGACAGCCACGACCTGATGATGTCAG
AGGAGCAGCAGCAGCATCTTTACAAGAGGTACAGTGTGGAAATGTCCATCAGGCATCTGAAAAA
GTCAGAGCTACTCAGCAAGGTTGAAGCTTTGAAGAAAGGTGGCCTTTCACTACCAGACGATATC
CTGGAAAAAGTGGATTCAATTAATGAAAAATGGGAGCTGCTTGGGAAAACCCTAAGAGAGAAGA
TACAGGACACAATAGCGGGGCACAGTGGGTCGGGCCCACGTGACCTGCTATCTCCTGAAAGCGG
AAGCCTGGTAAGGCAGCTGGAGGTCAGGATCAAAGAGCTGAAAAGGTGGCTAAGAGATACAGAG
CTTTTCATCTTCAATTCCTGTCTGAGACAAGAGAAGGAAGGAACAAGCGCCGAGAAACAGCTCC
AATACTTTAAGTCGCTCTGTCGTGAGATCAAGCAGCGGCGTCGAGGAGTGGCCTCCATTCTGAG
GTTGTGCCAGCACCTTCTGGATGACCGGGACACGTGCAACCTGAACGCAGATCACCAGCCCATG
CAGCTGATCATTGTAAACCTCGAGAGGCGGTGGGAGGCCATCGTCATGCAAGCTGTCCAGTGGC
AAACACGGTTACAAAAGAAGATGGGGAAGGAATCCGAGACTTTGAATGTGATTGATCCTGGCTT
GATGGACCTGAATGGAATGAGTGAGGATGCCCTGGAATGGGATGAAACAGACATAAGTAACAAA
CTCATTAGTGTGCATGAAGAATCAAACGACCTTGATCAAGACCCAGAGCCTATGCTACCCGCAG
TGAAGCTTGAAGAGACACACCACAAGGACTCTGGTTATGAAGAGGAGGCAGGTGACTGTGGAGG
GTCTCCGTATACCTCAAATATCACTGCACCTTCCAGCCCACACATTTACCAAGTGTACAGTCTT
CACAATGTGGAGCTCCACGAGGACAGCCACACTCCATTTCTGAAAAGCAGCCCTAAGTTCACAG
GCACAACACAGCCTACTGTTTTAACTAAGAGCCTCAGCAAGGACTCTTCCTTTTCATCTACAAA
ATCGTTACCAGACCTTCTAGGGGGTTCCGGTTTGGTGAGGCCTTACTCGTGTCACAGTGGAGAC
TTGAGCCAGAATTCAGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAACGAGATGCCGACCA
ACTCTGACATGAGCTTGTTCAGTATGGTAGACGGGTCCCCAAGTAACCCTGAAACGGAGCATCC
GGACCCACAAATGGGAGATGCAGCCACTGTGCTAGAGCAAAAGTTTAAAGACAACGGGGAAAGC
ATTAAGCTTTCAAGTGTCTCTCGGGCATCCGTCTCACCAGTGGGTTGTGTAAATGGAAAAGCAG
GGGATTTAAACAGTGTTACCAAACACACTGCTGATTGTTTGGGAGAAGAACTACAAGGAAAACA
TGACGTGTTTACATTTTATGATTACTCGTACCTCCAAGGCTCAAAACTCAAATTACCAATGATA
ATGAAACAGCCACAGAGTGAAAAGGCACACGTGGAGGATCCCCTTCTTGGTGGTTTTTATTTTG
ATAAAAAGTCCTGCAAAGCTAAACATCAGGCTTCAGAGTCACAACCAGATGCGCCTCCCCACGA
AAGGATTCTGGCAAGCGCGCCCCACGAGATGGGACGCAGCGCATACAAAAGTAGCGACATAGAG
AAGACATTCACGGGCATTCAGAGTGCCAGACAGCTCTCCCTTCTATCTCGTAGCTCATCTGTAG
AGTCCCTTTCTCCAGGGGGTGATTTGTTTGGATTGGGAATCTTTAAAAATGGCAGTGACAGCCT
CCAGCGGAGCACTTCTTTAGAAAGTTGGTTGACATCCTATAAGAGCAATGAGGATCTCTTTAGC
TGTCACAGCTCTGGGGACATAAGTGTGAGCAGTGGCTCAGTTGGTGAGCTGAGTAAGAGGACGT
TAGACCTTCTGAATCGCCTGGAGAATATACAGAGCCCCTCGGAGCAAAAGATCAAGCGGAGTGT
TTCTGACATGACTCTACAAAGCAGTTCCCAAAAGATGCCCTTCGCTGGCCAGATGTCACTGGAT
GTCGCATCCTCCATCAATGAAGACTCTCCGGCATCTCTTACAGAACTGAGTAGTAGCGATGAGC
TCTCTCTTTGCTCGGAGGACATTGTGTTACACAAAAACAAGATCCCAGAATCCAACGCATCATT
CAGGAAGCGCCTGAATCGCTCAGTGGCTGATGAGAGCGACGTCAATGTTAGCATGATTGTCAAT
GTGTCCTGCACCTCTGCTTGCACTGATGATGAAGATGACAGCGACCTCCTCTCCAGCTCCACTC
TCACCTTAACTGAAGAAGAGCTGTGCCTCAAAGATGAGGATGACGACTCCAGTATTGCAACAGA
TGATGAAATTTATGAAGAGAGCAACCTGATGTCTGGGCTGGACTACATAAAGAATGAACTGCAG
ACTTGGATAAGACCAAAACTTTCCTTGACGAGAGAAAAGAAACGGTCCGGTGTCACTGATGAAA
TAAAGGTCAATAAAGATGGGGGAGGCAATGAGAAGGCCAATCCCTCGGACACCCTGGACATCGA
GGCCCTTCTCAATGGCTCCATAAGATGTCTTTCCGAAAACAACGGGAATGGTAAGACTCCGCCC
AGAACTCATGGCTCAGGAACCAAAGGTGAAAATAAGAAAAGTACGTATGACGTTAGTAAGGATC
CGCACGTGGCTGACATGGAAAATGGCAATATTGAAAGTACCCCAGAAAGAGAAAGGGAGAAGCC
ACAAGGGCTTCCAGAGGTGTCAGAGAACCTTGCTTCAAATGTGAAAACGATTTCTGAATCTGAG
CTCAGCGAGTATGAAGCAGTAATGGATGGTTCTGAGGATTCAAGTGTTGCCAGAAAGGAATTTT
GTCCCCCAAATGACAGACATCCTCCACAGATGGGTCCCAAACTCCAGCATCCCGAAAATCAAAG
TGGCGACTGCAAGCCAGTCCAGAACCCTTGCCCGGGGCTACTGTCGGAAGCTGGCGTTGGAAGC
AGGCAAGACAGCAATGGACTAAAATCTTTGCCTAACGATGCACCAAGTGGGGCTAGAAAACCTG
CCGGTTGCTGCCTGCTGGAGCAGAATGAGACAGAGGAAAGTGCTTCTATCAGCAGCAACGCTTC
CTGTTGCAACTGCAAGCCAGATGTTTTCCATCAAAAAGATGATGAAGATTGTTCAGTACATGAC
TTTGTTAAGGAAATCATTGACATGGCATCAACAGCCCTAAAAAGTAAGTCACAGCCTGAAAGTG
AGGTGGCCGCACCCACATCACTAACCCAAATTAAGGAGAAGGTGTTAGAGCATTCGCACCGGCC
CATACACCTGAGAAAGGGGGACTTTTACTCCTACTTATCACTTTCGTCCCACGACAGTGACTGT
GGGGAGGTCACCAATTACATAGATGAGAAGAGCAGTACTCCATTGCCACCGGACGCTGTGGACT
CTGGCTTAGATGACAAGGAAGACATGGACTGCTTCTTTGAAGCTTGTGTTGAGGATGAGCCTGT
CAATGAGGAAGCTGGTCTCCCCGGTGCCCTTCCCAATGAATCAGCCATCGAGGATGGAGCAGAG
CAAAAGTCAGAACAAAAGACAGCCAGCTCTCCTGTGCTCAGTGACAAGACAGACCTGGTGCCTC
TTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCAAAGGAAGGAGATGATGTGTCTCACAC
TTCCCAGGGCTGTGCAGAGAGCACAGAGCCTACCACCCCCTCAGGAAAGGCCAATGCAGAGGGG
AGGTCAAGAATGCAAGGTGTATCAGCAACGCCAGAAGAAAACGCTGCTTCGGCCAAACCGAAAA
TTCAAGCTTTCTCTTTGAATGCAAAACAGCCAAAAGGCAAGGTTGCCATGAGGTATCCCAGCCC
CCAAACTCTAACCTGTAAAGAGAAGCTCGTAAACTTTCATGAAGATCGACACAGTAACATGCAT
AGGTAGAGTGTAATGCCCCCACGCATGGAAATCATCTCATTGAAAGATAGCCTGGCTGAAGCTC
AGGGCTAGCCCAATCCACCCTGGGCCGGTCTTGGGCTCCATCCTGTTATCACTGCCGCCTGTCA
CATTGACTTTCTGAAGACGAACCTTCCTTCCGAATGCAGTCTGTCCACGTGGGCCTCTCGACCT
GGATGTGTGCATTGCTTCTCTTAGGTGATCATCCTAGTTCCACAAAGCTGCTTGTTCTCCCGTG
GATTCCTGTCCCAAGCTACCTCTGGCAACCCTGTCTCTCCAGCAAGACTTCGGTTTTCCCTCCC
CCTCCTCCCCCCCTTAAAGCTCCGCGGCTCACCAAATTGATGGTCCATCAAACCCACTGTCTGG
AATGATACCCCTCCCATCAGTACTTGACCAATGTTATGTTTTGCTCTGAAAACTTTCGCTGTAT
TAGACCAATGTTTATTGAAAGAGATTTACCTAAAAAGCCCGCCCTTGATTTGGTTGCAGTATAG
AGGAGACACATTGATCCTTCTAACAAAATTAAGTGATGTCTGAAAGCGCCATTTTAATTATTTC
TTTTTAAATAATGATCTATGCAGCACTTCAAGAAACAACTATAACAGTGTTGTATCTTATAAAC
TGGTACATTCTACTATTAAGTTTGTTTTTGGTTTCTATGCTTCTTGAGGTGGTGATGAGAAAAA
TGGTTTTTTTTTTAAAACGGTGTGCCTTGCTGTATTACTTATAGCATTTATTAAAAAGCTGCTT
TCATGGTAAGATTACACTGGTTTGAAAGGAGGAAATAGCAAGGTTAAGATGCGTGCATAATTTC
TGTATATATGTATAAGCTAGTGCAAACACTGATGTATGACAGTATAAAATGCTTTCATGTTTGT
GATGTCCAGTGGTGTGGAATATAAGCCTTAAACCCGTTCGATTGCATGGTAATTAAAATTGGCA
TAATAAAAATAGCTTATTGGGGGAAAGGAAAATTAATGATCTCTTCTACCTGTGTTTACCAATT
TCTTTCATGTGGTTCTGGGAAAGAAAAAGAAACAAACCCCATATATTAGCTTCCAAAATATCCA
TATTGCACAGAAGGCTTAAGTTGCTTAGACTACAGACTGGGCCTGAAGACTTCATGATTTTCCA
AATTTTTCTGTTTCACTATAAACATCCGAAATAGCAAAGATTTCTTTCCCCTCCATCAACAGCA
TTTTATTCTGAATGTTTTTATTTCTACTTGTTAATGGTTTAAAGTTGTATTTGGAGATCTCTTA
CATGCCCTAATTTATTTTAAATATTTGAATGGGTTTGGTGGATGGTATAGAAAATTTAATTATT
ATTTTATTTAAACTACAGATTTCAGGTGTATTTATTTTGTTAAATATTCCATTTGGTCTTTTGG
TCTTTTTATGACTTGAAAGTTTCAGCTTTTAATTTATATCATAACTCCTACTAAAGTGCCTGAC
ACACAGTAGGTATTTCATAGAGTTTCCTGAATTAGAGTATTGGGTGGTTTATATATATATATAT
ATATGAGATTCCTGCATTAAAACTAGAAAAAGATGTGCAAAGTGAACCAGACACAGCATATTAT
CAGATTTCAAAAAGGAAAGAGAACATAGCCACAGAAATGACAATCATTCATTCAGTAGATTAGC
ATCTTTTGCCTGCAAGTCACCATTCTAGATTCAGGGAGAGCAGCTATGACCGATGCACTGCCTT
TGGAGGCTTCTGTGTTAGAGACAGAGTGACTGGCCACACAGATGACGCGCTATAGCACCCCACA
GATGAGGAAGAAAGCATGTATAGAGAAAGAGTCACAAAGAGAGCGATGGCAGGGAGGGACAGGG
GCCAGAGAAAGGCTAGGAGAGAGTGGAGGTTAGTGGTTAGTGGGGCTTTACTACAGGTGTGACA
GGAGAGAAGGCCAAATAAAGAGGACTGAAAGGTGTTTACGGAGTTGACGTGGAGCTTCTGTGTG
CTGTGTACTAGGTATAGAAGACCCAATAGCTTGCGTGGGGCTTTATTTACCCCATGATTGGAAC
TTTACTAGCACCATCCCAAGAACACTTAAATACCACACATCTGCAATTTCACAACCTTAATTAT
TTAGTGTGGGTTTTGCCTCTTCTAACCTTCGCTGCACATATTTTTAAATGGATGGCCTAGTCTA
GGCTTTTGGATATGTAGTGACTTCTTCCAAAGGAGTTTTAGAGAGACATCTAGTTATAGTGTTC
ACAAGGATTGCAGAGGGGAGATATTAGACATAACTGTGTGGTAGGGGGAAAGTAAGGGGGAAAA
TTAGCTAGAATCGAGGCAGTAACAGACTGCACAGGGATTGTAGCCTGAGATAGAGAAAGACAGA
TCATAGAGCCCAGAAAAGTATTTGAACATTTTTAGACCTCTGTTGGGATATGGCATTATTTTAT
ATACCAAGACAACCTGAATTCTCTTGGTCTGTGACTAATATTAAGTCTATGTCTATTGAAAAGA
CATTCAAAAAATTGAATAGGCCATGCTGGACTATTTGCCTCTTATGTGCTCATAAAGACTTAGA
ATTTGAAAATATTTATTAGCTCTCTACTTGACACTAACACCAAATTGACCAGGTTGACCTTGGG
GTTTATTAATGCCTTTTCCAGCCAGGAGAGATGGAGCCTCAGTCTCATGCCCTGTGTAGACACT
ACCGTCCCAGTCGCATTGGAAAACAGCTCATTTGCTCTGTATTGGTTTGACCAACCATATCTAC
ACACAACGATAGTTTGTTATTTGTTGAGGCCAACCGCCCCTCTGATGGGCATGCATTTCTGTAA
GAATGTGCTTTCTTAGATTGCTAAATAAAGTCCACAGGGTACCCCTCCCTCTTTTAGTCTTGCT
CATTGGACCTAAGCCTGTGCTGCAGATCAGCCCCCACAGAGGATTCCCAGGCCCTCTGTCTCAT
GGCCGCCCTGCAGGTAATTGAGGGCAGTTACTCTCTTCCCAGGCAGTTCCTGCGACTGCCCGTC
ATATGTCATGACTTCAGATCCATTTCAAGCTGACTGAATGTTAAACAGGCAGAACCCTGGAAGT
CAAGGGACTGTCTTCATCATACATGTAGAGAGGTGTGTGGACATTGAAGTGCTAAGTTTTCTCA
AAAATATATTCAAGATATATGTTTATTCTATATTGTAAATTTCAATAAATAAACAAATAAACAA
GTGAATAAACTAAGAA

hide sequence

RefSeq Acc Id:

XM_039112889 ⟹ XP_038968817

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	75,919,429 - 76,342,089 (+)	NCBI
mRatBN7.2	6	70,184,101 - 70,603,299 (+)	NCBI

RefSeq Acc Id:

XM_063262448 ⟹ XP_063118518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	76,011,183 - 76,359,667 (+)	NCBI

RefSeq Acc Id:

XM_063262449 ⟹ XP_063118519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	76,019,042 - 76,359,667 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_072140	(Get FASTA)	NCBI Sequence Viewer
	XP_017449831	(Get FASTA)	NCBI Sequence Viewer
	XP_017449832	(Get FASTA)	NCBI Sequence Viewer
	XP_038968817	(Get FASTA)	NCBI Sequence Viewer
	XP_063118518	(Get FASTA)	NCBI Sequence Viewer
	XP_063118519	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD39150	(Get FASTA)	NCBI Sequence Viewer
	EDM03393	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006562
	ENSRNOP00000091441
GenBank Protein	Q9WVC7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_072140 ⟸ NM_022618

- UniProtKB:

Q9WVC7 (UniProtKB/Swiss-Prot), A6HBI8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLTMSVTLSPLRSQGPDPMATDASPMAINMTPTVEQEEGEGEEAVKAIDAEQQYGKPPPLHTAA
DWKIVLHLPEIETWLRMTSERVRDLTYSVQQDADSKHVDVHLVQLKDICEDISDHVEQIHALLE
TEFSLKLLSYSVNVIVDIHAVQLLWHQLRVSVLVLRERILQGLQDANGNYTRQTDILQAFSEET
TEGRLDSLTEVDDSGQLTIKCSQDYLSLDCGITAFELSDYSPSEDLLGGLGDMTTSQAKTKSFD
SWSYSEMEKEFPELIRSVGLLTVATEPVPSSCGEANEDSSQASLSDDHKGEHGEDGAPVPGQQL
DSTVGMSSLDGTLANAAEHPSETAKQDSTSSPQLGAKKTQPGPCEITTPKRSIRDCFNYNEDSP
TQPTLPKRGLFLKETQKNERKGSDRKGQVVDLKPELSRSTPSLVDPPDRSKLCLVLQSSYPSSP
SAASQSYECLHKVGLGNLENIVRSHIKEISSSLGRLTDCHKEKLRLKKPHKTLAEVSLCRIPKQ
GGGSGKRSESTGSSAGPSMVSPGAPKATMRPETDSASTASGGLCHQRNRSGQLPVQSKASSSPP
CSHSSESSLGSDSIKSPVPLLSKNKSQKSSPPAPCHATQNGQVVEAWYGSDEYLALPSHLKQTE
VLALKLESLTKLLPQKPRGETIQDIDDWELSEMNSDSEIYPTYHIKKKHTRLGTVSPSSSSDIA
SSLGESIESGPLSDILSDEDLCLPLSSVKKFTDEKSERPSSSEKNESHSATRSALIQKLMHDIQ
HQENYEAIWERIEGFVNKLDEFIQWLNEAMETTENWTPPKAETDSLRLYLETHLSFKLNVDSHC
ALKEAVEEEGHQLLELVVSHKAGLKDTLRMIASQWKELQRQIKRQHSWILRALDTIKAEILATD
VSVEDEEGTGSPKAEVQLCHLETQRDAVEQMSLKLYSEQYTSGSKRKEEFANMSKAHAEGSNGL
LDFDSEYQELWDWLIDMESLVMDSHDLMMSEEQQQHLYKRYSVEMSIRHLKKSELLSKVEALKK
GGLSLPDDILEKVDSINEKWELLGKTLREKIQDTIAGHSGSGPRDLLSPESGSLVRQLEVRIKE
LKRWLRDTELFIFNSCLRQEKEGTSAEKQLQYFKSLCREIKQRRRGVASILRLCQHLLDDRDTC
NLNADHQPMQLIIVNLERRWEAIVMQAVQWQTRLQKKMGKESETLNVIDPGLMDLNGMSEDALE
WDETDISNKLISVHEESNDLDQDPEPMLPAVKLEETHHKDSGYEEEAGDCGGSPYTSNITAPSS
PHIYQVYSLHNVELHEDSHTPFLKSSPKFTGTTQPTVLTKSLSKDSSFSSTKSLPDLLGGSGLV
RPYSCHSGDLSQNSGSESGIVSEGDNEMPTNSDMSLFSMVDGSPSNPETEHPDPQMGDAANVLE
QKFKDNGESIKLSSVSRASVSPVGCVNGKAGDLNSVTKHTADCLGEELQGKHDVFTFYDYSYLQ
GSKLKLPMIMKQPQSEKAHVEDPLLGGFYFDKKSCKAKHQASESQPDAPPHERILASAPHEMGR
SAYKSSDIEKTFTGIQSARQLSLLSRSSSVESLSPGGDLFGLGIFKNGSDSLQRSTSLESWLTS
YKSNEDLFSCHSSGDISVSSGSVGELSKRTLDLLNRLENIQSPSEQKIKRSVSDMTLQSSSQKM
PFAGQMSLDVASSINEDSPASLTELSSSDELSLCSEDIVLHKNKIPESNASFRKRLNRSVADES
DVNVSMIVNVSCTSACTDDEDDSDLLSSSTLTLTEEELCLKDEDDDSSIATDDEIYEESNLMSG
LDYIKNELQTWIRPKLSLTREKKRSGVTDEIKVNKDGGGNEKANPSDTLDIEALLNGSIRCLSE
NNGNGKTPPRTHGSGTKGENKKSTYDVSKDPHVADMENGNIESTPEREREKPQGLPEVSENLAS
NVKTISESELSEYEAVMDGSEDSSVARKEFCPPNDRHPPQMGPKLQHPENQSGDCKPVQNPCPG
LLSEAGVGSRQDSNGLKSLPNDAPSGARKPAGCCLLEQNETEESASISSNASCCNCKPDVFHQK
DDEDCSVHDFVKEIIDMASTALKSKSQPESEVAAPTSLTQIKEKVLEHSHRPIHLRKGDFYSYL
SLSSHDSDCGEVTNYIDEKSSTPLPPDAVDSGLDDKEDMDCFFEACVEDEPVNEEAGLPGALPN
ESAIEDGAEQKSEQKTASSPVLSDKTDLVPLSGLSPQKGADDAKEGDDVSHTSQGCAESTEPTT
PSGKANAEGRSRMQGVSATPEENAASAKPKIQAFSLNAKQPKGKVAMRYPSPQTLTCKEKLVNF
HEDRHSNMHR

hide sequence

RefSeq Acc Id:	XP_017449832 ⟸ XM_017594343
- Peptide Label:	isoform X1
- UniProtKB:	Q9WVC7 (UniProtKB/Swiss-Prot), G3V6M0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLTMSVTLSPLRSQGPDPMATDASPMAINMTPTVEQEEGEGEEAVKAIDAEQQYGKPPPLHTAA DWKIVLHLPEIETWLRMTSERVRDLTYSVQQDADSKHVDVHLVQLKDICEDISDHVEQIHALLE TEFSLKLLSYSVNVIVDIHAVQLLWHQLRVSVLVLRERILQGLQDANGNYTRQTDILQAFSEET TEGRLDSLTEVDDSGQLTIKCSQDYLSLDCGITAFELSDYSPSEDLLGGLGDMTTSQAKTKSFD SWSYSEMEKEFPELIRSVGLLTVATEPVPSSCGEANEDSSQASLSDDHKGEHGEDGAPVPGQQL DSTVGMSSLDGTLANAAEHPSETAKQDSTSSPQLGTKKTQPGPCEITTPKRSIRDCFNYNEDSP TQPTLPKRGLFLKETQKNERKGSDRKGQVVDLKPELSRSTPSLVDPPDRSKLCLVLQSSYPSSP SAASQSYECLHKVGLGNLENIVRSHIKEISSSLGRLTDCHKEKLRLKKPHKTLAEVSLCRIPKQ GGGSGKRSESTGSSAGPSMVSPGAPKATMRPETDSASTASGGLCHQRNRSGQLPVQSKASSSPP CSHSSESSLGSDSIKSPVPLLSKNKSQKSSPPAPCHATQNGQVVEAWYGSDEYLALPSHLKQTE VLALKLESLTKLLPQKPRGETIQDIDDWELSEMNSDSEIYPTYHIKKKHTRLGTVSPSSSSDIA SSLGESIESGPLSDILSDEDLCLPLSSMKKFTDEKSERPSSSEKNESHSATRSALIQKLMHDIQ HQENYEAIWERIEGFVNKLDEFIQWLNEAMETTENWTPPKAETDSLRLYLETHLSFKLNVDSHC ALKEAVEEEGHQLLELVVSHKAEGLKDTLRMIASQWKELQRQIKRQHSWILRALDTIKAEILAT DVSVEDEEGTGSPKAEVQLCHLETQRDAVEQMSLKLYSEQYTSGSKRKEEFANMSKAHAEGSNG LLDFDSEYQELWDWLIDMESLVMDSHDLMMSEEQQQHLYKRYSVEMSIRHLKKSELLSKVEALK KGGLSLPDDILEKVDSINEKWELLGKTLREKIQDTIAGHSGSGPRDLLSPESGSLVRQLEVRIK ELKRWLRDTELFIFNSCLRQEKEGTSAEKQLQYFKSLCREIKQRRRGVASILRLCQHLLDDRDT CNLNADHQPMQLIIVNLERRWEAIVMQAVQWQTRLQKKMGKESETLNVIDPGLMDLNGMSEDAL EWDETDISNKLISVHEESNDLDQDPEPMLPAVKLEETHHKDSGYEEEAGDCGGSPYTSNITAPS SPHIYQVYSLHNVELHEDSHTPFLKSSPKFTGTTQPTVLTKSLSKDSSFSSTKSLPDLLGGSGL VRPYSCHSGDLSQNSGSESGIVSEGDNEMPTNSDMSLFSMVDGSPSNPETEHPDPQMGDAATVL EQKFKDNGESIKLSSVSRASVSPVGCVNGKAGDLNSVTKHTADCLGEELQGKHDVFTFYDYSYL QGSKLKLPMIMKQPQSEKAHVEDPLLGGFYFDKKSCKAKHQASESQPDAPPHERILASAPHEMG RSAYKSSDIEKTFTGIQSARQLSLLSRSSSVESLSPGGDLFGLGIFKNGSDSLQRSTSLESWLT SYKSNEDLFSCHSSGDISVSSGSVGELSKRTLDLLNRLENIQSPSEQKIKRSVSDMTLQSSSQK MPFAGQMSLDVASSINEDSPASLTELSSSDELSLCSEDIVLHKNKIPESNASFRKRLNRSVADE SDVNVSMIVNVSCTSACTDDEDDSDLLSSSTLTLTEEELCLKDEDDDSSIATDDEIYEESNLMS GLDYIKNELQTWIRPKLSLTREKKRSGVTDEIKVNKDGGGNEKANPSDTLDIEALLNGSIRCLS ENNGNGKTPPRTHGSGTKGENKKSTYDVSKDPHVADMENGNIESTPEREREKPQGLPEVSENLA SNVKTISESELSEYEAVMDGSEDSSVARKEFCPPNDRHPPQMGPKLQHPENQSGDCKPVQNPCP GLLSEAGVGSRQDSNGLKSLPNDAPSGARKPAGCCLLEQNETEESASISSNASCCNCKPDVFHQ KDDEDCSVHDFVKEIIDMASTALKSKSQPESEVAAPTSLTQIKEKVLEHSHRPIHLRKGDFYSY LSLSSHDSDCGEVTNYIDEKSSTPLPPDAVDSGLDDKEDMDCFFEACVEDEPVNEEAGLPGALP NESAIEDGAEQKSEQKTASSPVLSDKTDLVPLSGLSPQKGADDAKEGDDVSHTSQGCAESTEPT TPSGKANAEGRSRMQGVSATPEENAASAKPKIQAFSLNAKQPKGKVAMRYPSPQTLTCKEKLVN FHEDRHSNMHR hide sequence

RefSeq Acc Id:	XP_017449831 ⟸ XM_017594342
- Peptide Label:	isoform X1
- UniProtKB:	Q9WVC7 (UniProtKB/Swiss-Prot), G3V6M0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLTMSVTLSPLRSQGPDPMATDASPMAINMTPTVEQEEGEGEEAVKAIDAEQQYGKPPPLHTAA DWKIVLHLPEIETWLRMTSERVRDLTYSVQQDADSKHVDVHLVQLKDICEDISDHVEQIHALLE TEFSLKLLSYSVNVIVDIHAVQLLWHQLRVSVLVLRERILQGLQDANGNYTRQTDILQAFSEET TEGRLDSLTEVDDSGQLTIKCSQDYLSLDCGITAFELSDYSPSEDLLGGLGDMTTSQAKTKSFD SWSYSEMEKEFPELIRSVGLLTVATEPVPSSCGEANEDSSQASLSDDHKGEHGEDGAPVPGQQL DSTVGMSSLDGTLANAAEHPSETAKQDSTSSPQLGTKKTQPGPCEITTPKRSIRDCFNYNEDSP TQPTLPKRGLFLKETQKNERKGSDRKGQVVDLKPELSRSTPSLVDPPDRSKLCLVLQSSYPSSP SAASQSYECLHKVGLGNLENIVRSHIKEISSSLGRLTDCHKEKLRLKKPHKTLAEVSLCRIPKQ GGGSGKRSESTGSSAGPSMVSPGAPKATMRPETDSASTASGGLCHQRNRSGQLPVQSKASSSPP CSHSSESSLGSDSIKSPVPLLSKNKSQKSSPPAPCHATQNGQVVEAWYGSDEYLALPSHLKQTE VLALKLESLTKLLPQKPRGETIQDIDDWELSEMNSDSEIYPTYHIKKKHTRLGTVSPSSSSDIA SSLGESIESGPLSDILSDEDLCLPLSSMKKFTDEKSERPSSSEKNESHSATRSALIQKLMHDIQ HQENYEAIWERIEGFVNKLDEFIQWLNEAMETTENWTPPKAETDSLRLYLETHLSFKLNVDSHC ALKEAVEEEGHQLLELVVSHKAEGLKDTLRMIASQWKELQRQIKRQHSWILRALDTIKAEILAT DVSVEDEEGTGSPKAEVQLCHLETQRDAVEQMSLKLYSEQYTSGSKRKEEFANMSKAHAEGSNG LLDFDSEYQELWDWLIDMESLVMDSHDLMMSEEQQQHLYKRYSVEMSIRHLKKSELLSKVEALK KGGLSLPDDILEKVDSINEKWELLGKTLREKIQDTIAGHSGSGPRDLLSPESGSLVRQLEVRIK ELKRWLRDTELFIFNSCLRQEKEGTSAEKQLQYFKSLCREIKQRRRGVASILRLCQHLLDDRDT CNLNADHQPMQLIIVNLERRWEAIVMQAVQWQTRLQKKMGKESETLNVIDPGLMDLNGMSEDAL EWDETDISNKLISVHEESNDLDQDPEPMLPAVKLEETHHKDSGYEEEAGDCGGSPYTSNITAPS SPHIYQVYSLHNVELHEDSHTPFLKSSPKFTGTTQPTVLTKSLSKDSSFSSTKSLPDLLGGSGL VRPYSCHSGDLSQNSGSESGIVSEGDNEMPTNSDMSLFSMVDGSPSNPETEHPDPQMGDAATVL EQKFKDNGESIKLSSVSRASVSPVGCVNGKAGDLNSVTKHTADCLGEELQGKHDVFTFYDYSYL QGSKLKLPMIMKQPQSEKAHVEDPLLGGFYFDKKSCKAKHQASESQPDAPPHERILASAPHEMG RSAYKSSDIEKTFTGIQSARQLSLLSRSSSVESLSPGGDLFGLGIFKNGSDSLQRSTSLESWLT SYKSNEDLFSCHSSGDISVSSGSVGELSKRTLDLLNRLENIQSPSEQKIKRSVSDMTLQSSSQK MPFAGQMSLDVASSINEDSPASLTELSSSDELSLCSEDIVLHKNKIPESNASFRKRLNRSVADE SDVNVSMIVNVSCTSACTDDEDDSDLLSSSTLTLTEEELCLKDEDDDSSIATDDEIYEESNLMS GLDYIKNELQTWIRPKLSLTREKKRSGVTDEIKVNKDGGGNEKANPSDTLDIEALLNGSIRCLS ENNGNGKTPPRTHGSGTKGENKKSTYDVSKDPHVADMENGNIESTPEREREKPQGLPEVSENLA SNVKTISESELSEYEAVMDGSEDSSVARKEFCPPNDRHPPQMGPKLQHPENQSGDCKPVQNPCP GLLSEAGVGSRQDSNGLKSLPNDAPSGARKPAGCCLLEQNETEESASISSNASCCNCKPDVFHQ KDDEDCSVHDFVKEIIDMASTALKSKSQPESEVAAPTSLTQIKEKVLEHSHRPIHLRKGDFYSY LSLSSHDSDCGEVTNYIDEKSSTPLPPDAVDSGLDDKEDMDCFFEACVEDEPVNEEAGLPGALP NESAIEDGAEQKSEQKTASSPVLSDKTDLVPLSGLSPQKGADDAKEGDDVSHTSQGCAESTEPT TPSGKANAEGRSRMQGVSATPEENAASAKPKIQAFSLNAKQPKGKVAMRYPSPQTLTCKEKLVN FHEDRHSNMHR hide sequence

Ensembl Acc Id:

ENSRNOP00000006562 ⟸ ENSRNOT00000006562

RefSeq Acc Id:	XP_038968817 ⟸ XM_039112889
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GIZ8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000091441 ⟸ ENSRNOT00000111927

RefSeq Acc Id:	XP_063118518 ⟸ XM_063262448
- Peptide Label:	isoform X2
- UniProtKB:	Q9WVC7 (UniProtKB/Swiss-Prot), A6HBI8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118519 ⟸ XM_063262449
- Peptide Label:	isoform X2
- UniProtKB:	Q9WVC7 (UniProtKB/Swiss-Prot), A6HBI8 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9WVC7-F1-model_v2	AlphaFold	Q9WVC7	1-2314	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694593

Promoter ID:

EPDNEW_R5118

Type:

multiple initiation site

Name:

Akap6_1

Description:

A-kinase anchoring protein 6

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	73,553,192 - 73,553,252	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:69412	AgrOrtholog
BioCyc Gene	G2FUF-37567	BioCyc
Ensembl Genes	ENSRNOG00000004841	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000006562	ENTREZGENE
	ENSRNOT00000111927	ENTREZGENE
Gene3D-CATH	1.20.58.60	UniProtKB/Swiss-Prot
InterPro	Spectrin/alpha-actinin	UniProtKB/Swiss-Prot
	Spectrin_repeat	UniProtKB/Swiss-Prot
KEGG Report	rno:64553	UniProtKB/Swiss-Prot
NCBI Gene	64553	ENTREZGENE
PANTHER	A-KINASE ANCHOR PROTEIN 6	UniProtKB/Swiss-Prot
	PKA ANCHORING PROTEIN	UniProtKB/Swiss-Prot
Pfam	Spectrin	UniProtKB/Swiss-Prot
PhenoGen	Akap6	PhenoGen
RatGTEx	ENSRNOG00000004841	RatGTEx
SMART	SPEC	UniProtKB/Swiss-Prot
Superfamily-SCOP	Spectrin repeat	UniProtKB/Swiss-Prot
UniProt	A0A8I6GIZ8	ENTREZGENE, UniProtKB/TrEMBL
	A6HBI8	ENTREZGENE, UniProtKB/TrEMBL
	AKAP6_RAT	UniProtKB/Swiss-Prot
	G3V6M0	ENTREZGENE, UniProtKB/TrEMBL
	Q9WVC7	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Akap6	A-kinase anchoring protein 6	Akap6	A kinase (PRKA) anchor protein 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-06-10	Akap6	A kinase (PRKA) anchor protein 6			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_function	anchoring protein that binds to Pde4d at perinuclear regions in hypertrophic cardiomyocytes	68716
gene_function	anchoring protein that binds to Pde4d at perinuclear regions in hypertrophic cardiomyocytes	69370
gene_process	orients and sustains multi-component signaling complexes of protein kinase A and other enzymes	68716
gene_process	orients and sustains multi-component signaling complexes of protein kinase A and other enzymes	69370

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

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Imported Disease Annotations - CTD

RGD Manual Annotations